View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4919-Insertion-8 (Length: 72)
Name: NF4919-Insertion-8
Description: NF4919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4919-Insertion-8 |
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| [»] chr8 (2 HSPs) |
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| [»] chr3 (1 HSPs) |
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| [»] chr6 (1 HSPs) |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 65; Significance: 3e-29; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-29
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 25549233 - 25549169
Alignment:
| Q |
8 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
72 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25549233 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
25549169 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 6e-27
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 25555530 - 25555466
Alignment:
| Q |
8 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
72 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
25555530 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcatttctaccaata |
25555466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 65; Significance: 3e-29; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-29
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 20011299 - 20011363
Alignment:
| Q |
8 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
72 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20011299 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
20011363 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 6e-27; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-27
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 22621412 - 22621476
Alignment:
| Q |
8 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
72 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
22621412 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcatttctaccaata |
22621476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 6e-27; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-27
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 15157008 - 15157072
Alignment:
| Q |
8 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctaccaata |
72 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
15157008 |
agtctcagattcaattttcctcttactagttctcactctacaacttgaattcgtttctacaaata |
15157072 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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