View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4910_low_10 (Length: 424)

Name: NF4910_low_10
Description: NF4910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4910_low_10
NF4910_low_10
[»] chr4 (6 HSPs)
chr4 (126-311)||(6663656-6663841)
chr4 (141-309)||(6660096-6660264)
chr4 (141-311)||(19887941-19888110)
chr4 (16-148)||(6671072-6671207)
chr4 (142-263)||(31890159-31890276)
chr4 (173-255)||(43288064-43288146)
[»] chr2 (3 HSPs)
chr2 (142-311)||(1234885-1235054)
chr2 (129-255)||(9808249-9808373)
chr2 (173-248)||(8424689-8424764)
[»] chr5 (3 HSPs)
chr5 (144-311)||(25634768-25634935)
chr5 (124-311)||(25641284-25641473)
chr5 (142-266)||(34350970-34351091)
[»] chr3 (5 HSPs)
chr3 (16-152)||(42256511-42256650)
chr3 (16-152)||(19934931-19935070)
chr3 (204-253)||(9372054-9372103)
chr3 (309-375)||(53016806-53016872)
chr3 (204-253)||(14655081-14655130)
[»] chr1 (4 HSPs)
chr1 (146-283)||(29401691-29401828)
chr1 (306-424)||(24432443-24432561)
chr1 (173-255)||(43254327-43254409)
chr1 (309-415)||(29991303-29991409)
[»] chr6 (4 HSPs)
chr6 (306-424)||(17451492-17451610)
chr6 (170-235)||(17373348-17373414)
chr6 (173-253)||(2935965-2936045)
chr6 (309-374)||(5241533-5241598)
[»] chr7 (3 HSPs)
chr7 (142-307)||(38415179-38415344)
chr7 (173-255)||(32352252-32352334)
chr7 (304-372)||(12546436-12546504)
[»] chr8 (1 HSPs)
chr8 (163-253)||(609756-609846)
[»] scaffold0933 (1 HSPs)
scaffold0933 (127-191)||(1018-1083)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 126 - 311
Target Start/End: Original strand, 6663656 - 6663841
Alignment:
Q  126 gataaatccttaagattgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6663656 gataaatccttaagattgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataa 6663755  T
Q  226 acaagagagatatcaaataaacttatctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctccact 311  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  6663756 acaagagagatatcaagtaaacttatatgtgctatatattagtctatgatttggccatcgatacagttccatcattatcctccact 6663841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 141 - 309
Target Start/End: Original strand, 6660096 - 6660264
Alignment:
Q  141 ttgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatca 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  6660096 ttgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagaaaataaataagagagatatca 6660195  T
Q  241 aataaacttatctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctcca 309  Q
    | |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||  |||||||||    
T  6660196 agtaaacttatctgcgctatatattagtctatgatttggtcatcgatacagttccatcattatcctcca 6660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 311
Target Start/End: Original strand, 19887941 - 19888110
Alignment:
Q  141 ttgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatca 240  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19887941 ttgttgtaaaatatttacatagaattctatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatca 19888040  T
Q  241 aataaacttatctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctccact 311  Q
    | ||| ||||| |||||||||||||||||||||||||||||||| | |||| ||||||  |||| ||||||    
T  19888041 agtaatcttat-tgtgctatatattagtctatgacttggccatcaaaacaggtccatcattatcttccact 19888110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 6671072 - 6671207
Alignment:
Q  16 cctttgacatcgtaattggtactctacagccatctaatttagtttgtgtactttgatcaaaacaaccgcgaagttgtatctgagaattagggcacaaaca 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6671072 cctttgacatcgtaattggtactctaaagccatctaatttagtttgtgtactttgatcaaaacaaccgcgaagttgtatctgagaattagggcacaaaca 6671171  T
Q  116 aatttcatt--agat-aaatccttaagattgttgta 148  Q
    |||| ||||  |||| ||||||| ||||||||||||    
T  6671172 aattccattcgagataaaatcctcaagattgttgta 6671207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 31890276 - 31890159
Alignment:
Q  142 tgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaa 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||    
T  31890276 tgttgtaaaatatttacttagaattatatccaaataataatcaacatataaaaac----aataattaagtattaaagagaataaacaagagagatatcaa 31890181  T
Q  242 ataaacttatctgtgctatata 263  Q
     ||||||| |||||| ||||||    
T  31890180 gtaaacttttctgtgttatata 31890159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 43288146 - 43288064
Alignment:
Q  173 aaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataaacttatctgt 255  Q
    |||||||||||| |||||||| | ||  |  |||||| |||| ||| ||||||||||||| |||||||| |||||||||||||    
T  43288146 aaataataatcatcatataaataaaatcatcaattaaatatttaagggaataaacaagagggatatcaagtaaacttatctgt 43288064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 4e-79; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 1235054 - 1234885
Alignment:
Q  142 tgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaa 241  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1235054 tgttgtaaaatatttacatagaattctatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaa 1234955  T
Q  242 ataaacttatctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctccact 311  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  1234954 gtaaacttatctgtgctatatattagtctatgacttggccatcgatacaggtccatcgttatcttccact 1234885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 9808373 - 9808249
Alignment:
Q  129 aaatccttaagattgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaaca 228  Q
    ||||||||||||||||||||||| | | ||||| |||||| || | |||||||| |||||||||| |  || ||  ||||| ||||||||||||||||||    
T  9808373 aaatccttaagattgttgtaaaacagtgacata-aattatctcaagataataat-aacatataaatatgagcaactattaaatattaaagagaataaaca 9808276  T
Q  229 agagagatatcaaataaacttatctgt 255  Q
    |||||||||| |||||  |||||||||    
T  9808275 agagagatatgaaataggcttatctgt 9808249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 8424764 - 8424689
Alignment:
Q  173 aaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataaact 248  Q
    |||||||||||| |||| ||| | ||| |  |||||| |||| ||||||||||||||||| |||||||| ||||||    
T  8424764 aaataataatcatcatacaaataaaagcatgaattaaatattgaagagaataaacaagagggatatcaagtaaact 8424689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 144 - 311
Target Start/End: Original strand, 25634768 - 25634935
Alignment:
Q  144 ttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25634768 ttgtaaaatatttacatagaattacatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaagt 25634867  T
Q  244 aaacttatctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctccact 311  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  25634868 aaacttatatgtgctgtatattagtctatgacttggccatcgatacagttccatcattatcctccact 25634935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 124 - 311
Target Start/End: Original strand, 25641284 - 25641473
Alignment:
Q  124 tagataaatccttaagattgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaat 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25641284 tagataaatccttaagattgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtatcaaagagaat 25641383  T
Q  224 aaacaagagagatatcaaataaactta--tctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctccact 311  Q
    |||||||||| ||||||| ||||||||  | |||||| | |||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  25641384 aaacaagagaaatatcaagtaaacttatttttgtgctgtgtattagtctatgacttggccatcgatgcagttccatcattatcctccact 25641473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 34351091 - 34350970
Alignment:
Q  142 tgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaa 241  Q
    |||||||||||||| | ||| |||||| |||||||||||||||||| || ||||  |||||||||||| |||| ||||||||||| ||||||||||||||    
T  34351091 tgttgtaaaatattgatataaaattatctccaaataataatcaacacat-aaaatgagaaataattaaatattgaagagaataaa-aagagagatatcaa 34350994  T
Q  242 ataaacttatctgtgctatatatta 266  Q
    || |||||||| |||||||||||||    
T  34350993 at-aacttatcagtgctatatatta 34350970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 42256511 - 42256650
Alignment:
Q  16 cctttgacatcgtaattggtactctacagccatctaatttagtttgtgtactttgatcaaaacaaccgcgaagttgtatctgagaattagggcacaaaca 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42256511 cctttgacatcgtaattggtactctaaagccatctaatttagtttgtgtactttgatcaaaacaaccgcgaagttgtatctgagaattagggcacaaaca 42256610  T
Q  116 aatttcatt---agataaatccttaagattgttgtaaaat 152  Q
    |||||||||   |||||||||||||||||||||| |||||    
T  42256611 aatttcattagaagataaatccttaagattgttgaaaaat 42256650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 19934931 - 19935070
Alignment:
Q  16 cctttgacatcgtaattggtactctacagccatctaatttagtttgtgtactttgatcaaaacaaccgcgaagttgtatctgagaattagggcacaaaca 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  19934931 cctttgacatcgtaattggtactctaaagccatctaatttagtttgtgtactttgatcaaaacaaccgcgaagttgtatcttataattagggcacaaaca 19935030  T
Q  116 aatttcatt---agataaatccttaagattgttgtaaaat 152  Q
    |||||||||   ||||||||| |||||||||||| |||||    
T  19935031 aatttcattagaagataaatctttaagattgttgaaaaat 19935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 9372054 - 9372103
Alignment:
Q  204 aattaagtattaaagagaataaacaagagagatatcaaataaacttatct 253  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  9372054 aattaagtattaaagagaataaacaagagggataacaagtaaacttatct 9372103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 375
Target Start/End: Complemental strand, 53016872 - 53016806
Alignment:
Q  309 acttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatacaggttctt 375  Q
    |||||||||||| | |||||||||||||||||||||  ||||  |||||||||| || |||||||||    
T  53016872 acttccactcctctctttactaaccctgatgttgacctttttcctagtgacacacatgcaggttctt 53016806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 14655130 - 14655081
Alignment:
Q  204 aattaagtattaaagagaataaacaagagagatatcaaataaacttatct 253  Q
    |||||| ||||||| ||||| ||||||||||||| ||| |||||||||||    
T  14655130 aattaaatattaaatagaattaacaagagagataacaagtaaacttatct 14655081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 5e-60; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 146 - 283
Target Start/End: Original strand, 29401691 - 29401828
Alignment:
Q  146 gtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataa 245  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  29401691 gtaaaatatttacatagaattatatcccaataataatcaacatataaaaacaagaaataattaagtatcaaagagaataaacaagaaagatatcaagtaa 29401790  T
Q  246 acttatctgtgctatatattagtctatgacttggccat 283  Q
    | ||||||||||||||||||||||||||||||||||||    
T  29401791 atttatctgtgctatatattagtctatgacttggccat 29401828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 306 - 424
Target Start/End: Original strand, 24432443 - 24432561
Alignment:
Q  306 tccacttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatacaggttcttctagtgagctctcttccccttccgatgttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  24432443 tccacttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatgcaggttcttctagtgagctctcttccccttccgatgttc 24432542  T
Q  406 catccacttcaaatgatga 424  Q
    |||||||||||||||||||    
T  24432543 catccacttcaaatgatga 24432561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 43254409 - 43254327
Alignment:
Q  173 aaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataaacttatctgt 255  Q
    |||||||||||| |||||||| | ||  |  |||||| |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  43254409 aaataataatcatcatataaataaaatcatcaattaaatatttaagggaataaacaagagggatatcaaataaacttatctgt 43254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 415
Target Start/End: Original strand, 29991303 - 29991409
Alignment:
Q  309 acttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatacaggttcttctagtgagctctcttccccttccgatgttgcat 408  Q
    |||||||||||||| ||||| ||||  |||||||||  ||||  |||| ||||| || |||||| ||||||||||||  |  ||||||||||||||  ||    
T  29991303 acttccactcctttctttacgaacctcgatgttgacctttttcctagtaacacacatgcaggtttttctagtgagcttccaaccccttccgatgttcaat 29991402  T
Q  409 ccacttc 415  Q
    |||||||    
T  29991403 ccacttc 29991409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 7e-56; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 306 - 424
Target Start/End: Original strand, 17451492 - 17451610
Alignment:
Q  306 tccacttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatacaggttcttctagtgagctctcttccccttccgatgttg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  17451492 tccacttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatgcaggttcttctagtgagctctcttccccttccgatgttc 17451591  T
Q  406 catccacttcaaatgatga 424  Q
    |||||||||||||||||||    
T  17451592 catccacttcaaatgatga 17451610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 17373414 - 17373348
Alignment:
Q  170 tccaaataataatcaacatataaaaacaag-aaataattaagtattaaagagaataaacaagagaga 235  Q
    |||||||| |||||||||||||||||  || ||| |||||| |||||||||||||||||||||||||    
T  17373414 tccaaatagtaatcaacatataaaaatgagcaaacaattaaatattaaagagaataaacaagagaga 17373348  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 2935965 - 2936045
Alignment:
Q  173 aaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataaacttatct 253  Q
    ||||||||||||| ||||||| | |||||  ||| || |||||||||||||||||||||| |||| ||| ||| |||||||    
T  2935965 aaataataatcaatatataaataaaagaatcaataaaatattaaagagaataaacaagagggataacaattaatcttatct 2936045  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 5241598 - 5241533
Alignment:
Q  309 acttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatacaggttct 374  Q
    |||||||||||| | |||||||||||||||||||||  ||||  |||||||||  || ||||||||    
T  5241598 acttccactcctctctttactaaccctgatgttgacctttttcctagtgacacgcatgcaggttct 5241533  T

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Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 307
Target Start/End: Complemental strand, 38415344 - 38415179
Alignment:
Q  142 tgttgtaaaatatttacatagaattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaa 241  Q
    ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||  ||||||| |||| ||||||| ||||| |||||||||||||||||    
T  38415344 tgttgtaaaattttgacataaaattatttccaaataataatcaacatataaaaatgagaaatagttaaatattaaaaagaatcaacaagagagatatcaa 38415245  T
Q  242 ataaacttatctgtgctatatattagtctatgacttggccatcgatacagttccatcgctatcctc 307  Q
     |||| |||||| | |||||||||| | |||||||| |||||| | ||| |||||||  |||||||    
T  38415244 gtaaatttatctttactatatattattgtatgacttagccatccacacaattccatcaatatcctc 38415179  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 32352252 - 32352334
Alignment:
Q  173 aaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataaacttatctgt 255  Q
    |||||||||||| |||||||| | ||  |  |||||| |||| ||| ||||||||||||| |||||||| |||||||||||||    
T  32352252 aaataataatcatcatataaataaaatcatcaattaaatatttaagcgaataaacaagagggatatcaagtaaacttatctgt 32352334  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 372
Target Start/End: Original strand, 12546436 - 12546504
Alignment:
Q  304 cctccacttccactcctttatttactaaccctgatgttgactattttaatagtgacacatatacaggtt 372  Q
    |||| |||||||||||| | ||||||||||| ||||| | |||||||  ||||||||| ||| ||||||    
T  12546436 cctcaacttccactcctctttttactaaccccgatgtcggctattttcctagtgacacgtatgcaggtt 12546504  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 609756 - 609846
Alignment:
Q  163 aattatatccaaataataatcaacatataaaaacaagaaataattaagtattaaagagaataaacaagagagatatcaaataaacttatct 253  Q
    |||||| || |||||||||||| |||||||| | ||| |  | || | |||||||||||||||||||||| |||| |||||||||||||||    
T  609756 aattatctctaaataataatcatcatataaataaaagcatcagttgaatattaaagagaataaacaagagggataacaaataaacttatct 609846  T

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Target: scaffold0933 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 1083 - 1018
Alignment:
Q  127 ataaatccttaagattgttgtaaaatatttacata-gaattatatccaaataataatcaacatata 191  Q
    ||||||| ||||||||||||||||||||| | ||| ||||||| |  |||||||||||||||||||    
T  1083 ataaatctttaagattgttgtaaaatattgatatatgaattatctttaaataataatcaacatata 1018  T

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