View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4910_low_36 (Length: 258)
Name: NF4910_low_36
Description: NF4910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4910_low_36 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 38723353 - 38723589
Alignment:
| Q |
1 |
tatttacttataaatgagggttagtttggtaaatggcaatgagtattaacatttaatgtgtatctatatatttatgtgtgtatgaccttatatatattct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
38723353 |
tatttacttataaatgagggttagtttggtaaatggcaatgagcattaacatttaatgtgtatctatatatttatgtgtgtatgaccttata----ttct |
38723448 |
T |
|
| Q |
101 |
agtgcactgtcttgaaacaaatcgcatagtaatattatatactaatattagcattatggttccaagaaggtgtttccaccttattttgttggttctttca |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38723449 |
agtgcactgtcttgaaacaaatcgtatagtaatattatatactaatattagcattatggttccaagaaggtgtttccaccttattttgttggttctttca |
38723548 |
T |
|
| Q |
201 |
tgtttatgcttcagctgcagatcagaaatggagtctgattt |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
38723549 |
tgtttatgcttcagctgcagatcagaaatggagtctgattt |
38723589 |
T |
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