View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4913-Insertion-5 (Length: 509)
Name: NF4913-Insertion-5
Description: NF4913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4913-Insertion-5 |
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Alignment Details
Target: chr1 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 58 - 508
Target Start/End: Complemental strand, 51149974 - 51149524
Alignment:
| Q |
58 |
atatatttgtaacattgcggttggttaatgtcaaatgatactgaaactccaatatcaaccaaatgttatccggttttatgaaggagaaagagggagagag |
157 |
Q |
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| T |
51149974 |
atatatttgtaacattgcggttggataatgtcaaatgacattaagactccaatatcaaccaaatgttatccgattttatgaaggagaaagagggagagag |
51149875 |
T |
|
| Q |
158 |
gatgtgacttgtgagtaaaaagaggagtcaaaggcaacagaggttatagtagagtcagtaaaaaccgttccaccccaccagaggatagataggaatagga |
257 |
Q |
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| T |
51149874 |
gatgtgacttgtgagtaaaaagaggagtcaaaggcaacagaggttatagtagagtcagtaaaaaccgttccaccccaccagaggatagataggaatagga |
51149775 |
T |
|
| Q |
258 |
tgatggtattgtgtcagtaaacgatgtccttatttattttctagtaannnnnnnnaccactaataaactctagtgtttgtcatgtaatgacagaataatc |
357 |
Q |
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| T |
51149774 |
tgatggtattgtgtcagtaaacgatgtccttatttattttctagtaattttttttaccactaataaactctagtgtttgtcatgtaatggcagaataatc |
51149675 |
T |
|
| Q |
358 |
gtgtgtttatgccatgaatgaacgaataaactaaattcggatttaagtgtgtgtggtgtgggttttaagttaacagagcaaaaaattgccagtgtgtcag |
457 |
Q |
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| T |
51149674 |
gtgtgtttatgccatgaatgaacgaataaactaaattcggatttaagtgtgtgtggtgtggggtttaagttaacagagcaaaaaattgccaatgtgtcag |
51149575 |
T |
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| Q |
458 |
cgtttacgaaaatgacggatttgtccctttaataagatcctttctggtccc |
508 |
Q |
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| T |
51149574 |
cgtttacgaaaatgacggatttgtccctttaataagatcctttctggtccc |
51149524 |
T |
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