View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4907_low_3 (Length: 376)
Name: NF4907_low_3
Description: NF4907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4907_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 2 - 353
Target Start/End: Complemental strand, 46072731 - 46072380
Alignment:
| Q |
2 |
gaatggtggcgtgccattttgggacaggaacgctgcaggtaagtctgatgaatctgtcagtaaggagcctgaagtgtgtgaagatagaagaaggccacgg |
101 |
Q |
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| T |
46072731 |
gaatggtggcgtgccattttgggacaggaacgctgctggtaagtctgatgaatctgtcagtaaggagcctgaagtgtgtgaagatagaagaaggccacgg |
46072632 |
T |
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| Q |
102 |
cagaaaagaacacaggaggaaaaagagaacaacagacgctgattaatatccgtttgttacccttttcggctacatttgtatatataccaaaaaagccaca |
201 |
Q |
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| T |
46072631 |
cagaaaagaacacaggaggaaaaagagaacaacagacgctgattaatatccgtttgttacccttttcggctacatttgtatatataccaaaaaggccaca |
46072532 |
T |
|
| Q |
202 |
aggagttagtgtaatgtttagaaaattgatcttcctttgcctgcagcagataaacaaggacatagatgaattgcattgannnnnnngggttcttataact |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
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| T |
46072531 |
aggagttagtgtaatgtttagaaaattgatcttcctttgcctgcagcagataaacagggacatagatgaattgcattgatttttttgggttcttataact |
46072432 |
T |
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| Q |
302 |
cgtttggttaaccattttgtgctcaaggtgtcggatgaaatgaagaagatgc |
353 |
Q |
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| T |
46072431 |
cgtttggttaaccattttgtgctcaaggtgtcagatgaaatgaagaagatgc |
46072380 |
T |
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