View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4903_low_6 (Length: 349)
Name: NF4903_low_6
Description: NF4903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4903_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 18 - 333
Target Start/End: Original strand, 44829351 - 44829665
Alignment:
| Q |
18 |
ttcctctcccaaaacttgatgatcgggactatagaacgtacacggtggacgattcattcttgaaaaaagaatatttcctccaattggtagtgattcgttt |
117 |
Q |
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| T |
44829351 |
ttcctctcccaaaacttgatgatcgggactatagaacgtacacggtggacgattcattcttgaaaaaagaatatttcctccaattggtagtgattcgttt |
44829450 |
T |
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| Q |
118 |
tttgatattactaacatggccttagaaatttgactttgaagattctctctattcttctgaagcttttcctgagaaaagataattaagattgactacatgg |
217 |
Q |
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| T |
44829451 |
tttgatattactaacatggccttagaaatttgactttgaagattctctctattcttctgaagcttttcctgagaaaagataattaagattgactacatgg |
44829550 |
T |
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| Q |
218 |
cttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctacnnnnnnnntcaagttgtgccaccaaaacaacaattacgtg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
44829551 |
cttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctac-aaaaaaatcaagttgtgccaccaaaacaacaattacgtg |
44829649 |
T |
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| Q |
318 |
aaagagaatgcttcat |
333 |
Q |
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|||||||||||||||| |
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| T |
44829650 |
aaagagaatgcttcat |
44829665 |
T |
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