View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4911_low_5 (Length: 363)
Name: NF4911_low_5
Description: NF4911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4911_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 18 - 362
Target Start/End: Original strand, 28202709 - 28203054
Alignment:
| Q |
18 |
aattcgagtgtgtgccgttttcagttaagaatttatataattttaggtgtaaacagtgattttacttccttaattattattattttataagctgcttact |
117 |
Q |
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| T |
28202709 |
aattcgagtgtgtgccgttttcagttaagaatttatataattctaggtgtaaacaatgattttacttccttaattattattattttataagctgcttact |
28202808 |
T |
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| Q |
118 |
aaatgttgctatgaggtggtagcctatttttataagcactaattttatagtagcttgatcaacgttcaaggatcttcactatcgttcatgtctttctcat |
217 |
Q |
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| T |
28202809 |
aaatgttgctatgaggtggtagcatatttttataagcactaattttatagtagcttgatcaacgttcaaggatcttcactatcgttcatgtctttctcat |
28202908 |
T |
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| Q |
218 |
tacttcatagaatcgtattttctaagatatggtttccattagtaatggaaacacgccagatctgcttgaaaaagtaaatgtattttcgtaactaaaatta |
317 |
Q |
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| T |
28202909 |
tacttcatagaattgtattttctaagatatggtttccattagtaatggaaacacgccagatctgcttgaaaaagtaaatgtattttcataactaaaatta |
28203008 |
T |
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| Q |
318 |
cttcttgtagaaatattgtcattatg-tcgtgattttattattagt |
362 |
Q |
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| T |
28203009 |
cttcttgtagaaatactgtcattatgttcgtgattttatttttagt |
28203054 |
T |
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