View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4908_low_68 (Length: 249)
Name: NF4908_low_68
Description: NF4908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4908_low_68 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 47127990 - 47127760
Alignment:
| Q |
1 |
tcttgaaagtgataagctctatatattagatcatcatgatgctttgatgccatacctaagtagaataaactctaccaacaccaagacttatgccactaga |
100 |
Q |
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| T |
47127990 |
tcttgaaagtgataagctctatatattagatcatcatgatgctttgatgccatacctaagtagaataaactctaccaacaccaagacttatgccaccaga |
47127891 |
T |
|
| Q |
101 |
acactcctatttctacaagatgatggcacattgaagccactggctattgaattaagcttacctcatccacaaggtgaacaacatggagctgtcagtaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47127890 |
acactcctatttctacaagatgatggcacattgaagccactggctattgaattaagcttacctcatccacaaggtgaacaacatggagctgtcagtaaag |
47127791 |
T |
|
| Q |
201 |
ttttcactccatcacatgaaggagtagcagc |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
47127790 |
ttttcactccatcacatgaaggagtagcagc |
47127760 |
T |
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