View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4907_low_9 (Length: 248)
Name: NF4907_low_9
Description: NF4907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4907_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 45625816 - 45625587
Alignment:
| Q |
1 |
tatgaacgatccctcacgttcaatgttgagtgcttcctggggttcattcttctcatcttcacctggaaattctaacttgtagattaaatgggtgtggctt |
100 |
Q |
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| T |
45625816 |
tatgaacgatccctcacgttcaatgttgattgcttcctggggttcattcttctcatcttcacctggaaattctaacttgtagattaaatgggtgtggctt |
45625717 |
T |
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| Q |
101 |
cttttcccactctctgctttgtgccttaaaatgcggtatatgccttctcccaatgctctggcatcactagtatgtctctttcctctactcttagtttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45625716 |
cttttcccactctctgctttgtgccttaaaatgcggtatatgccttctcccaatgctctggcatcactagtatgtctctttcctctactcttagtttcat |
45625617 |
T |
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| Q |
201 |
actctcctgccaatccattcatagaaagat |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
45625616 |
actctcctgccaatccattcatagaaagat |
45625587 |
T |
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