View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4910_high_8 (Length: 460)
Name: NF4910_high_8
Description: NF4910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4910_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 22 - 442
Target Start/End: Original strand, 41732206 - 41732626
Alignment:
| Q |
22 |
acataacatacagtttacatagtagtttgtatttttctggtttcgacatttattccaatggaccagtgcctaaagacaatgtctcattagaaagagacaa |
121 |
Q |
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| T |
41732206 |
acataacatacagtttacatagtagtttgtatttttctggtttcgacatttattccaatggaccagtgcctaaagacaatgtctcattagaaagagacaa |
41732305 |
T |
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| Q |
122 |
ttagaaagagacaattgtgggcataccggtgaactgtttcctcatgccattcattttctttcagattacttgctatctaaaaacatgttttggtgtgttt |
221 |
Q |
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| T |
41732306 |
ttagaaagagacaattgtgggcataccggtgaactgtttcctcatgccattcattttctttcagattacttgctatctaaaaacatgttttggtgtgttt |
41732405 |
T |
|
| Q |
222 |
cttcacaaagagagatatataatctgtttcacgtgtttagaagctcaccttaataatgataatctcattgacatttttgttgggtgctctggtatgaagt |
321 |
Q |
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| T |
41732406 |
cttcacaaagagagatatataatctgtttcacgtgtttagaagctcaccttaataatgataatctcattgacatttttgttgggtgctctggtatgaagt |
41732505 |
T |
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| Q |
322 |
tattttaagctattgatcatagtttgtagtttgagcagcaactgagcaatctgggttcacaacggaatgtgaattaggatgaaatgcaattttcactagt |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41732506 |
tattttaagctattgatcatagtttgtagtttgagcagcaacggagcaatctgggttcacaacggaatgtgaattaggatgaaatgcaattttcactagt |
41732605 |
T |
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| Q |
422 |
taaccaatgactagtttcttg |
442 |
Q |
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| T |
41732606 |
taaccaatgactagtttcttg |
41732626 |
T |
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