View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4905-Insertion-6 (Length: 259)
Name: NF4905-Insertion-6
Description: NF4905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4905-Insertion-6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 259
Target Start/End: Complemental strand, 16590577 - 16590326
Alignment:
| Q |
8 |
ttatcagctagtaatcattattcaacttcttgttattannnnnnncacttgtagaataattgttctttgatactttttgtttatatgtgattcttgtgag |
107 |
Q |
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| T |
16590577 |
ttatcagcaagtaagcattattcaacttcttcttattatttttttcacttgtagaataattgttctttgatactttttgtttatatgtgattcttgtgag |
16590478 |
T |
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| Q |
108 |
tacacactacacaattttgttgatgctactgttctaagttcttagtacggtttgaaaatcttgttttcttaatttgttgtgtcacggggatttccttttg |
207 |
Q |
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||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
16590477 |
tacacactacacagttttgttgatgctactattctaagttcttagtacggtttgaaaatcttgttttcttaatttgttgtgtcacggggattttcttttg |
16590378 |
T |
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| Q |
208 |
aataagtcatgttaggataatttaacttattgctatgtcctatgtacctttg |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16590377 |
aataagtcatgttaggataatttaacttattgctatgtcctatgtacctttg |
16590326 |
T |
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