View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4903-Insertion-3 (Length: 370)
Name: NF4903-Insertion-3
Description: NF4903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4903-Insertion-3 |
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Alignment Details
Target: chr5 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 8 - 350
Target Start/End: Original strand, 18950190 - 18950531
Alignment:
| Q |
8 |
caaagaacattcaccatattgaggaagaacatcacgaatgagatggaattcatactctaagttatgtgcccaaacttcacggacaatgattggttttgat |
107 |
Q |
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| T |
18950190 |
caaagaacattcaccatattcaggaagaacatcacgaatgagatggaattcatactctaagttatgtgcccaaacttcacggacaatgattggttttgat |
18950289 |
T |
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| Q |
108 |
aactcttcactcagcaagcacgtttttgtcatgatcgtagcttgattggaattctgaaaaagaaagaaaactctacggcactttgatgtgcgatgagctt |
207 |
Q |
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| T |
18950290 |
aactcttcactcagcatgcacgtttttgtcatgatcgtagcttgattggaattctgaaaaagaaagaaaactctacggcactttgatgtgcgatgagctt |
18950389 |
T |
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| Q |
208 |
agaaaaagaatagttttatagtaaagtttaggttttgagtgagaaaaagttagattagggttagtttatatattaccgagcgtcaagtgtaacaaactaa |
307 |
Q |
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| T |
18950390 |
agaaaaagaatagtgttatagtaacgtttaggttttgagtgagaaaaagttagattaggtttagtttatatattaacgagcatgaagtgtaacaaactaa |
18950489 |
T |
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| Q |
308 |
taaggttttattttttgagaggatcttataaagatttgatgta |
350 |
Q |
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| T |
18950490 |
taaggttttattttttgagaggatctaat-aagatttgatgta |
18950531 |
T |
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