View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4911-Insertion-6 (Length: 320)
Name: NF4911-Insertion-6
Description: NF4911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4911-Insertion-6 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 8 - 284
Target Start/End: Complemental strand, 32343912 - 32343642
Alignment:
| Q |
8 |
gatatttcatcccatcatgtttgaaatgagaaaagattgtattcattgtgaggatgagagataaacacaagtcgaaggagtacactgaaagtacctcacc |
107 |
Q |
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| T |
32343912 |
gatatttcatcccatcatgtttgaaatgagaaaagattgtattcattgtgaggatgagaaataaacacaagtcgaaggagtacactgaaagtacctcacc |
32343813 |
T |
|
| Q |
108 |
cacagccaattcaatgatacacatacacttgacaattgttttccacactcatctcatctaaaaaacatgcttaaccatttctgaagcatttcgaaagcca |
207 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32343812 |
cacagccaattcaatgatacacatacacttggcaattgttttccacactcatctcatctaaaaaacatgcttaaccatttctgaagcatttcgaaagcca |
32343713 |
T |
|
| Q |
208 |
ctcaattaatactcaatgctcttaaatcatacacctccatgtccatctgcccattttgcaatattttcaagctttgg |
284 |
Q |
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|||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| |
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| T |
32343712 |
ctcaatcaatactcaatggtcttaaatcatacacct------ccatctgcccattttgcaatatttttaagttttgg |
32343642 |
T |
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