View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4910_high_49 (Length: 210)
Name: NF4910_high_49
Description: NF4910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4910_high_49 |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 11773805 - 11773984
Alignment:
| Q |
20 |
gaacaaaggtaaacattgttagctcataaacttcttgtttatcaatttcttatttttt-gcatgtgttcttttagnnnnnnnngtttgaaagtttgattg |
118 |
Q |
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| T |
11773805 |
gaacaaaggtaaacattgttagctcataaacttcttgtttatcaatttcttatttttttgcatgtgttcttttagttttttttgtttgaaagtttgattg |
11773904 |
T |
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| Q |
119 |
caatttcacaattttatgataattcaatatttcacacccttttccacattcacaaattttggagcattcaagtttatttt |
198 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11773905 |
caatttcacaatttcatgataattcaatatttcacacccttttccacattcacaaattttggagcattcaagtttatttt |
11773984 |
T |
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