View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4923-Insertion-9 (Length: 387)
Name: NF4923-Insertion-9
Description: NF4923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4923-Insertion-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 8 - 387
Target Start/End: Original strand, 4439016 - 4439396
Alignment:
| Q |
8 |
tatatttataactttttataagccaacggaggatccaagtaatttaatgataaatagttttttaaaaaa-tacattatagaacaattttattgaagaaat |
106 |
Q |
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| T |
4439016 |
tatatttataactttttataagccaacggaggatccaagtaatttaatgataaatagtttttaaaaaaaatatattatagaacaattttattgaagaaat |
4439115 |
T |
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| Q |
107 |
gttctattgaggaaatagatttgnnnnnnnttgtgagaaagatttgaaagaattattattatcttatagtggtgtgtatatattgatagaggagtataga |
206 |
Q |
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| T |
4439116 |
gttctattgaggaaatagatttgaaaaaaattgtgagaaagatttgaaagaattattattatcttatagtggtgtgtatatattgatagaggagtataga |
4439215 |
T |
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| Q |
207 |
atcagcaaagaaaacgtttttctcctaccaaaacaaagaaaacgtttctctcctaccaaaacaaaggaggagtatagtatccaaacttcttcaccttttt |
306 |
Q |
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| T |
4439216 |
atcaacaaagaaagcgtttctctcctaccaaaacacagaaagcgtttctctcctaccaaaacaaaggaggagtatagtatccaaacttcttcacctttct |
4439315 |
T |
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| Q |
307 |
gccatcatctgaatacgttgttgcatcaaagaaaaaagaaatcactagaaaggcaagtgttcaaacgacaatggcagagtc |
387 |
Q |
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| T |
4439316 |
gccatcatctgaatacgttgttgcatcaaagaaaaaagtaatcactagaaaggcaagtgttcaaacgacaatggcagagtc |
4439396 |
T |
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Target: chr4 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 8397888 - 8397860
Alignment:
| Q |
137 |
ttgtgagaaagatttgaaagaattattat |
165 |
Q |
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| T |
8397888 |
ttgtgagaaagatttgaaagaattattat |
8397860 |
T |
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