View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4914_low_4 (Length: 373)
Name: NF4914_low_4
Description: NF4914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4914_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 41878558 - 41878224
Alignment:
| Q |
18 |
agaatgtgctggaagtaatataggttgagaattcttgtatttgctagaaaattctatgctacgtgacacagctatgcactgtcacgtgtaagtaataaga |
117 |
Q |
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| T |
41878558 |
agaatgtgctggaagtaatataggttgagaattcttgtatttgctagaaaattctatgctacgtgacacagctatgcactgtcacgtgtaagtaataaga |
41878459 |
T |
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| Q |
118 |
ttgatcatattaattaacatgttcattcattttctacacactatttgggtcttcttccttctcgagtagatagccttatcatatggataannnnnnnnnn |
217 |
Q |
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| T |
41878458 |
ttgatcatattaattaacatgttcattcattttctacacactatttgggtcttcttccttctcgagtagatagccttatcatatggtt-------ttttt |
41878366 |
T |
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| Q |
218 |
nnnnnnngtattacaccgatctatatattccttgagatggaattatgaccaatatctgtgagatatttgtaagatattttcatgtcaatgcatacaatat |
317 |
Q |
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| T |
41878365 |
ttggtttgtattacaccgatctatatattccttgagatggaattatgaccaatatctgtgagatatttgtaagatattttcatgtcaatgcatacaatat |
41878266 |
T |
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| Q |
318 |
ttgatnnnnnnntttatatttttagaagccacgtaagttcat |
359 |
Q |
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| T |
41878265 |
ttgataaaaaaatttatatttttagaagccacgtaagttcat |
41878224 |
T |
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