View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4920-Insertion-10 (Length: 527)
Name: NF4920-Insertion-10
Description: NF4920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4920-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 7 - 527
Target Start/End: Original strand, 32223602 - 32224129
Alignment:
| Q |
7 |
acatccgtcactcattgtttggtcattctctaaccaccaccatcaccaccacactaacccctatgcaattaaacttaactctggtttactcactccccat |
106 |
Q |
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| T |
32223602 |
acatccgtcactcattgtttggtcattctctaaccaccaccatcaccaccacactaacccctatgcaattaaacttaactctggtttactcactccccat |
32223701 |
T |
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| Q |
107 |
tcacatacagccacattcatagtcatacacatcactaactatacctagcaattaagctacattatcattattcaaagaaaaagccaaaacaaaattaaaa |
206 |
Q |
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| T |
32223702 |
tcacatacagccacattcatagtcatacacatcactaactatacctagcaattaagctacattatcattattcaaagaaaaagccaaaacaaaattaaaa |
32223801 |
T |
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| Q |
207 |
caaccaatgaatccggtcataacatttggttcatattcacaagtatatgtatgtatgta-------ctatagttgagagactaataacttaacttaccca |
299 |
Q |
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| T |
32223802 |
caaccaatgaatccggtcataacatttggttcatattcacaagtatatgtatgtatgtatgtactactatagttgagagactaataacttaacttaccca |
32223901 |
T |
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| Q |
300 |
ttacccataacccatttacagctaagaacttgtcatgnnnnnnntatcatgatggtaaaagtaaagggagaggattgaatacagattgcacaaatgtcat |
399 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223902 |
ttacccataacccatttacagctaagaacttgtcatgaaaaaaatatcatgatggtaaaagtaaagggagaggattgaatacagattgcacaaatgtcat |
32224001 |
T |
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| Q |
400 |
aaaaatgtttcactgttttcacaaaaatccttgttgttgctaaaaatagaacaaaaaacagaatcatccatccactactcaactttcacttcttccactc |
499 |
Q |
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| T |
32224002 |
aaaaatgtttcactgttttcacaaaaatccttgttgttgctaaaaatagaacaaaaaacagaatcatccatccactactcaactttcacttcttccactc |
32224101 |
T |
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| Q |
500 |
aactagttacaccattgatctgttttat |
527 |
Q |
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| T |
32224102 |
aactagttacaccattgatctgttttat |
32224129 |
T |
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