View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4904_high_4 (Length: 305)
Name: NF4904_high_4
Description: NF4904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4904_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 31836626 - 31836342
Alignment:
| Q |
1 |
agagagaaagagattagggaagcttgagaacttttattaatttctcacaaatactacatagtgcaactagtacttatttatatgaactgctatgtaacaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31836626 |
agagagaaagagattagggaagcttgagaacttttattaatttctcacacacactacatagtgcaactagtacttatttatatgaactgctatgtaacaa |
31836527 |
T |
|
| Q |
101 |
attatcagttacactaactgaattactaactgtaaaaactgaattggtttcgtattacttacaacaccatcccttaatacaaaatcacaacaaaaatgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31836526 |
attatcagttacactaactgaattactaactgtaaaaactgaattggtttcgtattacttacaacaccatcccttaatacaaaatcacaacaaaaatgat |
31836427 |
T |
|
| Q |
201 |
acaactccaagttctcttcttagccttgcaaactggtcagtcttcaaagcctttgtcaaaacatcagcaacttgcttattggcag |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
31836426 |
acaactccaagttctcttcttagccttgcaaactggtcagtcttcaaagcctttgtcaaaacataagcaacttgcttattggcag |
31836342 |
T |
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