View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4919-Insertion-5 (Length: 274)
Name: NF4919-Insertion-5
Description: NF4919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4919-Insertion-5 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 4575277 - 4575011
Alignment:
| Q |
7 |
acatatgacttgctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
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|
| T |
4575277 |
acatatgacttgctattgatttttgcaattatgacatgcagatgagagtgatctaacaaatgaatatttggacacaaaaattgactggatcccaggtttg |
4575178 |
T |
|
| Q |
107 |
aaaaacttcagattgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcata |
206 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4575177 |
aaaaacttcagattgaaggatcttcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaatactgaagtggcagataaatgtcata |
4575078 |
T |
|
| Q |
207 |
gagcttctggtatgctattcaatacttcgaatgaacttgaaagtgatgttatgaatgctttctattc |
273 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4575077 |
gagcttctggtatggtattcaatacttctaatgaacttgagagtgatgttatgaatgctttctattc |
4575011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 4561462 - 4561207
Alignment:
| Q |
18 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcag |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
4561462 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaatgaatatctggacacgaaagttgactggatcccaggtttgaaaaacttcag |
4561363 |
T |
|
| Q |
118 |
attgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggt |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4561362 |
attgaaggatcttcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcttagagcttctggt |
4561263 |
T |
|
| Q |
218 |
atgctattcaatacttcgaatgaacttgaaagtgatgttatgaatgctttctattc |
273 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4561262 |
atggtattcaatacttctaatgaacttgagagtgatgttatgaatgctttctattc |
4561207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 263
Target Start/End: Complemental strand, 4470761 - 4470516
Alignment:
| Q |
18 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcag |
117 |
Q |
| |
|
|||||||| |||| ||||||||| |||||||||||||| |||||| | | | |||||| |||| | |||||||||| |||||||||||||||||||| |
|
|
| T |
4470761 |
gctattgactttttcaattatgatatgcagatgagagttatctaatagatggatatttcgacattgaagttgactggattccaggtttgaaaaacttcag |
4470662 |
T |
|
| Q |
118 |
attgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggt |
217 |
Q |
| |
|
|||||||||| |||| |||||||| |||| ||||||||||||| | | ||| || || | ||||||| || |||||||||| |||||||||| | |
|
|
| T |
4470661 |
attgaaggattttcctgaaacaataaagataaaagatcctaatgactttatgttaaaatatacaaatgaagtgacaaataaatgtcaaagagcttctgct |
4470562 |
T |
|
| Q |
218 |
atgctattcaatacttcgaatgaacttgaaagtgatgttatgaatg |
263 |
Q |
| |
|
|| | || |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4470561 |
attgttttgaatacttctaatgaacttgaaagtgatgttatgaatg |
4470516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 262
Target Start/End: Complemental strand, 3172684 - 3172455
Alignment:
| Q |
33 |
aattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcagattgaaggatcgtcc |
132 |
Q |
| |
|
|||||||| |||||||||||||| || |||||| | |||||||||||| | |||||||||| ||||||||||||||||| ||||||||| ||| ||| |
|
|
| T |
3172684 |
aattatgatatgcagatgagagttatgaaacaaatggatatttggacactatagttgactggattccaggtttgaaaaactttagattgaagcatcttcc |
3172585 |
T |
|
| Q |
133 |
taggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggtatgctattcaatact |
232 |
Q |
| |
|
|| ||||| | || |||| |||||||||| |||| |||| ||||| | |||||| | |||||||||||| | |||||||| ||| | ||||| ||| |
|
|
| T |
3172584 |
tactttaattaggataaaagatcctaatgatttgatgatagaatttatgattgaagtaggagataaatgtcacaaagcttctgctattgttttcaacact |
3172485 |
T |
|
| Q |
233 |
tcgaatgaacttgaaagtgatgttatgaat |
262 |
Q |
| |
|
|| ||||||||||| ||||||||||||||| |
|
|
| T |
3172484 |
tctaatgaacttgagagtgatgttatgaat |
3172455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 263
Target Start/End: Complemental strand, 4462081 - 4461836
Alignment:
| Q |
18 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcag |
117 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||| | |||||||| | | |||||| ||||| | |||||||||| |||||||||||||| ||||| |
|
|
| T |
4462081 |
gctattgacttttttaattatgatatgcagatgagatttatctaacagatggatatttagacactgaagttgactggattccaggtttgaaaaatttcag |
4461982 |
T |
|
| Q |
118 |
attgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggt |
217 |
Q |
| |
|
|||||||||| |||| |||||||| |||| |||||||| ||||| ||||| |||| || |||| || ||||||||||||| |||||||||| | |
|
|
| T |
4461981 |
attgaaggattttcctgaaacaataaagataaaagatcctaataacttgctgataaaatttgtcagtgaaatgacagataaatgtcacagagcttctgct |
4461882 |
T |
|
| Q |
218 |
atgctattcaatacttcgaatgaacttgaaagtgatgttatgaatg |
263 |
Q |
| |
|
| | || |||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
4461881 |
gttattttgaatacttctaatgaactcgaaagtgatattatgaatg |
4461836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 4481651 - 4481396
Alignment:
| Q |
18 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcag |
117 |
Q |
| |
|
|||||||| ||||| ||| ||| |||||||||||||| || ||||| | | |||||||||| ||| | |||||||| ||||||||||||||||| || |
|
|
| T |
4481651 |
gctattgaattttgtgattgtgatatgcagatgagagttatttaacagatggatatttggacgcaacagtagactggattccaggtttgaaaaactttag |
4481552 |
T |
|
| Q |
118 |
attgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggt |
217 |
Q |
| |
|
||||||||| | |||| ||||| ||| || | |||||||| |||||| |||| || ||| | ||||||| ||||||||||||| ||||| |||| | |
|
|
| T |
4481551 |
attgaaggaccttcctgatttaattaaggtaacagatcctaatcacttgatcataaaatataaaaatgaagtgacagataaatgtcaaagagcatctgct |
4481452 |
T |
|
| Q |
218 |
atgctattcaatacttcgaatgaacttgaaagtgatgttatgaatgctttctattc |
273 |
Q |
| |
|
| | |||||||||| |||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
4481451 |
tttgttatcaatacttcttatgaacttgagagtgatgttatgaattctctctattc |
4481396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 265
Target Start/End: Complemental strand, 4506806 - 4506568
Alignment:
| Q |
27 |
ttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcagattgaagga |
126 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||||| | |||||||||||| ||| | |||||||| |||||||||| |||||| ||| |||| || |
|
|
| T |
4506806 |
ttttgtaattatgatatgcagatgagagttatctaacaaatggatatttggacactaaggtagactggattccaggtttgagaaactttagactgaaaga |
4506707 |
T |
|
| Q |
127 |
tcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggtatgctattc |
226 |
Q |
| |
|
|| |||| || |||| ||||| | ||||||| || |||| |||| ||||| | ||||| ||||| | || ||||||||| ||| ||| | || |
|
|
| T |
4506706 |
tcttcctgattttataaggacaacagatcctaacgatttgaggatagaatttattattgaagcagcagaaacatttcatagagcctcttctattgttctc |
4506607 |
T |
|
| Q |
227 |
aatacttcgaatgaacttgaaagtgatgttatgaatgct |
265 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||| |||||||| |
|
|
| T |
4506606 |
aatacttctaatgaacttgagagtaatgttctgaatgct |
4506568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 265
Target Start/End: Original strand, 4514294 - 4514542
Alignment:
| Q |
17 |
tgctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttca |
116 |
Q |
| |
|
||||||| | |||||||||||||| |||||||||||||| || | ||||| | |||||||||||| || |||||||||| ||||||||| |||||| | |
|
|
| T |
4514294 |
tgctatttacttttgcaattatgatatgcagatgagagttatttgacaaatggatatttggacactaaagttgactggattccaggtttgcgaaacttta |
4514393 |
T |
|
| Q |
117 |
gattgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctgg |
216 |
Q |
| |
|
|| ||||||| | |||| || ||| ||||| | || ||||||| |||| | || ||||| | |||| ||| ||||| | |||||||||||||| |
|
|
| T |
4514394 |
gactgaaggaccttcctgattttatacggacaacagatgctaatgatttgatgttagaatttatctttgaaatggtagatagacttcatagagcttctgc |
4514493 |
T |
|
| Q |
217 |
tatgctattcaatacttcgaatgaacttgaaagtgatgttatgaatgct |
265 |
Q |
| |
|
||| | || |||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
4514494 |
tatttttttaaatacttctaatgatcttgagagtgatgttatgaatgct |
4514542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 262
Target Start/End: Complemental strand, 4458547 - 4458309
Alignment:
| Q |
27 |
ttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagat---tgactggatcccaggtttgaaaaacttcagattgaa |
123 |
Q |
| |
|
||||||||||| | ||||||| |||||| || ||||||| | ||||||||||| ||| | ||||||||| |||||||| ||||||| || ||||| |
|
|
| T |
4458547 |
ttttgcaattacaatatgcagaagagagttatttaacaaatggatatttggacaaaaaagtcggtgactggatttcaggtttgcaaaactttaggttgaa |
4458448 |
T |
|
| Q |
124 |
ggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggtatgcta |
223 |
Q |
| |
|
||| | |||| || ||||||| | | |||||||| | |||| ||||| ||||| || ||||||||||||| |||||||||||| ||| ||| | |
|
|
| T |
4458447 |
ggaccttcctgattttataaagattacagatcctaataatttgatgataaaatttataaccgaagtggcagatagatgtcatagagcctcttctattgtt |
4458348 |
T |
|
| Q |
224 |
ttcaatacttcgaatgaacttgaaagtgatgttatgaat |
262 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
4458347 |
atcaatacttcttatgaacttgagagtgatgttatgaat |
4458309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 4489535 - 4489644
Alignment:
| Q |
18 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcag |
117 |
Q |
| |
|
|||||||| ||||| |||| ||| |||||||||||||| |||||||| | | | |||||||||| || |||| ||||| ||||||||||||| | | || |
|
|
| T |
4489535 |
gctattgacttttgaaattgtgatatgcagatgagagtaatctaacagatggaaatttggacactaaagttgaatggattccaggtttgaaaagcattag |
4489634 |
T |
|
| Q |
118 |
attgaaggat |
127 |
Q |
| |
|
||||||||| |
|
|
| T |
4489635 |
tttgaaggat |
4489644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 4503725 - 4503806
Alignment:
| Q |
184 |
tgaagtggcagataaatgtcatagagcttctggtatgctattcaatacttcgaatgaacttgaaagtgatgttatgaatgct |
265 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || | ||||||||||| ||||||||||| ||||||| |||||||||| |
|
|
| T |
4503725 |
tgaagtggcagataaatgtcaaagagcctcagccattgttttcaatacttctaatgaacttgagagtgatgctatgaatgct |
4503806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 270
Target Start/End: Original strand, 4266346 - 4266592
Alignment:
| Q |
27 |
ttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacac-aaagat--tgactggatcccaggtttgaaaaacttcagattgaa |
123 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||||||| | |||||| || | |||| | ||||||||| | ||||||| ||||||| || ||||| |
|
|
| T |
4266346 |
ttttgcaattgcgatatgcagatgagagttatctaacaaatggatatttagataataaagttggtgactggattcaaggtttgcaaaactttaggttgaa |
4266445 |
T |
|
| Q |
124 |
ggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggtatgcta |
223 |
Q |
| |
|
||| | |||| || | || || | | |||||||||| |||| ||||| ||||| || |||||||| |||| |||||| |||| ||| ||| | |
|
|
| T |
4266446 |
ggaccttcctgattttacaaggattacagatcctaatgatttgatgataaaatttattaccgaagtggcggatagatgtcaccgagcctcttctattgtt |
4266545 |
T |
|
| Q |
224 |
ttcaatacttcgaatgaacttgaaagtgatgttatgaatgctttcta |
270 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||| |||| |
|
|
| T |
4266546 |
atcaatacttcatatgaacttgagagtgatgttatgaatgctctcta |
4266592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 4517263 - 4517191
Alignment:
| Q |
34 |
attatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttg |
106 |
Q |
| |
|
||||||| |||||||||||||| || | ||||| | |||||||||||| || |||||||||| ||||||||| |
|
|
| T |
4517263 |
attatgatatgcagatgagagttatttgacaaatggatatttggacactaaagttgactggattccaggtttg |
4517191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 4593168 - 4593096
Alignment:
| Q |
42 |
atgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaactt |
114 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||||| || || | || ||||| ||||||||||||||||| |
|
|
| T |
4593168 |
atgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactt |
4593096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 4602733 - 4602654
Alignment:
| Q |
35 |
ttatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaactt |
114 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||| | || |||||| ||||| | || ||||| ||||||||||||||||| |
|
|
| T |
4602733 |
ttatgatatgcagatgatagttatctaacaaatggatgtttggaaacaaaagtagattggattccaggtttgaaaaactt |
4602654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 1282050 - 1281966
Alignment:
| Q |
43 |
tgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcagattgaaggat |
127 |
Q |
| |
|
||||||||||||| |||||||||| | ||||||||| ||||| | || ||||| |||||||||||||| ||| | ||||||||| |
|
|
| T |
1282050 |
tgcagatgagagttatctaacaaatggatatttggaaacaaaagtagattggattccaggtttgaaaaatttccggttgaaggat |
1281966 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 20863017 - 20863272
Alignment:
| Q |
18 |
gctattgatttttgcaattatgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcag |
117 |
Q |
| |
|
|||| ||| ||||| | |||||| || ||||||||||| |||||||||| | ||||||||| || || |||| |||| ||||||||| ||| ||||| |
|
|
| T |
20863017 |
gctactgacttttggagttatgatatacagatgagagttatctaacaaatggatatttggagactaaagttgatcggattccaggtttgcgaaatttcag |
20863116 |
T |
|
| Q |
118 |
attgaaggatcgtcctaggttaataaagacaaaaaatcctaatgacttgacgataagatttaacactgaagtggcagataaatgtcatagagcttctggt |
217 |
Q |
| |
|
| ||||||| || || | |||| ||||| |||||||||||| | | |||| |||| || |||||| | ||||| || ||| ||||| |||| | |
|
|
| T |
20863117 |
actgaaggactttcttacttgcataaggacaacaaatcctaatgattcgttgatagaatttctcattgaagtagtagatagatttcacagagcctctgct |
20863216 |
T |
|
| Q |
218 |
atgctattcaatacttcgaatgaacttgaaagtgatgttatgaatgctttctattc |
273 |
Q |
| |
|
|| | |||||||||| ||||| ||||| |||||||||||||||| | ||||||| |
|
|
| T |
20863217 |
attgttttcaatactttcaatgagcttgagagtgatgttatgaatgttctctattc |
20863272 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 1675169 - 1675079
Alignment:
| Q |
37 |
atgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcagattgaaggat |
127 |
Q |
| |
|
|||| ||||||||||||| |||||||||| | ||||||||| ||||| | || ||||| ||||||||||||||||| | ||||||||| |
|
|
| T |
1675169 |
atgatatgcagatgagagacatctaacaaatggatatttggaaacaaaagtcgagtggattccaggtttgaaaaactttcggttgaaggat |
1675079 |
T |
|
Back To:
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Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 406 - 316
Alignment:
| Q |
37 |
atgacatgcagatgagagtgatctaacaaaagaatatttggacacaaagattgactggatcccaggtttgaaaaacttcagattgaaggat |
127 |
Q |
| |
|
|||| ||||||||||||| |||||||||| | ||||||||| ||||| | || ||||| ||||||||||||||||| | ||||||||| |
|
|
| T |
406 |
atgatatgcagatgagagacatctaacaaatggatatttggaaacaaaagtcgagtggattccaggtttgaaaaactttcggttgaaggat |
316 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 24103750 - 24103705
Alignment:
| Q |
225 |
tcaatacttcgaatgaacttgaaagtgatgttatgaatgctttcta |
270 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||| |||| |
|
|
| T |
24103750 |
tcaatacttcatatgaacttgagagtgatgttatgaatgctctcta |
24103705 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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