View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4903_high_1 (Length: 510)
Name: NF4903_high_1
Description: NF4903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4903_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 8 - 493
Target Start/End: Original strand, 18949709 - 18950194
Alignment:
| Q |
8 |
cgaagaatatttccaaaatgttcaaaaactctttcaaagtgtcaggcagatttcttcggatcaatatcttgaccaagtaagcaaaatcataagcaccatg |
107 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18949709 |
cgaataatatttccaaaatgttcaaaaactctttcaaagtgtcaggcagatttcttcggatcaatatcttgaccaagtaagcaaaatcataagcaccatg |
18949808 |
T |
|
| Q |
108 |
aaaagtcacccaagtcattgatttcttgaatataagtccagacttcaacatcagttcagcaaaacggaatgagtcgacaccttgagagacacaacgattg |
207 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18949809 |
aaaagtcacccaagtcattgatttcttgaacataagtccagacttcaacatcagttcagcaaaacggaatgagtcgacaccttgagagacacaacgattg |
18949908 |
T |
|
| Q |
208 |
aagtcaatcccttgacgacgaagcaagtcaatggagtccttgttgtgagggtcacgatcaacgttgaagtcacaaaagttgaattgccaaatgtagcgat |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
18949909 |
aagtcaatcccttgacgacgaagcaagtcaatggagtccttgttgtgagggtcacgctcaacgttgaagtcacaaaagttgaattgccaaatatagcgat |
18950008 |
T |
|
| Q |
308 |
tatcggtgtcaaaatcaggaagttgaccgcaatcatcgattaaagtaagaccaagttggatgagtttaagatcatcaacattaggcttcaagacgtatct |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
18950009 |
tatcggtgtcaaaatcaggaagttgaccgcaatcatcgattaaagtgagaccaagttggatgagtttaagatcatcaacattaggcttcaagacgcatct |
18950108 |
T |
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| Q |
408 |
gtagtaatcagagggttgaaggtggcgatggtcgacttttggtgtatggataactccaggaaattcggtgtctatagagaccaaag |
493 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
18950109 |
gtagtaatcagagggttgaaggtggcgatggtcgacttttggtgtatggataactccaggaaattcagtgtctatagagaccaaag |
18950194 |
T |
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