View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4919-Insertion-3 (Length: 846)

Name: NF4919-Insertion-3
Description: NF4919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4919-Insertion-3
NF4919-Insertion-3
[»] chr2 (38 HSPs)
chr2 (7-354)||(11018135-11018466)
chr2 (502-846)||(11017235-11017597)
chr2 (471-630)||(41573405-41573564)
chr2 (502-640)||(24479154-24479292)
chr2 (454-640)||(30267005-30267192)
chr2 (454-640)||(31342627-31342814)
chr2 (517-640)||(15513669-15513792)
chr2 (454-640)||(44920960-44921146)
chr2 (502-632)||(7702439-7702569)
chr2 (517-633)||(7718194-7718310)
chr2 (478-599)||(26734791-26734911)
chr2 (736-813)||(44411668-44411745)
chr2 (508-640)||(22966525-22966659)
chr2 (546-640)||(40016593-40016687)
chr2 (661-777)||(43752121-43752237)
chr2 (661-767)||(6218969-6219075)
chr2 (661-767)||(41197402-41197508)
chr2 (661-767)||(45367799-45367905)
chr2 (734-813)||(9647856-9647935)
chr2 (734-810)||(38434906-38434986)
chr2 (717-767)||(18958909-18958959)
chr2 (678-767)||(1456232-1456321)
chr2 (661-777)||(3866064-3866180)
chr2 (661-777)||(12734691-12734807)
chr2 (661-777)||(25834673-25834789)
chr2 (718-769)||(11006727-11006778)
chr2 (661-801)||(11992282-11992424)
chr2 (736-767)||(12141546-12141577)
chr2 (663-777)||(2610580-2610694)
chr2 (727-777)||(11412713-11412763)
chr2 (728-761)||(14197404-14197437)
chr2 (481-605)||(15540237-15540361)
chr2 (684-777)||(18188772-18188865)
chr2 (736-777)||(19337099-19337140)
chr2 (734-767)||(23714508-23714541)
chr2 (734-767)||(24102180-24102213)
chr2 (661-762)||(24583806-24583907)
chr2 (772-813)||(37393455-37393496)
[»] chr5 (47 HSPs)
chr5 (375-609)||(42076080-42076309)
chr5 (453-604)||(37233070-37233221)
chr5 (454-640)||(17037545-17037732)
chr5 (520-621)||(40401987-40402088)
chr5 (541-641)||(9333560-9333660)
chr5 (454-640)||(5078975-5079162)
chr5 (541-640)||(9354388-9354487)
chr5 (375-514)||(40389892-40390033)
chr5 (518-621)||(19985016-19985119)
chr5 (546-640)||(7410826-7410920)
chr5 (550-640)||(31068971-31069060)
chr5 (661-766)||(43475243-43475348)
chr5 (526-622)||(10869457-10869552)
chr5 (518-638)||(23679445-23679565)
chr5 (518-638)||(23855246-23855366)
chr5 (718-814)||(37124520-37124618)
chr5 (526-640)||(30786269-30786383)
chr5 (560-633)||(12042195-12042268)
chr5 (579-640)||(18191886-18191947)
chr5 (469-538)||(18191824-18191895)
chr5 (661-777)||(24178502-24178618)
chr5 (661-777)||(38684959-38685075)
chr5 (705-813)||(6888945-6889057)
chr5 (453-539)||(10869759-10869846)
chr5 (661-777)||(4496376-4496492)
chr5 (659-767)||(15588712-15588820)
chr5 (671-767)||(31636104-31636200)
chr5 (661-767)||(1275266-1275372)
chr5 (684-813)||(4026532-4026664)
chr5 (736-777)||(14667755-14667796)
chr5 (661-766)||(20456776-20456881)
chr5 (661-777)||(1287753-1287869)
chr5 (661-777)||(7359434-7359549)
chr5 (717-789)||(12577078-12577149)
chr5 (661-777)||(15489666-15489782)
chr5 (737-810)||(41833832-41833907)
chr5 (662-777)||(14665706-14665821)
chr5 (692-767)||(16347583-16347658)
chr5 (717-776)||(33667209-33667268)
chr5 (717-767)||(18351138-18351188)
chr5 (662-756)||(42199299-42199393)
chr5 (718-767)||(27895-27944)
chr5 (736-777)||(79505-79546)
chr5 (727-813)||(219693-219783)
chr5 (661-762)||(1525651-1525752)
chr5 (706-767)||(15168794-15168855)
chr5 (734-779)||(37065519-37065564)
[»] chr6 (43 HSPs)
chr6 (471-634)||(23264425-23264588)
chr6 (470-621)||(4485493-4485644)
chr6 (454-638)||(14669257-14669442)
chr6 (458-640)||(12591835-12592018)
chr6 (454-638)||(17719634-17719819)
chr6 (517-640)||(16734807-16734930)
chr6 (461-640)||(34374827-34375011)
chr6 (517-640)||(11936742-11936865)
chr6 (517-640)||(15361717-15361840)
chr6 (526-641)||(29667899-29668016)
chr6 (454-640)||(6684096-6684289)
chr6 (517-630)||(11948722-11948835)
chr6 (661-777)||(5258322-5258438)
chr6 (454-609)||(10070688-10070843)
chr6 (517-640)||(23904328-23904450)
chr6 (717-783)||(21870303-21870369)
chr6 (736-813)||(31818490-31818565)
chr6 (684-841)||(2079264-2079425)
chr6 (548-640)||(9631161-9631253)
chr6 (551-640)||(15690440-15690529)
chr6 (545-605)||(2941043-2941103)
chr6 (717-813)||(8364528-8364624)
chr6 (734-813)||(6641656-6641739)
chr6 (470-640)||(6673550-6673716)
chr6 (735-777)||(14389415-14389457)
chr6 (483-605)||(27969858-27969980)
chr6 (661-767)||(30031258-30031364)
chr6 (503-640)||(1942571-1942708)
chr6 (532-625)||(30481218-30481311)
chr6 (705-777)||(21352055-21352127)
chr6 (662-758)||(30679417-30679513)
chr6 (661-777)||(32755913-32756029)
chr6 (546-605)||(7601338-7601396)
chr6 (662-777)||(28085368-28085483)
chr6 (661-768)||(31832033-31832140)
chr6 (661-767)||(9593880-9593986)
chr6 (561-623)||(10935800-10935862)
chr6 (469-555)||(30129611-30129697)
chr6 (717-758)||(5897480-5897521)
chr6 (650-763)||(6906990-6907103)
chr6 (727-813)||(12134141-12134231)
chr6 (384-429)||(12592048-12592092)
chr6 (669-761)||(24665818-24665911)
[»] chr8 (46 HSPs)
chr8 (385-640)||(6403595-6403849)
chr8 (375-637)||(5000684-5000948)
chr8 (465-640)||(31347351-31347525)
chr8 (454-638)||(19369821-19370006)
chr8 (454-638)||(19448452-19448637)
chr8 (454-638)||(19532439-19532624)
chr8 (454-640)||(25637646-25637832)
chr8 (465-640)||(5650866-5651043)
chr8 (502-640)||(6801790-6801928)
chr8 (539-640)||(29553631-29553732)
chr8 (661-813)||(10824338-10824490)
chr8 (454-640)||(5528745-5528932)
chr8 (717-812)||(29700233-29700328)
chr8 (517-640)||(45356087-45356210)
chr8 (546-640)||(28249079-28249173)
chr8 (736-813)||(36143321-36143398)
chr8 (465-640)||(17634393-17634569)
chr8 (454-638)||(18766921-18767106)
chr8 (517-640)||(25638809-25638932)
chr8 (518-640)||(29345433-29345556)
chr8 (518-604)||(6223439-6223525)
chr8 (717-767)||(9695633-9695683)
chr8 (747-813)||(33511312-33511378)
chr8 (691-767)||(2776433-2776509)
chr8 (660-813)||(10080080-10080235)
chr8 (661-777)||(36565415-36565531)
chr8 (711-767)||(41444550-41444606)
chr8 (736-813)||(44681288-44681369)
chr8 (502-633)||(14997630-14997761)
chr8 (741-813)||(45419191-45419265)
chr8 (727-789)||(18474200-18474262)
chr8 (508-605)||(31369072-31369169)
chr8 (718-766)||(12611538-12611586)
chr8 (661-777)||(18125165-18125281)
chr8 (661-777)||(36545141-36545257)
chr8 (661-777)||(40813316-40813432)
chr8 (717-777)||(42493536-42493596)
chr8 (684-813)||(16705714-16705847)
chr8 (734-777)||(25985511-25985554)
chr8 (727-765)||(7103274-7103312)
chr8 (665-767)||(12491316-12491418)
chr8 (661-767)||(39946859-39946965)
chr8 (718-801)||(44373740-44373827)
chr8 (685-758)||(6483268-6483341)
chr8 (736-777)||(13171898-13171939)
chr8 (661-777)||(36395123-36395240)
[»] chr3 (39 HSPs)
chr3 (470-640)||(26707861-26708031)
chr3 (525-638)||(16457314-16457427)
chr3 (470-595)||(26735681-26735806)
chr3 (454-640)||(1627857-1628045)
chr3 (454-619)||(2943126-2943291)
chr3 (537-640)||(1613208-1613311)
chr3 (454-640)||(7407665-7407852)
chr3 (517-638)||(13845996-13846117)
chr3 (546-640)||(2550168-2550262)
chr3 (571-640)||(27259474-27259543)
chr3 (659-813)||(36820133-36820289)
chr3 (518-602)||(36035329-36035413)
chr3 (517-640)||(1654578-1654701)
chr3 (454-640)||(5498480-5498668)
chr3 (546-640)||(9633446-9633540)
chr3 (661-767)||(41842685-41842791)
chr3 (661-769)||(47233770-47233878)
chr3 (718-767)||(31337757-31337806)
chr3 (711-775)||(26490309-26490373)
chr3 (454-625)||(35082993-35083171)
chr3 (736-813)||(39600930-39601011)
chr3 (661-813)||(42510190-42510341)
chr3 (661-767)||(51447884-51447990)
chr3 (735-801)||(55244266-55244332)
chr3 (692-777)||(35033138-35033223)
chr3 (661-777)||(22065-22180)
chr3 (503-632)||(2179935-2180066)
chr3 (661-777)||(5168824-5168940)
chr3 (508-604)||(27713405-27713501)
chr3 (727-779)||(38430838-38430890)
chr3 (717-777)||(49503784-49503844)
chr3 (661-764)||(19737002-19737105)
chr3 (661-764)||(19757905-19758008)
chr3 (717-776)||(50960863-50960922)
chr3 (736-796)||(54365225-54365287)
chr3 (717-767)||(54128380-54128430)
chr3 (736-777)||(34719321-34719362)
chr3 (727-780)||(39535680-39535733)
chr3 (724-753)||(44443441-44443470)
[»] chr4 (46 HSPs)
chr4 (383-572)||(48465443-48465633)
chr4 (465-595)||(21317485-21317612)
chr4 (466-640)||(24558918-24559093)
chr4 (454-638)||(1684863-1685048)
chr4 (454-638)||(1152048-1152233)
chr4 (454-640)||(47065945-47066132)
chr4 (546-640)||(4881073-4881167)
chr4 (517-640)||(43600269-43600392)
chr4 (564-635)||(48464047-48464118)
chr4 (465-605)||(37750913-37751053)
chr4 (517-621)||(21539247-21539350)
chr4 (662-777)||(54470199-54470314)
chr4 (546-640)||(4904144-4904238)
chr4 (663-777)||(37797844-37797958)
chr4 (662-766)||(22420889-22420993)
chr4 (711-766)||(42293473-42293528)
chr4 (734-801)||(43070015-43070082)
chr4 (517-640)||(53300353-53300476)
chr4 (717-775)||(31459024-31459082)
chr4 (684-777)||(41192828-41192921)
chr4 (718-767)||(49738835-49738884)
chr4 (727-813)||(51252701-51252789)
chr4 (661-777)||(436221-436337)
chr4 (661-777)||(31959988-31960104)
chr4 (661-777)||(48174267-48174383)
chr4 (661-777)||(52569689-52569805)
chr4 (661-777)||(53707786-53707902)
chr4 (742-813)||(10208990-10209061)
chr4 (662-777)||(27450354-27450469)
chr4 (734-813)||(45423571-45423650)
chr4 (705-763)||(42639238-42639296)
chr4 (582-639)||(26075290-26075347)
chr4 (684-777)||(33709916-33710009)
chr4 (661-777)||(4440845-4440961)
chr4 (734-810)||(30807549-30807625)
chr4 (671-767)||(35555831-35555927)
chr4 (661-777)||(43433916-43434032)
chr4 (717-777)||(50471518-50471578)
chr4 (684-767)||(38903917-38904000)
chr4 (727-777)||(28236175-28236225)
chr4 (717-767)||(30621434-30621484)
chr4 (711-777)||(44047572-44047638)
chr4 (567-640)||(26075222-26075295)
chr4 (517-574)||(27739750-27739807)
chr4 (727-764)||(46715612-46715649)
chr4 (717-762)||(49987435-49987480)
[»] chr7 (51 HSPs)
chr7 (454-638)||(9242395-9242580)
chr7 (518-640)||(30089737-30089859)
chr7 (470-590)||(26701083-26701201)
chr7 (502-640)||(3234329-3234467)
chr7 (502-640)||(26621051-26621189)
chr7 (510-640)||(26608507-26608637)
chr7 (518-605)||(16086524-16086611)
chr7 (517-640)||(4685378-4685501)
chr7 (719-813)||(30200195-30200289)
chr7 (662-813)||(33072906-33073059)
chr7 (546-639)||(26224982-26225075)
chr7 (517-640)||(20277335-20277458)
chr7 (546-640)||(10022126-10022220)
chr7 (717-767)||(38920796-38920846)
chr7 (650-767)||(1740803-1740920)
chr7 (661-801)||(38606969-38607112)
chr7 (661-777)||(12841449-12841565)
chr7 (661-777)||(13859182-13859298)
chr7 (661-808)||(27893725-27893871)
chr7 (661-777)||(43281666-43281782)
chr7 (661-777)||(45836654-45836770)
chr7 (662-777)||(19262609-19262723)
chr7 (668-766)||(12966025-12966123)
chr7 (661-767)||(39906544-39906650)
chr7 (717-777)||(42187462-42187522)
chr7 (660-813)||(48736072-48736229)
chr7 (546-621)||(26205419-26205494)
chr7 (518-625)||(26619080-26619186)
chr7 (656-767)||(40169651-40169762)
chr7 (727-777)||(42177255-42177305)
chr7 (661-767)||(46356030-46356136)
chr7 (692-777)||(2885927-2886012)
chr7 (548-605)||(16170308-16170365)
chr7 (692-777)||(35906406-35906491)
chr7 (665-777)||(6374860-6374972)
chr7 (717-777)||(27021922-27021982)
chr7 (661-777)||(29650376-29650492)
chr7 (661-777)||(31005215-31005331)
chr7 (717-777)||(36514437-36514497)
chr7 (717-777)||(43282400-43282460)
chr7 (717-777)||(47848666-47848726)
chr7 (736-767)||(26742145-26742176)
chr7 (700-767)||(28020966-28021033)
chr7 (721-813)||(40139153-40139246)
chr7 (661-767)||(31682776-31682882)
chr7 (686-768)||(36101964-36102046)
chr7 (661-777)||(35559167-35559284)
chr7 (736-777)||(36136756-36136797)
chr7 (661-777)||(37617936-37618053)
chr7 (717-766)||(41948519-41948568)
chr7 (692-777)||(49029268-49029353)
[»] chr1 (49 HSPs)
chr1 (454-638)||(12189956-12190139)
chr1 (454-640)||(51758755-51758942)
chr1 (524-605)||(3399659-3399740)
chr1 (502-632)||(39368599-39368730)
chr1 (546-640)||(16222780-16222874)
chr1 (517-640)||(28636905-28637028)
chr1 (541-633)||(897464-897555)
chr1 (661-777)||(4001629-4001745)
chr1 (661-777)||(15085926-15086042)
chr1 (669-766)||(40416374-40416471)
chr1 (560-640)||(5911682-5911762)
chr1 (661-777)||(8671910-8672026)
chr1 (661-777)||(32082919-32083035)
chr1 (669-777)||(51812517-51812625)
chr1 (546-633)||(13208621-13208708)
chr1 (554-640)||(15214329-15214415)
chr1 (465-640)||(18308150-18308327)
chr1 (661-767)||(51602058-51602164)
chr1 (684-777)||(43423711-43423804)
chr1 (661-777)||(1210737-1210853)
chr1 (661-777)||(2544591-2544707)
chr1 (717-777)||(3819086-3819146)
chr1 (662-766)||(14226004-14226108)
chr1 (691-767)||(32404730-32404806)
chr1 (661-777)||(34792523-34792639)
chr1 (733-812)||(4590774-4590853)
chr1 (684-767)||(48431603-48431686)
chr1 (464-640)||(17112927-17113107)
chr1 (736-777)||(1661422-1661463)
chr1 (717-766)||(5338727-5338776)
chr1 (661-813)||(35828724-35828880)
chr1 (717-766)||(38868885-38868934)
chr1 (661-777)||(696261-696377)
chr1 (561-605)||(1843989-1844033)
chr1 (705-761)||(7921843-7921899)
chr1 (665-777)||(8391764-8391876)
chr1 (663-767)||(13827746-13827850)
chr1 (561-621)||(15204615-15204675)
chr1 (705-764)||(13827935-13827994)
chr1 (734-777)||(16943167-16943210)
chr1 (577-640)||(37097375-37097438)
chr1 (375-429)||(39367970-39368025)
chr1 (663-777)||(30202306-30202420)
chr1 (705-778)||(52073680-52073754)
chr1 (734-767)||(4380015-4380048)
chr1 (727-780)||(8343098-8343151)
chr1 (718-767)||(17267927-17267976)
chr1 (661-766)||(36339977-36340082)
chr1 (712-753)||(37591028-37591069)
[»] scaffold0684 (1 HSPs)
scaffold0684 (454-638)||(658-843)
[»] scaffold0002 (1 HSPs)
scaffold0002 (469-609)||(446211-446350)
[»] scaffold0069 (1 HSPs)
scaffold0069 (454-633)||(40609-40789)
[»] scaffold0576 (1 HSPs)
scaffold0576 (517-640)||(6701-6824)
[»] scaffold0024 (1 HSPs)
scaffold0024 (661-777)||(82713-82829)
[»] scaffold0018 (2 HSPs)
scaffold0018 (717-783)||(44098-44164)
scaffold0018 (661-777)||(31460-31576)
[»] scaffold0570 (1 HSPs)
scaffold0570 (662-767)||(1123-1228)
[»] scaffold0007 (1 HSPs)
scaffold0007 (532-640)||(8747-8853)
[»] scaffold0325 (1 HSPs)
scaffold0325 (694-765)||(11802-11873)


Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-146; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 7 - 354
Target Start/End: Complemental strand, 11018466 - 11018135
Alignment:
Q  7 ataaataacatagcaatatctttcaaagaatgtttggattgtacaaattgctgcagtatttgacagttagaatatataatctattctcccaaagcaaaag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||                |||||||||||    
T  11018466 ataaataacatagcaatatctttcaaagaatgtttggattgtacaaattgctgcagtatttgacagtaagaat----------------caaagcaaaag 11018383  T
Q  107 tcctgcagaataccttttaccagaagcctacgcaagcaatccaactaaaacaaaataatgtacctacccaaaccaaaaaggccaattagataaaaatcct 206  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11018382 tcctgcagattaccttttaccagaagcctacgcaagcaatccaactaaaacaaaataatgtacctacccaaaccaaaaaggccaattagataaaattcct 11018283  T
Q  207 tcattgcaggtgcagttcattcatccatatgtataatgatgtatcattagcttaggctgcaaatagaatcacacttcatgattaaccaactagatgaaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  11018282 tcattgcaggtgcagttcattcatccatatgtataatgatgtatcattagcttaggctgcaaccagaatcacacttcatgattaactaaatagatgaaaa 11018183  T
Q  307 tatgttaaagcaaaatacgtcgacaacaaccaagcattatcctactaa 354  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  11018182 tatgttaaagcaaaatacgtcgacaacaaccaagcattatcccactaa 11018135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 502 - 846
Target Start/End: Complemental strand, 11017597 - 11017235
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 601  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11017597 tttttaaatgttactgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 11017498  T
Q  602 aacaatttcctttatttagtaacagttttcaattgttaca----------------gtattgtcgattggacaaccctccatttgatctacccttctaac 685  Q
    |||||||| |||||||||||||| |||||||||||||||                 | |||||||||| |||||||||||||||||||||||||||||||    
T  11017497 aacaattttctttatttagtaacggttttcaattgttactagatctcaattatgttgaattgtcgatttgacaaccctccatttgatctacccttctaac 11017398  T
Q  686 tacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctc--taatatt 783  Q
    |||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||    
T  11017397 tacaaaatctacgggtcttctctccacatacccaaaccacttaagccgagtttccacgatcttttctactataggtgctacctcaactctctttaatatt 11017298  T
Q  784 ttcattcctaatcttatctcatctagtctttactcttgccacacgtccaacacaacattccca 846  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11017297 ttcattcctaatcttatctcatctagtctttactcttgccacacgtccaacgcaacattccca 11017235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 471 - 630
Target Start/End: Complemental strand, 41573564 - 41573405
Alignment:
Q  471 aaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaac 570  Q
    ||||||||||||||||| ||| | | |||| ||| ||||||||| | ||||||||||||| ||||| |||||   |||||||||||||  ||||||||||    
T  41573564 aaagtgttacaaaaatacaaaaaagcaacattttctaaatgttactaataatactataaaatgttattgaagtaatttagtaacacggggtttacctaac 41573465  T
Q  571 aattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagtttt 630  Q
    ||||| | || |||||||||||||||||||||||| ||| ||| ||||||| ||| ||||    
T  41573464 aattgtttaactgttactaaatttaattagtaacatttttcttgatttagttacattttt 41573405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 502 - 640
Target Start/End: Complemental strand, 24479292 - 24479154
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 601  Q
    ||||| |||||||| |||||||||||||| | | ||| ||||| ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||    
T  24479292 tttttgaatgttatagataatactataaaatataactaaagctctttagtaacacgagctttacctaagaattgttcaaatgttactaaatttaattagt 24479193  T
Q  602 aacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||| ||  ||| ||||||||| | ||||||| ||||||    
T  24479192 aacagttatcttgatttagtaataattttcaagtgttac 24479154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 30267192 - 30267005
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| | | ||| || ||  ||| ||||| | |||||  |||| ||||||||| ||| ||| || || ||| |||    
T  30267192 tgttactagttatacaaaaagtgttacaatagtgtaacatttgcgacactttttgattgttacggatagtactataaaatgtaactaaaactctttggta 30267093  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||| ||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  30267092 acacgggctttacctaacaattgttcaggtgttactaaatttaattactaacatttttcttgatttagttacaattttcaagtgttac 30267005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 454 - 640
Target Start/End: Original strand, 31342627 - 31342814
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||| ||| |||||||||||||||||| ||  ||  || || |||| ||||| | |||||  |||| ||||||||| ||| ||| || |  |||||||    
T  31342627 tgttacaagtgatacaaaaagtgttacaataaggtaccatttgcaacactttttgattgttacagatagtactataaaatgtaactaaaacactttagta 31342726  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  31342727 acacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 31342814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 15513792 - 15513669
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |||||||||||||||  |||||||||||||||| |||| |||||| |||||||| |||||||| ||| ||| ||    
T  15513792 gatagtactataaaatgtaactaaatctttttagtaacacgagctttacctaacaattgttcaagtgttacaaaatttaactagtaacatttttcttgat 15513693  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||| | ||| |||| |||||||||    
T  15513692 ttacttacaatttttaattgttac 15513669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 44921146 - 44920960
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| | | ||| || ||  ||| ||||| | |||||  |||| ||||||||| ||| ||| || || |||||||    
T  44921146 tgttactagtgatacaaaaagtgttacaatagtgtaacatttgcgacatttttttattgttacggatagtactataaaatgtaactaaaactctttagta 44921047  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||  |||||||||||||||| | |  ||||||||||||||||||||||| ||||  || ||||||| ||| ||||||| ||||||    
T  44921046 acacgagctttacctaacaattgtttaggtgttactaaatttaattagtaac-atttttttgatttagttacaattttcaagtgttac 44920960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 502 - 632
Target Start/End: Complemental strand, 7702569 - 7702439
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 601  Q
    |||||||||||||  |||||||||| ||| ||| ||| ||||| |||||||| | || ||||||||||||||||  ||||||||||||| |||||||| |    
T  7702569 tttttaaatgttacagataatactacaaaatgtaactaaagctctttagtaatatgggctttacctaacaattgtacaaatgttactaattttaattaat 7702470  T
Q  602 aacaatttcctttatttagtaacagttttca 632  Q
    |||| |||  || ||||||||| | ||||||    
T  7702469 aacattttttttaatttagtaataattttca 7702439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 517 - 633
Target Start/End: Complemental strand, 7718310 - 7718194
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| | | || || ||||||||||||||||||| |||||||||| |||  |||||||||||||||||||||| | ||| ||| ||    
T  7718310 gatagtactataaaatgtaattaaaactctttagtaacacggactttatctaacaattgttcatgtgttactaaatttaattagtaatatttttcttgat 7718211  T
Q  617 ttagtaacagttttcaa 633  Q
    ||||| ||| |||||||    
T  7718210 ttagttacaattttcaa 7718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 478 - 599
Target Start/End: Complemental strand, 26734911 - 26734791
Alignment:
Q  478 tacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggt 577  Q
    |||||||||||||||| |||||| |||| || ||||| |||||||| | |||| || |||| ||||| |||| ||| | ||||||||||||||||||  |    
T  26734911 tacaaaaatataaataagtaacaattttgaa-tgttactgataatattgtaaaatgatactaaagctctttaataatatggactttacctaacaattatt 26734813  T
Q  578 caaatgttactaaatttaatta 599  Q
    ||||| || |||||||||||||    
T  26734812 caaatattgctaaatttaatta 26734791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 736 - 813
Target Start/End: Complemental strand, 44411745 - 44411668
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||||||| |||||||||||||||| || |||||||||| || |||||  ||||| ||||||||||||||||    
T  44411745 tttccaccatctttcctactataggtgctacttcaactctctaatgttgtcatttgtaatcatatctcatctagtctt 44411668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 508 - 640
Target Start/End: Complemental strand, 22966659 - 22966525
Alignment:
Q  508 aatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaat 607  Q
    |||||||  ||||||||| |||| ||| ||| ||| | |||||||||| || |||||||||||||||| | |||||| ||||||||| |||||||| | |    
T  22966659 aatgttacagataatactctaaaatgtaactaaaggtctttagtaacaggggctttacctaacaattgtttaaatgtaactaaatttcattagtaatatt 22966560  T
Q  608 t--tcctttatttagtaacagttttcaattgttac 640  Q
    |  |  |||||||||||| ||||||||| ||||||    
T  22966559 ttattttttatttagtaatagttttcaagtgttac 22966525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 546 - 640
Target Start/End: Complemental strand, 40016687 - 40016593
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||| | || |||||||||||||||  ||||||||||||||||||||| ||||||| ||| ||| ||||| ||| | ||||||| ||||||    
T  40016687 tttagtaatagggtctttacctaacaattattcaaatgttactaaatttaatcagtaacattttacttgatttaataataattttcaagtgttac 40016593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 43752121 - 43752237
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || |  |||||| ||||||  | ||| ||||| |||| |||||||||| |||||| | |||| |||| |||||||||||||||    
T  43752121 cctccatctgatctactctccctactacataatctataggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactatagg 43752220  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  43752221 tgctaccccaactctct 43752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 767
Target Start/End: Complemental strand, 6219075 - 6218969
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||  | || || |||||| |||||||  |||||||||| |||| |||||| ||| |||||| | | ||||| ||||||||||||||| |    
T  6219075 cctccatttgatcacctctccttactacataatctacatatctcctctctacatgtccaaaccacctaagcctattatccactatcttttctactataag 6218976  T
Q  761 tgctacc 767  Q
    |||||||    
T  6218975 tgctacc 6218969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 41197402 - 41197508
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||||||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||| ||||||    
T  41197402 cctccatttgatctactcttcttacaacggcatctacggatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattatagg 41197501  T
Q  761 tgctacc 767  Q
    |||||||    
T  41197502 tgctacc 41197508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 45367799 - 45367905
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||||||||||||||||||||| ||   |||||||| ||| ||||| |||| |||||| ||  ||||   | |||| |||| |||||||||||||||    
T  45367799 cctccatttgatctacccttctaacaacggcatctacgggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactatagg 45367898  T
Q  761 tgctacc 767  Q
    |||||||    
T  45367899 tgctacc 45367905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 734 - 813
Target Start/End: Original strand, 9647856 - 9647935
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||||||||||| |||||||||||||| || || | ||||| |||| ||  |||| ||||||||||| |||||||||||    
T  9647856 agtttccaccatcatttctactataggtactgccccaactctataatgttgacatttctaatcttatcacatctagtctt 9647935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 734 - 810
Target Start/End: Complemental strand, 38434986 - 38434906
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcga----ctctctaatattttcattcctaatcttatctcatctagt 810  Q
    |||||||||||||||||||||||||||||||||| | |    ||||||||| || ||||| |||||||| |||| ||||||    
T  38434986 agtttccaccatcttttctactataggtgctaccccaattctctctctaatgttgtcatttctaatcttctctcgtctagt 38434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 767
Target Start/End: Complemental strand, 18958959 - 18958909
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||| ||| |||||| | ||||||||||||||||||||||||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctacc 18958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 678 - 767
Target Start/End: Complemental strand, 1456321 - 1456232
Alignment:
Q  678 cttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||| ||| |||||||||  |||||  |||| |||  ||||||  || |||||||||||||||||||||||||||  ||||||||||||    
T  1456321 cttcttacttcaaaatctagagatcttatctctacacgtccaaactacctaagccgagtttccaccatcttttctaggataggtgctacc 1456232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 3866180 - 3866064
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || || | |||||||| ||| ||||| ||||   |||| ||  |||||| | |||| |||| ||||| |||||||||    
T  3866180 cctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactatagg 3866081  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  3866080 tgctacccccactctct 3866064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 12734807 - 12734691
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||  |||| |||||| ||  |||||| | |||| ||||  ||||||||||||||    
T  12734807 cctccatttgatctactcttcttaccacggcatctacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaatttttctactatagg 12734708  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  12734707 tgctacccccactctct 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 25834789 - 25834673
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   ||| || | ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  25834789 cctccatttgatctactcttcttacaacggcatccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 25834690  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  25834689 tgctacccccactctct 25834673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 769
Target Start/End: Complemental strand, 11006778 - 11006727
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacctc 769  Q
    |||| |||||||| |||||||||  ||||||||||||||||| |||||||||    
T  11006778 caaaccacttaagtcgagtttccgtcatcttttctactatagatgctacctc 11006727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 801
Target Start/End: Original strand, 11992282 - 11992424
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||||||||| || |||||||| ||   |||||||| ||| ||||| | || |||||| ||  |||||  | |||| |||| |||||||||||||||    
T  11992282 cctccatttgatccactcttctaacaacggcatctacgggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactatagg 11992381  T
Q  761 tgctacctcga--ctctctaatattttcattcctaatcttatc 801  Q
    |||||||   |  |||||||||  | |||||||||||||||||    
T  11992382 tgctaccctcactctctctaatggtgtcattcctaatcttatc 11992424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 767
Target Start/End: Complemental strand, 12141577 - 12141546
Alignment:
Q  736 tttccaccatcttttctactataggtgctacc 767  Q
    ||||||||||||||||||||||||||||||||    
T  12141577 tttccaccatcttttctactataggtgctacc 12141546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 663 - 777
Target Start/End: Complemental strand, 2610694 - 2610580
Alignment:
Q  663 tccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtg 762  Q
    |||||||||||||| ||||| || || | |||||||  ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||| ||||||||||    
T  2610694 tccatttgatctactcttcttaccacgacatctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtg 2610595  T
Q  763 ctacctcgactctct 777  Q
    ||||| | |||||||    
T  2610594 ctacccccactctct 2610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 727 - 777
Target Start/End: Complemental strand, 11412763 - 11412713
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| | |||||||||| ||||||||||||||||||||| | |||||||    
T  11412763 taagcctattttccaccatattttctactataggtgctaccccaactctct 11412713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 728 - 761
Target Start/End: Original strand, 14197404 - 14197437
Alignment:
Q  728 aagccgagtttccaccatcttttctactataggt 761  Q
    ||||| ||||||||||||||||||||||||||||    
T  14197404 aagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 605
Target Start/End: Original strand, 15540237 - 15540361
Alignment:
Q  481 aaaaatataaatatgtaacagtttttaaatgttattgataatactataaag-tgttactgaagctttttagtaacacggactttacctaacaattggtca 579  Q
    |||||| |||| | |||||| ||||||| ||||| | ||||||||| |||  |||||||||  |  ||||||| |||  |||||||||| |||||| | |    
T  15540237 aaaaatgtaaacaagtaacattttttaattgttactaataatactaaaaaaatgttactgataccgtttagtaccacaaactttacctatcaattgtt-a 15540335  T
Q  580 aatgttactaaatttaattagtaaca 605  Q
    |||||||||| || ||||||||||||    
T  15540336 aatgttactagatataattagtaaca 15540361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 777
Target Start/End: Complemental strand, 18188865 - 18188772
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||  ||||| ||||  ||||  ||||| ||| |||| |||| |||||||||||||||||  | |||||||||| | |||||||    
T  18188865 actacaaaatctatagatcttctctttacatgcccaaaccacctaagtcgagcttccaccatcttttctagaagaggtgctaccccaactctct 18188772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 777
Target Start/End: Original strand, 19337099 - 19337140
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||| ||||||||||||||||| | |||||||    
T  19337099 tttccaccatctttactactataggtgctaccccaactctct 19337140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 767
Target Start/End: Original strand, 23714508 - 23714541
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacc 767  Q
    ||||||||||||||||||||||||| ||||||||    
T  23714508 agtttccaccatcttttctactatatgtgctacc 23714541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 767
Target Start/End: Original strand, 24102180 - 24102213
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacc 767  Q
    ||||||||||||||||||||||||| ||||||||    
T  24102180 agtttccaccatcttttctactatatgtgctacc 24102213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 762
Target Start/End: Original strand, 24583806 - 24583907
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || |||  |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||| ||||||    
T  24583806 cctccatttgatctactcttcttacgacagcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattatagg 24583905  T
Q  761 tg 762  Q
    ||    
T  24583906 tg 24583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 772 - 813
Target Start/End: Original strand, 37393455 - 37393496
Alignment:
Q  772 ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||||||||||| || ||| ||||||||||||||||    
T  37393455 ctctctaatattttcatttctgatcatatctcatctagtctt 37393496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 1e-62; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 375 - 609
Target Start/End: Complemental strand, 42076309 - 42076080
Alignment:
Q  375 gattcacaatttttattctagacaactttgcgacagttttttacaacttctcaaattataaatatgtgacannnnnnnatgttactagtaatacaaaaag 474  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||        | ||| | |||||||||||||    
T  42076309 gattcacaatttttagtctagacaactttgcgacacttttt-acaacttctcaaattataaaaatgtgacatttt----tttta-tggtaatacaaaaag 42076216  T
Q  475 tgttacaaaaa-tataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaat 573  Q
    ||||| ||||| ||||||||||||||| |||||||||||||  |||||||||||||| | || ||||||||||||||||||| |||||||| ||||||||    
T  42076215 tgttaaaaaaaatataaatatgtaacaatttttaaatgttaccgataatactataaaatattcctgaagctttttagtaacatggactttatctaacaat 42076116  T
Q  574 tggtcaaatgttactaaatttaattagtaacaattt 609  Q
    || |||||||||||||||||||||||||||||||||    
T  42076115 tgttcaaatgttactaaatttaattagtaacaattt 42076080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 453 - 604
Target Start/End: Complemental strand, 37233221 - 37233070
Alignment:
Q  453 atgttactagtaatacaaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  37233221 atgttactagtaatacaaaaagtgttacgaaaatataaatatgaaatagtttttaaatgttactgataatactataaaatgttactgaaactttttagta 37233122  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaac 604  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  37233121 acacggactatacctaacaattgctcaaatgttactaaatttaattagtaac 37233070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 17037732 - 17037545
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||    
T  17037732 tgttactagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatgtaactaaaactctttagta 17037633  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||| ||  ||||||| ||||||    
T  17037632 acactgactttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttgatttagttacgattttcaagtgttac 17037545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 520 - 621
Target Start/End: Original strand, 40401987 - 40402088
Alignment:
Q  520 aatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttattta 619  Q
    ||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||| ||||| || |||||||||||||||||||| ||| |||||||||    
T  40401987 aatactataaaatgttgctgaagctttttagcaacacagactttacctaacaattgttcaaacgtaactaaatttaattagtaacatttttctttattta 40402086  T
Q  620 gt 621  Q
    ||    
T  40402087 gt 40402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 541 - 641
Target Start/End: Original strand, 9333560 - 9333660
Alignment:
Q  541 agctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||| || ||| ||||||||||||||    
T  9333560 agctttttagtaacatcgactttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgattttgttacaattttcaattgttac 9333659  T
Q  641 a 641  Q
    |    
T  9333660 a 9333660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 454 - 640
Target Start/End: Original strand, 5078975 - 5079162
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||| ||| |||||||||||||||||| ||  ||  || || |||| ||||| | |||||  |||| ||||||||| ||| ||| || |  |||||||    
T  5078975 tgttacaagtgatacaaaaagtgttacaataaggtaccatttgcaacactttttgattgttacagatagtactataaaatgtaactaaaacactttagta 5079074  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  5079075 acacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 5079162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 640
Target Start/End: Original strand, 9354388 - 9354487
Alignment:
Q  541 agctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||||| ||| ||| ||| ||| ||| ||||||||||||||    
T  9354388 agctttttagtaacatgggctttacctaacaattgctcaaatgttattaaatttaattagtaacatttttcttgattcagttacaattttcaattgttac 9354487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 375 - 514
Target Start/End: Original strand, 40389892 - 40390033
Alignment:
Q  375 gattcacaatttttattc--tagacaactttgcgacagttttttacaacttctcaaattataaatatgtgacannnnnnna-tgttactagtaatacaaa 471  Q
    ||||||||||||||| ||  ||||||||||||||||| ||||| |||||||| ||| ||||||| || |||||       | ||||||| ||||||||||    
T  40389892 gattcacaatttttagtccatagacaactttgcgacacttttt-acaacttcacaatttataaaaatctgacatttttttaatgttactggtaatacaaa 40389990  T
Q  472 aagtgttacaaaaatataaatatgtaacagtttttaaatgtta 514  Q
    || |||||||||||||||||||||||||||||||| |||||||    
T  40389991 aaatgttacaaaaatataaatatgtaacagtttttgaatgtta 40390033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 518 - 621
Target Start/End: Complemental strand, 19985119 - 19985016
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatt 617  Q
    ||||||||||||| ||| ||| || || |||||||||  ||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||| |||    
T  19985119 ataatactataaaatgtaactaaaactctttagtaacctggactttacctaacaattattcaaatgttactaaatctaattagtaacattttccttgatt 19985020  T
Q  618 tagt 621  Q
    ||||    
T  19985019 tagt 19985016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 640
Target Start/End: Complemental strand, 7410920 - 7410826
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||| |||  || ||||||| ||| |||| || ||||||    
T  7410920 tttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacattttttttgatttagttacaattttgaaatgttac 7410826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 550 - 640
Target Start/End: Original strand, 31068971 - 31069060
Alignment:
Q  550 gtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||| ||| ||||||| ||| |||| || ||||||    
T  31068971 gtaacacgggctttacctaacaattgttcaa-tgttactaaatttaattagtaacatttttcttgatttagttacaatttttaagtgttac 31069060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 661 - 766
Target Start/End: Complemental strand, 43475348 - 43475243
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || || ||||||| |||||| | ||| |||||   ||| ||||| ||| |||||| |||||||||||||||||||||||||||    
T  43475348 cctccatctgatctactctccttactacaacatctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactatagg 43475249  T
Q  761 tgctac 766  Q
    ||||||    
T  43475248 tgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 622
Target Start/End: Complemental strand, 10869552 - 10869457
Alignment:
Q  526 ataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagta 622  Q
    |||||||||||| | | || |||||||| | ||| | ||||||||||||| ||||||||||||||||||||||||||||||||| | | ||||||||    
T  10869552 ataaagtgttaccgtaactctttagtaagaggga-tatacctaacaattgttcaaatgttactaaatttaattagtaacaattttcatgatttagta 10869457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 638
Target Start/End: Complemental strand, 23679565 - 23679445
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatt 617  Q
    ||||||||||||| ||| ||| || || |||||||||||| |||||| |||| ||||| || |||||| | ||||||||||| ||||| ||| ||| |||    
T  23679565 ataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaattaataacatttttcttgatt 23679466  T
Q  618 tagtaacagttttcaattgtt 638  Q
    |||| ||| ||||||| ||||    
T  23679465 tagttacaattttcaagtgtt 23679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 638
Target Start/End: Original strand, 23855246 - 23855366
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatt 617  Q
    ||||||||||||| ||| ||| || || |||||||||||| |||||| |||| ||||| || |||||| | ||||||||||| ||||| ||| ||| |||    
T  23855246 ataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaattaataacatttttcttgatt 23855345  T
Q  618 tagtaacagttttcaattgtt 638  Q
    |||| ||| ||||||| ||||    
T  23855346 tagttacaattttcaagtgtt 23855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 718 - 814
Target Start/End: Complemental strand, 37124618 - 37124520
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctc--taatattttcattcctaatcttatctcatctagtcttt 814  Q
    ||||| ||||||||| | |||||| ||||||||| ||||||||||||||| ||||||||  |||| |||||||| ||||| | || |||||||||||||    
T  37124618 caaatgacttaagcctattttccatcatcttttcaactataggtgctaccccgactctctttaattttttcatttctaatatgatttcatctagtcttt 37124520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 640
Target Start/End: Complemental strand, 30786383 - 30786269
Alignment:
Q  526 ataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaaca 625  Q
    ||||| ||| ||| || ||||||||||||| ||  ||||||||||||||  ||||||||||||||||| ||| ||||||| ||| ||| ||| ||| |||    
T  30786383 ataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatcagtaacatttttcttgattaagttaca 30786284  T
Q  626 gttttcaattgttac 640  Q
     ||||||| ||||||    
T  30786283 attttcaagtgttac 30786269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 633
Target Start/End: Original strand, 12042195 - 12042268
Alignment:
Q  560 ctttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaa 633  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| ||| ||| ||||||| ||| |||||||    
T  12042195 ctttacctaacaattgttcaaatgttactaaattgaatcagtaacatttttcttgatttagttacaattttcaa 12042268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 640
Target Start/End: Original strand, 18191886 - 18191947
Alignment:
Q  579 aaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||| ||| ||||||||||||||    
T  18191886 aaatgttactaaatttaattagtaacatttttcttaatttagttacaattttcaattgttac 18191947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 469 - 538
Target Start/End: Original strand, 18191824 - 18191895
Alignment:
Q  469 aaaaagtgttacaaaaatat--aaatatgtaacagtttttaaatgttattgataatactataaagtgttact 538  Q
    ||||||||||||||||||||  |||||||||||| ||||||| ||||| |||||||||||| || |||||||    
T  18191824 aaaaagtgttacaaaaatatataaatatgtaacaatttttaactgttactgataatactattaaatgttact 18191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 24178618 - 24178502
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||||||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  24178618 cctccatttgatctactcttcttaccacggcatctacgggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 24178519  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  24178518 tgctacccccactctct 24178502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 38685075 - 38684959
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  38685075 cctccatttgatctactcttcttacgacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 38684976  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  38684975 tgctacccccactctct 38684959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 705 - 813
Target Start/End: Complemental strand, 6889057 - 6888945
Alignment:
Q  705 ctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgac----tctctaatattttcattcctaatcttat 800  Q
    ||||| |||| |||||| |||||||||| | ||||||||||||||||  ||||| |||||||| | ||    ||| ||||||| ||||| |||||| |||    
T  6889057 ctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaactctttctgtaatattgtcatttctaatcatat 6888958  T
Q  801 ctcatctagtctt 813  Q
    |||||||||||||    
T  6888957 ctcatctagtctt 6888945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 539
Target Start/End: Complemental strand, 10869846 - 10869759
Alignment:
Q  453 atgttactagtaatacaaaaagtgttacaaaaatataaatatgtaaca-gtttttaaatgttattgataatactataaagtgttactg 539  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||||||  |||||   | ||| || |||||||||||||||||||||    
T  10869846 atgttactagtgatacaaaaagtgttacaaaaatacaaataagtaacatttttttgtgtcttactggtaatactataaagtgttactg 10869759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 4496492 - 4496376
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  4496492 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactatagg 4496393  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  4496392 tgctacccccactctct 4496376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 659 - 767
Target Start/End: Original strand, 15588712 - 15588820
Alignment:
Q  659 accctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactata 758  Q
    ||||||||| |||||||| || || | ||||||||| | |  ||| || || ||| | ||||||||| |||||| ||||||||||||||||||| |||||    
T  15588712 accctccatctgatctactctccttattacaaaatccaagtgtcttctatctacaaacccaaatcacctaagcctagtttccaccatcttttcttctata 15588811  T
Q  759 ggtgctacc 767  Q
    ||| |||||    
T  15588812 ggtactacc 15588820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 671 - 767
Target Start/End: Original strand, 31636104 - 31636200
Alignment:
Q  671 atctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||||| || || ||||||| ||| |||| ||| ||||| ||||  ||||| ||| |||| | |||||| |||||||||||||||||||||||||||    
T  31636104 atctactctccttactacaacatccacgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacc 31636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 767
Target Start/End: Complemental strand, 1275372 - 1275266
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   || ||||||||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  1275372 cctccatttgatctactcttcttaccacggcatttacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 1275273  T
Q  761 tgctacc 767  Q
    |||||||    
T  1275272 tgctacc 1275266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 813
Target Start/End: Original strand, 4026532 - 4026664
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctc---taat 780  Q
    |||||| ||||||| | ||||||||| |||| |||||| ||| |||| | ||||||||||||||||| |||| || ||| |||| | ||||||   | ||    
T  4026532 actacagaatctacaggtctcctctctacatgtccaaaccacctaagactagtttccaccatcttttttactttacgtgttaccccaactctctcttcat 4026631  T
Q  781 attttcattcctaatcttatctcatctagtctt 813  Q
     || || ||  ||||||||||||||||||||||    
T  4026632 gttctcgtttttaatcttatctcatctagtctt 4026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 736 - 777
Target Start/End: Complemental strand, 14667796 - 14667755
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  14667796 tttccaccatcttttctactataggtgctaccccaactctct 14667755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 661 - 766
Target Start/End: Complemental strand, 20456881 - 20456776
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| | |||| ||  |||||| | |||| |||| |||||||||||||||    
T  20456881 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactatagg 20456782  T
Q  761 tgctac 766  Q
    ||||||    
T  20456781 tgctac 20456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 1287753 - 1287869
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||  ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  1287753 cctccatttgatctactcttcttaccacggcatctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 1287852  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  1287853 tgctacccccactctct 1287869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 7359434 - 7359549
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || || |||||| |||||||  |||| ||||| ||||  ||||| ||| ||| || | |||||||||| ||||||||||||||    
T  7359434 cctccatctgatctactctccttactacagaatctacatatcttctctctacatg-ccaaaccacctaaacctattttccaccatattttctactatagg 7359532  T
Q  761 tgctacctcgactctct 777  Q
    || |||||  |||||||    
T  7359533 tgttacctgaactctct 7359549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 789
Target Start/End: Original strand, 12577078 - 12577149
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctctaatattttcatt 789  Q
    ||||| ||| |||| | ||||||||||||||||||||||| |||||||||| | |||||||||| || |||||    
T  12577078 ccaaaccacataagtctagtttccaccatcttttctactacaggtgctacc-caactctctaatgttgtcatt 12577149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 15489666 - 15489782
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| | |||||| || || | ||||||||||||  |||| ||||| ||||  ||||| ||  ||||| ||||||| |||||||||||||| |||||    
T  15489666 cctccatctaatctactctccttaatacaaaatctacaaatcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaatagg 15489765  T
Q  761 tgctacctcgactctct 777  Q
    | ||||| | |||||||    
T  15489766 tactaccccaactctct 15489782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 810
Target Start/End: Original strand, 41833832 - 41833907
Alignment:
Q  737 ttccaccatcttttcta--ctataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagt 810  Q
    |||||||||||||||||  | |||||||||||| | |||||||||||||  ||||||||||| |||| ||| ||||    
T  41833832 ttccaccatcttttctataccataggtgctaccccaactctctaatattaacattcctaatcctatcccatatagt 41833907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 777
Target Start/End: Complemental strand, 14665821 - 14665706
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| | || ||| ||||||||||||    
T  14665821 ctccatttgatctactcttcttacgacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggt 14665722  T
Q  762 gctacctcgactctct 777  Q
    |||||| | |||||||    
T  14665721 gctacccccactctct 14665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 767
Target Start/End: Original strand, 16347583 - 16347658
Alignment:
Q  692 atctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| ||||||||||||||||||||||    
T  16347583 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 16347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 776
Target Start/End: Complemental strand, 33667268 - 33667209
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctc 776  Q
    ||||| ||| |||| | |||||| ||||||||||||||||||||||||||| | ||||||    
T  33667268 ccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctc 33667209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 767
Target Start/End: Original strand, 18351138 - 18351188
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||| ||| |||||| |||||| ||||| |||||||||||||||||||||    
T  18351138 ccaaaccacctaagcctagtttctaccatattttctactataggtgctacc 18351188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 662 - 756
Target Start/End: Complemental strand, 42199393 - 42199299
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctacta 756  Q
    |||||| |||||||| || || |||||| |||||||   ||| ||||| ||||  ||||| ||| |||| | |||||||||||||||||||||||    
T  42199393 ctccatgtgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 42199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 767
Target Start/End: Complemental strand, 27944 - 27895
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||| ||| |||||| | |||||| |||||||||||||||||||||||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctacc 27895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 777
Target Start/End: Complemental strand, 79546 - 79505
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||||||||||||||| ||||| | |||||||    
T  79546 tttccaccatcttttctactataggtactaccccaactctct 79505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 813
Target Start/End: Original strand, 219693 - 219783
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctct----aatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||| ||||||||||| |||||| || |||||||||||| | |||||||    ||| || |||||| |||||||||||| ||| |||||    
T  219693 taagccaagtttccaccaccttttcaacgataggtgctaccccaactctctctccaatgttgtcattcgtaatcttatctcgtcttgtctt 219783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 762
Target Start/End: Complemental strand, 1525752 - 1525651
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || |||||| || |||  |||| ||| ||||| |||| |||||  ||| |||| | |||||| |||||||||||||| |||||    
T  1525752 cctccatctgatctactctcctaactgcagaattcacgggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttctacaatagg 1525653  T
Q  761 tg 762  Q
    ||    
T  1525652 tg 1525651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 767
Target Start/End: Complemental strand, 15168855 - 15168794
Alignment:
Q  706 tctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||| |||| |||||| ||| | |||| | |||| |||||||||||||||||||||||||||    
T  15168855 tctcaacatgtccaaaccaccttagcctattttctaccatcttttctactataggtgctacc 15168794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 779
Target Start/End: Complemental strand, 37065564 - 37065519
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctctaa 779  Q
    |||||| ||||||||||||||||||||||||| ||  |||||||||    
T  37065564 agtttctaccatcttttctactataggtgctatctaaactctctaa 37065519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 5e-49; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 471 - 634
Target Start/End: Original strand, 23264425 - 23264588
Alignment:
Q  471 aaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaac 570  Q
    ||||||||||||||||| ||||| |||||| ||||| | ||||  ||||||||||||||||| || |||||||| |||||||||||||| ||||||||||    
T  23264425 aaagtgttacaaaaatacaaataagtaacatttttttagtgtttctgataatactataaagttttgctgaagctctttagtaacacggattttacctaac 23264524  T
Q  571 aattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaat 634  Q
    ||||| || |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  23264525 aattgttcgaatgttactaaatttaattagtaacaattttcttgatttagtaacaattttcaat 23264588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 470 - 621
Target Start/End: Original strand, 4485493 - 4485644
Alignment:
Q  470 aaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaa 569  Q
    ||||||||| |||||||||||||||| |||| ||||| ||||||| | ||||| ||||| | ||||||| || || |||| |||||||||||||||||||    
T  4485493 aaaagtgttgcaaaaatataaatatgcaacatttttttaatgttactaataattctatagattgttactaaaactatttaataacacggactttacctaa 4485592  T
Q  570 caattggtcaaatgttactaaatttaattagtaacaatttcctttatttagt 621  Q
    |||||  |||||| ||||||||||||||||||| || ||||||| |||||||    
T  4485593 caattattcaaatattactaaatttaattagtaccattttccttgatttagt 4485644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 14669257 - 14669442
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||| ||| ||||||| |||||   ||||||||||||| ||| ||| || || |||||||    
T  14669257 tgttactagtgatacaaaaagtgttacaataatgtaacatttgtgacactttttaattgttacaaataatactataaaatgtaactaaaactctttagta 14669356  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    ||||||||||||||||||||||  || | |||| | ||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  14669357 acacggactttacctaacaattattcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 14669442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 458 - 640
Target Start/End: Complemental strand, 12592018 - 12591835
Alignment:
Q  458 actagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacac 556  Q
    |||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||||||    
T  12592018 actagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaattgtaactaaaactctttagtaacac 12591919  T
Q  557 ggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    || |||||||||||||||| || |  ||||||||||||||||| ||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  12591918 gggctttacctaacaattgttcgagcgttactaaatttaattactaacatttttcttgatttagttacaattttcaagtgttac 12591835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 17719634 - 17719819
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||    
T  17719634 tgttactagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaattgtaactaaaactctttagta 17719733  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||| |||||||||| || | |||| | ||| ||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  17719734 acacggactttatctaacaattgttcgagtgttgcaaaaattaattagtaacatttttcttgatttagttacaattttcaagtgtt 17719819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 16734930 - 16734807
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||| ||    
T  16734930 gatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaaatgttgctaaatttaattagtaacatttttcttgat 16734831  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||| ||||||    
T  16734830 ttagttacaattttcaagtgttac 16734807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 461 - 640
Target Start/End: Complemental strand, 34375011 - 34374827
Alignment:
Q  461 agtaatacaaaaagtgttacaaaaa---tataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacg 557  Q
    ||||||||||||||||||| |||||   |||||| | |||||| ||| | ||||||| | ||||||||||||| | ||||| || || |||||||||||     
T  34375011 agtaatacaaaaagtgttaaaaaaaatatataaacaagtaacactttatgaatgttactcataatactataaaatattactcaaactctttagtaacaca 34374912  T
Q  558 gactttacctaacaa--ttggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    || ||| ||||||||  ||| ||||||||||| |||| |||||||||||| ||| ||| ||||| | ||| |||| |||||||||    
T  34374911 gattttgcctaacaattttgttcaaatgttacaaaatataattagtaacatttttcttgatttaattacattttttaattgttac 34374827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 640
Target Start/End: Original strand, 11936742 - 11936865
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  ||||||||||||| ||||| |||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  11936742 gatagtactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 11936841  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||| ||||||    
T  11936842 ttagttacaattttcaagtgttac 11936865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 15361840 - 15361717
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || | |||||||||||| | |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  15361840 gatagtactataaaatgtaactaaaacattttagtaacaccggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 15361741  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| |||| || ||||||    
T  15361740 ttagttacaatttttaagtgttac 15361717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 526 - 641
Target Start/End: Original strand, 29667899 - 29668016
Alignment:
Q  526 ataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttccttt--atttagtaa 623  Q
    ||||| ||||||| || || |||| ||||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||  |||| || |    
T  29667899 ataaaatgttactaaatctctttaataacacaagctttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttttgatttcgtta 29667998  T
Q  624 cagttttcaattgttaca 641  Q
    || |||||||||||||||    
T  29667999 caattttcaattgttaca 29668016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 6684289 - 6684096
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataata-------ctataaagtgttactgaagctt 545  Q
    |||||||||| |||||| ||||||||||| ||||||| || ||  ||| ||||||| |||||| |||||||       ||||||| ||| ||| || ||     
T  6684289 tgttactagtgatacaagaagtgttacaataatataacatttgcgacactttttaattgttatagataatagataatactataaaatgtaactaaaactc 6684190  T
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||| |||||||||||||||| || || | |||||||||||||||||||||||| ||| ||| ||| ||| ||| |||| || ||||||    
T  6684189 tttagtaacatggactttacctaacaa-tgttcgagtgttactaaatttaattagtaacatttttcttgattaagttacaatttttaagtgttac 6684096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 517 - 630
Target Start/End: Original strand, 11948722 - 11948835
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  ||||||||||||| ||||| |||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  11948722 gatagtactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 11948821  T
Q  617 ttagtaacagtttt 630  Q
    ||||| ||| ||||    
T  11948822 ttagttacaatttt 11948835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 5258322 - 5258438
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||  ||||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  5258322 cctccatttgatctactcttcttacaacggaatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 5258421  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  5258422 tgctacccccactctct 5258438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 609
Target Start/End: Complemental strand, 10070843 - 10070688
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||| | |||||||||||||||||| ||| ||| || ||  ||| |||| || |||||   ||||||||||||| ||| ||| || ||||| ||||    
T  10070843 tgttactaatgatacaaaaagtgttacaataatgtaacatttgcgacacttttaaattgttacaaataatactataaaatgtaactaaaactttt-agta 10070745  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaattt 609  Q
    ||||||||||||| ||||||||  |  | ||||| ||||||||||||||||||||||    
T  10070744 acacggactttacgtaacaattatttgagtgttattaaatttaattagtaacaattt 10070688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 640
Target Start/End: Original strand, 23904328 - 23904450
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||||||||||||||||| | | || || ||| |||| | || |||||||||||||||| ||||||||||||||||| | ||||||||  ||| ||| ||    
T  23904328 gataatactataaagtgtaa-taaacctcttttgtaagaggggctttacctaacaattgttcaaatgttactaaattgatttagtaacttttttcttcat 23904426  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    |||||| || ||||||| ||||||    
T  23904427 ttagtagcaattttcaagtgttac 23904450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 783
Target Start/End: Original strand, 21870303 - 21870369
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctctaatatt 783  Q
    ||||| ||| ||||||||||||| |||||||||||||||| |||||||||| | |||||||||||||    
T  21870303 ccaaaccacctaagccgagtttctaccatcttttctactacaggtgctaccccaactctctaatatt 21870369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 736 - 813
Target Start/End: Complemental strand, 31818565 - 31818490
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||| |||| |||||||||||||||| |||||||  |||| ||||||| |||||||||||||||||| ||||    
T  31818565 tttccaccattttttgtactataggtgctaccccgactct--aataatttcatttctaatcttatctcatctaatctt 31818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 841
Target Start/End: Complemental strand, 2079425 - 2079264
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctac----ctcgactctctaa 779  Q
    |||||| |||||||  |||| ||||| ||||| | ||| |||||||||| | |||||||||||||||||||||||| ||||||    |||  ||||||||    
T  2079425 actacataatctacaaatcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctacccaactc-cctctctaa 2079327  T
Q  780 tattttcattccta-atcttatctcatctagtctttactcttgccacacgtccaacacaacat 841  Q
    |||| ||||| ||| ||| |||||||| |||||||  |  || |||||| |||||||||||||    
T  2079326 tattgtcatttctatatcatatctcatttagtcttaccagttaccacacatccaacacaacat 2079264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 9631161 - 9631253
Alignment:
Q  548 tagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||| || || | ||||||||||| ||||||||||||||||||| ||||||||  | | ||| ||||||||| ||||||||| ||||||    
T  9631161 tagtaacaggggctatgcctaacaattgttcaaatgttactaaatttacttagtaacgttcttcttgatttagtaatagttttcaagtgttac 9631253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 551 - 640
Target Start/End: Complemental strand, 15690529 - 15690440
Alignment:
Q  551 taacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||| |||||||| |||||||||| |  | ||| |||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  15690529 taacatggactttagctaacaattgtttgagtgtcactaaatttaattagtaacatttttcttgatttagttacaattttcaaatgttac 15690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 605
Target Start/End: Complemental strand, 2941103 - 2941043
Alignment:
Q  545 ttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    ||||||||||||  ||||||||||||| ||| |||||||||||||||  ||||||||||||    
T  2941103 ttttagtaacacaaactttacctaacatttgctcaaatgttactaaacataattagtaaca 2941043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 813
Target Start/End: Complemental strand, 8364624 - 8364528
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||| ||| |||||| | |||| |||| |||||||||||||| ||||||  | ||| ||||||||| ||||| |||||| |||| |||||||||||    
T  8364624 ccaaaccacctaagcctattttcaaccaccttttctactatagttgctactccaactgtctaatattgtcatttctaatcctatcccatctagtctt 8364528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 734 - 813
Target Start/End: Original strand, 6641656 - 6641739
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgac----tctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||| |||||||||||||||||||||| |||| | ||    ||||||||||| ||||| | ||||||||| |||||||||||    
T  6641656 agtttctaccatcttttctactataggtgataccccaactctatctctaatattgtcatttccaatcttatcccatctagtctt 6641739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 640
Target Start/End: Original strand, 6673550 - 6673716
Alignment:
Q  470 aaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaa 569  Q
    ||||||||||||||| ||||||||   |||| ||||| ||||||| | | ||||| |||| |||||||||| | | |||||||||||||  |||| ||||    
T  6673550 aaaagtgttacaaaagtataaatagacaacatttttttaatgttactaaaaatac-ataacgtgttactgatg-tgtttagtaacacgggtttta-ctaa 6673646  T
Q  570 caattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||    || |||||||||||||  ||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  6673647 caattaacgaactgttactaaattt-tttagtaacatttttcttgatttagttacatttttcaactgttac 6673716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 735 - 777
Target Start/End: Original strand, 14389415 - 14389457
Alignment:
Q  735 gtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||||||||| |||||||||||||| |||||||    
T  14389415 gtttccaccatcttttctacgataggtgctacctcaactctct 14389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 605
Target Start/End: Original strand, 27969858 - 27969980
Alignment:
Q  483 aaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaat 582  Q
    ||||||| | |||||||||||   |||||||||||||||||    ||| ||||  |||||  |||||||||||  |||||||||||||| ||| | ||||    
T  27969858 aaatatagacatgtaacagttaacaaatgttattgataatatgcaaaaatgttgttgaagtcttttagtaacatagactttacctaacatttgttgaaat 27969957  T
Q  583 gttactaaatttaattagtaaca 605  Q
    ||| ||||||| || ||||||||    
T  27969958 gttgctaaattgaaatagtaaca 27969980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 767
Target Start/End: Complemental strand, 30031364 - 30031258
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   ||||| || ||| ||||| |||| ||||| |||  |||||| | |||| |||| |||||||||||||||    
T  30031364 cctccatttgatctactcttcttacgacggcatctatgggtcttctctctacatgtccaactcatctaagcctattttctaccaacttttctactatagg 30031265  T
Q  761 tgctacc 767  Q
    |||||||    
T  30031264 tgctacc 30031258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 640
Target Start/End: Complemental strand, 1942708 - 1942571
Alignment:
Q  503 ttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagta 602  Q
    |||||| |||||  |||||||||||||| ||| ||| ||| | |||| |||||  |  |||||||| |||||| |||||||||| ||||||| || ||||    
T  1942708 ttttaattgttacagataatactataaaatgtaactaaagatatttaataacaaaggttttacctagcaattgctcaaatgttattaaattttatcagta 1942609  T
Q  603 acaatttcctttatttagtaacagttttcaattgttac 640  Q
    | | ||| ||| ||||||| ||| || |||| ||||||    
T  1942608 atatttttcttgatttagttacaattatcaaatgttac 1942571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 30481218 - 30481311
Alignment:
Q  532 tgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaaca 625  Q
    ||||| ||||||| |||||||||| |  ||||| |||| | ||| |||| |||||||| |||||||||| |||| ||| ||| |||||||||||    
T  30481218 tgttattgaagctctttagtaacatgatctttatctaaaatttgttcaattgttactagatttaattagcaacatttttcttgatttagtaaca 30481311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 705 - 777
Target Start/End: Original strand, 21352055 - 21352127
Alignment:
Q  705 ctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| |||| |||||||||  |||||| | |||| ||||  ||||||||||||||||||||||| |||||||    
T  21352055 ctctctacatgtccaaatcatctaagcctattttctaccaatttttctactataggtgctacctccactctct 21352127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 662 - 758
Target Start/End: Complemental strand, 30679513 - 30679417
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactata 758  Q
    |||||||||||||||  |||| || || | |||||||| ||||||||| ||||  ||||||||  |||||| | |||| |||| |||||||||||||    
T  30679513 ctccatttgatctactattcttacgacgacatctacgggtctcctctctacatgcccaaatcatctaagcctattttctaccaacttttctactata 30679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 32756029 - 32755913
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| | ||| | |||| ||| ||| | ||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  32756029 cctccatttgatctactcttcttattacgacatcttcgggtcttccctctacatgaccaaaccatctaagcctattttctaccaacttttctactatagg 32755930  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  32755929 tgctacccccactctct 32755913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 605
Target Start/End: Original strand, 7601338 - 7601396
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    ||||||||||||||||||||||||| ||| |||||||||||| | || ||| ||||||||    
T  7601338 tttagtaacacggactttacctaac-atttgtcaaatgttacaagatctaaatagtaaca 7601396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 777
Target Start/End: Complemental strand, 28085483 - 28085368
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||||||||||||| ||||| || ||   || ||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| ||||||||||||||||    
T  28085483 ctccatttgatctactcttcttaccactttatttacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggt 28085384  T
Q  762 gctacctcgactctct 777  Q
    |||||| | |||||||    
T  28085383 gctacccccactctct 28085368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 768
Target Start/End: Original strand, 31832033 - 31832140
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || ||  ||| | ||||| |||| || ||||| |||| |||||| |||||||||| | |  ||||||||| || |||||||||    
T  31832033 cctccatctgatctactctacttgctatataatctccggaccttctctctacatgtccaaaccacttaagcctaatacccaccatctattttactatagg 31832132  T
Q  761 tgctacct 768  Q
    ||||||||    
T  31832133 tgctacct 31832140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 9593880 - 9593986
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| ||||| ||||||  ||||||   ||| ||||| ||||  ||||| ||| |||||| | |||| ||||||||||||||||  ||    
T  9593880 cctccatctgatctactcttcttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatgg 9593979  T
Q  761 tgctacc 767  Q
    |||||||    
T  9593980 tgctacc 9593986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 623
Target Start/End: Original strand, 10935800 - 10935862
Alignment:
Q  561 tttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaa 623  Q
    ||||||||||||||| ||||||||||||  || |||||||||||| ||| | | |||||||||    
T  10935800 tttacctaacaattgttcaaatgttactggatataattagtaacatttttcatgatttagtaa 10935862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 469 - 555
Target Start/End: Original strand, 30129611 - 30129697
Alignment:
Q  469 aaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaaca 555  Q
    ||||||||||| |||||||||| || |||||| |||||||| ||||    ||| ||| |||| ||||||||||| | ||||||||||    
T  30129611 aaaaagtgttagaaaaatataactaagtaacattttttaaaagttaccagtaagactgtaaaatgttactgaaggtctttagtaaca 30129697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 758
Target Start/End: Complemental strand, 5897521 - 5897480
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactata 758  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  5897521 ccaaaccacttaagcctattttccaccatcttttctactata 5897480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 763
Target Start/End: Original strand, 6906990 - 6907103
Alignment:
Q  650 gattggacaaccctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttt 749  Q
    |||| ||| ||||| ||| |||||||| || || ||||||||||||||   ||| ||||| ||||| |||||  || |||||| ||||   ||||||| |    
T  6906990 gatttgactaccctgcatctgatctactctccttactacaaaatctacatgtcttctctctacataaccaaactacgtaagcctagttctgaccatctat 6907089  T
Q  750 tctactataggtgc 763  Q
    ||||||||||||||    
T  6907090 tctactataggtgc 6907103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 813
Target Start/End: Original strand, 12134141 - 12134231
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcga----ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||| | ||||||||||||||||||||||||||  |||||| |    |||||||||||| ||||| |||||  ||| |||||| |||||    
T  12134141 taagcctattttccaccatcttttctactataggtcgtacctcaattctctctctaatattgtcatttctaattctatatcatcttgtctt 12134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 12592092 - 12592048
Alignment:
Q  384 tttttattctagacaactttgcgacagttttttacaacttctcaaa 429  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||    
T  12592092 tttttattctagacaaatttgcgaca-ctttttacaacttctcaaa 12592048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 761
Target Start/End: Complemental strand, 24665911 - 24665818
Alignment:
Q  669 tgatctacccttctaactacaaaa-tctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    |||||||| || || ||||||||| ||||| | ||| ||||| |||| |||||| ||| |||||| | |||| ||||| |||||||||||||||    
T  24665911 tgatctactctccttactacaaaaatctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 3e-44; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 385 - 640
Target Start/End: Complemental strand, 6403849 - 6403595
Alignment:
Q  385 ttttattctagacaactttgcgacagttttttacaacttctcaaattataaatatgtgacannnnnnna-tgttactagtaatacaaaaagtgttacaaa 483  Q
    ||||| ||||||| ||||||||||| ||||||||||||| |||||  ||| | ||||||||       | ||||||| || ||||||||| |||||||||    
T  6403849 ttttagtctagacgactttgcgacacttttttacaacttttcaaaaaatataaatgtgacatttttttagtgttactggtcatacaaaaaatgttacaaa 6403750  T
Q  484 aatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatg 583  Q
    | |||||||||| |||| ||||| | |||||   || ||  |||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  6403749 a-tataaatatgcaacatttttttactgttaca-attatgatataaaatgttactgaagctttttaataacacgggctttacctaacaattgctcaaatg 6403652  T
Q  584 ttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||||||||||| ||| ||| ||||||| |||  |||||||||||||    
T  6403651 ttactaaatttaattagtaacatttttcttaatttagttacaaatttcaattgttac 6403595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 375 - 637
Target Start/End: Complemental strand, 5000948 - 5000684
Alignment:
Q  375 gattcacaatt-tttattctagacaactttgcgacagttttttacaacttctcaaa-ttataaatatgtgacannnnnnn-atgttactagtaatacaaa 471  Q
    ||||||||||| |||| ||||||||||||||||||  ||||| ||||| ||||||| |||||||| |||||||        |||||||  || |||||||    
T  5000948 gattcacaattgtttagtctagacaactttgcgactcttttt-acaacatctcaaaattataaatgtgtgacatttttttcatgttacccgtgatacaaa 5000850  T
Q  472 aagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaaca 571  Q
    ||||||||| ||| || ||||| |||||| ||||  | ||||| |||||||||||||| || |||||  |||| ||||||||||| |  || |||||||     
T  5000849 aagtgttaccaaagtacaaataagtaacatttttcgagtgttactgataatactataacgtcttactctagctctttagtaacacaggtttcacctaact 5000750  T
Q  572 attggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgt 637  Q
    |||| |||||||||||||||||||||||||||||||||   | || |||||||| |||||||||||    
T  5000749 attgctcaaatgttactaaatttaattagtaacaattttgatgatgtagtaacaattttcaattgt 5000684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 465 - 640
Target Start/End: Complemental strand, 31347525 - 31347351
Alignment:
Q  465 atacaaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggacttta 564  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | |||||   |||||  |||||| ||||||||||| |  |||||||||| |  ||||    
T  31347525 atacaaaaagtgttacaaaa-tataaatatgtaacatttttttattgttacaaataatgatataaaatgttactgaagatggttagtaacacaggattta 31347427  T
Q  565 cctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
     |||||||||| |||||||||||||||||||||||||| || ||| ||| |||| || ||| ||||||||||||||    
T  31347426 tctaacaattgatcaaatgttactaaatttaattagtagcatttttcttgatttggttacaattttcaattgttac 31347351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 19369821 - 19370006
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||    
T  19369821 tgttactagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatgtaactaaaactctttagta 19369920  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||| |||||||||| || | |||| | ||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  19369921 acacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 19370006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 454 - 638
Target Start/End: Complemental strand, 19448637 - 19448452
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| | | ||| || || |||||||    
T  19448637 tgttactagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatataactaaaactctttagta 19448538  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||| |||||||||| || | |||| | ||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  19448537 acacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 19448452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 19532439 - 19532624
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| | | ||| || || |||||||    
T  19532439 tgttactagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttacagataatactataaaatataactaaaactctttagta 19532538  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||| |||||||||| || | |||| | ||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  19532539 acacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 19532624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 25637832 - 25637646
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||  || || |||| ||||||| |||||   ||||||||||||| ||| ||| ||  | |||||||    
T  25637832 tgttactagtgatacaaaaagtgttacaataatgtagcatttgcaacactttttaattgttaca-ataatactataaaatgtaactaaaattctttagta 25637734  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| |||||||||||||||| || | |||| ||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  25637733 acacgggctttacctaacaattgttcgagtgttgctaaatttaattagtaacagttttcttaatttagttacaattttcaagtgttac 25637646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 465 - 640
Target Start/End: Original strand, 5650866 - 5651043
Alignment:
Q  465 atacaaaaagtgttacaaaaatataaa--tatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactt 562  Q
    |||||||||||||||||| ||| |||   | ||| ||| | ||| |||||||| |||||||| ||||| ||  ||| ||||||||| |||||| ||  ||    
T  5650866 atacaaaaagtgttacaataatgtaacattttgtgacactatttgaatgttatagataataccataaaatgcaactaaagcttttttgtaacaagggttt 5650965  T
Q  563 tacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||| ||| ||| ||||||||| ||||||||| ||||||    
T  5650966 tacctaacaattgttcaaatgttgctaaattgaattagtaacatttttcttgatttagtaatagttttcaagtgttac 5651043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 502 - 640
Target Start/End: Original strand, 6801790 - 6801928
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 601  Q
    ||||| |||||||  | ||||||| |||| ||| ||| || || |||||||||| || |||||||||||||||| |||| ||||||||||||||||||||    
T  6801790 ttttttaatgttacagctaatactctaaaatgtaactaaaactctttagtaacaggggctttacctaacaattgttcaactgttactaaatttaattagt 6801889  T
Q  602 aacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||| |||  || ||||||||| ||||||||| ||||||    
T  6801890 aacatttttattgatttagtaatagttttcaagtgttac 6801928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 539 - 640
Target Start/End: Complemental strand, 29553732 - 29553631
Alignment:
Q  539 gaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||||||||||  ||||| |||||||||| ||||||||| ||||||||||||||||||| ||| ||| |||| || ||| ||||||||||||    
T  29553732 gaagctttttagtaacacgcgctttaactaacaattgctcaaatgttgctaaatttaattagtaacatttttcttgatttggttacaattttcaattgtt 29553633  T
Q  639 ac 640  Q
    ||    
T  29553632 ac 29553631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 661 - 813
Target Start/End: Original strand, 10824338 - 10824490
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| || |  ||||||||||||| |  |||  |||| | ||| ||||| ||| |||||| | |||| ||||||||||||||| ||||    
T  10824338 cctccatttgatctactctccatactacaaaatctatgagtcttttctctaaatacccaaaccacctaagcctattttcgaccatcttttctactttagg 10824437  T
Q  761 tgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||| |||| ||||||||||||||| ||| |||||| |||| |||||||||||    
T  10824438 tgctgcctcaactctctaatatttttatttctaatcatatcccatctagtctt 10824490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 5528932 - 5528745
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||| | |||||||||||||||||| ||| | | || ||  ||| ||||||| |||||  ||||||||| |||| ||| ||| || || |||||||    
T  5528932 tgttactaatgatacaaaaagtgttacaataatgttatatttgcgacactttttaactgttacagataatactgtaaaatgtaactaaaactctttagta 5528833  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||| ||||||| |||||||||| |  | |||| ||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  5528832 acacagactttatctaacaattgtttgagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 5528745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 717 - 812
Target Start/End: Complemental strand, 29700328 - 29700233
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtct 812  Q
    ||||| ||| |||||| | ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||| |||||| |||||||||||||||    
T  29700328 ccaaaccacctaagccaactttcctccatcttttctactataggtgctaccccaactctctaacattttcatttctaatcctatctcatctagtct 29700233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 517 - 640
Target Start/End: Original strand, 45356087 - 45356210
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  ||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  45356087 gatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 45356186  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||| ||||||    
T  45356187 ttagttacaattttcaagtgttac 45356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 546 - 640
Target Start/End: Original strand, 28249079 - 28249173
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  28249079 tttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 28249173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 736 - 813
Target Start/End: Complemental strand, 36143398 - 36143321
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||    
T  36143398 tttccaccatctattctgctataggtgctacctcgactctctaatcttttcctttctaatcctatctcatctagtctt 36143321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 465 - 640
Target Start/End: Original strand, 17634393 - 17634569
Alignment:
Q  465 atacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggacttt 563  Q
    ||||| |||||||||||| ||| ||| || ||  ||| ||||| | |||||  |||| ||||||||| ||| ||| ||  | ||||||||||||| ||||    
T  17634393 atacataaagtgttacaataatgtaatatttgcgacactttttgattgttacagatagtactataaaatgtaactaaatttctttagtaacacgggcttt 17634492  T
Q  564 acctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||| |||||| |||| ||||| |||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  17634493 acctatcaattgttcaagtgttattaaatttaattagtaacatttttcttgatttagttacaattttcaaatgttac 17634569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 454 - 638
Target Start/End: Complemental strand, 18767106 - 18766921
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| ||||||||| |||||||| ||| ||| || | | ||| ||||||| |||| |  ||||||||||||| ||| ||| || || |||||||    
T  18767106 tgttactagtgatacaaaaaatgttacaataatgtaacatttatgacactttttaattgttctatataatactataaaatgtaactaaaactctttagta 18767007  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    ||||| ||||||||||||||||| |  | |||| | ||||||||||| ||| | ||| ||| ||||||| ||| ||||||| ||||    
T  18767006 acacgtactttacctaacaattgtttgagtgttgcaaaatttaattaataatatttttcttgatttagttacaattttcaagtgtt 18766921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 25638932 - 25638809
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  |||||||||| ||  ||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  25638932 gatagtactataaaatgtaactaaaacactttagtaacatgggttttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 25638833  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||| ||||||    
T  25638832 ttagttacaattttcaagtgttac 25638809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 518 - 640
Target Start/End: Complemental strand, 29345556 - 29345433
Alignment:
Q  518 ataatactataaagtgttactgaagctt-tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    ||||||||||||| ||| ||| ||| || |||||||| | || |||||||||||||||| ||||| ||||||||||||||||||||| | ||| ||| ||    
T  29345556 ataatactataaaatgtaactaaagtttgtttagtaagaggggctttacctaacaattgttcaaaggttactaaatttaattagtaatatttttcttgat 29345457  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||| | ||||||    
T  29345456 ttagttacaattttcgagtgttac 29345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 518 - 604
Target Start/End: Complemental strand, 6223525 - 6223439
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaac 604  Q
    |||||| |||||||||| ||| || || ||||||||||||  |||||||||||||||   |||||||||||||||||||| ||||||    
T  6223525 ataatattataaagtgtaactaaaactctttagtaacacgcgctttacctaacaattttacaaatgttactaaatttaatcagtaac 6223439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 767
Target Start/End: Complemental strand, 9695683 - 9695633
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  9695683 ccaaaccacctaagccgagtttccaccatcttttctactataggtgctacc 9695633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 747 - 813
Target Start/End: Complemental strand, 33511378 - 33511312
Alignment:
Q  747 ttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||| ||||||| |||| | ||||||||||||||||||| |||||| |||||||| |||||||    
T  33511378 ttttctaccataggtgttaccccaactctctaatattttcatttctaatcatatctcatatagtctt 33511312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 767
Target Start/End: Original strand, 2776433 - 2776509
Alignment:
Q  691 aatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||||||| ||| ||||| ||||  ||||| ||| ||||||||||||| |||||| ||||||| ||||||||||||    
T  2776433 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 2776509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 813
Target Start/End: Original strand, 10080080 - 10080235
Alignment:
Q  660 ccctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatag 759  Q
    |||| |||||||||||| || || |||||||||||  | | ||| ||||| ||||  ||||| || | | ||| |||||||||||||||||||||| |||    
T  10080080 cccttcatttgatctactctccttactacaaaatcctcaggtcttctctctacatgcccaaacca-tcaggcctagtttccaccatcttttctact-tag 10080177  T
Q  760 gtgctacctcgactctct----aatattttcattcctaatcttatctcatctagtctt 813  Q
     ||||||||| |||||||    ||| || ||||| ||||||||||||| |||||||||    
T  10080178 atgctacctcaactctctctctaatgttgtcatttctaatcttatctcgtctagtctt 10080235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 36565415 - 36565531
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||||||||| || ||   |||||||| | | ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  36565415 cctccatttgatctacccttcttaccacggcatctacgggtattctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 36565514  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  36565515 tgctacccccactctct 36565531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 767
Target Start/End: Original strand, 41444550 - 41444606
Alignment:
Q  711 acatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||| |||||| ||| ||| || ||||||||||||||||||||||||||||||||||    
T  41444550 acatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctacc 41444606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 736 - 813
Target Start/End: Original strand, 44681288 - 44681369
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctc----gactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||||||||||| ||||||||||||| |    | ||||||||| || ||||| ||||||||||||| |||||||||    
T  44681288 tttccaccatcttttctattataggtgctaccacaactgtctctctaatgttgtcatttctaatcttatctcgtctagtctt 44681369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 502 - 633
Target Start/End: Complemental strand, 14997761 - 14997630
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 601  Q
    ||||| |||||||  | ||||||||||||  || ||| ||||| |||||||||| ||  ||||||||||||||   ||||||||||||| |||||  |||    
T  14997761 tttttgaatgttacagttaatactataaaaggtaactaaagctctttagtaacatgggttttacctaacaattctacaaatgttactaattttaaccagt 14997662  T
Q  602 aacaatttcctttatttagtaacagttttcaa 633  Q
    |||| ||| ||| | ||||||| | |||||||    
T  14997661 aacatttttcttgaattagtaataattttcaa 14997630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 741 - 813
Target Start/End: Complemental strand, 45419265 - 45419191
Alignment:
Q  741 accatcttttctactataggtgctacctcga--ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||||||||||||||||||||||||| | |  |||||||||  | ||||||||||||||||| | |||||||||    
T  45419265 accatcttttctactataggtgctaccccaattctctctaatggtgtcattcctaatcttatcccttctagtctt 45419191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 727 - 789
Target Start/End: Original strand, 18474200 - 18474262
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctctaatattttcatt 789  Q
    |||||| ||||||||||||| |||||||||||||||||||    ||||||||||||| |||||    
T  18474200 taagcctagtttccaccatcatttctactataggtgctactctaactctctaatattgtcatt 18474262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 605
Target Start/End: Original strand, 31369072 - 31369169
Alignment:
Q  508 aatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    ||||| ||||||||| ||||||| ||| |||||| || ||||||||||    |||||| ||||| ||| | |||||| |||||| |||||||||||||    
T  31369072 aatgtgattgataatcctataaaatgtaactgaaactctttagtaacataagctttacataacatttgtttaaatgtcactaaacttaattagtaaca 31369169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 718 - 766
Target Start/End: Complemental strand, 12611586 - 12611538
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    |||| ||| |||||| |||||||||||||||||||||| ||||||||||    
T  12611586 caaaccacctaagcctagtttccaccatcttttctactttaggtgctac 12611538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 18125281 - 18125165
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||||||||||||  |||| || ||   |||||||| ||| ||||| |||| | |||| ||  |||||| | |||| |||| |||||||||||||||    
T  18125281 cctccatttgatctactattcttacgacggcatctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactatagg 18125182  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  18125181 tgctacccccactctct 18125165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 36545257 - 36545141
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  36545257 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 36545158  T
Q  761 tgctacctcgactctct 777  Q
    || |||| | |||||||    
T  36545157 tgttacccccactctct 36545141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 40813432 - 40813316
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||| ||||| ||||| ||||  ||||| ||  ||| || | |||| |||| |||||||||||||||    
T  40813432 cctccatttgatctactcttcttaccacggcatctacagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactatagg 40813333  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  40813332 tgctacccccactctct 40813316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 42493536 - 42493596
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||| |||||| ||||||||| ||||||||||||||||||| |||| | |||||||    
T  42493536 ccaaaccacctaagcctagtttccacaatcttttctactataggtgttaccccaactctct 42493596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 813
Target Start/End: Complemental strand, 16705847 - 16705714
Alignment:
Q  684 actacaaaatctacggatctcctctccacatat--ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcga--ctctctaa 779  Q
    |||||||||| ||| | ||| ||||| ||||||  |||||  ||||||||| ||| ||||||||||||| |||||||| ||||||  | |  ||||||||    
T  16705847 actacaaaatatacaggtcttctctctacatatgcccaaactacttaagcctagtctccaccatcttttttactatagatgctactccaactctctctaa 16705748  T
Q  780 tattttcattcctaatcttatctcatctagtctt 813  Q
    | || ||||| |||||  |||| |||||||||||    
T  16705747 tgttgtcatttctaattctatcccatctagtctt 16705714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 777
Target Start/End: Complemental strand, 25985554 - 25985511
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| ||||||||||||||||||||||||||| | |||||||    
T  25985554 agtttctaccatcttttctactataggtgctaccccaactctct 25985511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 727 - 765
Target Start/End: Complemental strand, 7103312 - 7103274
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgcta 765  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  7103312 taagcctagtttctaccatcttttctactataggtgcta 7103274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 665 - 767
Target Start/End: Original strand, 12491316 - 12491418
Alignment:
Q  665 catttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgct 764  Q
    |||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||||||    
T  12491316 catttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 12491415  T
Q  765 acc 767  Q
    |||    
T  12491416 acc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 767
Target Start/End: Complemental strand, 39946965 - 39946859
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||| | ||| || || |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  39946965 cctccatttgatctactcttcttacgacggcatctacaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 39946866  T
Q  761 tgctacc 767  Q
    |||||||    
T  39946865 tgctacc 39946859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 718 - 801
Target Start/End: Complemental strand, 44373827 - 44373740
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgact----ctctaatattttcattcctaatcttatc 801  Q
    |||| |||| ||||| | |||||||||||||||||||| ||||||||||  | |||    |||||||||||||||| |||||| ||||    
T  44373827 caaaccactcaagcctattttccaccatcttttctactttaggtgctactccaactctcactctaatattttcatttctaatcctatc 44373740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 758
Target Start/End: Complemental strand, 6483341 - 6483268
Alignment:
Q  685 ctacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactata 758  Q
    ||||||||||| |||| || | ||| ||||  ||||| ||| |||||| |||||||||| ||||||||||||||    
T  6483341 ctacaaaatctccggaacttccctctacatgcccaaaccacctaagccaagtttccaccctcttttctactata 6483268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 777
Target Start/End: Original strand, 13171898 - 13171939
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||||||||||||||||||||||||||| || | |||||||    
T  13171898 tttccaccatcttttctactataggtgcttccccaactctct 13171939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 36395123 - 36395240
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatca-cttaagccgagtttccaccatcttttctactatag 759  Q
    |||||||||||||||| ||||| || ||   |||||| | ||| ||||| ||||  ||||| || || ||||| | |||| |||| ||||||||||||||    
T  36395123 cctccatttgatctactcttcttaccacggcatctacaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactatag 36395222  T
Q  760 gtgctacctcgactctct 777  Q
    |||||||| | |||||||    
T  36395223 gtgctacccccactctct 36395240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 1e-43; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 470 - 640
Target Start/End: Complemental strand, 26708031 - 26707861
Alignment:
Q  470 aaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaa 569  Q
    ||||||||||||||||||| |||||  |||||||||| | ||||| ||| |||||||| || |||||||||| || ||||||||||  ||||||||||||    
T  26708031 aaaagtgttacaaaaatatgaatatacaacagttttttactgttactgagaatactatgaaatgttactgaacctctttagtaacagagactttacctaa 26707932  T
Q  570 caattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||  ||||||| ||||||    
T  26707931 caattgttcaaatgttactaaatttaattagtaacatttttcttgatttagtaaccattttcaaatgttac 26707861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 638
Target Start/End: Original strand, 16457314 - 16457427
Alignment:
Q  525 tataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaac 624  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||| ||    
T  16457314 tataaaatgttactgaagctttttagtaacacgagctttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgatttagttac 16457413  T
Q  625 agttttcaattgtt 638  Q
    | ||||||||||||    
T  16457414 aattttcaattgtt 16457427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 470 - 595
Target Start/End: Complemental strand, 26735806 - 26735681
Alignment:
Q  470 aaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaa 569  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||| | |||||||||| || ||||| ||||||| |||||||||| ||| |||||||||    
T  26735806 aaaagtgttacaaaaatatgaatatacaacagttttttaatgttactaataatactatgaaatgttattgaagctctttagtaacatggattttacctaa 26735707  T
Q  570 caattggtcaaatgttactaaattta 595  Q
    |||||| |||||||||||||||||||    
T  26735706 caattgttcaaatgttactaaattta 26735681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 454 - 640
Target Start/End: Original strand, 1627857 - 1628045
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaa-aatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagt 551  Q
    |||||||||| ||| ||||||| ||||||| ||| ||| || ||  ||| ||||||| |||||   ||||||||||||| ||| ||| || || ||| ||    
T  1627857 tgttactagtgatataaaaagtattacaaataatgtaacatttgcgacactttttaattgttacatataatactataaaatgtaactaaaactcttttgt 1627956  T
Q  552 aacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||| | ||| ||| ||||||| ||| ||||||| ||||||    
T  1627957 aacacggactttacttaacaattgttcaagtgttactaaatttaattagtaatatttttcttgatttagttacaattttcaagtgttac 1628045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 454 - 619
Target Start/End: Original strand, 2943126 - 2943291
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaa 553  Q
    |||||| ||| |||||||||||||||||| | | |||   ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || |  ||||||||    
T  2943126 tgttaccagtgatacaaaaagtgttacaatagtgtaacattgcgacactttttaattgttacagataatactataaaatgtaactaaaacactttagtaa 2943225  T
Q  554 cacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttattta 619  Q
    ||||| ||| |||||||||||| || |||||||||||||||||||||||||| ||| ||| |||||    
T  2943226 cacgggcttaacctaacaattgttcgaatgttactaaatttaattagtaacatttttcttgattta 2943291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 537 - 640
Target Start/End: Original strand, 1613208 - 1613311
Alignment:
Q  537 ctgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattg 636  Q
    |||||||| |||||||||| || |||||||||| |||||||||| |||||||||||||| ||||||||| ||| ||| ||||||| ||| ||||||| ||    
T  1613208 ctgaagctatttagtaacaggggctttacctaaaaattggtcaactgttactaaatttatttagtaacatttttcttgatttagttacatttttcaactg 1613307  T
Q  637 ttac 640  Q
    ||||    
T  1613308 ttac 1613311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 454 - 640
Target Start/End: Original strand, 7407665 - 7407852
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||| ||| |||||||||||||||||| ||  ||  || ||  ||| ||||| | ||||| ||||| ||||||||| ||| ||| || |  |||||||    
T  7407665 tgttacaagtgatacaaaaagtgttacaataaggtaccatttgcgacactttttgattgttactgatagtactataaaatgtaactaaaacactttagta 7407764  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| |||||||||||||||| |||| |||| ||||||||||||||||| | ||| ||| ||||||| ||| ||||||| ||||||    
T  7407765 acacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaatatttttcttgatttagttacaattttcaagtgttac 7407852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 638
Target Start/End: Complemental strand, 13846117 - 13845996
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  ||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  13846117 gatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 13846018  T
Q  617 ttagtaacagttttcaattgtt 638  Q
    ||||| ||| ||||||| ||||    
T  13846017 ttagttacaattttcaagtgtt 13845996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 546 - 640
Target Start/End: Complemental strand, 2550262 - 2550168
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||| | |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  2550262 tttagtaacacaggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagttacaattttcaagtgttac 2550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 571 - 640
Target Start/End: Original strand, 27259474 - 27259543
Alignment:
Q  571 aattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  27259474 aattgttcaaatgttactaaatttaattagtaacattttgcttgatttagtaatagttttcaattgttac 27259543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 659 - 813
Target Start/End: Original strand, 36820133 - 36820289
Alignment:
Q  659 accctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactata 758  Q
    |||||| |||||||||||||| || |||||| |||||| || ||| ||||  |||| || ||| ||| |||||| |||||||||||||||| ||| ||||    
T  36820133 accctctatttgatctaccctccttactacataatctatgggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatata 36820232  T
Q  759 ggtgctacctcga--ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||||||| | |  ||||||||| |  ||||| |||||| |||||| |||||||||    
T  36820233 ggtgctaccccaactctctctaatgtcgtcatttctaatcctatctcgtctagtctt 36820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 518 - 602
Target Start/End: Complemental strand, 36035413 - 36035329
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagta 602  Q
    ||||||||||||| ||| ||| ||||| ||||||||||||  ||||||||||||||||  ||| |||||||||||||||||||||    
T  36035413 ataatactataaaatgtaactaaagctctttagtaacacgagctttacctaacaattgtacaattgttactaaatttaattagta 36035329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 1654701 - 1654578
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  |||| |||||| | |||||| ||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  1654701 gatagtactataaaatgtaactaaaacactttaataacacaggctttacttaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 1654602  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||||||||||    
T  1654601 ttagttacaattttcaattgttac 1654578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 5498668 - 5498480
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaa---tataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttag 550  Q
    |||||| ||||||| | |||||||||||||||   |||||| | |||| | ||| | ||||||| | ||||||| ||||| | ||||  || || |||||    
T  5498668 tgttaccagtaatatataaagtgttacaaaaaaaatataaacaagtaatactttatgaatgttactaataatac-ataaaatattaccaaaactctttag 5498570  T
Q  551 taacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||  |  ||||||||||||||| ||| | ||||||||||||||||||||||| ||| ||| ||||||| ||| |||| |||||||||    
T  5498569 taacataggttttacctaacaattgttcagaagttactaaatttaattagtaacatttttcttgatttagttacattttttaattgttac 5498480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 640
Target Start/End: Original strand, 9633446 - 9633540
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||| || |||||||||||||||| | |||||| |||||||||||||||||||| |||  |  ||||||||| ||||||||| ||||||    
T  9633446 tttagtaacaggggctttacctaacaattgtttaaatgtaactaaatttaattagtaacatttttttcgatttagtaatagttttcaagtgttac 9633540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 41842685 - 41842791
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||  | |||||| ||||||| | ||| ||||| ||||| ||||| ||| |||| |  ||||||||||||||||||||||||||    
T  41842685 cctccatttgatctactctcattactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactatagg 41842784  T
Q  761 tgctacc 767  Q
    |||||||    
T  41842785 tgctacc 41842791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 661 - 769
Target Start/End: Original strand, 47233770 - 47233878
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| |||||||| ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  47233770 cctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 47233869  T
Q  761 tgctacctc 769  Q
    |||||||||    
T  47233870 tgctacctc 47233878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 767
Target Start/End: Original strand, 31337757 - 31337806
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  31337757 caaaccacttaagcctagtttcaaccatcttttctactataggtgctacc 31337806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 775
Target Start/End: Complemental strand, 26490373 - 26490309
Alignment:
Q  711 acatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactct 775  Q
    |||| |||||| ||| |||||| | |||| ||||||||||||||||||||||||||||| |||||    
T  26490373 acatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcaactct 26490309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 625
Target Start/End: Complemental strand, 35083171 - 35082993
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataaa-------tatgtaacagtttttaaatgttattgataatactataaagtgttactgaagcttt 546  Q
    |||||||||| || ||||||||||||||| |||||||        | ||| ||| ||||||||||| |  |||||||||||||| ||| ||| |||||      
T  35083171 tgttactagtgatgcaaaaagtgttacaataatataacattttgttttgtgacactttttaaatgtcagagataatactataaattgtaactaaagctca 35083072  T
Q  547 ttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaaca 625  Q
    ||  ||||| ||  |||| |||||||||| |||||| |||||||||||| ||| ||||| ||| ||| |||| ||||||    
T  35083071 tttctaacaagggttttatctaacaattgttcaaatattactaaatttatttactaacatttttcttgattttgtaaca 35082993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 736 - 813
Target Start/End: Original strand, 39600930 - 39601011
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcga----ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||||||||||||||||||| ||||| | |    ||||||||| || ||||| ||||||||||| |||||||||||    
T  39600930 tttccaccatcttttctactataggtactaccccaactctctctctaatgttgtcatttctaatcttatcccatctagtctt 39601011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 813
Target Start/End: Original strand, 42510190 - 42510341
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || || || ||||||||||  | ||| ||||  |||| |||||| ||| |||||| | ||||||| |||||||||||||||||    
T  42510190 cctccatctgatctactctccttaccacaaaatctataggtcttctct--acatgtccaaaccacctaagcctattttccactatcttttctactatagg 42510287  T
Q  761 tgctacctcgactctctaatattttc-attcctaatcttatctcatctagtctt 813  Q
    ||||| | | |||| ||| |||| || ||| |||| | |||| |||||||||||    
T  42510288 tgctatcccaactccctagtattatcaatttctaaacctatcccatctagtctt 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 51447884 - 51447990
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||||||| ||||| ||||  |||||  |  |||||| | |||| |||| |||||||||||||||    
T  51447884 cctccatttgatctactcttcttaccacggcatctacggatcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactatagg 51447983  T
Q  761 tgctacc 767  Q
    |||||||    
T  51447984 tgctacc 51447990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 735 - 801
Target Start/End: Complemental strand, 55244332 - 55244266
Alignment:
Q  735 gtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatc 801  Q
    |||||||||||||||||||||||||||| | |  | |||||||||| || ||||| |||||||||||    
T  55244332 gtttccaccatcttttctactataggtgttgcaccaactctctaatgttgtcattactaatcttatc 55244266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 777
Target Start/End: Complemental strand, 35033223 - 35033138
Alignment:
Q  692 atctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||||||||| | |||||||    
T  35033223 atctacgggtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgctacccccactctct 35033138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 22180 - 22065
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||||| |||||| ||||| || ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  22180 cctccatttaatctactcttcttacaacggcatctacgggtcttctctctacatgtccaaaccatctaagccta-tttctaccaacttttctactatagg 22082  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  22081 tgctacccccactctct 22065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 632
Target Start/End: Complemental strand, 2180066 - 2179935
Alignment:
Q  503 ttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagta 602  Q
    |||| |||||||  ||||| |||||||| | | ||| ||||| |||||||||| ||| |||||| || ||||| ||||||| | ||||||||||| | ||    
T  2180066 ttttgaatgttaaagataacactataaaatataactaaagctctttagtaacagggaatttacccaagaattgttcaaatgattctaaatttaatcatta 2179967  T
Q  603 aca--atttcctttatttagtaacagttttca 632  Q
    |||   |||  |||||||||||||| ||||||    
T  2179966 acatttttttttttatttagtaacaattttca 2179935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 5168940 - 5168824
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| |||||||| ||   |||||||| ||| ||||| |||| | |||| ||  |||||  | |||| |||| ||||||||| |||||    
T  5168940 cctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccatagg 5168841  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  5168840 tgctacccccactctct 5168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 508 - 604
Target Start/End: Original strand, 27713405 - 27713501
Alignment:
Q  508 aatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaac 604  Q
    ||||||| | ||||||||||||| | || || || || ||||||||||  |  ||| ||||||||||  | ||||||||||||||||||||||||||    
T  27713405 aatgttactaataatactataaaatattgctaaaactatttagtaacataggttttgcctaacaattatttaaatgttactaaatttaattagtaac 27713501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 727 - 779
Target Start/End: Complemental strand, 38430890 - 38430838
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctctaa 779  Q
    |||||| | |||| ||||||||||||||||||||||||||||| || ||||||    
T  38430890 taagcctattttctaccatcttttctactataggtgctacctcaacgctctaa 38430838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 49503784 - 49503844
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||| |||||| | |||| ||||||||||||||||||||||||||||  |||||||    
T  49503784 ccaaaccacctaagcctattttctaccatcttttctactataggtgctacctgaactctct 49503844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 764
Target Start/End: Complemental strand, 19737105 - 19737002
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| ||||| ||||||| |||||| | ||| |||||  |||   |||| ||| ||| || | |||| ||||||||||||||||||||    
T  19737105 cctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactatagg 19737006  T
Q  761 tgct 764  Q
    ||||    
T  19737005 tgct 19737002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 764
Target Start/End: Complemental strand, 19758008 - 19757905
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| ||||| ||||||| |||||| | ||| |||||  |||   |||| ||| ||| || | |||| ||||||||||||||||||||    
T  19758008 cctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactatagg 19757909  T
Q  761 tgct 764  Q
    ||||    
T  19757908 tgct 19757905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 776
Target Start/End: Original strand, 50960863 - 50960922
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctc 776  Q
    ||||| ||| |||||| | |||| ||||||||||||||||||||||||||| | ||||||    
T  50960863 ccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaactctc 50960922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 796
Target Start/End: Original strand, 54365225 - 54365287
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcga--ctctctaatattttcattcctaatc 796  Q
    ||||| |||| ||||||||||||||||||||| | |  |||||||||||||||||| ||||||    
T  54365225 tttccgccatattttctactataggtgctaccccaactctctctaatattttcatttctaatc 54365287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 767
Target Start/End: Complemental strand, 54128430 - 54128380
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||| ||| |||||| | |||| |||||||||||||||||||||||||||    
T  54128430 ccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 54128380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 777
Target Start/End: Original strand, 34719321 - 34719362
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||||||||||||||||| |||||||||||| | |||||||    
T  34719321 tttccaccatcttttctacgataggtgctaccccaactctct 34719362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 780
Target Start/End: Original strand, 39535680 - 39535733
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctctaat 780  Q
    ||||||| ||||| |||||||||||||||||||||| | || | ||||||||||    
T  39535680 taagccgggtttctaccatcttttctactataggtgttgccccaactctctaat 39535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 753
Target Start/End: Original strand, 44443441 - 44443470
Alignment:
Q  724 acttaagccgagtttccaccatcttttcta 753  Q
    ||||||||||||||||||||||||||||||    
T  44443441 acttaagccgagtttccaccatcttttcta 44443470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 7e-42; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 383 - 572
Target Start/End: Complemental strand, 48465633 - 48465443
Alignment:
Q  383 atttttattctagacaactttgcgacagttttttacaacttctcaaattataaatatgtgacannnnnnn--atgttactagtaatacaaaaagtgttac 480  Q
    ||||||| | |||||| |||||| ||| ||||| |||||||||||||||||||| |||| |||         |||| ||||||||||||||||||||| |    
T  48465633 atttttagtatagacagctttgcaacaattttt-acaacttctcaaattataaaaatgttacatttttttttatgtcactagtaatacaaaaagtgttgc 48465535  T
Q  481 aaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaa 572  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||  | ||||||||||||    
T  48465534 aaaaatataaatatgtaactgtttttaaatgttactgataatactataaaatgttactgaaactttttagtaacacaaattttacctaacaa 48465443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 465 - 595
Target Start/End: Complemental strand, 21317612 - 21317485
Alignment:
Q  465 atacaaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggacttta 564  Q
    |||||||||||||||||||||||||||   |||||| ||||| |||||||||| |||||| ||||| ||||| |||||| |||||||||||| | |||||    
T  21317612 atacaaaaagtgttacaaaaatataaa---gtaacactttttgaatgttattggtaatacaataaaatgttagtgaagcattttagtaacacagccttta 21317516  T
Q  565 cctaacaattggtcaaatgttactaaattta 595  Q
    ||||||||||| | |||||||||||||||||    
T  21317515 cctaacaattgttgaaatgttactaaattta 21317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 466 - 640
Target Start/End: Original strand, 24558918 - 24559093
Alignment:
Q  466 tacaaaaagtgttacaaaaa-tataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggacttta 564  Q
    ||||||||||||| |||||| |||||| | |||||| ||| | ||||||| ||||||||||||||| | | ||| ||  | ||||||||||| | | |||    
T  24558918 tacaaaaagtgttccaaaaaatataaacaagtaacaatttatgaatgttactgataatactataaaatatcactaaaattctttagtaacacagccgtta 24559017  T
Q  565 cctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||| ||| ||||||| ||| |||| |||||||||    
T  24559018 cctaacaatcgttcaaatgttactaaatttaattagtaacatttttcttgatttagttacattttttaattgttac 24559093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 1684863 - 1685048
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| | | ||| || ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||    
T  1684863 tgttactagtgatacaaaaagtgttacaatattgtaacatttgcgacactttttaattgttacagataatactataaattgtaactaaaactctttagta 1684962  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||| |||||||||| || | |||| | ||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  1684963 acacggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacatttttcttgatttagttacaattttcaagtgtt 1685048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 638
Target Start/End: Complemental strand, 1152233 - 1152048
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||  ||||||| |||||| ||| ||| || || |||||||    
T  1152233 tgttactagtgatacaaaaagtgttacaataatgtaacatttgagacactttttaattgttacagataatattataaactgtaactaaaactctttagta 1152134  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    |||||||||||| |||||||||| |  | |||| | ||||||||||||||||| ||| ||| ||||||| ||| ||||||| ||||    
T  1152133 acacggactttatctaacaattgtttgagtgttgcaaaatttaattagtaacatttttcttaatttagttacaattttcaagtgtt 1152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 454 - 640
Target Start/End: Original strand, 47065945 - 47066132
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||||| | | ||| || ||  ||| ||||| | |||||  |||| ||||||||| ||| ||| || || ||| |||    
T  47065945 tgttactagttatacaaaaagtgttacaatagtgtaacatttgcgacactttttgattgttacggatagtactataaaatgtaactaaaactctttggta 47066044  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||| ||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  47066045 acacgggctttacctaacaattgttcaggtgttactaaatttaattactaacatttttcttgatttagttacaattttcaagtgttac 47066132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 546 - 640
Target Start/End: Original strand, 4881073 - 4881167
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||||||||||||||||||   ||||| |||||||||||||| ||||||| ||| ||| ||||||||||| ||||||| ||||||    
T  4881073 tttagtaacacggactttacctaacaattatacaaatattactaaatttaatcagtaacatttttcttgatttagtaacaattttcaagtgttac 4881167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 43600392 - 43600269
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  ||||||||||||| |||||||||||||||| |||| | || ||||||||||||||||||| ||| ||| ||    
T  43600392 gatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagttttgctaaatttaattagtaacatttttcttgat 43600293  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||| ||||||    
T  43600292 ttagttacaattttcaagtgttac 43600269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 635
Target Start/End: Complemental strand, 48464118 - 48464047
Alignment:
Q  564 acctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaatt 635  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||    
T  48464118 acctaacaattgttcaaatgttactaaatttaattagtaacatttttatttatttagtaacaattttcaatt 48464047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 465 - 605
Target Start/End: Original strand, 37750913 - 37751053
Alignment:
Q  465 atacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggacttt 563  Q
    |||||||||||||||||| ||| ||| || ||  ||| ||||| ||||| || |||||||||||||| ||| ||| |||||| |||||||||  | ||||    
T  37750913 atacaaaaagtgttacaataatgtaacatttgcgacattttttgaatgt-atagataatactataaaatgtaactaaagcttcttagtaacattggcttt 37751011  T
Q  564 acctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    | ||||||||||  ||||||||||| | ||||||||||||||    
T  37751012 atctaacaattgcgcaaatgttactgattttaattagtaaca 37751053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 517 - 621
Target Start/End: Original strand, 21539247 - 21539350
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||||||||| ||| ||| ||| || || |||||||||| |||||| | |||||||||| | ||||||||||||||||||| ||||||| ||||||| ||    
T  21539247 gataatactaaaaaatgtaactaaatctctttagtaacaaggactt-atctaacaattgtttaaatgttactaaatttaatcagtaacattttccttgat 21539345  T
Q  617 ttagt 621  Q
    |||||    
T  21539346 ttagt 21539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 662 - 777
Target Start/End: Complemental strand, 54470314 - 54470199
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||||||||| ||| || || |||||| ||| |||   ||| ||||| ||||  ||||| |||||||| | ||||||||||||||||||||||||||||    
T  54470314 ctccatttgatttactctccttactacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggt 54470215  T
Q  762 gctacctcgactctct 777  Q
    |||||| | |||||||    
T  54470214 gctaccccaactctct 54470199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 546 - 640
Target Start/End: Original strand, 4904144 - 4904238
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||| |  ||||||||||||||||  |||||||||||||||||||| ||||||| ||| | | ||||||||||| |||| || ||||||    
T  4904144 tttagtaacaagtgctttacctaacaattgtacaaatgttactaaatttaatcagtaacatttttcatgatttagtaacaatttttaagtgttac 4904238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 663 - 777
Target Start/End: Complemental strand, 37797958 - 37797844
Alignment:
Q  663 tccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtg 762  Q
    |||||||||||||| ||||| || ||   ||||||| |||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||||    
T  37797958 tccatttgatctactcttcttacgacggcatctacgaatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtg 37797859  T
Q  763 ctacctcgactctct 777  Q
    ||||||| |||||||    
T  37797858 ctacctccactctct 37797844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 662 - 766
Target Start/End: Original strand, 22420889 - 22420993
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    |||||| | |||||| ||||| | |||||||||| | ||||| ||||| |||| |||||||||| |||||| || ||||||||||||||| |||| || |    
T  22420889 ctccatcttatctactcttcttattacaaaatcttcagatcttctctctacatgtccaaatcacctaagcctagcttccaccatcttttccactacagtt 22420988  T
Q  762 gctac 766  Q
    |||||    
T  22420989 gctac 22420993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 711 - 766
Target Start/End: Original strand, 42293473 - 42293528
Alignment:
Q  711 acatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    ||||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  42293473 acatacccaaaccacctaagccgagtttccatcatcttttctactataggtgctac 42293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 734 - 801
Target Start/End: Original strand, 43070015 - 43070082
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatc 801  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||| || ||||| |||||| ||||    
T  43070015 agtttccaccatcatttctactataggcgctacctcaactctctaatgttgtcatttctaatcctatc 43070082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 53300476 - 53300353
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||| ||||| ||| ||| || || ||| ||||||||| |||||||||||||||| | |  |||||||||||||||||| ||||| ||| ||| ||    
T  53300476 gatagtacgataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgtttaggtgttactaaatttaattactaacatttttcttgat 53300377  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||| | ||| ||||||| ||||||    
T  53300376 ttaattacaattttcaagtgttac 53300353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 775
Target Start/End: Complemental strand, 31459082 - 31459024
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactct 775  Q
    ||||| ||| |||||| | |||| |||||||||||||||||||||||||||||||||||    
T  31459082 ccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcgactct 31459024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 777
Target Start/End: Complemental strand, 41192921 - 41192828
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| ||||||| | ||| ||||| ||||   |||||||| |||| | |||||||||||||||||||||| ||||||||||| | |||||||    
T  41192921 actacagaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaactctct 41192828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 767
Target Start/End: Original strand, 49738835 - 49738884
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  49738835 caaatcacctaagccgagtttctaccatcttttctacaataggtgctacc 49738884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 727 - 813
Target Start/End: Original strand, 51252701 - 51252789
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcga--ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||| ||||||||||||||||||||||| |||||||||| | |  ||||||||| |  ||||| |||||| |||||| |||||||||    
T  51252701 taagcctagtttccaccatcttttctactagaggtgctaccccaactctctctaatgtagtcatttctaatcctatctcgtctagtctt 51252789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 436337 - 436221
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||| | ||| ||||| ||||  ||||||||  |||||| | |||| |||| |||||||||||||||    
T  436337 cctccatttgatctactcttcttaccacggcatctacaggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactatagg 436238  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  436237 tgctacccccactctct 436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 31959988 - 31960104
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  31959988 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 31960087  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  31960088 tgctacccccactctct 31960104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 48174267 - 48174383
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||||||  |||||| | |||| |||| |||||||||||||||    
T  48174267 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactatagg 48174366  T
Q  761 tgctacctcgactctct 777  Q
    || |||| | |||||||    
T  48174367 tgttacccccactctct 48174383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 52569689 - 52569805
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  52569689 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 52569788  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  52569789 tgctacccccactctct 52569805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 53707902 - 53707786
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||| ||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  53707902 cctccatttgatatactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 53707803  T
Q  761 tgctacctcgactctct 777  Q
    ||||||||| |||||||    
T  53707802 tgctacctccactctct 53707786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 742 - 813
Target Start/End: Complemental strand, 10209061 - 10208990
Alignment:
Q  742 ccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||||||||||||||| ||||| | |||||||||| || ||||| |||||  |||| |||||||||||    
T  10209061 ccatcttttctactataggttctaccccaactctctaatgttgtcatttctaattctatcccatctagtctt 10208990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 662 - 777
Target Start/End: Original strand, 27450354 - 27450469
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| || ||| ||  |||||| | |||| |||| ||||||||||||||||    
T  27450354 ctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtcaaaaccatctaagcctattttctaccaacttttctactataggt 27450453  T
Q  762 gctacctcgactctct 777  Q
    |||||| | |||||||    
T  27450454 gctacccccactctct 27450469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 734 - 813
Target Start/End: Complemental strand, 45423650 - 45423571
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||| ||||||||||||| ||||||||||||||| ||||| |||| || ||||| |||||  |||| | |||||||||    
T  45423650 agtttctaccatcttttctattataggtgctacctcaactctataatgttgtcatttctaattctatcccgtctagtctt 45423571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 705 - 763
Target Start/End: Original strand, 42639238 - 42639296
Alignment:
Q  705 ctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgc 763  Q
    ||||| |||| |||||| ||| ||||||  |||||||||||||||||||||||||||||    
T  42639238 ctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgc 42639296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 639
Target Start/End: Original strand, 26075290 - 26075347
Alignment:
Q  582 tgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtta 639  Q
    |||||||||||||| |||||||| |||| ||| || |||||||| |||||||||||||    
T  26075290 tgttactaaatttacttagtaaccattttcttgatctagtaacaattttcaattgtta 26075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 777
Target Start/End: Complemental strand, 33710009 - 33709916
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| |||| || | ||| ||||||||||  | ||| ||| ||| || ||||||||||||||||||||||||||||| |||| | |||||||    
T  33710009 actacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttaccccaactctct 33709916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 4440961 - 4440845
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || |||  |||||||| ||| ||||| | ||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  4440961 cctccatttgatctactcttcttaccacagcatctacgggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactatagg 4440862  T
Q  761 tgctacctcgactctct 777  Q
    |||| || | |||||||    
T  4440861 tgctgcccccactctct 4440845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 734 - 810
Target Start/End: Complemental strand, 30807625 - 30807549
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagt 810  Q
    |||||| |||||||||||||||||| ||||||| || ||||||| || |  |||||||||||  |||| ||||||||    
T  30807625 agtttctaccatcttttctactatatgtgctacatcaactctcttatgtcgtcattcctaattctatcacatctagt 30807549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 767
Target Start/End: Original strand, 35555831 - 35555927
Alignment:
Q  671 atctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||||| || ||||||||| |||| || | ||| ||||| | ||  ||||| ||| |||| | |||||| |||||||||||||||||||||||||||    
T  35555831 atctactctcctaactacagaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacc 35555927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 43434032 - 43433916
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||| ||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  43434032 cctccatttgatttactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 43433933  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  43433932 tgctacccccactctct 43433916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 50471578 - 50471518
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||||||| || ||||||||||||||||||||||||  |||||||| ||| |||||    
T  50471578 ccaaaccacttaaacctagtttccaccatcttttctactattagtgctaccccgagtctct 50471518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 767
Target Start/End: Original strand, 38903917 - 38904000
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||||||||||||   ||| ||||||||||   |||| ||  |||||||||||||||||||||||||||  || |||||||||    
T  38903917 actacaaaatctacaagtcttctctccacatgctcaaaccaactaagccgagtttccaccatcttttctatgatcggtgctacc 38904000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 727 - 777
Target Start/End: Complemental strand, 28236225 - 28236175
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| | ||||||||| |||||||||||||||||||||| | |||||||    
T  28236225 taagcctattttccaccaacttttctactataggtgctacccccactctct 28236175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 767
Target Start/End: Original strand, 30621434 - 30621484
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||||||| ||| || | ||||||||||||||||||||||| ||||||||    
T  30621434 ccaaatcacctaaacctattttccaccatcttttctactataagtgctacc 30621484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 711 - 777
Target Start/End: Original strand, 44047572 - 44047638
Alignment:
Q  711 acatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||| |||||| ||| |||||| || ||| |||| |||||||||||||||||||||| | |||||||    
T  44047572 acatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctaccccaactctct 44047638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 640
Target Start/End: Original strand, 26075222 - 26075295
Alignment:
Q  567 taacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||| || |||||||| ||||||| ||||||||||||| ||| || || ||||| ||||  ||||||||    
T  26075222 taacaattgttcgaatgttacaaaatttacttagtaacaattttcttgatctaataacaattttttattgttac 26075295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 27739750 - 27739807
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaatt 574  Q
    |||||||||||||| ||| ||| ||||| || ||||||| || |||||||||||||||    
T  27739750 gataatactataaaatgtaactaaagctcttcagtaacatgggctttacctaacaatt 27739807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 764
Target Start/End: Original strand, 46715612 - 46715649
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgct 764  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  46715612 taagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 762
Target Start/End: Complemental strand, 49987480 - 49987435
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtg 762  Q
    ||||| ||| |||||| | |||||||||||||||||||||||||||    
T  49987480 ccaaaccacctaagcctattttccaccatcttttctactataggtg 49987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 7e-36; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 9242395 - 9242580
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    ||||| |||| |||||||||||||||||| ||| ||| || ||  ||| ||||||| |||||| |||||||||||||| ||| ||| || || |||||||    
T  9242395 tgttaatagtgatacaaaaagtgttacaataatgtaacatttgcgacactttttaattgttatagataatactataaaatgtaactaaaactctttagta 9242494  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    ||| |||||||| |||||||||| |||| |||||| ||||||||||||||||||||| ||| ||||||| ||| ||||||| ||||    
T  9242495 acatggactttatctaacaattgttcaagtgttacaaaatttaattagtaacaattttcttgatttagttacaattttcaagtgtt 9242580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 518 - 640
Target Start/End: Complemental strand, 30089859 - 30089737
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatt 617  Q
    ||||||||||||| ||| ||| ||||| |||||||||| || |||| ||||||||||| |||||||||||||||| |||| ||||||| ||| ||| |||    
T  30089859 ataatactataaaatgtaactaaagctctttagtaacatgggcttttcctaacaattgttcaaatgttactaaatataatcagtaacatttttcttgatt 30089760  T
Q  618 tagtaacagttttcaattgttac 640  Q
    |||||||||||||||| ||||||    
T  30089759 tagtaacagttttcaagtgttac 30089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 470 - 590
Target Start/End: Complemental strand, 26701201 - 26701083
Alignment:
Q  470 aaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaa 569  Q
    ||||||||||||||| |||||||||| |||| ||| | ||||||| | ||||||| ||||||||||||||||| | ||||||||||||| ||||||||||    
T  26701201 aaaagtgttacaaaa-tataaatatgcaacattttctgaatgttactaataatac-ataaagtgttactgaagttatttagtaacacgggctttacctaa 26701104  T
Q  570 caattggtcaaatgttactaa 590  Q
    ||||||| ||| |||||||||    
T  26701103 caattggccaactgttactaa 26701083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 502 - 640
Target Start/End: Complemental strand, 3234467 - 3234329
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaa-ttggtcaaatgttactaaatttaattag 600  Q
    ||||| ||||||| | |||||||  |||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| | ||||    
T  3234467 tttttgaatgttactaataatacattaaa-tgttactgaagctatttagtaacacggactttacctaataaattggtcaaatgttactaaattaatttag 3234369  T
Q  601 taacaatttcctttatttagtaacagttttcaattgttac 640  Q
    || || |||  |||||||||| ||| ||||||| ||||||    
T  3234368 taccatttttttttatttagttacatttttcaactgttac 3234329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 502 - 640
Target Start/End: Original strand, 26621051 - 26621189
Alignment:
Q  502 tttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagt 601  Q
    ||||| |||||||  |||||||||||||| ||| ||| ||||| |||||||||| ||  |||| |||||||||| | ||||||| ||||||||||| |||    
T  26621051 tttttgaatgttacagataatactataaaatgtaactaaagctctttagtaacatggcttttatctaacaattgtttaaatgttgctaaatttaatcagt 26621150  T
Q  602 aacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||| ||| ||| ||||||||||| ||||||| ||||||    
T  26621151 aacatttttcttaatttagtaacaattttcaagtgttac 26621189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 510 - 640
Target Start/End: Original strand, 26608507 - 26608637
Alignment:
Q  510 tgttattgataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaattt 609  Q
    |||||| |||| ||||||||| ||  ||| ||||| |||||||||| || ||||| |||||||||| ||||||||||||||||||||| ||||||| |||    
T  26608507 tgttatagatagtactataaaatgcaactaaagctctttagtaacatgggctttatctaacaattgttcaaatgttactaaatttaatcagtaacatttt 26608606  T
Q  610 cctttatttagtaacagttttcaattgttac 640  Q
     ||| ||||  ||||| ||||||| ||||||    
T  26608607 tcttgatttcataacaattttcaaatgttac 26608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 518 - 605
Target Start/End: Complemental strand, 16086611 - 16086524
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    ||||||||||||| ||||||||||||| || ||||||| |  |||||||||||||||  |||||||||| ||||||||||||||||||    
T  16086611 ataatactataaaatgttactgaagctattaagtaacatgagctttacctaacaattattcaaatgttattaaatttaattagtaaca 16086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 517 - 640
Target Start/End: Original strand, 4685378 - 4685501
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || |  |||||||| |||| |||||||||||||||| |||| |||| ||||||||||||| ||||| ||| ||| ||    
T  4685378 gatagtactataaaatgtaactaaaacactttagtaatacgggctttacctaacaattgttcaagtgttgctaaatttaattactaacatttttcttgat 4685477  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||||| ||||||    
T  4685478 ttagttacaattttcaagtgttac 4685501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 719 - 813
Target Start/End: Original strand, 30200195 - 30200289
Alignment:
Q  719 aaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||   |||||||||| || ||||| |||||| |||| |||||| ||||    
T  30200195 aaatcacctaagcctagtttccaccatcttttctactataggtgttaccctaactctctaatgttgtcatttctaatcatatcccatctaatctt 30200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 662 - 813
Target Start/End: Complemental strand, 33073059 - 33072906
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||||||||||||| ||||| || || | |||||||| ||| ||||| ||||  ||||||||  |||||| | |||| |||| ||||||||||||||||    
T  33073059 ctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggt 33072960  T
Q  762 gctacctcga--ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||| | |  |||||||||  | |||||||||||| |||||  |||||||||    
T  33072959 gctacccccactctctctaatggtgtcattcctaatcctatcttgtctagtctt 33072906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 546 - 639
Target Start/End: Original strand, 26224982 - 26225075
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtta 639  Q
    ||||||||||| | |||||||||| ||||| |||| ||||||||||||||||||||| || ||| ||| ||||||| ||| ||||||| |||||    
T  26224982 tttagtaacaccggctttacctaataattgttcaagtgttactaaatttaattagtatcatttttcttgatttagttacaattttcaagtgtta 26225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 640
Target Start/End: Original strand, 20277335 - 20277458
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||||||||||| | ||| ||| ||||| |||||||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| | |||  || ||    
T  20277335 gataatactatataatgtaactaaagctctttagtaacaggtgctttacctaacaattgtttaaatgttactaaatttaattaataatattttttttgat 20277434  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| ||||| | ||||||    
T  20277435 ttagttacaattttcgagtgttac 20277458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 546 - 640
Target Start/End: Complemental strand, 10022220 - 10022126
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||  |||||||||||||||| |||  |||||||||| ||||||||||||| |||   | ||||||| ||| ||||||||||||||    
T  10022220 tttagtaacacgagctttacctaacaattgttcatgtgttactaaacttaattagtaacattttttctgatttagttacaattttcaattgttac 10022126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 767
Target Start/End: Complemental strand, 38920846 - 38920796
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  38920846 ccaaaccacttaagcctagtttccaccatcttttctactataggtgctacc 38920796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 767
Target Start/End: Complemental strand, 1740920 - 1740803
Alignment:
Q  650 gattggacaaccctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttt 749  Q
    |||| ||| ||||||||| |||||||| || || ||||||||||| ||   |||||| || ||||| ||||| ||| |||||| |||||||||||| |||    
T  1740920 gatttgactaccctccatctgatctactctccttactacaaaatccacaattctcctatctacatacccaaaccacctaagcctagtttccaccatattt 1740821  T
Q  750 tctactataggtgctacc 767  Q
    |||||| ||| |||||||    
T  1740820 tctactgtagatgctacc 1740803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 661 - 801
Target Start/End: Complemental strand, 38607112 - 38606969
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| |||||||| ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| | |||||||||||||    
T  38607112 cctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacctttctactatagg 38607013  T
Q  761 tgctacctcgactctc---taatattttcattcctaatcttatc 801  Q
    ||||||| | ||||||   |||| || |||||||||||| ||||    
T  38607012 tgctacccccactctctcttaatgttgtcattcctaatcctatc 38606969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 12841449 - 12841565
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  12841449 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 12841548  T
Q  761 tgctacctcgactctct 777  Q
    ||||||||| |||||||    
T  12841549 tgctacctccactctct 12841565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 13859182 - 13859298
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || |||  |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  13859182 cctccatttgatctactcttcttacgacagcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 13859281  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  13859282 tgctacccccactctct 13859298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 808
Target Start/End: Original strand, 27893725 - 27893871
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || |||| |||||||||||| |||||    || |||| | |||| ||| |||||| | |||||||||||| ||||||||||||    
T  27893725 cctccatctgatctactctcctaagtacaaaatctacagatctt---tctacatgttcaaaccacctaagcctattttccaccatctattctactatagg 27893821  T
Q  761 tgctacctcga--ctctctaatattttcattcctaatcttatctcatcta 808  Q
    || |||||| |  |||||||||||| || || |||||| |||| ||||||    
T  27893822 tgttacctcaactctctctaatattgtcgtttctaatcctatcacatcta 27893871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 43281782 - 43281666
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  43281782 cctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 43281683  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  43281682 tgctacccccactctct 43281666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 45836654 - 45836770
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  45836654 cctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 45836753  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  45836754 tgctacccccactctct 45836770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 662 - 777
Target Start/End: Original strand, 19262609 - 19262723
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    |||||| |||||||| ||||| |||||||| ||||| | ||| ||||| ||||   |||| ||| |||||| |||||| |||||||||||||| ||||||    
T  19262609 ctccatctgatctactcttcttactacaaa-tctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggt 19262707  T
Q  762 gctacctcgactctct 777  Q
    |||||| | |||||||    
T  19262708 gctaccccaactctct 19262723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 668 - 766
Target Start/End: Complemental strand, 12966123 - 12966025
Alignment:
Q  668 ttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    ||||||||| || || |||||| ||| ||||| ||| ||||| ||||  ||||| ||| |||||  ||||||||||||||||||| |||||||||||||    
T  12966123 ttgatctactctccttactacagaatttacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 39906544 - 39906650
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || || | ||||| || ||| ||||| ||||  ||||||||  |||||| | |||| |||| |||||||||||||||    
T  39906544 cctccatttgatctactcttcttaccacgacatctatgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactatagg 39906643  T
Q  761 tgctacc 767  Q
    |||||||    
T  39906644 tgctacc 39906650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 42187522 - 42187462
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||| |||||| | |||||||||||||||||| ||||||||||||| |||||||||    
T  42187522 ccaaaccacctaagcctattttccaccatcttttctattataggtgctaccccgactctct 42187462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 813
Target Start/End: Original strand, 48736072 - 48736229
Alignment:
Q  660 ccctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatag 759  Q
    ||||||||||||||||| || ||||||||| |||| || | ||| | ||| ||||   |||| ||| |||| | ||||||  |||||||||||||| |||    
T  48736072 ccctccatttgatctactctcctaactacataatccacaggtcttcgctctacatgagcaaaccacctaagtctagtttctcccatcttttctactgtag 48736171  T
Q  760 gtgctacctcgactctc----taatattttcattcctaatcttatctcatctagtctt 813  Q
    |||||||| | ||||||    |||| |  ||||| ||||| |||||||||||||||||    
T  48736172 gtgctaccccaactctctctataatgtcgtcatttctaattttatctcatctagtctt 48736229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 546 - 621
Target Start/End: Original strand, 26205419 - 26205494
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagt 621  Q
    |||||||||||   ||||||||| |||||  |||| |||||||||||||||||||||||| ||| ||| |||||||    
T  26205419 tttagtaacaccagctttacctaccaatttttcaagtgttactaaatttaattagtaacatttttcttgatttagt 26205494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 625
Target Start/End: Original strand, 26619080 - 26619186
Alignment:
Q  518 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatt 617  Q
    |||||||||| || ||| ||| ||| | ||||||||||  |  |||||||| |||||| |||||||||| |||||||||| ||||||| ||| ||| |||    
T  26619080 ataatactatcaaatgtaactaaagttctttagtaacataggatttaccta-caattgttcaaatgttaataaatttaatcagtaacatttttcttgatt 26619178  T
Q  618 tagtaaca 625  Q
    ||||||||    
T  26619179 tagtaaca 26619186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 656 - 767
Target Start/End: Complemental strand, 40169762 - 40169651
Alignment:
Q  656 acaaccctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctact 755  Q
    |||| |||||||||||||||| || ||    ||||||||||||  |||  |||| ||||  ||||| ||| |||||| | ||||||||||||||||||||    
T  40169762 acaatcctccatttgatctactctccttcacacaaaatctacgtgtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctact 40169663  T
Q  756 ataggtgctacc 767  Q
    ||| ||||||||    
T  40169662 ataagtgctacc 40169651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 727 - 777
Target Start/End: Original strand, 42177255 - 42177305
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| ||||| ||||||||||||||||||||||| |||||| |||||||    
T  42177255 taagcctagttttcaccatcttttctactataggtgatacctcaactctct 42177305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 46356030 - 46356136
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || |||| |||||||  ||| ||||| ||||  ||||| ||  ||| || | |||| |||| |||||||||||||||    
T  46356030 cctccatttgatctactcttcttaccacaacatctacgtgtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactatagg 46356129  T
Q  761 tgctacc 767  Q
    |||||||    
T  46356130 tgctacc 46356136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 777
Target Start/End: Original strand, 2885927 - 2886012
Alignment:
Q  692 atctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||||||||| | |||||||    
T  2885927 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctct 2886012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 605
Target Start/End: Complemental strand, 16170365 - 16170308
Alignment:
Q  548 tagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    ||||||||  || ||||||||||||||| | || ||||||||||||||||||||||||    
T  16170365 tagtaacattgattttacctaacaattgtttaagtgttactaaatttaattagtaaca 16170308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 777
Target Start/End: Original strand, 35906406 - 35906491
Alignment:
Q  692 atctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||||||||||| |||||||    
T  35906406 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctccactctct 35906491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 665 - 777
Target Start/End: Complemental strand, 6374972 - 6374860
Alignment:
Q  665 catttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgct 764  Q
    |||||||||||||||||| || |||  |||||| | ||| ||||| ||||   |||| ||  |||||| | |||| |||| |||||||||||||||||||    
T  6374972 catttgatctacccttcttaccacagcatctactggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgct 6374873  T
Q  765 acctcgactctct 777  Q
    ||| | |||||||    
T  6374872 acccccactctct 6374860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 27021922 - 27021982
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||| |||||| ||||| ||||| |||||||||||||||||||||| | |||||||    
T  27021922 ccaaaccacctaagcctagttttcaccaacttttctactataggtgctaccccaactctct 27021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 29650492 - 29650376
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| ||||  ||||||||||||||    
T  29650492 cctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaatttttctactatagg 29650393  T
Q  761 tgctacctcgactctct 777  Q
    |||| || | |||||||    
T  29650392 tgctgcccccactctct 29650376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 31005331 - 31005215
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  ||| || | |||| |||| |||||||||||||||    
T  31005331 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactatagg 31005232  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  31005231 tgctacccccactctct 31005215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 36514437 - 36514497
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||| |||| | |||||| ||||||||||||||||||||||||||| | |||||||    
T  36514437 ccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctct 36514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 43282460 - 43282400
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||| |||| |||||| ||||||||||  |||||||||||||||||||||| | |||||||    
T  43282460 ccaattcacctaagcctagtttccaccgacttttctactataggtgctaccccaactctct 43282400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 47848726 - 47848666
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| ||| |||||| | ||||||||||||||||||||||||| |||||| | |||||||    
T  47848726 ccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaactctct 47848666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 767
Target Start/End: Original strand, 26742145 - 26742176
Alignment:
Q  736 tttccaccatcttttctactataggtgctacc 767  Q
    ||||||||||||||||||||||||||||||||    
T  26742145 tttccaccatcttttctactataggtgctacc 26742176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 767
Target Start/End: Complemental strand, 28021033 - 28020966
Alignment:
Q  700 atctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||| ||||| ||||  ||||| ||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  28021033 atcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctacc 28020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 813
Target Start/End: Original strand, 40139153 - 40139246
Alignment:
Q  721 atcacttaagccgagtttccaccatcttttctactataggtgctacctcga--ctctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||| |||||| |||||||||||| ||||||||||||||||  ||| |||  ||||||||| || || || ||||||||||| | |||||||||    
T  40139153 atcacctaagcccagtttccaccatattttctactataggtgaaacc-cgactctctctaatgttgtcttttctaatcttatcccgtctagtctt 40139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 767
Target Start/End: Original strand, 31682776 - 31682882
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| |  ||   |||||||| ||| ||||| ||||| ||||| ||  |||||| | |||| |||| ||||||||||||| |    
T  31682776 cctccatttgatctactcttcttatgacggcatctacgggtcttctctctacatacccaaaccatctaagcctattttctaccaacttttctactatatg 31682875  T
Q  761 tgctacc 767  Q
    |||||||    
T  31682876 tgctacc 31682882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 686 - 768
Target Start/End: Original strand, 36101964 - 36102046
Alignment:
Q  686 tacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacct 768  Q
    |||||||||||  | ||| ||||| ||||  ||||| ||| |||||| | |||||| ||||||||||| ||||||||||||||    
T  36101964 tacaaaatctataggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctacct 36102046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 35559167 - 35559284
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactat-ag 759  Q
    |||||||||||||||| ||||| || || | ||||| || ||| ||| | | || |||||||||  |||||| | |||| |||| |||||||||||| ||    
T  35559167 cctccatttgatctactcttcttaccacgacatctaggggtcttctcactaaatgtccaaatcatctaagcctattttctaccaacttttctactataag 35559266  T
Q  760 gtgctacctcgactctct 777  Q
    |||||||| | |||||||    
T  35559267 gtgctacccccactctct 35559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 777
Target Start/End: Complemental strand, 36136797 - 36136756
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||| ||||||||||||||||||||||||||| | |||||||    
T  36136797 tttctaccatcttttctactataggtgctaccccaactctct 36136756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 37618053 - 37617936
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttcc-accatcttttctactatag 759  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | ||| | |||| ||||||||||||||    
T  37618053 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactatag 37617954  T
Q  760 gtgctacctcgactctct 777  Q
    |||||||| | |||||||    
T  37617953 gtgctacccccactctct 37617936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 766
Target Start/End: Complemental strand, 41948568 - 41948519
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    ||||| |||||||||| |||||||||||||||||||| | || |||||||    
T  41948568 ccaaaccacttaagcctagtttccaccatcttttctattgtaagtgctac 41948519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 777
Target Start/End: Complemental strand, 49029353 - 49029268
Alignment:
Q  692 atctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||||||||| | |||||||    
T  49029353 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctct 49029268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 3e-35; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 454 - 638
Target Start/End: Complemental strand, 12190139 - 12189956
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaa 553  Q
    ||||||||||||||  |||||||||| |||||||||||   |||||| ||| || |||||| | |||||||||||||   ||||| || || ||||||||    
T  12190139 tgttactagtaatatcaaaagtgtta-aaaaatataaacgagtaacactttatatatgttactaataatactataaaaaattactaaaactctttagtaa 12190041  T
Q  554 cacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||| ||| ||||||| ||| |||| |||||||    
T  12190040 cacgggctttacctaacaattgttcaaatgttactaaatttaattagtaatatttttcttgatttagttacattttttaattgtt 12189956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 454 - 640
Target Start/End: Complemental strand, 51758942 - 51758755
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    ||||||| || |||||||||||||||||| ||| ||| || || |||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||    
T  51758942 tgttactggtgatacaaaaagtgttacaataatgtaacatttgcaacactttttaattgttacagataatactataaaatgtaactaaaactctttagta 51758843  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    | |||  |||||||||| ||||| || | |||| ||||||||||||| ||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  51758842 atacgagctttacctaataattgttcgagtgttgctaaatttaattactaacatttttcttgatttagttacaattttcaaatgttac 51758755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 524 - 605
Target Start/End: Complemental strand, 3399740 - 3399659
Alignment:
Q  524 ctataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    |||||||||||||| |||||| ||||||||||  || ||||||||||||||| |||||||||||||||||||||||||||||    
T  3399740 ctataaagtgttaccgaagctatttagtaacatagattttacctaacaattgttcaaatgttactaaatttaattagtaaca 3399659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 502 - 632
Target Start/End: Original strand, 39368599 - 39368730
Alignment:
Q  502 tttttaaatgttattgataatactataaag-tgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattag 600  Q
    ||||||||||||| |||||||||||||||  ||| ||||||||| ||||||| || |  |||| |||||||||||   |||||| ||||| |||||||||    
T  39368599 tttttaaatgttactgataatactataaaaatgtaactgaagctctttagtagcatgtgctttgcctaacaattgtataaatgtgactaattttaattag 39368698  T
Q  601 taacaatttcctttatttagtaacagttttca 632  Q
    ||||| ||| ||| ||||||||||| ||||||    
T  39368699 taacatttttcttgatttagtaacatttttca 39368730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 546 - 640
Target Start/End: Complemental strand, 16222874 - 16222780
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||||||||||| |||||||||||||||  |||| ||||||||||||| |||||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  16222874 tttagtaacacgggctttacctaacaattattcaagtgttactaaattttattagtaacatttttcttgatttagttacaattttcaaatgttac 16222780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 28637028 - 28636905
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || || ||||| ||||  |||||||||||||||||  ||||||||||||||||| ||||||||||| ||| ||| ||    
T  28637028 gatattactataaaatgtaactaaatctctttagcaacagtgactttacctaacaattattcaaatgttactaaattgaattagtaacatttttcttgat 28636929  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| |||| || ||||||    
T  28636928 ttagttacaatttttaaatgttac 28636905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 633
Target Start/End: Complemental strand, 897555 - 897464
Alignment:
Q  541 agctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaa 633  Q
    |||| |||||||||| | |||| |||||||||||| |||| ||||||||||||||||||| |||| ||| ||| ||||||||||| |||||||    
T  897555 agctctttagtaacatgaactt-acctaacaattgttcaattgttactaaatttaattaggaacatttttcttcatttagtaacaattttcaa 897464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 4001629 - 4001745
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||||||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  4001629 cctccatttgatctactcttcttacaacggcatctacgggtctcctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 4001728  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  4001729 tgctacccccactctct 4001745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 15086042 - 15085926
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| |||||||| ||   |||||||| ||| ||||| |||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  15086042 cctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg 15085943  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  15085942 tgctacccccactctct 15085926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 766
Target Start/End: Complemental strand, 40416471 - 40416374
Alignment:
Q  669 tgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    |||||||| || || |||||||||||||| | ||| ||||| ||||  | ||| ||| ||||||  ||||||||||||||||||||||||||||||||    
T  40416471 tgatctactctccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctac 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 560 - 640
Target Start/End: Original strand, 5911682 - 5911762
Alignment:
Q  560 ctttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||| ||| ||| ||||||| | | ||||||| ||||||    
T  5911682 ctttacctaacaattgttcaagtgttactaaatttaatcagtaacatttttcttgatttagttaaaattttcaagtgttac 5911762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 8672026 - 8671910
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||||||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  8672026 cctccatttgatctactcttcttaccacggcatctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 8671927  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  8671926 tgctacccccactctct 8671910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 32082919 - 32083035
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| |||||||||  ||| |||||| ||  |||||| | |||| |||| |||||||||||||||    
T  32082919 cctccatttgatctactcttcttacaacggcatctacgggtctcctctctgcatgtccaaaccatctaagcctattttctaccaacttttctactatagg 32083018  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  32083019 tgctacccccactctct 32083035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 669 - 777
Target Start/End: Complemental strand, 51812625 - 51812517
Alignment:
Q  669 tgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacct 768  Q
    ||||||||  |||| ||||||||||||||   | | ||||| ||||  ||||||||| |||||| |||||||||||||||||||||||||| || ||||     
T  51812625 tgatctacttttcttactacaaaatctacaatttttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgttaccc 51812526  T
Q  769 cgactctct 777  Q
    | |||||||    
T  51812525 caactctct 51812517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 633
Target Start/End: Complemental strand, 13208708 - 13208621
Alignment:
Q  546 tttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaa 633  Q
    |||||||||||||  ||||||||||||| | |||| || ||||||||||||||||||||| ||| ||| ||||| | ||| |||||||    
T  13208708 tttagtaacacgggttttacctaacaatggttcaagtggtactaaatttaattagtaacatttttcttaatttaattacaattttcaa 13208621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 640
Target Start/End: Complemental strand, 15214415 - 15214329
Alignment:
Q  554 cacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||| |||||||| |||||||| |||||| |||||||||||||||||||| | ||| ||| |||||||  || ||||||| ||||||    
T  15214415 cacgaactttacccaacaattgttcaaatattactaaatttaattagtaaaatttttcttgatttagttgcaattttcaagtgttac 15214329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 640
Target Start/End: Complemental strand, 18308327 - 18308150
Alignment:
Q  465 atacaaaaagtgttacaaaaatataaa--tatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactt 562  Q
    |||||||||||||||||| ||| |||   | ||| ||| ||||| |||||||   | ||||||||||| ||| ||| ||||  || |||||||| | |||    
T  18308327 atacaaaaagtgttacaataatgtaacattttgtgacactttttgaatgttacaaacaatactataaaatgtaactaaagcccttcagtaacacaggctt 18308228  T
Q  563 tacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||   |||||||| ||| | ||||  |||||| ||| ||| ||||||||||| ||||||| ||||||    
T  18308227 tacctaacaattgtagaaatgttaataattgtaatctgtaacatttttcttgatttagtaacaattttcaaatgttac 18308150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 767
Target Start/End: Complemental strand, 51602164 - 51602058
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || || | |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  51602164 cctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 51602065  T
Q  761 tgctacc 767  Q
    |||||||    
T  51602064 tgctacc 51602058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 777
Target Start/End: Complemental strand, 43423804 - 43423711
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||| |||||||   ||| ||||| ||||  ||||| ||| |||||| ||||||||||||||||||||||||||||| |||| | |||||||    
T  43423804 actacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttaccccaactctct 43423711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 1210853 - 1210737
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  1210853 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 1210754  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  1210753 tgctacccccactctct 1210737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 2544707 - 2544591
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| || || |||| | ||||||  | ||| ||||| |||| |||||| ||| |||| |   |||||||||||||||||||||||||    
T  2544707 cctccatctgatctactctccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactatagg 2544608  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  2544607 tgctaccccaactctct 2544591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 3819086 - 3819146
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    ||||| |||||||| | |||| |||||||||||||||| |||||||||||||| |||||||    
T  3819086 ccaaaccacttaagtctagttaccaccatcttttctaccataggtgctacctcaactctct 3819146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 766
Target Start/End: Original strand, 14226004 - 14226108
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    |||||| |||||||| || || |||||||||||||| |   ||||||| ||||  ||||| ||| |||||| | ||||||||||||||||||  ||||||    
T  14226004 ctccatgtgatctactctccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggt 14226103  T
Q  762 gctac 766  Q
    |||||    
T  14226104 gctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 767
Target Start/End: Original strand, 32404730 - 32404806
Alignment:
Q  691 aatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||||| | ||| ||||| ||||||||||| ||| |||||| | ||||||||||||||| ||||||||||| ||||    
T  32404730 aatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttacc 32404806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 777
Target Start/End: Original strand, 34792523 - 34792639
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  34792523 cctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactatagg 34792622  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  34792623 tgctacccccactctct 34792639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 733 - 812
Target Start/End: Original strand, 4590774 - 4590853
Alignment:
Q  733 gagtttccaccatcttttctactataggtgctacctcgactctctaatattttcattcctaatcttatctcatctagtct 812  Q
    |||||||||||||||||||||  || | ||||||| | ||||||||||||| ||||| |||||| |||||  ||||||||    
T  4590774 gagtttccaccatcttttctataatggatgctaccccaactctctaatattgtcatttctaatcctatcttgtctagtct 4590853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 684 - 767
Target Start/End: Original strand, 48431603 - 48431686
Alignment:
Q  684 actacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    ||||||||||||||   ||| ||||| ||||  ||||| ||| |||||| | ||||||||||||||||||||||||| ||||||    
T  48431603 actacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctacc 48431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 640
Target Start/End: Complemental strand, 17113107 - 17112927
Alignment:
Q  464 aatacaaaaagtgttacaaaa--atataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagcttttta--gtaacacgga 559  Q
    ||||||| || ||||||||||  ||| ||||| |||||| ||||| ||||||| |||| ||||  |||| | ||| |  |||| ||||  |||||| |      
T  17113107 aatacaacaattgttacaaaagaatagaaataagtaacatttttttaatgttactgatgatacagtaaaatattattacagctctttatagtaacatgag 17113008  T
Q  560 ctttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    ||||| |||||||||| |||| |||||| |||||||| |||||  | ||| ||| ||||||||||| ||||||||| ||||    
T  17113007 ctttaactaacaattgttcaagtgttacaaaatttaactagtactatttttcttgatttagtaacaattttcaattattac 17112927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 736 - 777
Target Start/End: Complemental strand, 1661463 - 1661422
Alignment:
Q  736 tttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  1661463 tttccaccatcttttctactataggtgctaccccaactctct 1661422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 766
Target Start/End: Complemental strand, 5338776 - 5338727
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    ||||| ||| |||||  |||||||||||||||||||||||||||||||||    
T  5338776 ccaaaccacctaagctcagtttccaccatcttttctactataggtgctac 5338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 661 - 813
Target Start/End: Original strand, 35828724 - 35828880
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||| | || || |||||| ||||||  | ||| ||||| |||  |||||| ||| ||| || | ||||||||||||||||||| |||||    
T  35828724 cctccatatgatcttctctccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccatagg 35828823  T
Q  761 tgctac-----ctcgactctctaatattttcattcctaatcttatctcatctagtctt 813  Q
    ||||||     |||  |||||||||||| ||||| ||||||||||| || ||||||||    
T  35828824 tgctactcaaactc-tctctctaatattgtcatttctaatcttatcacacctagtctt 35828880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 766
Target Start/End: Complemental strand, 38868934 - 38868885
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctac 766  Q
    ||||| ||| |||||||||||||||||||||||||||  |||||||||||    
T  38868934 ccaaaccacctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 696377 - 696261
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| |||||||| ||||| || ||   |||||||| ||| ||||| |||| |||||  ||  |||||| | |||| |||| |||||||||||||||    
T  696377 cctccatatgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaagccatctaagcctattttctaccaacttttctactatagg 696278  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  696277 tgctacccccactctct 696261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 561 - 605
Target Start/End: Complemental strand, 1844033 - 1843989
Alignment:
Q  561 tttacctaacaattggtcaaatgttactaaatttaattagtaaca 605  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||    
T  1844033 tttacctaacaattgttcaaatgttactaaattcaatcagtaaca 1843989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 705 - 761
Target Start/End: Complemental strand, 7921899 - 7921843
Alignment:
Q  705 ctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||| |||| |||||| ||| ||| || ||||||||||||||||||||||||||||    
T  7921899 ctctctacatgtccaaaccacataaacctagtttccaccatcttttctactataggt 7921843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 665 - 777
Target Start/End: Complemental strand, 8391876 - 8391764
Alignment:
Q  665 catttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgct 764  Q
    |||||||||||| ||||| || ||   |||||||| ||||||||| |||| ||||||  |  ||| || | |||| |||| |||||||||||||||||||    
T  8391876 catttgatctactcttcttacaacggcatctacgggtctcctctctacatgtccaaacaatctaaacctattttctaccaacttttctactataggtgct 8391777  T
Q  765 acctcgactctct 777  Q
    ||| | |||||||    
T  8391776 acccccactctct 8391764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 663 - 767
Target Start/End: Original strand, 13827746 - 13827850
Alignment:
Q  663 tccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtg 762  Q
    ||||| |||||||| || || |||||| |||||||   ||| ||||| |||| |||||| ||| | | || |||||||||| |||||||||||||||||     
T  13827746 tccatatgatctactctccttactacagaatctacacttcttctctctacatgtccaaaccaccttaccctagtttccaccgtcttttctactataggta 13827845  T
Q  763 ctacc 767  Q
    |||||    
T  13827846 ctacc 13827850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 561 - 621
Target Start/End: Complemental strand, 15204675 - 15204615
Alignment:
Q  561 tttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagt 621  Q
    ||||||||||||||| |||| |||||||||||||| |||| |||| ||| ||| |||||||    
T  15204675 tttacctaacaattgttcaagtgttactaaatttagttagcaacatttttcttgatttagt 15204615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 764
Target Start/End: Original strand, 13827935 - 13827994
Alignment:
Q  705 ctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgct 764  Q
    ||||| |||| | |||| ||| ||| || |||||||||||||||||||||||||||||||    
T  13827935 ctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgct 13827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 777
Target Start/End: Complemental strand, 16943210 - 16943167
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacctcgactctct 777  Q
    |||||||||||||||||||||||||||| ||||| | |||||||    
T  16943210 agtttccaccatcttttctactataggtactaccccaactctct 16943167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 640
Target Start/End: Original strand, 37097375 - 37097438
Alignment:
Q  577 tcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgttac 640  Q
    |||||||||||||||||| || ||||||| ||| ||| ||||||| ||| ||||||| ||||||    
T  37097375 tcaaatgttactaaattttatcagtaacatttttcttgatttagttacaattttcaagtgttac 37097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 429
Target Start/End: Original strand, 39367970 - 39368025
Alignment:
Q  375 gattcacaattttt-attctagacaactttgcgacagttttttacaacttctcaaa 429  Q
    |||||||||||||| | ||| ||||| ||||||||| |||||||||||||||||||    
T  39367970 gattcacaattttttagtctggacaattttgcgacacttttttacaacttctcaaa 39368025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 663 - 777
Target Start/End: Original strand, 30202306 - 30202420
Alignment:
Q  663 tccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtg 762  Q
    |||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| | |||||||||||||||    
T  30202306 tccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtg 30202405  T
Q  763 ctacctcgactctct 777  Q
    ||||| | |||||||    
T  30202406 ctacccccactctct 30202420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 705 - 778
Target Start/End: Original strand, 52073680 - 52073754
Alignment:
Q  705 ctctccacatatccaaatcacttaagccgagtttcc-accatcttttctactataggtgctacctcgactctcta 778  Q
    ||||| |||| |||||| ||| ||||||||||||   |||||||||||||| |||||||||||| | ||||||||    
T  52073680 ctctctacatgtccaaaccacctaagccgagttttttaccatcttttctacaataggtgctaccccaactctcta 52073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 767
Target Start/End: Complemental strand, 4380048 - 4380015
Alignment:
Q  734 agtttccaccatcttttctactataggtgctacc 767  Q
    |||||||||||||||||||||||||| |||||||    
T  4380048 agtttccaccatcttttctactatagttgctacc 4380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 780
Target Start/End: Original strand, 8343098 - 8343151
Alignment:
Q  727 taagccgagtttccaccatcttttctactataggtgctacctcgactctctaat 780  Q
    |||||| ||||||||||||||||||||||| ||||| |||| | || |||||||    
T  8343098 taagcctagtttccaccatcttttctactaaaggtgttaccccaacactctaat 8343151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 767
Target Start/End: Original strand, 17267927 - 17267976
Alignment:
Q  718 caaatcacttaagccgagtttccaccatcttttctactataggtgctacc 767  Q
    |||| ||| |||||| ||||||||| |||||||||||||||| |||||||    
T  17267927 caaaccacctaagccaagtttccacaatcttttctactatagatgctacc 17267976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 766
Target Start/End: Original strand, 36339977 - 36340082
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    ||||||| ||||| ||||  || |||||||||||||  | ||| |||||  ||| || ||| ||| ||| || | |||||||||||||||||| ||||||    
T  36339977 cctccatctgatcaacccgccttactacaaaatctataggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatatagg 36340076  T
Q  761 tgctac 766  Q
    ||||||    
T  36340077 tgctac 36340082  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 753
Target Start/End: Complemental strand, 37591069 - 37591028
Alignment:
Q  712 catatccaaatcacttaagccgagtttccaccatcttttcta 753  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  37591069 catatccaaaccacttaggtcgagtttccaccatcttttcta 37591028  T

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Target: scaffold0684 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 658 - 843
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||| ||| ||| ||| || ||  ||| ||||||| |||||| |||||||||||||| ||| ||| || || |||||||    
T  658 tgttactagtgatacaaaaagtgttccaataatgtaacatttgcgacactttttaattgttatagataatactataaaatgtaactaaaactctttagta 757  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaattgtt 638  Q
    ||| |||||||| |||||||||| || | |||| | ||||||||||||||||||||| ||| ||||||| ||| ||||||| ||||    
T  758 acatggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacaattttcttgatttagttacaattttcaagtgtt 843  T

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Target: scaffold0002 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 469 - 609
Target Start/End: Original strand, 446211 - 446350
Alignment:
Q  469 aaaaagtgttacaaaaatataaatatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagtaacacggactttaccta 568  Q
    |||||||||||||||| || ||||| |||||| ||||| ||||||| |  || ||||||||||||||||| ||||| |||||||| | ||||||| ||||    
T  446211 aaaaagtgttacaaaa-tacaaataggtaacatttttttaatgttactactactactataaagtgttactaaagctctttagtaatatggacttttccta 446309  T
Q  569 acaattggtcaaatgttactaaatttaattagtaacaattt 609  Q
    ||||||| ||||||||||| |||||||||| ||||||||||    
T  446310 acaattgttcaaatgttaccaaatttaattggtaacaattt 446350  T

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Target: scaffold0069 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 454 - 633
Target Start/End: Original strand, 40609 - 40789
Alignment:
Q  454 tgttactagtaatacaaaaagtgttacaaaaatataa-atatgtaacagtttttaaatgttattgataatactataaagtgttactgaagctttttagta 552  Q
    |||||||||| |||||||||||||||| | ||| ||| || ||  ||| ||||||| |||||  |||||||||||||| ||| ||| || || |||||||    
T  40609 tgttactagtgatacaaaaagtgttacgataatgtaacatttgagacactttttaattgttacagataatactataaaatgtaactaaaactctttagta 40708  T
Q  553 acacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttcaa 633  Q
    ||| |||||||| |||||||||| || | |||| | ||||||||||||||||||||| ||| ||||||| ||| |||||||    
T  40709 acatggactttatctaacaattgttcgagtgttgcaaaatttaattagtaacaattttcttgatttagttacaattttcaa 40789  T

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Target: scaffold0576 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 640
Target Start/End: Complemental strand, 6824 - 6701
Alignment:
Q  517 gataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttat 616  Q
    |||| ||||||||| ||| ||| || | |||||||||||| | |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||| ||    
T  6824 gatagtactataaaatgtaactaaaacattttagtaacaccggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgat 6725  T
Q  617 ttagtaacagttttcaattgttac 640  Q
    ||||| ||| |||| || ||||||    
T  6724 ttagttacaatttttaagtgttac 6701  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 82829 - 82713
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||| ||||||||| || ||   ||||| |||||| ||||| | || |||||||||  |||||| | |||| |||| |||||||||||||||    
T  82829 cctccatttgatatacccttcttacgactgcatctatggatcttctctctatatgtccaaatcatctaagcccattttctaccaacttttctactatagg 82730  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  82729 tgctacccccactctct 82713  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 783
Target Start/End: Original strand, 44098 - 44164
Alignment:
Q  717 ccaaatcacttaagccgagtttccaccatcttttctactataggtgctacctcgactctctaatatt 783  Q
    ||||| ||| |||||| | ||||| |||||||||||||||||||||||||| | |||||||||||||    
T  44098 ccaaaccacctaagcctattttccgccatcttttctactataggtgctaccccaactctctaatatt 44164  T

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Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 777
Target Start/End: Complemental strand, 31576 - 31460
Alignment:
Q  661 cctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactatagg 760  Q
    |||||||||||||||| ||||| || |    |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| |||||||||||||||    
T  31576 cctccatttgatctactcttcttaccatggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 31477  T
Q  761 tgctacctcgactctct 777  Q
    ||||||| | |||||||    
T  31476 tgctacccccactctct 31460  T

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Target: scaffold0570 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 767
Target Start/End: Original strand, 1123 - 1228
Alignment:
Q  662 ctccatttgatctacccttctaactacaaaatctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggt 761  Q
    ||||||||||||||| ||||| || ||   |||||||| ||| ||||| ||||  ||||| ||  |||||| | |||| |||| ||||||||||||||||    
T  1123 ctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggt 1222  T
Q  762 gctacc 767  Q
    ||||||    
T  1223 gctacc 1228  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 532 - 640
Target Start/End: Complemental strand, 8853 - 8747
Alignment:
Q  532 tgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaatttcctttatttagtaacagttttc 631  Q
    ||||||||||||| |||||||||| ||  ||| || || ||||||| ||||||||||| ||| | |||||||| ||||  |||||||||| ||| |||||    
T  8853 tgttactgaagctatttagtaaca-ggggtttgccaaataattggttaaatgttactatattcatttagtaac-attttgtttatttagttacatttttc 8756  T
Q  632 aattgttac 640  Q
    || ||||||    
T  8755 aactgttac 8747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 694 - 765
Target Start/End: Complemental strand, 11873 - 11802
Alignment:
Q  694 ctacggatctcctctccacatatccaaatcacttaagccgagtttccaccatcttttctactataggtgcta 765  Q
    |||| ||||| ||||| ||||  ||||| ||| ||||||||||| | |||||||||||||| ||||||||||    
T  11873 ctacagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgcta 11802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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