View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4924-Insertion-6 (Length: 494)

Name: NF4924-Insertion-6
Description: NF4924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4924-Insertion-6
NF4924-Insertion-6
[»] chr7 (31 HSPs)
chr7 (240-370)||(4715299-4715433)
chr7 (257-365)||(4704417-4704524)
chr7 (7-80)||(30756730-30756803)
chr7 (300-360)||(4834053-4834114)
chr7 (273-369)||(4700972-4701067)
chr7 (7-80)||(13796840-13796913)
chr7 (7-71)||(8001466-8001530)
chr7 (7-71)||(47590418-47590482)
chr7 (330-369)||(4705901-4705940)
chr7 (8-71)||(46700143-46700206)
chr7 (416-494)||(27727141-27727219)
chr7 (7-72)||(5792903-5792968)
chr7 (416-461)||(7238492-7238537)
chr7 (416-461)||(28924827-28924872)
chr7 (7-63)||(12141236-12141292)
chr7 (7-71)||(19296977-19297041)
chr7 (9-69)||(19404679-19404739)
chr7 (7-71)||(39171510-39171574)
chr7 (309-359)||(4788766-4788817)
chr7 (416-459)||(10463212-10463255)
chr7 (415-456)||(4926714-4926755)
chr7 (416-461)||(10620436-10620481)
chr7 (416-461)||(47792180-47792225)
chr7 (11-80)||(48316723-48316792)
chr7 (415-459)||(4900192-4900236)
chr7 (417-457)||(6331234-6331274)
chr7 (416-456)||(6589288-6589328)
chr7 (417-461)||(22378375-22378419)
chr7 (415-459)||(27728087-27728131)
chr7 (7-63)||(28044684-28044740)
chr7 (7-71)||(48061529-48061593)
[»] chr6 (21 HSPs)
chr6 (7-71)||(67921-67985)
chr6 (7-71)||(606310-606374)
chr6 (7-71)||(4010432-4010496)
chr6 (416-461)||(8710173-8710218)
chr6 (416-460)||(10915641-10915685)
chr6 (7-71)||(29255366-29255430)
chr6 (419-461)||(16736571-16736613)
chr6 (416-461)||(5974224-5974269)
chr6 (416-461)||(22731913-22731958)
chr6 (7-80)||(30608426-30608499)
chr6 (7-71)||(127775-127839)
chr6 (417-461)||(15720979-15721023)
chr6 (7-71)||(23128724-23128788)
chr6 (7-71)||(33053088-33053152)
chr6 (7-71)||(34018666-34018730)
chr6 (416-459)||(2087680-2087723)
chr6 (9-67)||(31852117-31852175)
chr6 (415-456)||(22732330-22732371)
chr6 (31-80)||(32802676-32802725)
chr6 (415-459)||(17697304-17697348)
chr6 (416-460)||(28476135-28476179)
[»] chr8 (36 HSPs)
chr8 (7-71)||(24186579-24186643)
chr8 (7-71)||(10377796-10377860)
chr8 (7-61)||(40619001-40619055)
chr8 (7-71)||(20553159-20553223)
chr8 (7-71)||(37971390-37971454)
chr8 (417-459)||(5250305-5250347)
chr8 (415-461)||(41590253-41590299)
chr8 (417-458)||(547337-547378)
chr8 (416-461)||(8784910-8784955)
chr8 (7-80)||(9637318-9637391)
chr8 (10-71)||(17693532-17693593)
chr8 (7-80)||(23230750-23230823)
chr8 (420-461)||(36470743-36470784)
chr8 (7-71)||(3673548-3673612)
chr8 (7-63)||(14544829-14544885)
chr8 (7-71)||(16928675-16928739)
chr8 (7-63)||(20559670-20559726)
chr8 (7-63)||(20571232-20571288)
chr8 (417-461)||(25101877-25101921)
chr8 (416-459)||(6018371-6018414)
chr8 (8-71)||(7883159-7883222)
chr8 (9-63)||(16247149-16247203)
chr8 (17-71)||(41684499-41684553)
chr8 (416-450)||(42499294-42499328)
chr8 (7-80)||(5046860-5046933)
chr8 (415-456)||(5695826-5695867)
chr8 (416-461)||(6590598-6590643)
chr8 (416-457)||(21159762-21159803)
chr8 (7-35)||(6219946-6219974)
chr8 (415-459)||(6413598-6413642)
chr8 (7-63)||(7677209-7677265)
chr8 (415-455)||(12469345-12469385)
chr8 (7-71)||(31013526-31013590)
chr8 (7-71)||(33347439-33347503)
chr8 (7-71)||(34609943-34610007)
chr8 (7-63)||(40211228-40211284)
[»] chr3 (32 HSPs)
chr3 (7-71)||(23799830-23799894)
chr3 (7-71)||(10233174-10233238)
chr3 (7-71)||(26275739-26275803)
chr3 (7-80)||(12050559-12050632)
chr3 (7-80)||(52923028-52923101)
chr3 (7-71)||(4711586-4711650)
chr3 (7-71)||(10108340-10108404)
chr3 (7-71)||(10229580-10229644)
chr3 (7-71)||(21431717-21431781)
chr3 (7-71)||(48650654-48650718)
chr3 (9-63)||(20464898-20464952)
chr3 (415-461)||(38174236-38174282)
chr3 (415-461)||(53517699-53517745)
chr3 (416-461)||(14525122-14525167)
chr3 (7-71)||(9998571-9998635)
chr3 (7-71)||(21533729-21533793)
chr3 (415-459)||(40762516-40762560)
chr3 (418-461)||(45419703-45419746)
chr3 (416-458)||(29348609-29348651)
chr3 (7-69)||(43488512-43488574)
chr3 (415-444)||(32147944-32147973)
chr3 (416-461)||(46295388-46295433)
chr3 (7-63)||(7448842-7448898)
chr3 (7-63)||(7456984-7457040)
chr3 (7-71)||(19619818-19619881)
chr3 (7-63)||(21313140-21313196)
chr3 (422-458)||(28260538-28260574)
chr3 (7-71)||(35175508-35175572)
chr3 (7-71)||(38545903-38545967)
chr3 (416-456)||(44808755-44808795)
chr3 (8-80)||(46220768-46220840)
chr3 (7-71)||(54149095-54149159)
[»] chr2 (36 HSPs)
chr2 (7-71)||(37876527-37876591)
chr2 (9-71)||(29279491-29279553)
chr2 (416-461)||(6458475-6458520)
chr2 (7-71)||(7646593-7646657)
chr2 (7-71)||(36943042-36943106)
chr2 (7-71)||(4778868-4778932)
chr2 (416-460)||(8737743-8737787)
chr2 (7-71)||(31128701-31128765)
chr2 (7-62)||(29173650-29173705)
chr2 (415-461)||(13371910-13371956)
chr2 (416-462)||(29809170-29809216)
chr2 (415-461)||(35498885-35498931)
chr2 (7-64)||(19062280-19062337)
chr2 (7-63)||(7448362-7448418)
chr2 (7-71)||(9169179-9169243)
chr2 (7-71)||(10929780-10929844)
chr2 (7-71)||(17994651-17994715)
chr2 (7-71)||(31788571-31788635)
chr2 (7-71)||(38445281-38445345)
chr2 (413-456)||(19176682-19176725)
chr2 (416-459)||(31436374-31436417)
chr2 (40-83)||(41694769-41694812)
chr2 (415-461)||(14200879-14200925)
chr2 (25-71)||(18695187-18695233)
chr2 (415-461)||(25666337-25666383)
chr2 (415-461)||(44286601-44286647)
chr2 (7-80)||(1421791-1421864)
chr2 (416-461)||(7439554-7439599)
chr2 (417-450)||(30749468-30749501)
chr2 (416-461)||(33832040-33832085)
chr2 (416-461)||(41121073-41121118)
chr2 (7-63)||(4041523-4041579)
chr2 (415-459)||(4327933-4327977)
chr2 (7-71)||(7677794-7677858)
chr2 (7-71)||(31210528-31210592)
chr2 (7-63)||(33585664-33585720)
[»] chr5 (23 HSPs)
chr5 (7-80)||(34945497-34945570)
chr5 (416-461)||(9687447-9687492)
chr5 (416-461)||(37103365-37103410)
chr5 (7-71)||(6217002-6217066)
chr5 (7-71)||(13007333-13007397)
chr5 (7-67)||(15571590-15571650)
chr5 (422-461)||(41192898-41192937)
chr5 (416-458)||(4463096-4463138)
chr5 (7-68)||(7036323-7036384)
chr5 (7-71)||(10722865-10722929)
chr5 (7-78)||(11875491-11875562)
chr5 (415-450)||(14049671-14049706)
chr5 (415-461)||(2004281-2004327)
chr5 (415-461)||(8404309-8404355)
chr5 (416-450)||(9924578-9924612)
chr5 (7-37)||(17523362-17523392)
chr5 (7-80)||(14082307-14082380)
chr5 (416-461)||(36876187-36876232)
chr5 (415-459)||(1683492-1683536)
chr5 (7-71)||(9113645-9113709)
chr5 (7-71)||(11867753-11867817)
chr5 (7-71)||(26825534-26825598)
chr5 (7-71)||(38597901-38597965)
[»] chr4 (34 HSPs)
chr4 (7-71)||(22611308-22611372)
chr4 (7-71)||(53811153-53811217)
chr4 (415-461)||(3872960-3873006)
chr4 (9-71)||(32766641-32766703)
chr4 (7-80)||(45418637-45418710)
chr4 (7-63)||(4142680-4142736)
chr4 (7-63)||(54021985-54022041)
chr4 (416-461)||(6589099-6589144)
chr4 (7-68)||(48257555-48257616)
chr4 (417-461)||(7617335-7617379)
chr4 (7-71)||(19853432-19853496)
chr4 (7-71)||(24098987-24099051)
chr4 (416-460)||(28448306-28448350)
chr4 (7-71)||(33921179-33921243)
chr4 (7-71)||(36161836-36161900)
chr4 (9-80)||(43510323-43510394)
chr4 (415-461)||(3862404-3862449)
chr4 (415-461)||(3871161-3871206)
chr4 (427-461)||(20177772-20177806)
chr4 (10-80)||(29120290-29120360)
chr4 (417-459)||(35821049-35821091)
chr4 (416-461)||(22068432-22068477)
chr4 (417-450)||(38114154-38114187)
chr4 (416-461)||(51395529-51395574)
chr4 (7-80)||(56040557-56040630)
chr4 (7-71)||(2520904-2520968)
chr4 (7-71)||(9048789-9048853)
chr4 (415-459)||(10085408-10085452)
chr4 (7-63)||(21662562-21662618)
chr4 (7-63)||(21671326-21671382)
chr4 (7-71)||(21686162-21686226)
chr4 (417-461)||(33177338-33177382)
chr4 (417-461)||(47309768-47309812)
chr4 (416-460)||(47379094-47379138)
[»] chr1 (26 HSPs)
chr1 (7-71)||(32395106-32395170)
chr1 (7-71)||(21947538-21947602)
chr1 (10-71)||(27580048-27580109)
chr1 (415-456)||(33707284-33707325)
chr1 (7-68)||(35461972-35462033)
chr1 (416-461)||(47008592-47008637)
chr1 (7-71)||(4413222-4413286)
chr1 (415-458)||(28701253-28701296)
chr1 (415-461)||(43505101-43505147)
chr1 (9-71)||(44915749-44915811)
chr1 (416-461)||(2059680-2059725)
chr1 (415-456)||(5430479-5430520)
chr1 (11-80)||(5983948-5984017)
chr1 (415-444)||(12896867-12896896)
chr1 (10-71)||(13144732-13144793)
chr1 (416-461)||(21794667-21794712)
chr1 (416-461)||(28480009-28480054)
chr1 (416-461)||(46517087-46517132)
chr1 (7-71)||(3228377-3228441)
chr1 (16-68)||(11462405-11462457)
chr1 (7-71)||(14872747-14872811)
chr1 (419-459)||(20357270-20357310)
chr1 (419-459)||(20562645-20562685)
chr1 (416-456)||(30742661-30742701)
chr1 (7-71)||(45415666-45415730)
chr1 (415-459)||(48410480-48410524)
[»] scaffold0121 (1 HSPs)
scaffold0121 (9-80)||(31185-31256)
[»] scaffold0562 (1 HSPs)
scaffold0562 (415-461)||(3779-3825)
[»] scaffold0262 (1 HSPs)
scaffold0262 (7-80)||(1730-1803)
[»] scaffold0884 (1 HSPs)
scaffold0884 (7-71)||(1893-1957)
[»] scaffold0017 (1 HSPs)
scaffold0017 (7-71)||(32667-32731)
[»] scaffold0050 (1 HSPs)
scaffold0050 (7-80)||(65953-66026)
[»] scaffold0036 (1 HSPs)
scaffold0036 (416-461)||(17293-17338)
[»] scaffold0445 (1 HSPs)
scaffold0445 (417-461)||(5834-5878)
[»] scaffold0088 (1 HSPs)
scaffold0088 (7-71)||(50881-50945)
[»] scaffold0571 (1 HSPs)
scaffold0571 (415-461)||(8786-8831)
[»] scaffold1190 (1 HSPs)
scaffold1190 (416-461)||(118-163)
[»] scaffold0514 (1 HSPs)
scaffold0514 (416-461)||(6097-6142)
[»] scaffold0219 (1 HSPs)
scaffold0219 (10-63)||(14799-14851)
[»] scaffold0888 (1 HSPs)
scaffold0888 (47-83)||(1586-1622)
[»] scaffold0049 (1 HSPs)
scaffold0049 (7-71)||(71220-71284)
[»] scaffold0021 (1 HSPs)
scaffold0021 (7-63)||(4277-4333)


Alignment Details
Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 370
Target Start/End: Original strand, 4715299 - 4715433
Alignment:
Q  240 attaacaaaatggtcaatttctattttaaaaac---gacgttttggagctttacccgtgactttgttttaaatatcttggatgccaaaattttca-aaga 335  Q
    |||| ||||||||||   |||||||||| ||||   ||||||||||||||||   ||||||| || ||||| |||||| ||||||||||| |||  ||||    
T  4715299 attagcaaaatggtcggattctattttagaaacaaagacgttttggagctttctgcgtgactatgctttaattatcttagatgccaaaatgttcctaaga 4715398  T
Q  336 cttcaccaagtcttcgtcttcactccagcatccat 370  Q
    |||||||||||||||||||| |||| |||||||||    
T  4715399 cttcaccaagtcttcgtctttactcgagcatccat 4715433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 365
Target Start/End: Original strand, 4704417 - 4704524
Alignment:
Q  257 tttctattttaaaaacgacgttttggagctttacccgtgactttgttttaaatatcttggatgccaaaattttc-aaagacttcaccaagtcttcgtctt 355  Q
    ||||||||| ||| | |||||||||| |||||  ||||||||  |||| ||||||||| ||| ||||||| ||| |||||||||||||||||||||||||    
T  4704417 tttctatttaaaataagacgttttggtgctttctccgtgact--gtttaaaatatctttgataccaaaatattccaaagacttcaccaagtcttcgtctt 4704514  T
Q  356 cactccagca 365  Q
    ||||| ||||    
T  4704515 cactcgagca 4704524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 30756803 - 30756730
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||||||||||||  ||||||| |||||||||||||||||||||||| || |||||    
T  30756803 acgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcattttgtcgtt 30756730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 4834053 - 4834114
Alignment:
Q  300 tgttttaaatatcttggatgccaaaattttc-aaagacttcaccaagtcttcgtcttcactc 360  Q
    |||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4834053 tgttataaatatcttagatgccaaaatattctaaagacttcaccaagtcttcgtcttcactc 4834114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 369
Target Start/End: Original strand, 4700972 - 4701067
Alignment:
Q  273 gacgttttggagctttacccgtgactttgttttaaatatcttggatgccaaaattttc-aaagacttcaccaagtcttcgtcttcactccagcatcca 369  Q
    ||||||||||||||||  | |||||| |  |||||||||||| |||| |||||| ||| |||||||||||||||||||||| |||||||  |||||||    
T  4700972 gacgttttggagctttctctgtgactat--tttaaatatcttagatggcaaaatattccaaagacttcaccaagtcttcgtattcactcgggcatcca 4701067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 13796913 - 13796840
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || ||||||||||| |  ||||||| |||||||||||||||| ||||||| || |||||    
T  13796913 acgttgcagatccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggcattttgtcgtt 13796840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 8001530 - 8001466
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| || || |||||||||||||  ||||||  ||||||||||||||||||||||||    
T  8001530 acgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggcat 8001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 47590418 - 47590482
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||| ||||| || ||||||||||||| |||||||  |||||||||||||||| |||||||    
T  47590418 acgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggcat 47590482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 4705901 - 4705940
Alignment:
Q  330 caaagacttcaccaagtcttcgtcttcactccagcatcca 369  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  4705901 caaagacttcaccaagtcttcgtcttcactcgagcatcca 4705940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 46700143 - 46700206
Alignment:
Q  8 cgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||| || ||||  |||||||  |||||| |||||||||||||||||||||||||    
T  46700143 cgttgcagatccggaagcatggatatttcggtgacttagattttatcatattatttataggcat 46700206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 494
Target Start/End: Original strand, 27727141 - 27727219
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctacagnnnnnnnnttacttctaattttagttcctatt 494  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||         ||||||||||||||||| ||||||    
T  27727141 taagtttactccttacttaattttaataggtttttaagtccctacaaaaaaaaaattacttctaattttagtccctatt 27727219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 5792903 - 5792968
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcata 72  Q
    |||||||||||| | || ||| || ||||||  |||||| ||||||||||||||||||||||||||    
T  5792903 acgttgcagatctggaagcataagaatttcgatgacttatattttatcatattatttataggcata 5792968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 7238492 - 7238537
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||    
T  7238492 taagtttaatccttatttaattttaataggttttttagtccctaca 7238537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 28924872 - 28924827
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||    
T  28924872 taagtttaatccttacttaattttaatagcttttttagtccctaca 28924827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 12141292 - 12141236
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||| ||||||||  |||||| |||||||||||||||||    
T  12141292 acgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattattt 12141236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 19296977 - 19297041
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||   |||||| |||||||||||||||| |||||||    
T  19296977 acgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcat 19297041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 19404739 - 19404679
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggc 69  Q
    |||||||||||| || ||||||||||||   |||||| ||||||||||||||||| |||||    
T  19404739 gttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggc 19404679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 39171574 - 39171510
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||  |||||||||||||||| |||||||    
T  39171574 acgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcat 39171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 4788766 - 4788817
Alignment:
Q  309 tatcttggatgccaaaattttc-aaagacttcaccaagtcttcgtcttcact 359  Q
    |||||||||| ||||||  ||| |||||||||||||||||||||||||||||    
T  4788766 tatcttggataccaaaacattccaaagacttcaccaagtcttcgtcttcact 4788817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 10463212 - 10463255
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    |||||||| | |||||||||||||||||| ||||||||||||||    
T  10463212 taagtttagtccttacttaattttaatagctttttcagtcccta 10463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 4926755 - 4926714
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    |||| |||||| |||||||||||||||||||||||| |||||    
T  4926755 ttaaatttaatccttacttaattttaataggttttttagtcc 4926714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 10620436 - 10620481
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  10620436 taagtttagtccttacttaattttaataggttttttagtccgtaca 10620481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 47792225 - 47792180
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  47792225 taagtttagtccttacttaattttaataggttttttagtccttaca 47792180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 48316792 - 48316723
Alignment:
Q  11 tgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||| || |||| |||||||| ||| |||  |||||||||||||||| ||||||| || |||||    
T  48316792 tgcagatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcattttgtcgtt 48316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 4900236 - 4900192
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||||| | |||||||||||||||||| ||| ||||||||    
T  4900236 ttaagtttaatccatacttaattttaataggtcttttagtcccta 4900192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 457
Target Start/End: Complemental strand, 6331274 - 6331234
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccc 457  Q
    ||||||||| |||||||||||||||||| ||||| ||||||    
T  6331274 aagtttaatccttacttaattttaatagattttttagtccc 6331234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 6589328 - 6589288
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    |||||||| | |||||||||||||||||||||||| |||||    
T  6589328 taagtttagtccttacttaattttaataggttttttagtcc 6589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 22378375 - 22378419
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||    
T  22378375 aagtttaatccttacttaattttaatagattttttagtccttaca 22378419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 27728131 - 27728087
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||||| |||||||||||||||||| | ||| ||||||||    
T  27728131 ttaagtttaatccttacttaattttaatagttcttttagtcccta 27728087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 28044740 - 28044684
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| ||||||| ||||||||  || |||  ||||||||||||||||    
T  28044740 acgttgcagatccggaaacatgggtatttcggtgatttaggttttatcatattattt 28044684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 48061529 - 48061593
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||  || |||||||||||||  || |||  |||||||||||||||| |||||||    
T  48061529 acgttgcagatccttaagcatgagtatttcggtgatttaggttttatcatattatttgtaggcat 48061593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 67985 - 67921
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| ||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  67985 acgttgcagatccggaaacatgggtatttcggcgacttaagttttatcatattatttataggcat 67921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 606310 - 606374
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  606310 acgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcat 606374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 4010496 - 4010432
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||||||||||||  |||||| | |||||||||||||||||||||||    
T  4010496 acgttgcagatccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcat 4010432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 8710218 - 8710173
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  8710218 taagtttagttcttacttaattttaataggttttttagtccctaca 8710173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 460
Target Start/End: Complemental strand, 10915685 - 10915641
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctac 460  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  10915685 taagtttaatccttacttaattttaataggttttttagtccctac 10915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 29255430 - 29255366
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||| |||||||| ||||||| ||||||||  |||||| ||||||||||||||||| |||||||    
T  29255430 acgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtaggcat 29255366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 461
Target Start/End: Original strand, 16736571 - 16736613
Alignment:
Q  419 gtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  16736571 gtttaatccttacttaattttaataggttttttagtccctaca 16736613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 5974224 - 5974269
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||    
T  5974224 taagtttagttcttacttaattttaataggttttttagtccgtaca 5974269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 22731913 - 22731958
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||    
T  22731913 taagtttaatccttacttaattttaataggttttttagtccttaca 22731958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 30608499 - 30608426
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||| | || |||| ||||||||  |||||| ||||||||||||||||| ||||||| ||| ||||    
T  30608499 acgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtaggcattttaccgtt 30608426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 127775 - 127839
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| || || |||||||||||||  || ||| ||||||||||||||||| |||||||    
T  127775 acgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcat 127839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 15720979 - 15721023
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  15720979 aagtttaatccttacttaattttaatagatttttaagtccctaca 15721023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 23128724 - 23128788
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||| ||||||| || |||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  23128724 acgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcat 23128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 33053152 - 33053088
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||||   ||||||| |||||||||||||||| |||||||    
T  33053152 acgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcat 33053088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 34018666 - 34018730
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||||||||||   ||||||  |||||||||||||||| |||||||    
T  34018666 acgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcat 34018730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 2087723 - 2087680
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    |||||||||| ||| |||||||||||||||||||| ||||||||    
T  2087723 taagtttaatccttgcttaattttaataggttttttagtcccta 2087680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 31852175 - 31852117
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttatag 67  Q
    |||||||||||| || ||||||||||  |  || |||||||||||||||||||||||||    
T  31852175 gttgcagatccggaagcatgagtattctggtgatttaaattttatcatattatttatag 31852117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 22732371 - 22732330
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    ||||||||| | |||||||||||||||||||||||| |||||    
T  22732371 ttaagtttagtccttacttaattttaataggttttttagtcc 22732330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 32802676 - 32802725
Alignment:
Q  31 tatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||  |||||||||||||||||||||||| |||| || ||||||||    
T  32802676 tatttcggtgacttaaattttatcatattatttgtaggtattttatcgtt 32802725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 17697304 - 17697348
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| | ||| |||||||||||||||||||| ||||||||    
T  17697304 ttaagtttagtccttgcttaattttaataggttttttagtcccta 17697348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 28476135 - 28476179
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctac 460  Q
    |||||||| | ||||| |||||||||||||||||| |||||||||    
T  28476135 taagtttagtccttacataattttaataggttttttagtccctac 28476179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 24186643 - 24186579
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||| |||| |||||||   ||||||||||||||||||||||||||||||||    
T  24186643 acgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattatttataggcat 24186579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10377796 - 10377860
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||||| |||||||| |||||||||||||||| |||||||    
T  10377796 acgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcat 10377860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 40619055 - 40619001
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattat 61  Q
    |||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  40619055 acgttgcagatccagaagcatgagtatttcgcagacttaaattttatcatattat 40619001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 20553223 - 20553159
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||||||||||||  ||||||  |||||||||||||||| |||||||    
T  20553223 acgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcat 20553159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 37971390 - 37971454
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| ||||||||||||||||  ||||||  |||||||| ||||||| |||||||    
T  37971390 acgttgcagatccggaaacatgagtatttcggtgacttaggttttatcacattatttgtaggcat 37971454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 459
Target Start/End: Original strand, 5250305 - 5250347
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  5250305 aagtttaatccttacttaattttaataggttttttagtcccta 5250347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 41590253 - 41590299
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||    
T  41590253 ttaagtttagtccttacttaattttaataggttttttagtccctaca 41590299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 458
Target Start/End: Complemental strand, 547378 - 547337
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccct 458  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  547378 aagtttaatccttacttaattttaataggttttttagtccct 547337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 8784955 - 8784910
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||    
T  8784955 taagtttagtccttacttaattttaataggttttttagtccctaca 8784910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 9637391 - 9637318
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    ||||||||||| || ||||||||||||||||   |||||  |||||||||||||||| ||||||| || |||||    
T  9637391 acgttgcagattcggaaacatgagtatttcggtaacttaggttttatcatattatttttaggcattttgtcgtt 9637318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 17693593 - 17693532
Alignment:
Q  10 ttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| || |||||||||||||  ||||||  |||||||||||||||| |||||||    
T  17693593 ttgcagatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtaggcat 17693532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 23230750 - 23230823
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| ||||||||  ||||||  |||||||||||||||| ||||||| || |||||    
T  23230750 acgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgtt 23230823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 36470743 - 36470784
Alignment:
Q  420 tttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  36470743 tttaatccttacttaattttaataggttttttagtccctaca 36470784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 3673548 - 3673612
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||||||||||   ||||||| ||| |||||||||||| |||||||    
T  3673548 acgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcat 3673612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 14544885 - 14544829
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||| | ||||||  ||||||||||||||||||||||||    
T  14544885 acgttgcagatccggaagcatgggaatttcggtgacttaaattttatcatattattt 14544829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 16928739 - 16928675
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||| | || ||||||||  ||||||  |||||||||||||||| |||||||    
T  16928739 acgttgcagatccgaaagcgtgggtatttcggtgacttaggttttatcatattatttgtaggcat 16928675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 20559726 - 20559670
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||||||||||||  ||||||  ||||||||||||||||    
T  20559726 acgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattattt 20559670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 20571288 - 20571232
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||||||||||||  ||||||  ||||||||||||||||    
T  20571288 acgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattattt 20571232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 25101877 - 25101921
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  25101877 aagtttaatccttacttaattttaatagattttttagtccctaca 25101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 6018414 - 6018371
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    |||||||| | |||||||||||||||||||||||| ||||||||    
T  6018414 taagtttagtccttacttaattttaataggttttttagtcccta 6018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 7883222 - 7883159
Alignment:
Q  8 cgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||| || |||| ||||||||  ||||||  |||||||||||||||| |||||||    
T  7883222 cgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcat 7883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16247203 - 16247149
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||| || |||| ||||||||| |||||| |||| ||||||||||||    
T  16247203 gttgcagatccggaagcatgggtatttcgctgacttagatttgatcatattattt 16247149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 41684499 - 41684553
Alignment:
Q  17 tccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||| |||| ||||||||  |||||| ||||||||||||||||| |||||||    
T  41684499 tccgaaagcatgggtatttcgatgacttagattttatcatattatttgtaggcat 41684553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 450
Target Start/End: Original strand, 42499294 - 42499328
Alignment:
Q  416 taagtttaattcttacttaattttaataggttttt 450  Q
    |||||||||| ||||||||||||||||||||||||    
T  42499294 taagtttaatccttacttaattttaataggttttt 42499328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 5046860 - 5046933
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    ||||||||||| |  |||||||| ||||||   |||||| | ||||||||||||||| ||||||| ||||||||    
T  5046860 acgttgcagattcataaacatgaatatttcagtgacttagaatttatcatattatttgtaggcattttatcgtt 5046933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 5695826 - 5695867
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    ||||||||||| ||||||||||||||||||| |||| |||||    
T  5695826 ttaagtttaatccttacttaattttaatagggtttttagtcc 5695867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 6590643 - 6590598
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  6590643 taagtttagtccttacttaattttaataggttttttagtccttaca 6590598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 21159762 - 21159803
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccc 457  Q
    |||||||| | |||||||||||||||||||||||| ||||||    
T  21159762 taagtttagtccttacttaattttaataggttttttagtccc 21159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 6219974 - 6219946
Alignment:
Q  7 acgttgcagatccgaaaacatgagtattt 35  Q
    |||||||||||||||||||||||||||||    
T  6219974 acgttgcagatccgaaaacatgagtattt 6219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 6413642 - 6413598
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| |||||||||||||||||||| ||||| | ||||||    
T  6413642 ttaagtttatttcttacttaattttaatagtttttttaatcccta 6413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 7677265 - 7677209
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || ||||| |||||||  ||||||  ||||||||||||||||    
T  7677265 acgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattattt 7677209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 455
Target Start/End: Original strand, 12469345 - 12469385
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtc 455  Q
    ||||||||||||||||||| |||||||||| ||||| ||||    
T  12469345 ttaagtttaattcttacttgattttaatagtttttttagtc 12469385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 31013590 - 31013526
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| || || |||| |||||||   ||||||| |||||||||||||||| |||||||    
T  31013590 acgttgcagattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcat 31013526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 33347503 - 33347439
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||| ||||||||| |||| ||||||||  |||| | | ||||||||||||||| |||||||    
T  33347503 acgttgcggatccgaaagcatgggtatttcggtgactcagaatttatcatattatttgtaggcat 33347439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 34609943 - 34610007
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| ||| |||||||||||| ||  || |||  ||||||||||||||| ||||||||    
T  34609943 acgttgcagattcgagaacatgagtattccggtgatttaggttttatcatattattaataggcat 34610007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 40211284 - 40211228
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||| ||||||| || |||||||||||||  |||||  |||||||||||||||||    
T  40211284 acgttgtagatccggaagcatgagtatttcgttgacttggattttatcatattattt 40211228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 23799894 - 23799830
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||||||||||||||||   |||||| ||||||||||||||||| |||||||    
T  23799894 acgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtaggcat 23799830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10233174 - 10233238
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||||| |||||||    
T  10233174 acgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtaggcat 10233238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 26275803 - 26275739
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| ||||||||||||||||||   |||||| ||||||||||||||||| |||||||    
T  26275803 acgttgcagattcgaaaacatgagtatttcagtgacttatattttatcatattatttgtaggcat 26275739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 12050632 - 12050559
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||| || |||| || |||||    
T  12050632 acgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcattttgtcgtt 12050559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 52923101 - 52923028
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| ||||||||  ||||||| |||||||||||||||| ||||||| ||| ||||    
T  52923101 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttaccgtt 52923028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4711586 - 4711650
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  4711586 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcat 4711650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10108340 - 10108404
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||  |  ||||||||||||| |||||||| |||||||||||||||| |||||||    
T  10108340 acgttgcagatccagatgcatgagtatttcggcgacttaagttttatcatattatttgtaggcat 10108404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10229580 - 10229644
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||| ||| ||||| |||||||  ||||||| |||||||||||||||| |||||||    
T  10229580 acgttgcagatccaaaagcatgattatttcggtgacttaagttttatcatattatttgtaggcat 10229644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 21431717 - 21431781
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  21431717 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcat 21431781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 48650718 - 48650654
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||| ||||  ||||||||||||  ||||||| |||||||||||||||| |||||||    
T  48650718 acgttgcagatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtaggcat 48650654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 20464952 - 20464898
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||  |||| |||||||||||||  ||||||||||||||||||||||||    
T  20464952 gttgcagatttgaaagcatgagtatttcggtgacttaaattttatcatattattt 20464898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 38174282 - 38174236
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  38174282 ttaagtttaatccttacttaattttaataggttttttagtccataca 38174236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 53517699 - 53517745
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  53517699 ttaagtttaatccttatttaattttaataggttttttagtccctaca 53517745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 14525167 - 14525122
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||    
T  14525167 taagtttagtccttacttaattttaataggttttttagtccctaca 14525122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9998571 - 9998635
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||  || |||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  9998571 acgttgcagatccagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcat 9998635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 21533793 - 21533729
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||  |||||||||||||||| |||||||    
T  21533793 acgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcat 21533729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 40762516 - 40762560
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||    
T  40762516 ttaagtttagtccttacttaattttaataggttttttagtcccta 40762560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 45419703 - 45419746
Alignment:
Q  418 agtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||| | |||||||||||||||||||||||| ||||||||||    
T  45419703 agtttagtccttacttaattttaataggttttttagtccctaca 45419746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 29348651 - 29348609
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccct 458  Q
    |||||||| | |||||||||||||||||||||||| |||||||    
T  29348651 taagtttagtccttacttaattttaataggttttttagtccct 29348609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 43488574 - 43488512
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggc 69  Q
    |||||||||||||| || |||||||||||||  || |||  |||||||||||||||| |||||    
T  43488574 acgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggc 43488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Complemental strand, 32147973 - 32147944
Alignment:
Q  415 ttaagtttaattcttacttaattttaatag 444  Q
    ||||||||||||||||||||||||||||||    
T  32147973 ttaagtttaattcttacttaattttaatag 32147944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 46295433 - 46295388
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||| ||||| | ||||||||    
T  46295433 taagtttaatccttacttaattttaatagcttttttaatccctaca 46295388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 7448898 - 7448842
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||| ||||| || |||||||||||||  ||||||| ||| ||||||||||||    
T  7448898 acgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattattt 7448842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 7457040 - 7456984
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||| ||||| || |||||||||||||  ||||||| ||| ||||||||||||    
T  7457040 acgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattattt 7456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 19619818 - 19619881
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||| |||||||||  |||||| ||||||  |||||| ||||||||||||||||| |||||||    
T  19619818 acgttgtagatccgaag-catgagaatttcggtgacttagattttatcatattatttgtaggcat 19619881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 21313140 - 21313196
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||| ||| ||| |||| |||||||||||||  |||||| |||||||||||||||||    
T  21313140 acgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattattt 21313196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 458
Target Start/End: Complemental strand, 28260574 - 28260538
Alignment:
Q  422 taattcttacttaattttaataggtttttcagtccct 458  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28260574 taattcttacttaattttaatagtttttttagtccct 28260538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 35175508 - 35175572
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||||||||||||||  |  || ||| |||| |||||||| ||| |||||||    
T  35175508 acgttgcagatccgaaaacatgagtattctgatgatttatatttcatcatattgtttgtaggcat 35175572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 38545903 - 38545967
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||| ||||||||||||||| | |||| |  ||||||  |||||||||||||||| |||||||    
T  38545903 acgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtaggcat 38545967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 456
Target Start/End: Original strand, 44808755 - 44808795
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    |||||||| | |||||||||||||||||||||||| |||||    
T  44808755 taagtttagtccttacttaattttaataggttttttagtcc 44808795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 46220768 - 46220840
Alignment:
Q  8 cgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||||| |||  |||||||   || ||| ||||||||||||||||| ||||||| ||| ||||    
T  46220768 cgttgcagatccgaaagcattggtatttcagtgatttagattttatcatattatttgtaggcattttaccgtt 46220840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 54149095 - 54149159
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||  |||||||  |||||  ||||||||||||||||| |||||||    
T  54149095 acgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtaggcat 54149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37876591 - 37876527
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||| |||||||    
T  37876591 acgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggcat 37876527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 29279553 - 29279491
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||| |||||||||| |||||  |||||||||||||||||||||||| |||||||    
T  29279553 gttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtaggcat 29279491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 6458520 - 6458475
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6458520 taagtttaattcttacttaattttaataggttttttagtccctaca 6458475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 7646593 - 7646657
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||||||||||||  ||||||| |||||||||||||||| |||||||    
T  7646593 acgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcat 7646657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 36943106 - 36943042
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| ||||||| ||||||||  ||||| |||||||||||||||||| |||||||    
T  36943106 acgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtaggcat 36943042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4778868 - 4778932
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  4778868 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcat 4778932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 8737743 - 8737787
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctac 460  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  8737743 taagtttaatccttacttaattttaataggttttttagtccctac 8737787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 31128765 - 31128701
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||||||||||   |||||| ||||||||||||||||| |||||||    
T  31128765 acgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcat 31128701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 29173705 - 29173650
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatt 62  Q
    ||||||||||||||||| |||| ||||||||  |||||| ||||||||||||||||    
T  29173705 acgttgcagatccgaaagcatgggtatttcggtgacttagattttatcatattatt 29173650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 13371910 - 13371956
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  13371910 ttaagtttaatccttacttaattttaataggttttttagtccataca 13371956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 29809170 - 29809216
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctacag 462  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||    
T  29809170 taagtttaatccttacttaattttaataggttttttagtccatacag 29809216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 35498931 - 35498885
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||    
T  35498931 ttaagtttagtccttacttaattttaataggttttttagtccctaca 35498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 19062337 - 19062280
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattta 64  Q
    ||||| ||||||||||| |||| ||||||||  ||||||| |||||||||||||||||    
T  19062337 acgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattattta 19062280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 7448362 - 7448418
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || ||||||||||||   ||||||| ||||||||||||||||    
T  7448362 acgttgcagatccggaagcatgagtatttcagtgacttaagttttatcatattattt 7448418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 9169243 - 9169179
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||| | |||||||||||||| |||||||    
T  9169243 acgttgcagatccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggcat 9169179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10929780 - 10929844
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||  |  || |||||||||||||||||||||||||||||    
T  10929780 acgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggcat 10929844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 17994715 - 17994651
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||| ||||| || |||  ||||||||  |||||||||||||||||||||||| |||||||    
T  17994715 acgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtaggcat 17994651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 31788571 - 31788635
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||| ||||||||||||   ||||||  ||||| |||||||||| |||||||    
T  31788571 acgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcat 31788635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 38445281 - 38445345
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || | || ||||||||  ||||||| |||||||||||||||| |||||||    
T  38445281 acgttgcagatccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtaggcat 38445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 19176682 - 19176725
Alignment:
Q  413 tcttaagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    ||||||||||| || ||||||||||||||||||||||| |||||    
T  19176682 tcttaagtttagttattacttaattttaataggttttttagtcc 19176725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 31436417 - 31436374
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    |||||||||| ||||||||||||||||||||||||  |||||||    
T  31436417 taagtttaatccttacttaattttaataggttttttggtcccta 31436374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 41694769 - 41694812
Alignment:
Q  40 gacttaaattttatcatattatttataggcatattatcgttata 83  Q
    |||||| ||||||||||||||||||||||||| || ||||||||    
T  41694769 gacttagattttatcatattatttataggcattttgtcgttata 41694812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 14200879 - 14200925
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||||||    
T  14200879 ttaagtttagtccttacttaattttaatagcttttttagtccctaca 14200925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 18695187 - 18695233
Alignment:
Q  25 catgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||| ||||||| | |||| ||||||||||||||||||||||||||    
T  18695187 catgaatatttcgaccactttaattttatcatattatttataggcat 18695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 25666383 - 25666337
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| |||| ||||||||||||| ||||| ||||||||||    
T  25666383 ttaagtttaatccttatttaattttaatagattttttagtccctaca 25666337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 44286601 - 44286647
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||| ||||||||||||||||||| | ||||||||    
T  44286601 ttaagtttagttcttaattaattttaataggttttttaatccctaca 44286647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 1421791 - 1421864
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| ||||||||  || |||  |||||||||||||||| ||||||| || |||||    
T  1421791 acgttgcagatccggaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgtcgtt 1421864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 7439599 - 7439554
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||| ||||||||||| | ||||||||    
T  7439599 taagtttaatccttacttaatttaaataggttttttaatccctaca 7439554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 450
Target Start/End: Original strand, 30749468 - 30749501
Alignment:
Q  417 aagtttaattcttacttaattttaataggttttt 450  Q
    ||||||||| ||||||||||||||||||||||||    
T  30749468 aagtttaatccttacttaattttaataggttttt 30749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 33832040 - 33832085
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  33832040 taagtttagtccttacttaattttaataggttttttagtccataca 33832085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 41121118 - 41121073
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  41121118 taagtttagtccttacttaattttaataggttttttagtccttaca 41121073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 4041579 - 4041523
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    ||||||||||||||||| |||||||||||||   |||||   |||||||||||||||    
T  4041579 acgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatattattt 4041523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 4327977 - 4327933
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||||    
T  4327977 ttaagtttagtccttacttaattttaatagtttttttagtcccta 4327933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 7677858 - 7677794
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||| |||| |||||||   || |||  |||||||||||||||| |||||||    
T  7677858 acgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattatttttaggcat 7677794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 31210592 - 31210528
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||| |||| |||| ||||||||  || |||  |||||||||||||||| |||||||    
T  31210592 acgttgcagatcagaaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcat 31210528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 33585720 - 33585664
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||||||| ||||  || |||| ||||||||||||||||    
T  33585720 acgttgcagatccggaagcatgagtaattcggtgatttaagttttatcatattattt 33585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 34945497 - 34945570
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| ||||||||  ||||||| |||||||||||||||||||||||| || |||||    
T  34945497 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgtcgtt 34945570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 9687447 - 9687492
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||    
T  9687447 taagtttaatccttacttaattttaataggttttttagtccctaca 9687492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 37103410 - 37103365
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||    
T  37103410 taagtttaatccttacttaattttaataggttttttagtccctaca 37103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 6217002 - 6217066
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| || || |||| ||||||||  |||||||||||||||||||||||| |||||||    
T  6217002 acgttgcagattcggaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcat 6217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 13007333 - 13007397
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  13007333 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcat 13007397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 15571590 - 15571650
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttatag 67  Q
    |||||||||||||| || |||||||| |||   ||||||||||||||||||||||||||||    
T  15571590 acgttgcagatccggaagcatgagtagttcagtgacttaaattttatcatattatttatag 15571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 461
Target Start/End: Original strand, 41192898 - 41192937
Alignment:
Q  422 taattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  41192898 taattcttacttaattttaataggttttttagtccctaca 41192937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 4463138 - 4463096
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccct 458  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  4463138 taagtttagtccttacttaattttaataggtttttcagtccct 4463096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 7036323 - 7036384
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttatagg 68  Q
    ||||||||||||||||| |||| ||||||||  |||||| ||||||||||||| ||| ||||    
T  7036323 acgttgcagatccgaaagcatgggtatttcgaggacttagattttatcatattgtttgtagg 7036384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 10722865 - 10722929
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||| |||||| ||| |||| ||||||||  |||||| ||||||||||||||||| |||||||    
T  10722865 acgttgtagatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtaggcat 10722929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 11875491 - 11875562
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcg 78  Q
    |||||||||||  ||| ||||| ||||| |  | |||| |||||||||||||||||||||||||| ||||||    
T  11875491 acgttgcagatttgaagacatgggtattccagccacttcaattttatcatattatttataggcattttatcg 11875562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 450
Target Start/End: Original strand, 14049671 - 14049706
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggttttt 450  Q
    |||||||||||||||||||||||||||||| |||||    
T  14049671 ttaagtttaattcttacttaattttaatagtttttt 14049706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 2004327 - 2004281
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| | |||||||||||||||||||| ||| ||||||||||    
T  2004327 ttaagtttagtccttacttaattttaataggtgttttagtccctaca 2004281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 8404309 - 8404355
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| | |||||||||||||||||||||||| ||||| ||||    
T  8404309 ttaagtttagtccttacttaattttaataggttttttagtccttaca 8404355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 450
Target Start/End: Complemental strand, 9924612 - 9924578
Alignment:
Q  416 taagtttaattcttacttaattttaataggttttt 450  Q
    |||||||||| ||||||||||||||||||||||||    
T  9924612 taagtttaatccttacttaattttaataggttttt 9924578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 17523392 - 17523362
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcg 37  Q
    |||||||||||||||||||||||||||||||    
T  17523392 acgttgcagatccgaaaacatgagtatttcg 17523362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 14082380 - 14082307
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| |||||||   ||||||  |||||||||||||||| ||||||| || |||||    
T  14082380 acgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggcattttgtcgtt 14082307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 36876232 - 36876187
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| ||||||||||||||||||||  |||| ||||||||||    
T  36876232 taagtttagttcttacttaattttaatagcattttgagtccctaca 36876187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 1683536 - 1683492
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    |||||||||||||||||||||||| ||||| | ||| ||||||||    
T  1683536 ttaagtttaattcttacttaatttcaatagttcttttagtcccta 1683492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 9113709 - 9113645
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||   |||||||  ||||||| |||||||||||||||| |||||||    
T  9113709 acgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtaggcat 9113645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 11867753 - 11867817
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||| |||||||| |||||||    ||||| ||||||| ||||||||| |||||||    
T  11867753 acgttgcagatccaaaaacatgggtatttctgttacttagattttattatattatttgtaggcat 11867817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 26825534 - 26825598
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||  || ||||  |||||||  ||||||| |||||||||||||||| |||||||    
T  26825534 acgttgcagatccataagcatgtttatttcggtgacttaagttttatcatattatttgtaggcat 26825598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 38597901 - 38597965
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||||   ||||||  |||||||||||||||| |||||||    
T  38597901 acgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcat 38597965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 22611308 - 22611372
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||||||||||||  ||||||| |||||||||||||||| |||||||    
T  22611308 acgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcat 22611372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 53811153 - 53811217
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||||||||||||  ||||||| |||||||||||||||| |||||||    
T  53811153 acgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcat 53811217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 3872960 - 3873006
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3872960 ttaagtttaatccttacttaattttaataggttttttagtccctaca 3873006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 32766641 - 32766703
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||| |||||||    
T  32766641 gttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcat 32766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 45418637 - 45418710
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    ||||||||||||||||| ||  |||||||||  |||||| ||||||||||||||||| ||||||| || |||||    
T  45418637 acgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgtt 45418710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 4142736 - 4142680
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||  ||||||||||||||||  ||||||| ||||||||||||||||    
T  4142736 acgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattattt 4142680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 54021985 - 54022041
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    ||||||||||||||||||||||  |||||||  |||||| |||||||||||||||||    
T  54021985 acgttgcagatccgaaaacatggatatttcggtgacttagattttatcatattattt 54022041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 6589144 - 6589099
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||    
T  6589144 taagtttagtccttacttaattttaatagctttttcagtccctaca 6589099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 48257616 - 48257555
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttatagg 68  Q
    ||||| |||||||||||||||| ||||||||  ||||| | |||||||||||||||| ||||    
T  48257616 acgttacagatccgaaaacatgggtatttcggtgacttgagttttatcatattatttgtagg 48257555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 7617335 - 7617379
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  7617335 aagtttaatccttacttaattttaatagattttttagtccctaca 7617379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 19853496 - 19853432
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||  |||||||  ||||||| |||||||||||||||| |||||||    
T  19853496 acgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcat 19853432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 24099051 - 24098987
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| ||||||| |||||||   ||||||  |||||||||||||||| |||||||    
T  24099051 acgttgcagatccggaaacatgggtatttcagtgacttaggttttatcatattatttgtaggcat 24098987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 28448306 - 28448350
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctac 460  Q
    |||||||| | |||||||||||||||||||||||| |||||||||    
T  28448306 taagtttagtccttacttaattttaataggttttttagtccctac 28448350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 33921179 - 33921243
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||||   |||||| ||||||||||||||||| |||||||    
T  33921179 acgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcat 33921243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 36161836 - 36161900
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||| |||||||||||||||||||||||    || ||| ||||||||||||||||| |||||||    
T  36161836 acgttacagatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtaggcat 36161900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 43510323 - 43510394
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||  || |||| ||||||||  ||||||| |||||||||||||||| ||||||| || |||||    
T  43510323 gttgcagatcctgaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgtt 43510394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 3862404 - 3862449
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  3862404 ttaagtttaatccttacttaattttaata-gttttttagtccctaca 3862449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 3871161 - 3871206
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  3871161 ttaagtttaatccttacttaattttaata-gttttttagtccctaca 3871206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 461
Target Start/End: Original strand, 20177772 - 20177806
Alignment:
Q  427 cttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||||||||||||||||| ||||||||||    
T  20177772 cttacttaattttaataggttttttagtccctaca 20177806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 29120360 - 29120290
Alignment:
Q  10 ttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    ||||||||| | || |||||||||||||   ||||| ||||||||||||||||| ||||||| || |||||    
T  29120360 ttgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtaggcattttgtcgtt 29120290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 459
Target Start/End: Original strand, 35821049 - 35821091
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||    
T  35821049 aagtttaattcatacttaattttaatagtttttttagtcccta 35821091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 22068477 - 22068432
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||| ||||| ||||||||||    
T  22068477 taagtttagtccttacttaattttaatagattttttagtccctaca 22068432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 450
Target Start/End: Original strand, 38114154 - 38114187
Alignment:
Q  417 aagtttaattcttacttaattttaataggttttt 450  Q
    ||||||||| ||||||||||||||||||||||||    
T  38114154 aagtttaatccttacttaattttaataggttttt 38114187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 51395529 - 51395574
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | ||||||||||||||||| |||||| ||||||||||    
T  51395529 taagtttagtccttacttaattttaataagttttttagtccctaca 51395574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 56040630 - 56040557
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||  || |||| ||||||||  ||||||  |||||||||||||||| ||||||| || |||||    
T  56040630 acgttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgtt 56040557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 2520904 - 2520968
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| ||||||||  || ||| |||||||| |||||||| |||||||    
T  2520904 acgttgcagatccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcat 2520968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9048789 - 9048853
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||| ||| ||||||||| |||||  |  || ||||||||||||||||||||| |||||||    
T  9048789 acgttgcaaatctgaaaacatgggtattctgatgatttaaattttatcatattatttgtaggcat 9048853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 10085408 - 10085452
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||||    
T  10085408 ttaagtttagtccttacttaattttaatagtttttttagtcccta 10085452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 21662562 - 21662618
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||| ||||||||  ||||||  ||||||||||||||||    
T  21662562 acgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattattt 21662618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 21671326 - 21671382
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    |||||||||||||| || |||| ||||||||  ||||||  ||||||||||||||||    
T  21671326 acgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattattt 21671382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 21686226 - 21686162
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||||||||| |  || |||  |||||||||||||||| |||||||    
T  21686226 acgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcat 21686162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 33177338 - 33177382
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| | |||||||||||||||| ||||| ||||||||||    
T  33177338 aagtttaatccatacttaattttaatagattttttagtccctaca 33177382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 47309812 - 47309768
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||||||||||||||  ||||| ||||||||||    
T  47309812 aagtttaatccttacttaattttaatatattttttagtccctaca 47309768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 47379094 - 47379138
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctac 460  Q
    |||||||| | |||||||||||||||||| ||||| |||||||||    
T  47379094 taagtttagtccttacttaattttaatagtttttttagtccctac 47379138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 32395106 - 32395170
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||| ||||| |||| ||||||||  ||||||| ||||||||||||||||||||||||    
T  32395106 acgttgcagattcgaaagcatgggtatttcggtgacttaagttttatcatattatttataggcat 32395170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 21947602 - 21947538
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||| |||||||  ||||||| |||||||||||||||| |||||||    
T  21947602 acgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcat 21947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 27580109 - 27580048
Alignment:
Q  10 ttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||| ||||| |||||||||||||  |||||| |||||||||||||||| ||| ||||    
T  27580109 ttgcagattcgaaagcatgagtatttcggtgacttagattttatcatattattcataagcat 27580048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 33707284 - 33707325
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  33707284 ttaagtttaatccttacttaattttaatagttttttcagtcc 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 35462033 - 35461972
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttatagg 68  Q
    |||||||||||||| || |||| ||||||||  ||||||| ||||||||||||||| |||||    
T  35462033 acgttgcagatccggaagcatgtgtatttcggtgacttaagttttatcatattattaatagg 35461972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 47008592 - 47008637
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||    
T  47008592 taagttcaatccttacttaattttaataggttttttagtccctaca 47008637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4413222 - 4413286
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||| |||||||  ||||||  |||||||||||||||| |||||||    
T  4413222 acgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcat 4413286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 458
Target Start/End: Complemental strand, 28701296 - 28701253
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccct 458  Q
    ||||||||| | |||||||||||||||||||||||| |||||||    
T  28701296 ttaagtttagtccttacttaattttaataggttttttagtccct 28701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 43505147 - 43505101
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| || |||||||||||||||||||||||| |||| |||||    
T  43505147 ttaagtttgatccttacttaattttaataggttttttagtctctaca 43505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 44915749 - 44915811
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||| || |||||||||||||    |||| ||||||||||||||||| |||||||    
T  44915749 gttgcagatccggaagcatgagtatttcggtttcttagattttatcatattatttgtaggcat 44915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 2059725 - 2059680
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||    
T  2059725 taagtttaatctttacttaattttaataggatttttagtccctaca 2059680  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 5430479 - 5430520
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    |||||||||||||||||||||||||||||  ||||| |||||    
T  5430479 ttaagtttaattcttacttaattttaataatttttttagtcc 5430520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 5983948 - 5984017
Alignment:
Q  11 tgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||| || |||| ||||||||  ||||||  |||||||||||||||| ||||||| || |||||    
T  5983948 tgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcgtt 5984017  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 12896867 - 12896896
Alignment:
Q  415 ttaagtttaattcttacttaattttaatag 444  Q
    ||||||||||||||||||||||||||||||    
T  12896867 ttaagtttaattcttacttaattttaatag 12896896  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 13144793 - 13144732
Alignment:
Q  10 ttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||| |||| ||||||||||||   |||||| ||||||||||| ||||| |||||||    
T  13144793 ttgcagatctgaaagcatgagtatttcagtgacttagattttatcataatatttgtaggcat 13144732  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 21794712 - 21794667
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  21794712 taagtttagtccttacttaattttaataggtttttaagtccttaca 21794667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 28480054 - 28480009
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||||||| ||||||||||||| ||||| ||| ||||||    
T  28480054 taagtttaattcttatttaattttaatagcttttttagttcctaca 28480009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 46517087 - 46517132
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||| | ||| ||||||||||    
T  46517087 taagtttaatccttacttaattttaatagatattttagtccctaca 46517132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 3228377 - 3228441
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||| ||||  |||||||  || |||  |||||||||||||||| |||||||    
T  3228377 acgttgcagatccgaaatcatggatatttcgatgatttaggttttatcatattatttgtaggcat 3228441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 11462457 - 11462405
Alignment:
Q  16 atccgaaaacatgagtatttcgccgacttaaattttatcatattatttatagg 68  Q
    ||||| ||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  11462457 atccggaaacatgggtatttcggtgacttaagttttatcatattatttgtagg 11462405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 14872747 - 14872811
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||| |  ||||||  |||||||||||||||| |||||||    
T  14872747 acgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggcat 14872811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 20357310 - 20357270
Alignment:
Q  419 gtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||| |||||||||||||||||||| ||||| ||||||||    
T  20357310 gtttatttcttacttaattttaatagtttttttagtcccta 20357270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 20562645 - 20562685
Alignment:
Q  419 gtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||| |||||||||||||||||||| ||||| ||||||||    
T  20562645 gtttatttcttacttaattttaatagtttttttagtcccta 20562685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 30742701 - 30742661
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtcc 456  Q
    |||||||||| |||||||||||||||||| ||||| |||||    
T  30742701 taagtttaatccttacttaattttaatagttttttaagtcc 30742661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 45415666 - 45415730
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||  ||||||||  ||||||  |||||||||||||||| |||||||    
T  45415666 acgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcat 45415730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 48410524 - 48410480
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtcccta 459  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||||    
T  48410524 ttaagtttagtccttacttaattttaatagcttttttagtcccta 48410480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 31256 - 31185
Alignment:
Q  9 gttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||| || |||| ||||||||  |||||| ||||||||||||||||||||||||| || |||||    
T  31256 gttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttataggcattttgtcgtt 31185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 3779 - 3825
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3779 ttaagtttaatccttacttaattttaataggttttttagtccctaca 3825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 1803 - 1730
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| ||||||||  |||||| ||||||||||||||||| ||||||| ||| ||||    
T  1803 acgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcattttaccgtt 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 1957 - 1893
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    ||||||||||||||||||||| |||||||||  || |||  |||||||||||||||| |||||||    
T  1957 acgttgcagatccgaaaacataagtatttcggtgatttaggttttatcatattatttgtaggcat 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 32731 - 32667
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||| | || |||||||||||||  |||||| ||||||||||||||||| |||||||    
T  32731 acgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcat 32667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 66026 - 65953
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcatattatcgtt 80  Q
    |||||||||||||| || |||| ||||||||  ||||||  |||||||||||||||| ||||||| || |||||    
T  66026 acgttgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcgtt 65953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 17293 - 17338
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||    
T  17293 taagtttaatccttacttaattttaatagtttttttagtccctaca 17338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 5834 - 5878
Alignment:
Q  417 aagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  5834 aagtttaatccttacttaattttaatagattttttagtccctaca 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 50881 - 50945
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || ||||  |||||||  ||||||| |||||||||||||||| |||||||    
T  50881 acgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggcat 50945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 8831 - 8786
Alignment:
Q  415 ttaagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  8831 ttaagtttaatccttacttaattttaata-gttttttagtccctaca 8786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 118 - 163
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  118 taagtttagtccttacttaattttaataggttttttagtccttaca 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 461
Target Start/End: Original strand, 6097 - 6142
Alignment:
Q  416 taagtttaattcttacttaattttaataggtttttcagtccctaca 461  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||    
T  6097 taagtttagtccttacttaattttaataggttttttagtccttaca 6142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 14851 - 14799
Alignment:
Q  10 ttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    ||||||||||| ||||||||||||||||  |||||| | |||||||||||||||    
T  14851 ttgcagatccggaaacatgagtatttcgatgacttaga-tttatcatattattt 14799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 1622 - 1586
Alignment:
Q  47 attttatcatattatttataggcatattatcgttata 83  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  1622 attttatcatattatttgtaggcattttatcgttata 1586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 71284 - 71220
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattatttataggcat 71  Q
    |||||||||||||| || |||| |||||| |  |||||| ||||||| ||||||||| |||||||    
T  71284 acgttgcagatccggaagcatgggtattttgatgacttagattttattatattatttgtaggcat 71220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4277 - 4333
Alignment:
Q  7 acgttgcagatccgaaaacatgagtatttcgccgacttaaattttatcatattattt 63  Q
    ||||||||||||||||| | ||||||||| |  || ||| |||||||||||||||||    
T  4277 acgttgcagatccgaaagcttgagtattttgatgatttagattttatcatattattt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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