View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4924-Insertion-9 (Length: 234)
Name: NF4924-Insertion-9
Description: NF4924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4924-Insertion-9 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 31696060 - 31695840
Alignment:
| Q |
5 |
acaattattagatgacgaaatacgtggtttaatattaccgaatagtctgtagtattttttgcaactatagtcaatgacttcgatgtcatggtgtctgacc |
104 |
Q |
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| T |
31696060 |
acaattattagatgaagaaatacatagtttaatattaccgaatagtctgtagtattttttgcaactatagtcaatgacttcgatgtcatagtgtcttacc |
31695961 |
T |
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| Q |
105 |
cggcactttgattgtcaacaacttgactcaacttggttcaatattcaggttgatctttgtatatgctacaaaactttaatatcaaaataaagattattac |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
31695960 |
cggcactttgattgtcaacaacttgactcaacttggttcaatattcggattgatctttgcatatgctacaaaactttaatatcaaaataaagattattac |
31695861 |
T |
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| Q |
205 |
actaaattaagtatggaatat |
225 |
Q |
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|||||||||||||||||||| |
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| T |
31695860 |
cctaaattaagtatggaatat |
31695840 |
T |
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