View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4912-Insertion-3 (Length: 391)
Name: NF4912-Insertion-3
Description: NF4912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4912-Insertion-3 |
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Alignment Details
Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 390
Target Start/End: Complemental strand, 7226343 - 7225926
Alignment:
| Q |
8 |
ttctgaagttttatgcaacatatacatgtgcgtttatttaactagagaaactttgaaatcgtataaaatgtgctcggaaattaagtgtctgccgtcaaa- |
106 |
Q |
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| T |
7226343 |
ttctgaagttttatgcaaaatatacatgtgcgtttatttaactagagaaactttgaaatcgtataaaatgtgctcggaaattaagtgtctgccgtcaaat |
7226244 |
T |
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| Q |
107 |
------------gtttttctacatgcatatttccttcttatgggaaacagtgaaacaaataaa----------------------ggaagacaaaatctc |
172 |
Q |
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| T |
7226243 |
tcaaatgtcaaagtttttctacatgcatatttccttcttatgggaaacagtgaaacaaataaaaaaaaaacaaattccaaactaaggaagacaaaatctc |
7226144 |
T |
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| Q |
173 |
tggctgctgaatgacatatctaagattcaaa-aaaattaaagtcataaatatatgctnnnnnnnnngggacaatatcattgcttccagtttcagaaactg |
271 |
Q |
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| T |
7226143 |
tggctgctgaatgacatatctaagattcaaagaaaattaaagtcataaatatatgctaaaaaaaa-gggacaatatcattgcttccagtttcagaaactg |
7226045 |
T |
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| Q |
272 |
acaaaagaagaaacacagtctcacccaactctccacttttgttgtttgttgttgactaatttacctcataatttttccaacttttgttactcacatgtat |
371 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
7226044 |
acaaaagaagaaacacagtctcacccaactctccacttttgttgtttgttgttgactaatttacctcataacttttccaacttttgttactcacatgtat |
7225945 |
T |
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| Q |
372 |
ggcatccattagtgtatat |
390 |
Q |
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| T |
7225944 |
ggcatccattagtgtatat |
7225926 |
T |
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