View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4915-Insertion-8 (Length: 85)
Name: NF4915-Insertion-8
Description: NF4915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4915-Insertion-8 |
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| [»] chr1 (2 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 70; Significance: 3e-32; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-32
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 29287455 - 29287532
Alignment:
| Q |
8 |
gtatcatggaacaaacgactgagaaccattctgtcctagcaagcacaaaactccgagtctcgtttctaacacacatct |
85 |
Q |
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| T |
29287455 |
gtatcatggaacaaacgagtgagaaccattatgtcctagcaagcacaaaactccgagtctcgtttctaacacacatct |
29287532 |
T |
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Target: chr1; HSP #2
Raw Score: 46; E-Value: 7e-18
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 35236168 - 35236241
Alignment:
| Q |
12 |
catggaacaaacgactgagaaccattctgtcctagcaagcacaaaactccgagtctcgtttctaacacacatct |
85 |
Q |
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||||||||||| | |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |
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| T |
35236168 |
catggaacaaatgggcgagaaccattctgtcccagcaagtacaaaactccgagtctcgtctctaacacacatct |
35236241 |
T |
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