View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4920_low_21 (Length: 228)
Name: NF4920_low_21
Description: NF4920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4920_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 42035461 - 42035633
Alignment:
| Q |
39 |
attaattaattaatataagtaaatgtttcaccgtatgttaatataatcagtgtaagactattagaagttcataagatgtgtaacacatgtacgaatgaag |
138 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
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| T |
42035461 |
attaattaattaatataagtaaatgtttcaccatatgttaatataatgagtgtaagactattataagttcataagatgtgtaacacatgtaagaatgaag |
42035560 |
T |
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| Q |
139 |
aaaagttgtgtttataaaaagcctggttggtgct-gtttgtggggatatgaggagagggtttgccagttcatt |
210 |
Q |
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||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |
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| T |
42035561 |
aaaagttgtgtttataaaaagcctgtttgttgctggtttgtggggatatgaggagagggtttgccagttcatt |
42035633 |
T |
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