View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4922-Insertion-3 (Length: 426)
Name: NF4922-Insertion-3
Description: NF4922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4922-Insertion-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 8 - 426
Target Start/End: Original strand, 30264712 - 30265130
Alignment:
| Q |
8 |
gaaagtggatcgcgacaacaaaccctcacgacgcattgatttaacagcgtcccacattgcatcaaataaacaatttttacctaaaatatcaataaccaaa |
107 |
Q |
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| T |
30264712 |
gaaagtggatcgcgacaacaaaccctcacgacgcattgatttaacagcgtcccacattgcatcaaataaacaatttttacctaaaatatcaataaccaaa |
30264811 |
T |
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| Q |
108 |
ttccaagcatatggagtgtggttatgattaatacggtgaccggcccaacggaagaatttaactgattgagccgggaaccggtaagaaagtttgagaacat |
207 |
Q |
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| T |
30264812 |
ttccaagcatatggagtgtggttatgattaatacggtgaccggcccaacggaagaatttaactgattgagccgggaaccggtaagaaagtttgagaacat |
30264911 |
T |
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| Q |
208 |
tttcaacgtcttgtggggttaaattgatttgagaatcttcgagggatttttcaacggttaaagatgggtttgtggagattatttcaaagagggtttttgt |
307 |
Q |
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| T |
30264912 |
tttcaacgtcttgtggggttaaattgatttgagaatcttcgagggatttttcaacggttaaagatgggtttgtggagattatttcgaagagggtttttgt |
30265011 |
T |
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| Q |
308 |
tttacctaagggtgggattggtattgaagagtgtgttgaggtttttggtggtgatggagatgaaattgaatggtaatttctctttctgctaacattcatg |
407 |
Q |
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| T |
30265012 |
tttacctaagggtgggattggtattggagagtgtgttgaggtttttggtggtgatggagatgaaattgaatggtaatttctctttctgctaacattcatg |
30265111 |
T |
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| Q |
408 |
gttcgtcttcttcttcttc |
426 |
Q |
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| T |
30265112 |
gttcgtcttcttcttcttc |
30265130 |
T |
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