View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4919_high_15 (Length: 244)

Name: NF4919_high_15
Description: NF4919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4919_high_15
NF4919_high_15
[»] chr3 (36 HSPs)
chr3 (4-226)||(43404416-43404657)
chr3 (116-226)||(43402473-43402583)
chr3 (133-226)||(5236922-5237013)
chr3 (119-159)||(27027270-27027310)
chr3 (119-159)||(30709279-30709319)
chr3 (119-175)||(40734095-40734151)
chr3 (125-176)||(39032044-39032095)
chr3 (119-157)||(21711767-21711805)
chr3 (125-175)||(35926038-35926088)
chr3 (119-156)||(7167825-7167862)
chr3 (119-199)||(16498657-16498735)
chr3 (123-176)||(24694673-24694726)
chr3 (119-156)||(27974454-27974491)
chr3 (119-156)||(36029659-36029696)
chr3 (119-159)||(27038605-27038645)
chr3 (119-175)||(48438763-48438819)
chr3 (119-157)||(16264895-16264933)
chr3 (119-153)||(37726244-37726278)
chr3 (122-156)||(40845221-40845255)
chr3 (119-156)||(4599050-4599087)
chr3 (119-156)||(4601271-4601308)
chr3 (119-156)||(10055825-10055862)
chr3 (119-156)||(10058047-10058084)
chr3 (119-156)||(10060269-10060306)
chr3 (119-156)||(10062491-10062528)
chr3 (119-156)||(10064713-10064750)
chr3 (119-156)||(10066935-10066972)
chr3 (119-156)||(10210998-10211035)
chr3 (127-156)||(22172690-22172719)
chr3 (119-156)||(27985978-27986015)
chr3 (127-156)||(28501180-28501209)
chr3 (127-156)||(28503347-28503376)
chr3 (127-156)||(40372284-40372313)
chr3 (119-155)||(37408057-37408093)
chr3 (119-159)||(40592265-40592305)
chr3 (119-175)||(40735026-40735082)
[»] chr8 (20 HSPs)
chr8 (116-226)||(4282942-4283052)
chr8 (119-159)||(5701972-5702012)
chr8 (119-176)||(4456555-4456612)
chr8 (119-156)||(7412894-7412931)
chr8 (119-155)||(3439108-3439144)
chr8 (127-158)||(10688646-10688677)
chr8 (127-157)||(25689589-25689619)
chr8 (127-156)||(4759562-4759591)
chr8 (127-156)||(10683767-10683796)
chr8 (119-156)||(15290163-15290200)
chr8 (119-156)||(15470532-15470569)
chr8 (127-156)||(18870049-18870078)
chr8 (127-156)||(25327692-25327721)
chr8 (127-156)||(30656225-30656254)
chr8 (127-156)||(33037315-33037344)
chr8 (127-156)||(36979957-36979986)
chr8 (127-156)||(39784353-39784382)
chr8 (119-176)||(42435723-42435779)
chr8 (119-156)||(42575852-42575889)
chr8 (119-159)||(23799112-23799152)
[»] chr6 (19 HSPs)
chr6 (116-226)||(603702-603812)
chr6 (119-175)||(24714919-24714975)
chr6 (133-202)||(33211673-33211740)
chr6 (126-176)||(22964245-22964295)
chr6 (126-176)||(23824098-23824148)
chr6 (119-176)||(10076685-10076742)
chr6 (119-175)||(5016989-5017045)
chr6 (119-159)||(5571769-5571809)
chr6 (119-159)||(31085966-31086006)
chr6 (127-158)||(14737113-14737144)
chr6 (127-157)||(5266595-5266625)
chr6 (119-156)||(6136490-6136527)
chr6 (127-156)||(11857510-11857539)
chr6 (127-156)||(14741954-14741983)
chr6 (127-156)||(22010217-22010246)
chr6 (127-156)||(30125046-30125075)
chr6 (119-156)||(34166686-34166723)
chr6 (119-159)||(18234647-18234687)
chr6 (119-175)||(21272482-21272538)
[»] chr1 (17 HSPs)
chr1 (116-220)||(37503930-37504034)
chr1 (133-226)||(44454771-44454862)
chr1 (119-176)||(37070314-37070371)
chr1 (119-175)||(13598948-13599004)
chr1 (119-159)||(21536133-21536173)
chr1 (119-182)||(16124201-16124264)
chr1 (119-199)||(13659799-13659877)
chr1 (119-176)||(29652361-29652418)
chr1 (119-176)||(37033801-37033857)
chr1 (119-155)||(13604116-13604152)
chr1 (133-176)||(10924835-10924878)
chr1 (133-176)||(31658850-31658893)
chr1 (127-157)||(24793694-24793724)
chr1 (127-156)||(39446025-39446054)
chr1 (127-156)||(41391128-41391157)
chr1 (127-156)||(44023405-44023434)
chr1 (119-159)||(3282270-3282310)
[»] chr5 (16 HSPs)
chr5 (132-226)||(535534-535627)
chr5 (132-220)||(533412-533499)
chr5 (119-176)||(14520776-14520833)
chr5 (125-175)||(12083677-12083727)
chr5 (125-156)||(15045222-15045253)
chr5 (127-158)||(31180771-31180802)
chr5 (127-158)||(43592795-43592826)
chr5 (119-153)||(36931864-36931898)
chr5 (127-156)||(1456666-1456695)
chr5 (119-176)||(11916465-11916522)
chr5 (127-156)||(27450352-27450381)
chr5 (127-156)||(29402578-29402607)
chr5 (127-156)||(30631891-30631920)
chr5 (127-156)||(43599261-43599290)
chr5 (127-156)||(43604753-43604782)
chr5 (127-156)||(43610245-43610274)
[»] chr4 (27 HSPs)
chr4 (119-176)||(16628366-16628423)
chr4 (119-176)||(16622787-16622844)
chr4 (119-159)||(38151931-38151971)
chr4 (125-176)||(6742915-6742966)
chr4 (120-175)||(25861527-25861582)
chr4 (119-176)||(3778095-3778152)
chr4 (119-156)||(5143809-5143846)
chr4 (119-176)||(6655336-6655392)
chr4 (119-156)||(8689057-8689094)
chr4 (123-159)||(9194161-9194197)
chr4 (119-159)||(10047929-10047969)
chr4 (127-157)||(29761181-29761211)
chr4 (127-156)||(3814548-3814577)
chr4 (119-156)||(5148244-5148281)
chr4 (119-156)||(5268712-5268749)
chr4 (127-156)||(9223927-9223956)
chr4 (127-156)||(9228714-9228743)
chr4 (127-156)||(18856252-18856281)
chr4 (127-156)||(18860464-18860493)
chr4 (127-156)||(24742520-24742549)
chr4 (119-176)||(36314724-36314781)
chr4 (119-176)||(36328933-36328990)
chr4 (135-228)||(48142687-48142778)
chr4 (127-156)||(51520993-51521022)
chr4 (119-176)||(54867725-54867782)
chr4 (127-156)||(56141539-56141568)
chr4 (136-176)||(54200399-54200439)
[»] chr7 (16 HSPs)
chr7 (133-202)||(26416925-26416992)
chr7 (123-176)||(46515827-46515880)
chr7 (119-175)||(79936-79992)
chr7 (119-159)||(21983806-21983846)
chr7 (119-156)||(31109090-31109127)
chr7 (119-159)||(21989470-21989510)
chr7 (134-176)||(4539064-4539106)
chr7 (133-202)||(30026495-30026562)
chr7 (127-156)||(2058547-2058576)
chr7 (127-156)||(4873664-4873693)
chr7 (127-156)||(12406800-12406829)
chr7 (127-156)||(20357056-20357085)
chr7 (127-156)||(21640366-21640395)
chr7 (119-156)||(47264209-47264246)
chr7 (119-151)||(21646590-21646622)
chr7 (127-155)||(24023847-24023875)
[»] scaffold0006 (4 HSPs)
scaffold0006 (119-175)||(6233-6289)
scaffold0006 (119-199)||(149560-149638)
scaffold0006 (119-159)||(3057-3097)
scaffold0006 (119-155)||(132773-132809)
[»] chr2 (17 HSPs)
chr2 (119-159)||(8389644-8389684)
chr2 (125-176)||(10706752-10706803)
chr2 (132-199)||(17057747-17057813)
chr2 (132-199)||(17085730-17085796)
chr2 (125-175)||(21630492-21630542)
chr2 (125-175)||(23077971-23078021)
chr2 (119-159)||(33528118-33528158)
chr2 (119-159)||(39483440-39483480)
chr2 (127-156)||(9295890-9295919)
chr2 (127-156)||(11098415-11098444)
chr2 (127-156)||(14292068-14292097)
chr2 (119-156)||(28258690-28258727)
chr2 (127-156)||(32247295-32247324)
chr2 (119-156)||(36757438-36757475)
chr2 (127-156)||(39811505-39811534)
chr2 (127-156)||(44310499-44310528)
chr2 (119-175)||(20522769-20522825)
[»] scaffold0286 (1 HSPs)
scaffold0286 (119-176)||(10938-10994)
[»] scaffold0036 (1 HSPs)
scaffold0036 (119-175)||(86134-86190)
[»] scaffold0665 (1 HSPs)
scaffold0665 (127-158)||(8214-8245)
[»] scaffold1455 (1 HSPs)
scaffold1455 (127-156)||(1737-1766)
[»] scaffold0464 (1 HSPs)
scaffold0464 (127-156)||(888-917)
[»] scaffold0135 (1 HSPs)
scaffold0135 (127-156)||(34582-34611)
[»] scaffold0098 (1 HSPs)
scaffold0098 (119-156)||(45746-45783)
[»] scaffold0491 (1 HSPs)
scaffold0491 (117-153)||(11698-11734)


Alignment Details
Target: chr3 (Bit Score: 136; Significance: 5e-71; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 43404657 - 43404416
Alignment:
Q  4 atgtcgaagaatatagcaagatgtacagaacaaagaaaatcttccaaatcaattctgacaaataatacatatctttttcgttcaaacaaaatgccaccat 103  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43404657 atgtccaataatgtagcaagatgtacagaacaaagaaaatcttccaaatcaattctgacaaataatacatatttttctcgttcaaacaaaatgccaccat 43404558  T
Q  104 aaagagtttgcg-------------------caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatg 184  Q
    ||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  43404557 aaagagtttgcgcaatgttgtaaagtgcattcaattgtgttttggaagaacagagaaatcgtgacacgatttcataagcctgtcacgatttttggtagtg 43404458  T
Q  185 ccgaaagcatgttttctggacgttcaatcgtgacaccatttt 226  Q
    |||| ||||||||||||||| ||||||||||||||| |||||    
T  43404457 ccgagagcatgttttctggatgttcaatcgtgacacgatttt 43404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 43402583 - 43402473
Alignment:
Q  116 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 215  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||  ||||| ||||||||| | | |||| ||||||||||||||| ||||||||||    
T  43402583 caattgtgttttggaagaatagagaaatcgtgaaacgatttcataagcgtgtcatgatttttggtagtaccgagagcatgttttctggatgttcaatcgt 43402484  T
Q  216 gacaccatttt 226  Q
    ||||| |||||    
T  43402483 gacacgatttt 43402473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 5237013 - 5236922
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccatttt 226  Q
    ||||||||||||||||||||||||||||||  ||||||||  |||||  ||||||| |||||||||||||   || |||||||||||| |||||    
T  5237013 aacagagaaatcgtgacacgatttcataagcgtgtcacga--tttggctatgccgagagcatgttttctgagtgtccaatcgtgacacaatttt 5236922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 27027310 - 27027270
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27027310 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 27027270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 30709279 - 30709319
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  30709279 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 30709319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 40734095 - 40734151
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  40734095 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacatgtcacgattt 40734151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 39032044 - 39032095
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  39032044 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 39032095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 21711805 - 21711767
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttc 157  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  21711805 ttgtggtttggaagaacagagaaatcgtgacacgatttc 21711767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 35926088 - 35926038
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  35926088 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 35926038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 7167862 - 7167825
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  7167862 ttgtgttctggaagaacagagaaatcgtgacacgattt 7167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 16498657 - 16498735
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 199  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| |  ||||||||  ||||| |||||||| ||||||||||    
T  16498657 ttgtggtttggagaaacagagaaatcgtgacatgatttcataggcgtgtcacga--tttggcaatgccgagagcatgtttt 16498735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 24694673 - 24694726
Alignment:
Q  123 gttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    |||||||||||||||||||||||||| |||||||||| |   ||||||||||||    
T  24694673 gttttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgatttt 24694726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 27974454 - 27974491
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  27974454 ttgtggtttggaagaacagagaaatcgtgacacgattt 27974491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 36029696 - 36029659
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  36029696 ttgtggtttggaagaacagagaaatcgtgacacgattt 36029659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 27038645 - 27038605
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  27038645 ttgtggtttggaaaaacagagaaatcgtgacacgatttcat 27038605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 48438819 - 48438763
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| |||| |||||||||||||||||||||||||||||| |   |||||||||||    
T  48438819 ttgtggtttgtaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 48438763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 16264933 - 16264895
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttc 157  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  16264933 ttgtggtttggaagaacagcgaaatcgtgacacgatttc 16264895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 37726278 - 37726244
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacga 153  Q
    ||||| |||||||||||||||||||||||||||||    
T  37726278 ttgtggtttggaagaacagagaaatcgtgacacga 37726244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 40845255 - 40845221
Alignment:
Q  122 tgttttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||| ||||||||||||||||||||||||||    
T  40845255 tgttttgggagaacagagaaatcgtgacacgattt 40845221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 4599087 - 4599050
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  4599087 ttgtggtttggaagaacagggaaatcgtgacacgattt 4599050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 4601308 - 4601271
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  4601308 ttgtggtttggaagaacagggaaatcgtgacacgattt 4601271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10055825 - 10055862
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10055825 ttgtggtttggaagaacagggaaatcgtgacacgattt 10055862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10058047 - 10058084
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10058047 ttgtggtttggaagaacagggaaatcgtgacacgattt 10058084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10060269 - 10060306
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10060269 ttgtggtttggaagaacagggaaatcgtgacacgattt 10060306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10062491 - 10062528
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10062491 ttgtggtttggaagaacagggaaatcgtgacacgattt 10062528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10064713 - 10064750
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10064713 ttgtggtttggaagaacagggaaatcgtgacacgattt 10064750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10066935 - 10066972
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10066935 ttgtggtttggaagaacagggaaatcgtgacacgattt 10066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 10210998 - 10211035
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10210998 ttgtggtttggaagaacagggaaatcgtgacacgattt 10211035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 22172690 - 22172719
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  22172690 tggaagaacagagaaatcgtgacacgattt 22172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 27985978 - 27986015
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  27985978 ttgtggtttggaataacagagaaatcgtgacacgattt 27986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 28501180 - 28501209
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  28501180 tggaagaacagagaaatcgtgacacgattt 28501209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 28503347 - 28503376
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  28503347 tggaagaacagagaaatcgtgacacgattt 28503376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 40372284 - 40372313
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  40372284 tggaagaacagagaaatcgtgacacgattt 40372313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 37408057 - 37408093
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatt 155  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  37408057 ttgtggtttggaagaacaaagaaatcgtgacacgatt 37408093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 40592265 - 40592305
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  40592265 ttgtggtttggaagaacggagaaatcgtgacatgatttcat 40592305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 40735026 - 40735082
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| |||||| ||||||| |||||||||||||||||||| |   |||||||||||    
T  40735026 ttgtggtttggatgaacagataaatcgtgacacgatttcatcaacgtgtcacgattt 40735082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 4282942 - 4283052
Alignment:
Q  116 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 215  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  4282942 caattgttttttggaagaatagagaaatcatgacacgatttcataagtgtgtcacgatttttggtagtgccgagagcatgttttctggatgttcaatcgt 4283041  T
Q  216 gacaccatttt 226  Q
    ||||| |||||    
T  4283042 gacacgatttt 4283052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 5701972 - 5702012
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  5701972 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 5702012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 4456612 - 4456555
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| |||||||||||| |||||||||||||||||||||| |   ||||||||||||    
T  4456612 ttgtggtttggaagaacaaagaaatcgtgacacgatttcatcaacgtgtcacgatttt 4456555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 7412931 - 7412894
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  7412931 ttgtggtttggaagaacagagaaatcgtgacacgattt 7412894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 3439108 - 3439144
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatt 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3439108 ttgtggtttggaagaacagagaaatcgtgacacgatt 3439144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Original strand, 10688646 - 10688677
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttca 158  Q
    ||||||||||||||||||||||||||||||||    
T  10688646 tggaagaacagagaaatcgtgacacgatttca 10688677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 25689589 - 25689619
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttc 157  Q
    |||||||||||||||||||||||||||||||    
T  25689589 tggaagaacagagaaatcgtgacacgatttc 25689619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 4759562 - 4759591
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  4759562 tggaagaacagagaaatcgtgacacgattt 4759591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 10683767 - 10683796
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  10683767 tggaagaacagagaaatcgtgacacgattt 10683796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 15290163 - 15290200
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  15290163 ttgtggtttggaagaacagggaaatcgtgacacgattt 15290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 15470532 - 15470569
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  15470532 ttgtggtttggaagaacagggaaatcgtgacacgattt 15470569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 18870049 - 18870078
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  18870049 tggaagaacagagaaatcgtgacacgattt 18870078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 25327692 - 25327721
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  25327692 tggaagaacagagaaatcgtgacacgattt 25327721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 30656254 - 30656225
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  30656254 tggaagaacagagaaatcgtgacacgattt 30656225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 33037315 - 33037344
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  33037315 tggaagaacagagaaatcgtgacacgattt 33037344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 36979986 - 36979957
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  36979986 tggaagaacagagaaatcgtgacacgattt 36979957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 39784353 - 39784382
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  39784353 tggaagaacagagaaatcgtgacacgattt 39784382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 42435779 - 42435723
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||| ||| ||||||||||||||||||| |||||||| |  ||||||||||||    
T  42435779 ttgtgttttagaa-aacagagaaatcgtgacacaatttcataggcgtgtcacgatttt 42435723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 42575889 - 42575852
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  42575889 ttgtggtttggaagaacagggaaatcgtgacacgattt 42575852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 23799112 - 23799152
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||| ||||||||||||||||| ||||||||||||    
T  23799112 ttgtggtttgaaagaacagagaaatcgtaacacgatttcat 23799152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 603812 - 603702
Alignment:
Q  116 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | || ||| |||||||||| |||| ||||||||||    
T  603812 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtgtgccacgatttttggtagtgtcgagagcatgttttttggatgttcaatcgt 603713  T
Q  216 gacaccatttt 226  Q
    ||||| |||||    
T  603712 gacacgatttt 603702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 24714975 - 24714919
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  24714975 ttgtggtttggaaaaacagagaaatcgtgacacgatttcataagtgtgtcacgattt 24714919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 33211740 - 33211673
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctg 202  Q
    |||||||||||||||||||||||||||| || ||||||||  |||||  ||||||| |||||||||||||    
T  33211740 aacagagaaatcgtgacacgatttcataggtgtgtcacga--tttggctatgccgagagcatgttttctg 33211673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 22964295 - 22964245
Alignment:
Q  126 ttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    |||||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  22964295 ttggaaaaacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 22964245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 23824098 - 23824148
Alignment:
Q  126 ttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    |||||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  23824098 ttggaaaaacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 23824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 10076685 - 10076742
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    |||||||||| ||||||||| ||||||||||| |||||||| ||  ||||||||||||    
T  10076685 ttgtgttttgaaagaacagaaaaatcgtgacatgatttcatcagcgtgtcacgatttt 10076742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 5016989 - 5017045
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| |||||||||||||| |||||||||||||||||||| |   |||||||||||    
T  5016989 ttgtggtttggaagaacagaaaaatcgtgacacgatttcatcaacgtgtcacgattt 5017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 5571769 - 5571809
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  5571769 ttgtgttttgggagaatagagaaatcgtgacacgatttcat 5571809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 31085966 - 31086006
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  31085966 ttgtggtttagaagaacagagaaatcgtgacacgatttcat 31086006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Original strand, 14737113 - 14737144
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttca 158  Q
    ||||||||||||||||||||||||||||||||    
T  14737113 tggaagaacagagaaatcgtgacacgatttca 14737144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Complemental strand, 5266625 - 5266595
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttc 157  Q
    |||||||||||||||||||||||||||||||    
T  5266625 tggaagaacagagaaatcgtgacacgatttc 5266595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 6136527 - 6136490
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  6136527 ttgtggtttggaagaacagggaaatcgtgacacgattt 6136490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 11857539 - 11857510
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  11857539 tggaagaacagagaaatcgtgacacgattt 11857510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 14741954 - 14741983
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  14741954 tggaagaacagagaaatcgtgacacgattt 14741983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 22010217 - 22010246
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  22010217 tggaagaacagagaaatcgtgacacgattt 22010246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 30125046 - 30125075
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  30125046 tggaagaacagagaaatcgtgacacgattt 30125075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 34166686 - 34166723
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  34166686 ttgtggtttggaagaacagggaaatcgtgacacgattt 34166723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 18234687 - 18234647
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  18234687 ttgtggtttggaagaacagagaaatgttgacacgatttcat 18234647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 21272482 - 21272538
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    |||||||||||| |||||| |||||||||||||  ||||||| |  |||||||||||    
T  21272482 ttgtgttttggaggaacagggaaatcgtgacacattttcataggcgtgtcacgattt 21272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 37504034 - 37503930
Alignment:
Q  116 caattgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgt 215  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||  |||||| |||||||| | || ||| ||||||||||||||| ||||||||||    
T  37504034 caattgtgttttgaaagaacagagaaatcgtaacacgatttcataagcgtgtcacaatttttggtagtgtcgagagcatgttttctggatgttcaatcgt 37503935  T
Q  216 gacac 220  Q
    |||||    
T  37503934 gacac 37503930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 44454771 - 44454862
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccatttt 226  Q
    |||| |||||||||||||||||||||||||  ||||||||  |||||  ||||||| |||||||||||||   || |||||||||||| |||||    
T  44454771 aacaaagaaatcgtgacacgatttcataagcgtgtcacga--tttggctatgccgagagcatgttttctgagtgtccaatcgtgacacgatttt 44454862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 37070371 - 37070314
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  37070371 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 37070314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 13599004 - 13598948
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  13599004 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 13598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 21536133 - 21536173
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  21536133 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 21536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 16124201 - 16124264
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaa 182  Q
    ||||| |||||||||||||||||||||||| |||||||||| |   |||||||||||| |||||    
T  16124201 ttgtggtttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgattttcggaaa 16124264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 13659877 - 13659799
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 199  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| |  ||||||||  ||||| |||||||| ||||||||||    
T  13659877 ttgtggtttggagaaacagagaaatcgtgacatgatttcataggcgtgtcacga--tttggcaatgccgagagcatgtttt 13659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 29652418 - 29652361
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| |||||||||||||||||||||||| |||||||||| |   ||||||||||||    
T  29652418 ttgtggtttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgatttt 29652361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 37033857 - 37033801
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  37033857 ttgtgttttagaa-aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 37033801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 13604116 - 13604152
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatt 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13604116 ttgtggtttggaagaacagagaaatcgtgacacgatt 13604152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 10924835 - 10924878
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    |||||||||||||||||||||||||||| |  ||||||||||||    
T  10924835 aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 10924878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 31658850 - 31658893
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    |||||||||||||||||||||||||||| |  ||||||||||||    
T  31658850 aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 31658893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 24793694 - 24793724
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttc 157  Q
    |||||||||||||||||||||||||||||||    
T  24793694 tggaagaacagagaaatcgtgacacgatttc 24793724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 39446054 - 39446025
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  39446054 tggaagaacagagaaatcgtgacacgattt 39446025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 41391157 - 41391128
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  41391157 tggaagaacagagaaatcgtgacacgattt 41391128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 44023405 - 44023434
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  44023405 tggaagaacagagaaatcgtgacacgattt 44023434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 3282310 - 3282270
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  3282310 ttgtggttaggaagaacagaaaaatcgtgacacgatttcat 3282270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 535534 - 535627
Alignment:
Q  132 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccatttt 226  Q
    |||||||||||||||||||||||||||||||  |||||| | |||||| | || ||| ||| ||||||||||| ||||| ||||||||| |||||    
T  535534 gaacagagaaatcgtgacacgatttcataagcgtgtcac-aattttggtagtgtcgagagcgtgttttctggatgttcagtcgtgacacgatttt 535627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 533412 - 533499
Alignment:
Q  132 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacac 220  Q
    |||| ||||||||||||||||||||||||||    |||||| |||||| | |||||| ||||||||||||| | |||||||||||||||    
T  533412 gaacggagaaatcgtgacacgatttcataagcgcatcacga-ttttggtagtgccgagagcatgttttctgcatgttcaatcgtgacac 533499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 14520833 - 14520776
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  14520833 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 14520776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 12083677 - 12083727
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  12083677 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 12083727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 156
Target Start/End: Complemental strand, 15045253 - 15045222
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||    
T  15045253 tttggaagaacagagaaatcgtgacacgattt 15045222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Complemental strand, 31180802 - 31180771
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttca 158  Q
    ||||||||||||||||||||||||||||||||    
T  31180802 tggaagaacagagaaatcgtgacacgatttca 31180771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Complemental strand, 43592826 - 43592795
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttca 158  Q
    ||||||||||||||||||||||||||||||||    
T  43592826 tggaagaacagagaaatcgtgacacgatttca 43592795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 36931864 - 36931898
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacga 153  Q
    ||||| |||||||||||||||||||||||||||||    
T  36931864 ttgtggtttggaagaacagagaaatcgtgacacga 36931898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 1456666 - 1456695
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  1456666 tggaagaacagagaaatcgtgacacgattt 1456695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 11916465 - 11916522
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| |||| |||||||||||||||||||||| ||||||| |   ||||||||||||    
T  11916465 ttgtggtttgaaagaacagagaaatcgtgacacaatttcatcaacgtgtcacgatttt 11916522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 27450381 - 27450352
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  27450381 tggaagaacagagaaatcgtgacacgattt 27450352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 29402578 - 29402607
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  29402578 tggaagaacagagaaatcgtgacacgattt 29402607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 30631920 - 30631891
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  30631920 tggaagaacagagaaatcgtgacacgattt 30631891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 43599290 - 43599261
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  43599290 tggaagaacagagaaatcgtgacacgattt 43599261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 43604782 - 43604753
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  43604782 tggaagaacagagaaatcgtgacacgattt 43604753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 43610274 - 43610245
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  43610274 tggaagaacagagaaatcgtgacacgattt 43610245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 16628366 - 16628423
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  16628366 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaatgtgtcacgatttt 16628423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 16622787 - 16622844
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  16622787 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 16622844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 38151931 - 38151971
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  38151931 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 38151971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 6742915 - 6742966
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  6742915 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 6742966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 25861527 - 25861582
Alignment:
Q  120 tgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    |||||||||| ||||||||||||||||||||||||||||| |   |||||||||||    
T  25861527 tgtgttttgggagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 25861582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 3778152 - 3778095
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |   ||||||||||||    
T  3778152 ttgtggtttggaagaacagagaaatcgtgacacgattacatcaacgtgtcacgatttt 3778095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 5143846 - 5143809
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5143846 ttgtggtttggaagaacagagaaatcgtgacacgattt 5143809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 6655336 - 6655392
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  6655336 ttgtgttttagaa-aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 6655392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 8689057 - 8689094
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8689057 ttgtggtttggaagaacagagaaatcgtgacacgattt 8689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 9194197 - 9194161
Alignment:
Q  123 gttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9194197 gttttggaagaacagagaaattgtgacacgatttcat 9194161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 10047969 - 10047929
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  10047969 ttgtggtttggaagaacagataaatcgtgacacgatttcat 10047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Complemental strand, 29761211 - 29761181
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttc 157  Q
    |||||||||||||||||||||||||||||||    
T  29761211 tggaagaacagagaaatcgtgacacgatttc 29761181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 3814577 - 3814548
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  3814577 tggaagaacagagaaatcgtgacacgattt 3814548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 5148281 - 5148244
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  5148281 ttgtggtttggaagaatagagaaatcgtgacacgattt 5148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 5268712 - 5268749
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  5268712 ttgtggtttggaagaacagagaaatcgtgacaggattt 5268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 9223927 - 9223956
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  9223927 tggaagaacagagaaatcgtgacacgattt 9223956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 9228714 - 9228743
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  9228714 tggaagaacagagaaatcgtgacacgattt 9228743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 18856281 - 18856252
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  18856281 tggaagaacagagaaatcgtgacacgattt 18856252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 18860493 - 18860464
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  18860493 tggaagaacagagaaatcgtgacacgattt 18860464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 24742549 - 24742520
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  24742549 tggaagaacagagaaatcgtgacacgattt 24742520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 36314724 - 36314781
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |   ||||||||||||    
T  36314724 ttgtggtttcgaagaatagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 36314781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 36328933 - 36328990
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |   ||||||||||||    
T  36328933 ttgtggtttcgaagaatagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 36328990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 48142687 - 48142778
Alignment:
Q  135 cagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctggacgttcaatcgtgacaccatttttg 228  Q
    ||||||||||||||||||||||   |||  |||||||| |||||| |||| ||| ||| ||||||| || ||| |||||||||||| |||||||    
T  48142687 cagagaaatcgtgacacgatttggaaagcgtgtcacga-ttttggtaatgtcgagagc-tgttttcagggcgtccaatcgtgacacaatttttg 48142778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 51521022 - 51520993
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  51521022 tggaagaacagagaaatcgtgacacgattt 51520993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 54867782 - 54867725
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||| |||||||||| |||||| ||||||||||||||||| |   ||||||||||||    
T  54867782 ttgtggtttggaagaatagagaagtcgtgacacgatttcatcaacgtgtcacgatttt 54867725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 56141539 - 56141568
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  56141539 tggaagaacagagaaatcgtgacacgattt 56141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 54200439 - 54200399
Alignment:
Q  136 agagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||||||||||||||||||| |  ||||||||||||    
T  54200439 agagaaatcgtgacacgatttcataggcgtgtcacgatttt 54200399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 26416925 - 26416992
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctg 202  Q
    ||||||||||||||||||||||||||||||  ||||||||  |||||  ||||||| |||||||||||||    
T  26416925 aacagagaaatcgtgacacgatttcataagcgtgtcacga--tttggttatgccgagagcatgttttctg 26416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 46515827 - 46515880
Alignment:
Q  123 gttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  46515827 gttttggaagaacagagaaatcgtgacacgatttcattaacgtgtcacgatttt 46515880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 79992 - 79936
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  79992 ttgtgatttggaagaacagagaaatcgtgacacgatttcattaacgtgtcacgattt 79936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 21983846 - 21983806
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  21983846 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 21983806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 31109090 - 31109127
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  31109090 ttgtggtttggaagaacagagaaatcgtgacacgattt 31109127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 21989510 - 21989470
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  21989510 ttgtggtttggaagaacagagaaatcgtgacaagatttcat 21989470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 4539106 - 4539064
Alignment:
Q  134 acagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4539106 acagagaaatcgtgacacgatttcataggcgtgtcacgatttt 4539064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 30026562 - 30026495
Alignment:
Q  133 aacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgttttctg 202  Q
    ||||||||||||||||||||||||| || |  ||||||||  |||||  ||||||| |||||||||||||    
T  30026562 aacagagaaatcgtgacacgatttcttaggcgtgtcacga--tttggctatgccgagagcatgttttctg 30026495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 2058576 - 2058547
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  2058576 tggaagaacagagaaatcgtgacacgattt 2058547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 4873693 - 4873664
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  4873693 tggaagaacagagaaatcgtgacacgattt 4873664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 12406829 - 12406800
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  12406829 tggaagaacagagaaatcgtgacacgattt 12406800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 20357056 - 20357085
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  20357056 tggaagaacagagaaatcgtgacacgattt 20357085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 21640395 - 21640366
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  21640395 tggaagaacagagaaatcgtgacacgattt 21640366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 47264246 - 47264209
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  47264246 ttgtggtttggaagaatagagaaatcgtgacacgattt 47264209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 21646622 - 21646590
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacac 151  Q
    ||||| |||||||||||||||||||||||||||    
T  21646622 ttgtggtttggaagaacagagaaatcgtgacac 21646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 24023847 - 24023875
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatt 155  Q
    |||||||||||||||||||||||||||||    
T  24023847 tggaagaacagagaaatcgtgacacgatt 24023875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 6289 - 6233
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  6289 ttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 6233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 149638 - 149560
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 199  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| |  ||||||||  ||||| |||||||| ||||||||||    
T  149638 ttgtggtttggagaaacagagaaatcgtgacatgatttcataggcgtgtcacga--tttggcaatgccgagagcatgtttt 149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 3097 - 3057
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  3097 ttgtggtttggaagaacagagaaatcatgacacgatttcat 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 132773 - 132809
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatt 155  Q
    ||||| |||||||||||||||||||||||||||||||    
T  132773 ttgtggtttggaagaacagagaaatcgtgacacgatt 132809  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 8389644 - 8389684
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  8389644 ttgtggtttggaagaacagagaaatcgtgacacgatttcat 8389684  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 10706752 - 10706803
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  10706752 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgatttt 10706803  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 17057813 - 17057747
Alignment:
Q  132 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 199  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||||| |||| ||| ||||||||||    
T  17057813 gaacagagaaatcgtgacacaatttcataagcgtgtcacg-tttttggcaatgtcgagagcatgtttt 17057747  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 17085796 - 17085730
Alignment:
Q  132 gaacagagaaatcgtgacacgatttcataagtctgtcacgatttttggaaatgccgaaagcatgtttt 199  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||||| |||| ||| ||||||||||    
T  17085796 gaacagagaaatcgtgacacaatttcataagcgtgtcacg-tttttggcaatgtcgagagcatgtttt 17085730  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 21630542 - 21630492
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  21630542 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 21630492  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 23077971 - 23078021
Alignment:
Q  125 tttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  23077971 tttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattt 23078021  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 33528118 - 33528158
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  33528118 ttgtggtttggaagaacagagaaatcgtgacacaatttcat 33528158  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 39483480 - 39483440
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcat 159  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  39483480 ttgtggtttggaagaacagagaaattgtgacacgatttcat 39483440  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 9295890 - 9295919
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  9295890 tggaagaacagagaaatcgtgacacgattt 9295919  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 11098415 - 11098444
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  11098415 tggaagaacagagaaatcgtgacacgattt 11098444  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 14292097 - 14292068
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  14292097 tggaagaacagagaaatcgtgacacgattt 14292068  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 28258690 - 28258727
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  28258690 ttgtggtttggaaaaacagagaaatcgtgacacgattt 28258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 32247324 - 32247295
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  32247324 tggaagaacagagaaatcgtgacacgattt 32247295  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 36757438 - 36757475
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  36757438 ttgtggtttggaagaacagaaaaatcgtgacacgattt 36757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 39811505 - 39811534
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  39811505 tggaagaacagagaaatcgtgacacgattt 39811534  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 44310499 - 44310528
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  44310499 tggaagaacagagaaatcgtgacacgattt 44310528  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 20522825 - 20522769
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| ||||||||||||||||||||||||||  ||||||| |   |||||||||||    
T  20522825 ttgtggtttggaagaacagagaaatcgtgacataatttcatcaacgtgtcacgattt 20522769  T

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Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 10938 - 10994
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgatttt 176  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||    
T  10938 ttgtgttttagaa-aacagagaaatcgtgacacgatttcataggcgtgtcacgatttt 10994  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 86190 - 86134
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgatttcataagtctgtcacgattt 175  Q
    ||||| |||||||||| |||||||||||||||||||||||| |   |||||||||||    
T  86190 ttgtggtttggaagaatagagaaatcgtgacacgatttcatcaacgtgtcacgattt 86134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Complemental strand, 8245 - 8214
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgatttca 158  Q
    ||||||||||||||||||||||||||||||||    
T  8245 tggaagaacagagaaatcgtgacacgatttca 8214  T

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Target: scaffold1455 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 1737 - 1766
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  1737 tggaagaacagagaaatcgtgacacgattt 1766  T

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Target: scaffold0464 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 917 - 888
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  917 tggaagaacagagaaatcgtgacacgattt 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 34582 - 34611
Alignment:
Q  127 tggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||    
T  34582 tggaagaacagagaaatcgtgacacgattt 34611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 45783 - 45746
Alignment:
Q  119 ttgtgttttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  45783 ttgtggtttggaagaacagagaaatcgtgacacaattt 45746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 11734 - 11698
Alignment:
Q  117 aattgtgttttggaagaacagagaaatcgtgacacga 153  Q
    ||||||| | |||||||||||||||||||||||||||    
T  11734 aattgtggtctggaagaacagagaaatcgtgacacga 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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