View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4924_high_1 (Length: 381)

Name: NF4924_high_1
Description: NF4924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4924_high_1
NF4924_high_1
[»] chr4 (27 HSPs)
chr4 (256-370)||(29691525-29691639)
chr4 (257-367)||(3296544-3296654)
chr4 (256-367)||(48553896-48554007)
chr4 (249-367)||(30608612-30608730)
chr4 (256-373)||(51906792-51906909)
chr4 (256-367)||(7118143-7118254)
chr4 (257-367)||(34129279-34129389)
chr4 (256-373)||(35166839-35166956)
chr4 (281-373)||(30608270-30608362)
chr4 (251-367)||(51906415-51906531)
chr4 (256-367)||(3296923-3297034)
chr4 (256-355)||(54143492-54143591)
chr4 (256-355)||(54167494-54167593)
chr4 (267-373)||(26168004-26168109)
chr4 (256-358)||(38759704-38759806)
chr4 (256-364)||(48760097-48760205)
chr4 (260-367)||(56106440-56106547)
chr4 (256-346)||(54168823-54168913)
chr4 (254-355)||(54142323-54142424)
chr4 (256-372)||(47058481-47058597)
chr4 (316-373)||(1791521-1791578)
chr4 (264-357)||(26984152-26984245)
chr4 (256-373)||(28505209-28505325)
chr4 (251-355)||(789890-789993)
chr4 (251-303)||(3296814-3296866)
chr4 (256-368)||(34128994-34129106)
chr4 (256-372)||(47053761-47053877)
[»] chr8 (18 HSPs)
chr8 (20-85)||(44000495-44000560)
chr8 (256-373)||(9800039-9800156)
chr8 (256-373)||(26997842-26997959)
chr8 (256-367)||(17914197-17914308)
chr8 (256-365)||(13315202-13315311)
chr8 (256-367)||(10047479-10047589)
chr8 (263-367)||(6297841-6297945)
chr8 (256-364)||(7344838-7344946)
chr8 (259-363)||(26243378-26243482)
chr8 (257-367)||(6297463-6297573)
chr8 (256-373)||(17915480-17915596)
chr8 (256-347)||(4624533-4624624)
chr8 (254-356)||(12489517-12489618)
chr8 (257-367)||(44148578-44148688)
chr8 (316-363)||(21006105-21006152)
chr8 (256-355)||(29917529-29917627)
chr8 (261-367)||(44024230-44024336)
chr8 (249-285)||(4694493-4694529)
[»] scaffold0009 (1 HSPs)
scaffold0009 (249-373)||(108095-108219)
[»] chr5 (24 HSPs)
chr5 (257-368)||(87239-87350)
chr5 (257-367)||(16284275-16284385)
chr5 (256-364)||(18999622-18999730)
chr5 (256-367)||(18999366-18999477)
chr5 (254-368)||(8648043-8648157)
chr5 (256-367)||(31176507-31176618)
chr5 (257-367)||(8750339-8750449)
chr5 (256-373)||(31588319-31588437)
chr5 (258-373)||(13987284-13987400)
chr5 (256-336)||(22231170-22231250)
chr5 (256-369)||(14625122-14625234)
chr5 (256-367)||(3406839-3406949)
chr5 (256-373)||(3191798-3191914)
chr5 (256-336)||(119184-119264)
chr5 (316-371)||(3935450-3935505)
chr5 (250-361)||(14626074-14626185)
chr5 (244-370)||(8749998-8750124)
chr5 (256-286)||(15978389-15978419)
chr5 (251-332)||(18339314-18339395)
chr5 (256-344)||(87019-87107)
chr5 (297-373)||(3935667-3935743)
chr5 (253-281)||(29959175-29959203)
chr5 (321-365)||(30415465-30415509)
chr5 (245-281)||(34448483-34448519)
[»] chr1 (23 HSPs)
chr1 (256-367)||(18180257-18180368)
chr1 (256-373)||(31436356-31436473)
chr1 (256-370)||(18179879-18179993)
chr1 (256-367)||(9880484-9880595)
chr1 (256-373)||(3591310-3591427)
chr1 (256-373)||(5683534-5683651)
chr1 (256-373)||(50359412-50359529)
chr1 (254-374)||(48154972-48155091)
chr1 (256-366)||(42723235-42723349)
chr1 (256-368)||(19895400-19895512)
chr1 (251-373)||(9880763-9880885)
chr1 (256-373)||(6751326-6751444)
chr1 (249-346)||(1500981-1501078)
chr1 (256-373)||(5683161-5683278)
chr1 (256-365)||(50359125-50359234)
chr1 (256-355)||(36792240-36792338)
chr1 (256-355)||(36793565-36793664)
chr1 (256-370)||(45664687-45664801)
chr1 (254-364)||(4288422-4288527)
chr1 (258-367)||(6751049-6751158)
chr1 (319-367)||(47541803-47541851)
chr1 (256-287)||(47542078-47542109)
chr1 (265-345)||(47541527-47541607)
[»] chr2 (24 HSPs)
chr2 (251-368)||(2517408-2517525)
chr2 (255-367)||(2191216-2191328)
chr2 (256-368)||(39729584-39729696)
chr2 (256-367)||(3691368-3691479)
chr2 (256-361)||(18107410-18107515)
chr2 (256-372)||(21217295-21217411)
chr2 (256-372)||(21264991-21265107)
chr2 (256-371)||(21182307-21182422)
chr2 (267-372)||(3691094-3691199)
chr2 (258-367)||(24093535-24093644)
chr2 (256-355)||(2035608-2035707)
chr2 (256-367)||(21216923-21217034)
chr2 (256-367)||(21265368-21265479)
chr2 (256-365)||(32860814-32860923)
chr2 (256-367)||(24093156-24093267)
chr2 (256-373)||(39096930-39097046)
chr2 (256-355)||(10709475-10709574)
chr2 (256-367)||(32114450-32114561)
chr2 (256-355)||(39096524-39096622)
chr2 (258-332)||(2191392-2191466)
chr2 (257-303)||(7083792-7083838)
chr2 (259-356)||(7083525-7083622)
chr2 (251-307)||(7083690-7083746)
chr2 (317-373)||(10706624-10706680)
[»] scaffold0063 (2 HSPs)
scaffold0063 (258-373)||(34794-34909)
scaffold0063 (257-366)||(35172-35281)
[»] chr6 (9 HSPs)
chr6 (256-367)||(5974011-5974122)
chr6 (256-345)||(8710341-8710430)
chr6 (256-364)||(1869451-1869559)
chr6 (258-372)||(25932359-25932476)
chr6 (256-345)||(211441-211530)
chr6 (317-373)||(21113090-21113146)
chr6 (251-365)||(4510183-4510298)
chr6 (257-373)||(14712979-14713095)
chr6 (256-336)||(19595659-19595739)
[»] chr3 (20 HSPs)
chr3 (251-364)||(44504368-44504481)
chr3 (256-373)||(22814296-22814413)
chr3 (256-371)||(51471335-51471450)
chr3 (251-371)||(9218489-9218608)
chr3 (249-364)||(25770314-25770429)
chr3 (253-367)||(13637759-13637873)
chr3 (259-367)||(37172084-37172192)
chr3 (258-373)||(38485699-38485813)
chr3 (256-367)||(43933440-43933551)
chr3 (249-373)||(4199446-4199569)
chr3 (316-368)||(27013469-27013521)
chr3 (256-372)||(34743444-34743560)
chr3 (256-343)||(132062-132149)
chr3 (264-367)||(44504100-44504203)
chr3 (255-373)||(50732224-50732342)
chr3 (255-373)||(50780513-50780631)
chr3 (248-286)||(22814641-22814679)
chr3 (256-372)||(20831075-20831191)
chr3 (254-282)||(50002057-50002085)
chr3 (317-357)||(51755903-51755943)
[»] chr7 (19 HSPs)
chr7 (256-364)||(28854677-28854785)
chr7 (253-348)||(30938592-30938687)
chr7 (256-365)||(18152756-18152865)
chr7 (258-367)||(20544290-20544398)
chr7 (250-366)||(10466759-10466875)
chr7 (256-367)||(17075219-17075330)
chr7 (256-371)||(28852693-28852808)
chr7 (264-370)||(22948854-22948960)
chr7 (257-367)||(44803611-44803721)
chr7 (251-335)||(28838520-28838604)
chr7 (256-367)||(17075596-17075707)
chr7 (251-360)||(16755619-16755727)
chr7 (317-370)||(32092505-32092558)
chr7 (256-368)||(32092228-32092340)
chr7 (316-371)||(11975038-11975093)
chr7 (317-367)||(28838413-28838463)
chr7 (256-373)||(20543911-20544028)
chr7 (256-372)||(4152720-4152836)
chr7 (256-287)||(23548054-23548085)
[»] scaffold0148 (2 HSPs)
scaffold0148 (256-372)||(32968-33084)
scaffold0148 (256-372)||(29274-29390)


Alignment Details
Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 29691525 - 29691639
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| |||||||||    
T  29691525 ggttaaatatgtttttagtccttatattttgcatccatttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgtta 29691624  T
Q  356 tcataattagtctct 370  Q
    ||| |||||||||||    
T  29691625 tcaaaattagtctct 29691639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 3296544 - 3296654
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| ||||||||||    
T  3296544 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatattccctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 3296643  T
Q  357 cataattagtc 367  Q
    || ||||||||    
T  3296644 caaaattagtc 3296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 48553896 - 48554007
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||| |||||||||||||| ||||||| ||  ||| ||||||| |||||| |||  ||||||  || ||||||||| |||||||| |||||||||    
T  48553896 ggttaaatacgtttttagtccttacattttgcgtccctttgaagaatagtccatacatttcattaaacctttttaaaatcctcacattttatctccgtta 48553995  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  48553996 tcaaaattagtc 48554007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 30608730 - 30608612
Alignment:
Q  249 aatttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttc 348  Q
    |||||| |||||||||||||||||| ||||| ||||||   |  ||| ||||||| ||  ||||||  |||||||||| ||||||||| |||||||| ||    
T  30608730 aatttagggttaaatatgtttttagaccttacattttgtgcctctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatc 30608631  T
Q  349 tccgttatcataattagtc 367  Q
    |||||||||| ||||||||    
T  30608630 tccgttatcaaaattagtc 30608612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 51906909 - 51906792
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||     ||| ||||||| ||| || ||   |||||||||| ||||||||| |||||||| |||||||||    
T  51906909 ggttaaatatgtttttagtccttacattttgcgctcctttgaagaatagtccctacatctcattaaatgtttttaaaatcctcacattttatctccgtta 51906810  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||| ||||||    
T  51906809 tcaaaattagtttctgct 51906792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 7118254 - 7118143
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||| |||||| |||  |||||||||| ||||||| | || ||||| ||||| |||    
T  7118254 ggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaattctcaaattttatctccatta 7118155  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  7118154 tcaaaattagtc 7118143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 367
Target Start/End: Complemental strand, 34129389 - 34129279
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    |||||||||||||| || ||||| |||||||| || ||| ||||||| ||| || |||  ||||||| || ||||||||| |||||||| |||| |||||    
T  34129389 gttaaatatgttttcagcccttacattttgcaccaatttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatctctgttat 34129290  T
Q  357 cataattagtc 367  Q
    || ||||||||    
T  34129289 caaaattagtc 34129279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 35166956 - 35166839
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||| |||||| |||| ||||||| ||  ||  || ||||||||    |||  |||||||||| ||||||||| |||||||| |||||||||    
T  35166956 ggttaaatatgtctttagtgcttacattttgcgtcccttcgaaaaataatcccagcatttcattaaatgtttttaaaatcctcacattttatctccgtta 35166857  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||||||||||    
T  35166856 tcaaaattagtctctgct 35166839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 373
Target Start/End: Original strand, 30608270 - 30608362
Alignment:
Q  281 attttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataattagtctctgct 373  Q
    ||||||| ||||||| ||||||| ||| || |||  |||| || || ||||||||| |||||||| |||||||||||| ||||||||||||||    
T  30608270 attttgcgtcattttgaagaatagtccctacatttcattatatatttttaaaatcctcacattttatctccgttatcaaaattagtctctgct 30608362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 367
Target Start/End: Original strand, 51906415 - 51906531
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctc 350  Q
    |||| |||||||||||||||||||| ||| |||||||  |  ||| ||||||| ||| ||  ||  |||||||||| |||| |||| |||||||| ||||    
T  51906415 tttagggttaaatatgtttttagtctttacattttgcgcctctttgaagaatagtccctacgtttcattaaatgtttttaatatcctcacattttatctc 51906514  T
Q  351 cgttatcataattagtc 367  Q
    |||||||| ||||||||    
T  51906515 cgttatcaaaattagtc 51906531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 3297034 - 3296923
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| |||||||  |  ||| ||||||| ||| ||  ||  |||||||||| |||||||||  ||||||| |||||||||    
T  3297034 ggttaaatatatttttagtccttacattttgcgaccctttgaagaatagtccctacgtttcattaaatgtttttaaaatccttacattttatctccgtta 3296935  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  3296934 tcaaaattagtc 3296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 54143591 - 54143492
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||| ||||||| |||||||||||  | ||| ||||||| ||| || ||| || |||||||| |||||||||  ||||||| |||||||||    
T  54143591 ggttaaatatgttattagtccctatattttgcacgactttgaagaatagtccctacattttaataaatgtttttaaaatccttacattttctctccgtta 54143492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 54167494 - 54167593
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||| ||||| || ||||||| | ||||| ||||||| ||| ||||||  | |||||||| |||||||||  |||||||| ||||||||    
T  54167494 ggttaaatatgttttaagtccctacattttgcgtgattttcaagaatagtccttatatttcaataaatgtttttaaaatccctacatttttactccgtta 54167593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 373
Target Start/End: Original strand, 26168004 - 26168109
Alignment:
Q  267 tttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataattagt 366  Q
    ||||||||| ||| |||||||  | |||||||||||| |   || ||| |||||||| || ||||||||| |||||||| |||||||||||| |||||||    
T  26168004 tttttagtcattacattttgcgcccttttaaagaatagtttctacatt-tattaaatatttttaaaatcctcacattttatctccgttatcaaaattagt 26168102  T
Q  367 ctctgct 373  Q
    |||||||    
T  26168103 ctctgct 26168109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 358
Target Start/End: Original strand, 38759704 - 38759806
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| |||||||  |  ||| ||||||| || ||| |||  |||||||||| ||||||||| || ||||| |||||||||    
T  38759704 ggttaaatatttttttagtccttaaattttgcgcctctttgaagaatagtctatacatttcattaaatgtttttaaaatcctcaaattttatctccgtta 38759803  T
Q  356 tca 358  Q
    |||    
T  38759804 tca 38759806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 48760205 - 48760097
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||| |||||||| ||| || |||| ||||||| | | || | |  |||||||||| ||||||||  |||||||| |||| ||||    
T  48760205 ggttaaatatgtttttagttcttatattgtgcgtctttttgaagaatagttcgtacaattcattaaatgtttttaaaatcttcacattttatctctgtta 48760106  T
Q  356 tcataatta 364  Q
    ||| |||||    
T  48760105 tcaaaatta 48760097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 367
Target Start/End: Complemental strand, 56106547 - 56106440
Alignment:
Q  260 aaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcat 359  Q
    |||||||||||||||| ||| ||||||   |  ||| ||||||| | | |||||| ||||||||||| ||||||||| | |||||| |||||||||| |     
T  56106547 aaatatgtttttagtctttacattttgtgcccctttgaagaatagttcctatattttattaaatgtttttaaaatcctctcattttatctccgttattaa 56106448  T
Q  360 aattagtc 367  Q
    ||||||||    
T  56106447 aattagtc 56106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 54168913 - 54168823
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttt 346  Q
    ||||||||||||||||| ||| |||||||||| | | ||| ||||||||||| || ||| || ||||| || |||||||||  ||||||||    
T  54168913 ggttaaatatgtttttaatccctatattttgcgtgactttgaagaataatccctacattttaataaatatttttaaaatccctacattttt 54168823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 54142323 - 54142424
Alignment:
Q  254 atggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    ||||||||||||||| ||||||| || |||||||   | ||| ||||||| |||||| |||  | |||||||| |||||||||  ||||||| |||||||    
T  54142323 atggttaaatatgttattagtccctacattttgcgcgactttgaagaatagtccatacatttcaataaatgtttttaaaatccttacattttctctccgt 54142422  T
Q  354 ta 355  Q
    ||    
T  54142423 ta 54142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 47058597 - 47058481
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || ||||||| |||||||||  |||| ||  || |||  | |||||||| |||||||||  ||||||||| |||||||    
T  47058597 ggttaaatatgtttttggtccctacattttgcctcattttaattaatagtctttacatttcaataaatgtttttaaaatccctacattttttatccgtta 47058498  T
Q  356 tcataattagtctctgc 372  Q
     || || ||||| ||||    
T  47058497 gcacaaatagtccctgc 47058481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 1791578 - 1791521
Alignment:
Q  316 tattaaatgttcttaaaatccacacattttttctccgttatcataattagtctctgct 373  Q
    ||||||||||| ||||||||   ||||||| |||||||||| | ||||||||||||||    
T  1791578 tattaaatgtttttaaaatctttacattttatctccgttattaaaattagtctctgct 1791521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 357
Target Start/End: Original strand, 26984152 - 26984245
Alignment:
Q  264 atgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    |||||||||||  |||||||||||  |  ||| ||||||| ||| || | | ||||||||||| ||||||||| |||||||| |||| ||||||    
T  26984152 atgtttttagtttttatattttgcgcctctttgaagaatagtccctagactttattaaatgtttttaaaatcctcacattttatctcagttatc 26984245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 28505209 - 28505325
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || ||||||||  |||||  |||||| ||| || |||  | |||||||| |||||||||  |||||||| ||||||||    
T  28505209 ggttaaatatgtttttggtccctacattttgcacgatttt-gagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgtta 28505307  T
Q  356 tcataattagtctctgct 373  Q
     | ||| ||||| |||||    
T  28505308 gcgtaaatagtccctgct 28505325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 355
Target Start/End: Original strand, 789890 - 789993
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctc 350  Q
    |||| |||||||||||||||| |||| || |||||||   ||||| || |||| |||||| |||  | | |||||| |||||||||  ||||||||||||    
T  789890 tttagggttaaatatgtttttggtccctacattttgcgcaattttgaa-aatagtccatacatttcaatgaatgtttttaaaatccctacattttttctc 789988  T
Q  351 cgtta 355  Q
    |||||    
T  789989 cgtta 789993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 3296866 - 3296814
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaata 303  Q
    |||| |||||||||||||||| |||| |||||||||| | | |||||||||||    
T  3296866 tttaaggttaaatatgtttttggtccatatattttgcgtgactttaaagaata 3296814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 34128994 - 34129106
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||| || |  ||| ||||||| ||  ||| ||||||| ||| |||||| ||||||| ||| ||||||| | || ||||| ||| |||||    
T  34128994 ggttaaatatgtttctaataattacattttgcgtccctttgaagaatagtccctatattttattaaacgtttttaaaattctcatattttatcttcgtta 34129093  T
Q  356 tcataattagtct 368  Q
    ||| | |||||||    
T  34129094 tcaaagttagtct 34129106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 47053761 - 47053877
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||| || |||| || ||||||| |||||||||  |||| ||| || |||  | |||||||| |||||||||  ||||||||  |||||||    
T  47053761 ggttaaatatgttattggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgtta 47053860  T
Q  356 tcataattagtctctgc 372  Q
     || || ||||| ||||    
T  47053861 gcacaaatagtccctgc 47053877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 44000495 - 44000560
Alignment:
Q  20 aagggcaaagtaatattactcacaaagacataaatgtaatttgctaaatatatccatttttcttaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44000495 aagggcaaagtaatattactcacaaagacataaatgtaatttgctaaatatatccatttttcttaa 44000560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 9800039 - 9800156
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||||||| || ||| ||||||||||| ||||||||| |||||||  |||||||||    
T  9800039 ggttaaatatgtttttagtccttagattttgcgcctctttgaagaataatccttacattttattaaatgtttttaaaatcctcacatttcatctccgtta 9800138  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||||| ||||    
T  9800139 tcaaaattagtctttgct 9800156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 26997959 - 26997842
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||| |||| ||||||| ||  ||| ||||||| |||||| |||  ||||| | || ||||||||| |||||||| |||||||||    
T  26997959 ggttaaatatgtttttagttcttacattttgcgtccatttgaagaatagtccatacatttcattaattatttttaaaatcctcacattttatctccgtta 26997860  T
Q  356 tcataattagtctctgct 373  Q
    ||| |||||||| |||||    
T  26997859 tcaaaattagtccctgct 26997842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 17914197 - 17914308
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||| |||| ||| ||||||| ||  ||| ||||||| ||| || ||| ||||||||||| ||||||||| |||||||| |||| ||||    
T  17914197 ggttaaatatgttttaagtctttacattttgcgtctctttgaagaatagtccctacattttattaaatgtttttaaaatcctcacattttatctctgtta 17914296  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  17914297 tcaaaattagtc 17914308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 13315202 - 13315311
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||||||||||| ||| || |||  |||||||||| ||||||||  |||||||| |||| ||||    
T  13315202 ggttaaatatgtttttagtccttacattttgcgcccatttaaagaatagtccctacatttcattaaatgtttttaaaatcatcacattttatctctgtta 13315301  T
Q  356 tcataattag 365  Q
    ||| ||||||    
T  13315302 tcaaaattag 13315311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 10047479 - 10047589
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| |||||| |||||||  | |||| ||||||| ||| || |||  |||||||||| ||||||| | |||||||| |||||||||    
T  10047479 ggttaaatatgtttttaatccttacattttgcgcccttttgaagaatagtccctacattc-attaaatgtttttaaaattctcacattttatctccgtta 10047577  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  10047578 tcaaaattagtc 10047589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 367
Target Start/End: Complemental strand, 6297945 - 6297841
Alignment:
Q  263 tatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataat 362  Q
    ||||||||| |||| || ||||||| | | ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| |||||||||||| |||    
T  6297945 tatgtttttcgtccctacattttgcgtgactttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaat 6297846  T
Q  363 tagtc 367  Q
    |||||    
T  6297845 tagtc 6297841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 7344946 - 7344838
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||| |||||||||||||||||| ||||||   |  ||| |||||||||||||| ||| ||||| ||||| ||||||||| || ||||| | |||||||    
T  7344946 ggttatatatgtttttagtccttacattttgtgcccctttgaagaataatccatacattttattatatgtttttaaaatcctcatattttatgtccgtta 7344847  T
Q  356 tcataatta 364  Q
    ||| |||||    
T  7344846 tcaaaatta 7344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 363
Target Start/End: Complemental strand, 26243482 - 26243378
Alignment:
Q  259 taaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatca 358  Q
    |||||||||||||||||||||||||||||     ||| ||||||| ||  ||||||  |||||||||| ||||||||| |||||||| ||||| ||||||    
T  26243482 taaatatgtttttagtccttatattttgcgctcctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccattatca 26243383  T
Q  359 taatt 363  Q
     ||||    
T  26243382 aaatt 26243378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 6297463 - 6297573
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||| ||||||||||| |||||||  |  ||| ||||||| | | || |||  |||||||||| ||||||||| |||||||| |||| |||||    
T  6297463 gttaaatatgtctttagtccttacattttgcgcccctttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacattttctctctgttat 6297562  T
Q  357 cataattagtc 367  Q
    || ||||||||    
T  6297563 caaaattagtc 6297573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 17915596 - 17915480
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| ||||||      ||| ||||||| ||| || ||| ||||||||||| || |||||| |||||||| |||| ||||    
T  17915596 ggttaaatatgtttttagtccttacattttgtgctcctttgaagaata-tccttacattttattaaatgttttttaaatcctcacattttatctctgtta 17915498  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||||| ||||    
T  17915497 tcaaaattagtctttgct 17915480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 4624533 - 4624624
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacatttttt 347  Q
    |||||||||||||||| ||||||||||||||||| | ||| ||||||| ||  || |||  | |||||||| |||||||||  |||||||||    
T  4624533 ggttaaatatgtttttggtccttatattttgcatgactttgaagaatagtctttacatttcaataaatgtttttaaaatccctacatttttt 4624624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 12489618 - 12489517
Alignment:
Q  254 atggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    |||||||||||||||||||||||||| ||||||| || || | ||||||| ||| || |||  ||| |||||| |||||||||  ||||||| |||| ||    
T  12489618 atggttaaatatgtttttagtccttacattttgcgtcgttatgaagaatagtccttacatttcatt-aatgtttttaaaatccttacattttatctctgt 12489520  T
Q  354 tat 356  Q
    |||    
T  12489519 tat 12489517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 44148578 - 44148688
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    |||||||||||||||||||| || ||||| |    |||| ||||||| ||| || ||| || |||| ||| ||||||||| ||||||||| |||||||||    
T  44148578 gttaaatatgtttttagtccctacattttacgctcttttgaagaatagtccctacattttaataaacgtttttaaaatcctcacatttttactccgttat 44148677  T
Q  357 cataattagtc 367  Q
    || || |||||    
T  44148678 caaaaatagtc 44148688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 21006152 - 21006105
Alignment:
Q  316 tattaaatgttcttaaaatccacacattttttctccgttatcataatt 363  Q
    ||||||||||| ||||||||| |||||||| |||||||||||| ||||    
T  21006152 tattaaatgtttttaaaatcctcacattttatctccgttatcaaaatt 21006105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 29917627 - 29917529
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || ||||||||  ||||| | ||||| ||| || |||  | |||||||| |||||||||  |||||||||||||||||    
T  29917627 ggttaaatatgtttttggtccctacattttgcacgattttga-gaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgtta 29917529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 367
Target Start/End: Original strand, 44024230 - 44024336
Alignment:
Q  261 aatatgtttttagtccttatattttgca-tcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcat 359  Q
    ||||| ||||||||||||| |||||||| ||| ||| ||||||| |||||| |||  |  ||||||| ||||||||  |||||||| || |||||||||     
T  44024230 aatatatttttagtccttaaattttgcactca-tttgaagaatagtccatacatttcaccaaatgtttttaaaatcatcacattttatccccgttatcaa 44024328  T
Q  360 aattagtc 367  Q
    ||||||||    
T  44024329 aattagtc 44024336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 4694529 - 4694493
Alignment:
Q  249 aatttatggttaaatatgtttttagtccttatatttt 285  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  4694529 aatttagggttaaatatgtttttagtccctatatttt 4694493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 373
Target Start/End: Complemental strand, 108219 - 108095
Alignment:
Q  249 aatttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttc 348  Q
    |||||| | |||||||||||||||||||||| |||||||  | |||| |||||| || | || |||  |||||||||| ||||||||| |||||||| ||    
T  108219 aatttaggattaaatatgtttttagtccttacattttgcgcccttttgaagaattattcctacatttcattaaatgtttttaaaatcctcacattttatc 108120  T
Q  349 tccgttatcataattagtctctgct 373  Q
    |||||||||| ||||||||||||||    
T  108119 tccgttatcaaaattagtctctgct 108095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 87350 - 87239
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||||||||||||||||  ||  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| ||||||||||    
T  87350 gttaaatatgtttttagtccttatattttgtgtccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 87251  T
Q  357 cataattagtct 368  Q
    || |||||||||    
T  87250 caaaattagtct 87239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 16284275 - 16284385
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||||||||| ||||||| |  |||| ||||||| ||  |||||| ||||||||||| ||||||||| || ||||| ||||||||||    
T  16284275 gttaaatatgtttttagtccttacattttgcgtttttttgaagaatagtctttatattttattaaatgtttttaaaatcctcatattttatctccgttat 16284374  T
Q  357 cataattagtc 367  Q
    || ||||||||    
T  16284375 caaaattagtc 16284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 364
Target Start/End: Complemental strand, 18999730 - 18999622
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||| |||  ||||||| || ||||||||| |||||||| |||  ||||    
T  18999730 ggttaaatatgtttttagtccttacattttgcttcattttgaagaatagtccatacatttcattaaatatttttaaaatcctcacattttatctttgtta 18999631  T
Q  356 tcataatta 364  Q
    ||| |||||    
T  18999630 tcaaaatta 18999622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 18999366 - 18999477
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| ||||||||   |||| ||||||| |||||| |||  ||||||| || ||||||||| | |||||| |||||||||    
T  18999366 ggttaaatatgtttttagtccttacattttgcactcttttgaagaatagtccatacatttcattaaatatttttaaaatcctctcattttatctccgtta 18999465  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  18999466 tcaaaattagtc 18999477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 8648157 - 8648043
Alignment:
Q  254 atggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    ||||||||||||| |||||||||||| ||||||| || |||  ||||||| ||  || |||  ||||||| || ||||||||| ||||||||||||||||    
T  8648157 atggttaaatatgattttagtccttacattttgcgtcctttggaagaatagtctttacatttcattaaatatttttaaaatcctcacattttttctccgt 8648058  T
Q  354 tatcataattagtct 368  Q
    ||||| |||||||||    
T  8648057 tatcaaaattagtct 8648043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 31176507 - 31176618
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||||||||||| ||  ||| ||||| | |||||| |||  |||||||||| ||||||||  || ||||| || ||||||    
T  31176507 ggttaaatatgtttttagtccttatattttgcgtccctttgaagaacagtccatacatttcattaaatgtttttaaaatcgtcatattttatccccgtta 31176606  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  31176607 tcaaaattagtc 31176618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 367
Target Start/End: Complemental strand, 8750449 - 8750339
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||||||||| ||||||| |   ||| ||||||| ||| || ||| ||||||||||  ||||||||| || ||||| ||||||||||    
T  8750449 gttaaatatgtttttagtccttacattttgcgtttctttgaagaatagtccctacattttattaaatgtgtttaaaatcctcatattttatctccgttat 8750350  T
Q  357 cataattagtc 367  Q
    || ||||||||    
T  8750349 caaaattagtc 8750339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 31588437 - 31588319
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcat-tttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtt 354  Q
    |||||||||||||||||||||||| ||||||| ||   ||| ||||||| ||| || |||  ||||||| || |||||||||  ||||||| ||||||||    
T  31588437 ggttaaatatgtttttagtccttacattttgcgtcccctttgaagaatagtccctacatttcattaaatatttttaaaatcctaacattttatctccgtt 31588338  T
Q  355 atcataattagtctctgct 373  Q
    |||| |||||||| |||||    
T  31588337 atcaaaattagtccctgct 31588319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 13987284 - 13987400
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttctt-aaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||| |||| |||| ||  | |||| ||||||||||  ||||||  |||||||||| || ||||| | |||||||| ||||||||||    
T  13987284 ttaaatatgtttttagttcttacatttcgcgcccttttgaagaataatctctatatttcattaaatgttttttaaaattctcacattttatctccgttat 13987383  T
Q  357 cataattagtctctgct 373  Q
     | ||||||||||||||    
T  13987384 taaaattagtctctgct 13987400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 22231250 - 22231170
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatcc 336  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||| ||| ||||||  |||||||||| || ||||||    
T  22231250 ggttaaatatgtttttagtccttatattttgcgcccctttaaagaatagtccctatatttcattaaatgtttttgaaatcc 22231170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 369
Target Start/End: Original strand, 14625122 - 14625234
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || ||||| |   |||||||| | || |||||| ||| || |||||||| |||||||||  |||||||| ||||||||    
T  14625122 ggttaaatatgtttttggtccctacattttacgcaattttaaata-tagtccataaattttaataaatgtttttaaaatccctacatttttcctccgtta 14625220  T
Q  356 tcataattagtctc 369  Q
    |||||| |||||||    
T  14625221 tcataaatagtctc 14625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 3406949 - 3406839
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||  |||||||||||  | |||| ||||||| | |  ||||| |||||||| || ||||||| | |||||||| |||| ||||    
T  3406949 ggttaaatatgtttttagtt-ttatattttgcgcctttttgaagaatagttccaatattttattaaatatttttaaaattctcacattttatctctgtta 3406851  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  3406850 tcaaaattagtc 3406839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 3191798 - 3191914
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||||| || ||||||||  |||||  |||||| ||| || |||  | |||||||| |||||||||  |||||||| ||||||||    
T  3191798 ggttaaatatgtttttagtccctacattttgcacgatttt-gagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgtta 3191896  T
Q  356 tcataattagtctctgct 373  Q
     | ||| ||||| |||||    
T  3191897 gcgtaaatagtccctgct 3191914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 119184 - 119264
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatcc 336  Q
    |||||||||||||||| ||||||| ||||||| | | ||||||||||| ||| || |||  | |||||||| |||||||||    
T  119184 ggttaaatatgtttttggtccttagattttgcgtgactttaaagaatagtccttacatttcaataaatgtttttaaaatcc 119264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 3935450 - 3935505
Alignment:
Q  316 tattaaatgttcttaaaatccacacattttttctccgttatcataattagtctctg 371  Q
    ||||||||||| ||||||||| |||||||| ||||| ||||||  |||||||||||    
T  3935450 tattaaatgtttttaaaatcctcacattttatctccattatcaatattagtctctg 3935505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 14626185 - 14626074
Alignment:
Q  250 atttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttct 349  Q
    |||| ||||||||||||||||| |||| |||| |||||   | |||||| |||| ||| || |||  | |||||||| |||||||||  ||||||||| |    
T  14626185 atttttggttaaatatgtttttggtccctatactttgcgcgactttaaaaaatagtccctacatttcaataaatgtttttaaaatccctacattttttat 14626086  T
Q  350 ccgttatcataa 361  Q
    | ||||||||||    
T  14626085 ctgttatcataa 14626074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 370
Target Start/End: Original strand, 8749998 - 8750124
Alignment:
Q  244 gattgaatttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacatt 343  Q
    |||||| |||| ||||||||||||||||| | |||| |||||||  |  ||| || |||||||| || |||  ||||||| || ||||||||   || ||    
T  8749998 gattgattttagggttaaatatgtttttaattcttacattttgcgcccctttgaataataatccctacatttcattaaatatttttaaaatcgtaacgtt 8750097  T
Q  344 ttttctccgttatcataattagtctct 370  Q
    || ||| |||||||| |||||||||||    
T  8750098 ttatcttcgttatcaaaattagtctct 8750124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 286
Target Start/End: Original strand, 15978389 - 15978419
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttg 286  Q
    |||||||||||||||||||||||||||||||    
T  15978389 ggttaaatatgtttttagtccttatattttg 15978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 332
Target Start/End: Complemental strand, 18339395 - 18339314
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaa 332  Q
    |||| |||||||||| ||||| ||||||| ||||| | | ||||| ||||||||||| || ||| || |||||||| |||||    
T  18339395 tttagggttaaatatatttttggtccttacattttacgttattttgaagaataatccttacattttaataaatgtttttaaa 18339314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 87019 - 87107
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattt 344  Q
    |||||||||||||||||||| ||||||||||| |   | | |||||||| || || |||  |||||||||| ||||||||  |||||||    
T  87019 ggttaaatatgtttttagtctttatattttgcgttcatctgaagaataacccctacatttcattaaatgtttttaaaatcttcacattt 87107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 373
Target Start/End: Complemental strand, 3935743 - 3935667
Alignment:
Q  297 aagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataattagtctctgct 373  Q
    ||||||||||| || |||  ||||| |||| ||||||||| |||||||| |||  ||||| | ||||||||||||||    
T  3935743 aagaataatccctacatttcattaattgtttttaaaatcctcacattttatctttgttattaaaattagtctctgct 3935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 281
Target Start/End: Complemental strand, 29959203 - 29959175
Alignment:
Q  253 tatggttaaatatgtttttagtccttata 281  Q
    |||||||||||||||||||||||||||||    
T  29959203 tatggttaaatatgtttttagtccttata 29959175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 30415509 - 30415465
Alignment:
Q  321 aatgttcttaaaatccacacattttttctccgttatcataattag 365  Q
    |||||| ||||||||| |||||||| |||||||||||| ||||||    
T  30415509 aatgtttttaaaatcctcacattttgtctccgttatcaaaattag 30415465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 34448483 - 34448519
Alignment:
Q  245 attgaatttatggttaaatatgtttttagtccttata 281  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  34448483 attgattttagggttaaatatgtttttagtccttata 34448519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 18180368 - 18180257
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| || |||||||||||  || ||| ||||||| |||||| ||| ||||||||||| ||||||||| || ||||| |||||||||    
T  18180368 ggttaaatatgtttttaatctttatattttgcgccactttgaagaatagtccatacattttattaaatgtttttaaaatcctcatattttatctccgtta 18180269  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  18180268 tcaaaattagtc 18180257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 31436473 - 31436356
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||| |||||||||||| ||||||  || |||| ||||||| ||  |||||| ||||||||||| |||||||   |||||||| |||||||||    
T  31436473 ggttaaatatgattttagtccttacattttgtgtccttttgaagaatagtcactatattttattaaatgtttttaaaattatcacattttatctccgtta 31436374  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||||||||||    
T  31436373 tcaaaattagtctctgct 31436356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 18179879 - 18179993
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||| |||||||||||||||| |||||||| |  ||| || |||| ||| ||||||  ||||| |||| ||||||||| |||||||| |||||||||    
T  18179879 ggttaaacatgtttttagtccttacattttgcacccctttgaaaaatagtccttatatttcattaattgtttttaaaatcctcacattttatctccgtta 18179978  T
Q  356 tcataattagtctct 370  Q
    ||| |||||||||||    
T  18179979 tcaaaattagtctct 18179993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 9880484 - 9880595
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| ||||||||||  ||| ||||| | ||  || |||  |||||||||| ||||||||| |||||||| ||| |||||    
T  9880484 ggttaaatatgtttttagtccttacattttgcatccctttgaagaaaagtctctacatttcattaaatgtttttaaaatcctcacattttatcttcgtta 9880583  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  9880584 tcaaaattagtc 9880595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 3591427 - 3591310
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgca-tcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtt 354  Q
    |||||||||| ||||||||||||| |||||||  |||||| || ||||| |||||| ||| ||||||||||| ||||||||| |||||||| ||||| ||    
T  3591427 ggttaaatatatttttagtccttacattttgcgctcatttgaa-gaatagtccatacattttattaaatgtttttaaaatcctcacattttatctccatt 3591329  T
Q  355 atcataattagtctctgct 373  Q
    || | |||||||| |||||    
T  3591328 ataaaaattagtccctgct 3591310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 5683651 - 5683534
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||||||||| | || |||| ||||||| ||| || |||  ||||||| || ||||||||| |  ||||| |||||| ||    
T  5683651 ggttaaatatgtttttagtccttatattttacgtctttttgaagaatagtccctacatttcattaaatatttttaaaatcctcgtattttatctccggta 5683552  T
Q  356 tcataattagtctctgct 373  Q
    ||| |||||||| |||||    
T  5683551 tcaaaattagtcactgct 5683534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 50359529 - 50359412
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||| || |||||| |||||||  |  ||| ||||||| ||| | ||||  |||||||||| ||||||||| |||||||| |||| ||||    
T  50359529 ggttaaatatgtttatattccttacattttgcgcccatttgaagaatagtccttttatttcattaaatgtttttaaaatcctcacattttatctctgtta 50359430  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||||||||||    
T  50359429 tcaaaattagtctctgct 50359412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 48154972 - 48155091
Alignment:
Q  254 atggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    ||||||||||||||||||| |||||||||||| |  |  ||| ||||||| ||| || ||| ||||||||||| ||||||||| || ||||| ||||||     
T  48154972 atggttaaatatgtttttaatccttatattttacgccgcttt-aagaatagtccttacattttattaaatgtttttaaaatcctcatattttatctccga 48155070  T
Q  354 tatcataattagtctctgctc 374  Q
    ||||| ||||| |||||||||    
T  48155071 tatcaaaattaatctctgctc 48155091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 256 - 366
Target Start/End: Complemental strand, 42723349 - 42723235
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatatta----tattaaatgttcttaaaatccacacattttttctcc 351  Q
    ||||||||||||||||| ||||||||||||||     ||||||||||||| ||||||||     ||||||||||| ||||||||| |||||||| | |||    
T  42723349 ggttaaatatgtttttaatccttatattttgcgctcctttaaagaataattcatatatttaatttattaaatgtttttaaaatcctcacattttatatcc 42723250  T
Q  352 gttatcataattagt 366  Q
    |||| || |||||||    
T  42723249 gttagcaaaattagt 42723235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 19895400 - 19895512
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||       ||| ||||||| |||||| |||  |||||||||| |||||| || |||||||| |||||||||    
T  19895400 ggttaaatatgtttttagtccttacattttatgctcgtttgaagaatagtccatacatttaattaaatgtttttaaaaccctcacattttatctccgtta 19895499  T
Q  356 tcataattagtct 368  Q
    ||| |||||||||    
T  19895500 tcaaaattagtct 19895512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 9880885 - 9880763
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgca-tcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttct 349  Q
    |||||||||||||||||||||| | |||| |||||||  |||||| || ||||| |   |||||| ||||||||||| ||||||| | |||||||| |||    
T  9880885 tttatggttaaatatgtttttaattcttacattttgcgctcatttgaa-gaatagtttctatattttattaaatgtttttaaaattctcacattttatct 9880787  T
Q  350 ccgttatcataattagtctctgct 373  Q
    | ||||||| |||||||| |||||    
T  9880786 ctgttatcaaaattagtccctgct 9880763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 6751444 - 6751326
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttg-catcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtt 354  Q
    |||||||||||||||||||| ||| |||||| | ||  ||||||||| | ||| || |||  ||||||| || ||||||||| |||||||| |||  |||    
T  6751444 ggttaaatatgtttttagtcattacattttggcgtccctttaaagaaaagtccttacatttcattaaatttttttaaaatcctcacattttatctttgtt 6751345  T
Q  355 atcataattagtctctgct 373  Q
    |||| ||||||||||||||    
T  6751344 atcaaaattagtctctgct 6751326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 346
Target Start/End: Complemental strand, 1501078 - 1500981
Alignment:
Q  249 aatttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttt 346  Q
    |||||| ||||||||||||||||||||| ||||||||||    |||| ||||||| ||| || |||  |||||||||| |||||||||  ||||||||    
T  1501078 aatttagggttaaatatgtttttagtccctatattttgcgctcttttgaagaatagtccctacatttcattaaatgtttttaaaatccctacattttt 1500981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 5683161 - 5683278
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| |||||| ||||||| ||  ||| || |||| ||| || |||  |||||||||  ||||||||| |||||||| ||| | |||    
T  5683161 ggttaaatatgtttttaatccttacattttgcgtctctttgaaaaatagtccctacatttcattaaatgtatttaaaatcctcacattttatcttcatta 5683260  T
Q  356 tcataattagtctctgct 373  Q
    ||| |||||||| |||||    
T  5683261 tcaaaattagtccctgct 5683278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 50359125 - 50359234
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| |||||||||||||||||||||  || ||  ||||||| ||| || |||  |||||||||| || |||||  |||||||| | |||||||    
T  50359125 ggttaaatatttttttagtccttatattttgcgccaattcgaagaatagtccctacatttcattaaatgttttttaaatcttcacattttatttccgtta 50359224  T
Q  356 tcataattag 365  Q
    ||| ||||||    
T  50359225 tcaaaattag 50359234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 36792240 - 36792338
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||| ||| | || ||||||| | ||||| ||||||||||| ||||||  | |||||||| |||||||||  |||||||| ||||||||    
T  36792240 ggttaaatatgttttaagttcctacattttgcgtgattttcaagaataatccctatatttcaataaatgtt-ttaaaatccctacatttttactccgtta 36792338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 36793664 - 36793565
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||||| |||||||||| | | ||| ||||||| ||  || ||| || |||||||| |||||||||  ||||||||  |||||||    
T  36793664 ggttaaatatgtttttagtccctatattttgcgtgactttgaagaatagtctctacattttaataaatgtttttaaaatccctacatttttattccgtta 36793565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 45664687 - 45664801
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgca-tcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtt 354  Q
    ||||||||||||||||||||| || ||||| |  |||||| || ||||| ||  || ||| || |||||||| ||||||||| ||||||||| |||||||    
T  45664687 ggttaaatatgtttttagtccctacattttacgctcatttgaa-gaatagtctctacattttaataaatgtttttaaaatccccacatttttactccgtt 45664785  T
Q  355 atcataattagtctct 370  Q
    |||| || ||||||||    
T  45664786 atcaaaaatagtctct 45664801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 4288527 - 4288422
Alignment:
Q  254 atggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    ||||||||||||||||||||||||||||||||||  |  ||| ||||||| |||      || |||||||||| ||||||||| |||||||| | | |||    
T  4288527 atggttaaatatgtttttagtccttatattttgcgcccctttgaagaatagtcc-----ctacattaaatgtttttaaaatcctcacattttatattcgt 4288433  T
Q  354 tatcataatta 364  Q
    ||||| |||||    
T  4288432 tatcaaaatta 4288422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 367
Target Start/End: Original strand, 6751049 - 6751158
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    |||||||||| ||||||| ||| ||||||   |  ||| ||||||||||| ||||||  |||||||||| | ||||||  | |||||| |||||||||||    
T  6751049 ttaaatatgtgtttagtctttacattttgtgcctctttgaagaataatccttatatttcattaaatgttttaaaaatcatcgcattttatctccgttatc 6751148  T
Q  358 ataattagtc 367  Q
    | ||||||||    
T  6751149 aaaattagtc 6751158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 47541851 - 47541803
Alignment:
Q  319 taaatgttcttaaaatccacacattttttctccgttatcataattagtc 367  Q
    |||||||| ||||||||| |||||||| |||||||||||| ||||||||    
T  47541851 taaatgtttttaaaatcctcacattttatctccgttatcaaaattagtc 47541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 287
Target Start/End: Complemental strand, 47542109 - 47542078
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgc 287  Q
    ||||||||||||||||||||||||||||||||    
T  47542109 ggttaaatatgtttttagtccttatattttgc 47542078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 47541527 - 47541607
Alignment:
Q  265 tgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacatttt 345  Q
    ||||||||||||||| |||||   ||  ||| ||||||| ||| ||||||  |||||||||| ||||||||| ||||||||    
T  47541527 tgtttttagtccttacattttatgtccctttgaagaatagtccctatatttcattaaatgtttttaaaatcctcacatttt 47541607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 368
Target Start/End: Original strand, 2517408 - 2517525
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctc 350  Q
    |||| |||||||||| ||||||||||||| ||||||| ||  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| ||||    
T  2517408 tttagggttaaatatatttttagtccttacattttgcgtctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctc 2517507  T
Q  351 cgttatcataattagtct 368  Q
    |||||||| |||||||||    
T  2517508 cgttatcaaaattagtct 2517525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 367
Target Start/End: Original strand, 2191216 - 2191328
Alignment:
Q  255 tggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtt 354  Q
    ||||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| ||||||||    
T  2191216 tggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctccgtt 2191315  T
Q  355 atcataattagtc 367  Q
    |||| ||||||||    
T  2191316 atcaaaattagtc 2191328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 39729696 - 39729584
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||| || |||||||||||||||||||||| ||| ||| ||||||| ||  ||||||  ||||||| || ||||||||| |||||||| |||||||||    
T  39729696 ggttaattacgtttttagtccttatattttgcgtcagtttgaagaatagtctttatatttcattaaatatttttaaaatcctcacattttatctccgtta 39729597  T
Q  356 tcataattagtct 368  Q
    ||  |||||||||    
T  39729596 tcgaaattagtct 39729584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 3691479 - 3691368
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||||||| ||||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||  |||||||| |||||||||    
T  3691479 ggttaaatatgtttttagtccttgtattttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcttcacattttatctccgtta 3691380  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  3691379 tcaaaattagtc 3691368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 18107515 - 18107410
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||||| |  ||||||| | | ||||||||||||||| || ||| || |||||||| |||||||||  | |||||| ||||||||    
T  18107515 ggttaaatatgtttttagtccctgcattttgcgtgactttaaagaataatccttacattttaataaatgtttttaaaatccctaaatttttcctccgtta 18107416  T
Q  356 tcataa 361  Q
    ||||||    
T  18107415 tcataa 18107410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 21217411 - 21217295
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| || ||||||    
T  21217411 ggttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatccccgtta 21217312  T
Q  356 tcataattagtctctgc 372  Q
     || |||||||| ||||    
T  21217311 acaaaattagtccctgc 21217295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 21264991 - 21265107
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| || ||||||    
T  21264991 ggttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatccccgtta 21265090  T
Q  356 tcataattagtctctgc 372  Q
     || |||||||| ||||    
T  21265091 acaaaattagtccctgc 21265107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 21182307 - 21182422
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| |||||||   |||||||| |||| ||||    
T  21182307 ggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaattttcacattttatctctgtta 21182406  T
Q  356 tcataattagtctctg 371  Q
    ||| ||||||||||||    
T  21182407 tcaaaattagtctctg 21182422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 372
Target Start/End: Original strand, 3691094 - 3691199
Alignment:
Q  267 tttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataattagt 366  Q
    |||||||||||||||||||||  | |||| ||||||| | | || |||  |||||||||| ||||||||| |||||||| || ||||||||| |||||||    
T  3691094 tttttagtccttatattttgcgcccttttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacattttatcaccgttatcaaaattagt 3691193  T
Q  367 ctctgc 372  Q
    | ||||    
T  3691194 ccctgc 3691199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 24093644 - 24093535
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    |||||||| ||||||  ||||| |||||||| |  ||| ||||||| | | |||||| ||||||||||| |||||||||  ||||||| |||||||||||    
T  24093644 ttaaatatctttttaacccttacattttgcacccatttgaagaatagtgcctatattttattaaatgtttttaaaatccttacattttatctccgttatc 24093545  T
Q  358 ataattagtc 367  Q
    | ||||||||    
T  24093544 aaaattagtc 24093535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 2035608 - 2035707
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| |||||||| |    |||||||||||||||| || ||| || |||||||| |||||||||  ||||||| |||||||||    
T  2035608 ggttaaatatgtttttggtccctatattttaccctcttttaaagaataatccctacattttaataaatgtttttaaaatccctacattttatctccgtta 2035707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 21216923 - 21217034
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| |||||  ||    
T  21216923 ggttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccacta 21217022  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  21217023 tcaaaattagtc 21217034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 21265479 - 21265368
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| |||||  ||    
T  21265479 ggttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccacta 21265380  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  21265379 tcaaaattagtc 21265368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 32860814 - 32860923
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||| | ||||||||||| ||  ||| || |||| ||  ||||||  |||||||||| |||||||||  ||||||| ||||||| |    
T  32860814 ggttaaatatgtttttagcctttatattttgcgtccctttgaaaaatagtcgttatatttcattaaatgtttttaaaatcctaacattttatctccgtga 32860913  T
Q  356 tcataattag 365  Q
    ||| ||||||    
T  32860914 tcaaaattag 32860923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 24093156 - 24093267
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| | |||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| ||||| || ||| |||||    
T  24093156 ggttaaatatgtttttagtccttacactttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatcttctcttcgtta 24093255  T
Q  356 tcataattagtc 367  Q
    ||| ||| ||||    
T  24093256 tcaaaatcagtc 24093267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 39097046 - 39096930
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || ||||||||  |||||  |||||||||| || |||  | |||||||| |||||||||  |||||||| ||||||||    
T  39097046 ggttaaatatgtttttggtccctacattttgcacgatttt-gagaataatccttacatttcaataaatgtttttaaaatccctacatttttcctccgtta 39096948  T
Q  356 tcataattagtctctgct 373  Q
     | ||| ||||| |||||    
T  39096947 gcgtaaatagtccctgct 39096930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 10709475 - 10709574
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| ||| ||| ||||||| | ||||| ||||||| ||| || |||  | |||||||| |||||||||  |||||||| | ||||||    
T  10709475 ggttaaatatgtttttggtctttagattttgcgtgattttgaagaatagtccttacatttcaataaatgtttttaaaatccctacatttttccaccgtta 10709574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 32114561 - 32114450
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| |||||||  |  || |||||||| ||| || |||  ||||||| || ||||||| | |||| ||| |||| ||||    
T  32114561 ggttaaatatatttttagtccttacattttgcgcctcttcaaagaatagtccttacatttcattaaatatttttaaaattctcacactttatctctgtta 32114462  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  32114461 tcaaaattagtc 32114450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 39096524 - 39096622
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| |||||||||    ||||| | ||||| ||| || |||  | |||||||| |||||||||| |||||||||||||||||    
T  39096524 ggttaaatatgtttttggtccctatattttgtgcgattttga-gaatagtccttacatttcaataaatgtttttaaaatccatacattttttctccgtta 39096622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 2191392 - 2191466
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaa 332  Q
    |||||||||||||| ||||||| ||||||| | | ||| ||||||||||| || ||| || |||||||| |||||    
T  2191392 ttaaatatgtttttggtccttacattttgcttgactttgaagaataatccttacattttaataaatgtttttaaa 2191466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 7083838 - 7083792
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaata 303  Q
    |||||||||||||||| |||||||||||||||||  |||||| ||||    
T  7083838 gttaaatatgtttttaatccttatattttgcatccctttaaaaaata 7083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 356
Target Start/End: Original strand, 7083525 - 7083622
Alignment:
Q  259 taaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    |||||||||||||| |||||| ||||| | ||  ||| ||||||| ||| || |||  ||||||| || ||||||||| |||||||| ||||| ||||    
T  7083525 taaatatgtttttaatccttacattttacgtccatttgaagaatagtccctacatttcattaaatttttttaaaatcctcacattttatctcccttat 7083622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 7083690 - 7083746
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatcc 307  Q
    |||| |||||||||||||||| |||| || ||||||||| | ||| |||||||||||    
T  7083690 tttagggttaaatatgtttttggtccctacattttgcatgactttgaagaataatcc 7083746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 10706680 - 10706624
Alignment:
Q  317 attaaatgttcttaaaatccacacattttttctccgttatcataattagtctctgct 373  Q
    ||||||| || ||||||||| |||||||| |||||||||||| || ||||| |||||    
T  10706680 attaaatatttttaaaatcctcacattttatctccgttatcaaaactagtccctgct 10706624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 34794 - 34909
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    |||||||||||||||||||||||||||||| ||  ||| || |||  |||||| |||  |||||||||| ||||| | | |||||||| |||||||||||    
T  34794 ttaaatatgtttttagtccttatattttgcgtctatttgaataatggtccatacatttcattaaatgtttttaaagtactcacattttatctccgttatc 34893  T
Q  358 ataattagtctctgct 373  Q
    | ||||||||||||||    
T  34894 aaaattagtctctgct 34909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 366
Target Start/End: Complemental strand, 35281 - 35172
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||||||||| ||||||| ||  ||| ||||||| ||  || ||| |||| |||||| ||||||||| |||||||| |||| |||||    
T  35281 gttaaatatgtttttagtccttacattttgcgtccctttgaagaatagtctctacattttattgaatgtttttaaaatcctcacattttatctcggttat 35182  T
Q  357 cataattagt 366  Q
     | |||||||    
T  35181 gaaaattagt 35172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 5974011 - 5974122
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||||||||||||||||| |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| | |||||||    
T  5974011 ggttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccctacatttcattaaatgtttttaaaatccccacattttatttccgtta 5974110  T
Q  356 tcataattagtc 367  Q
    | | ||||||||    
T  5974111 ttaaaattagtc 5974122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 8710430 - 8710341
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacatttt 345  Q
    ||||||||||||||||||||||||||||||||| |  ||| ||||||| ||| || |||  |||||||||| ||||||||| ||||||||    
T  8710430 ggttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatccccacatttt 8710341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 1869451 - 1869559
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| ||| | || || |||||| ||||||   || |||  |||||||||| ||||||||| |||||||| |||||||||    
T  1869451 ggttaaatatgtttttagtccttacattctacaccactttaaaaaataatttctacatttcattaaatgtttttaaaatcctcacattttatctccgtta 1869550  T
Q  356 tcataatta 364  Q
    ||| |||||    
T  1869551 tcaaaatta 1869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 25932476 - 25932359
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaag---aataatccatatattatattaaatgttcttaaaatccacacattttttctccgtt 354  Q
    ||||||||||||||||||||||||||||||| |||||| |||   |||| ||  || |||   || |||||| ||||||| | |||||||| ||||||||    
T  25932476 ttaaatatgtttttagtccttatattttgcaccattttgaagattaatagtcactacatttcgttcaatgttattaaaattctcacattttatctccgtt 25932377  T
Q  355 atcataattagtctctgc 372  Q
    |||| |||||||||||||    
T  25932376 atcaaaattagtctctgc 25932359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 211441 - 211530
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacatttt 345  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||| | ||||||||| ||||||||    
T  211441 ggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccgtacatttcattaaatgattttaaaatcctcacatttt 211530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 21113090 - 21113146
Alignment:
Q  317 attaaatgttcttaaaatccacacattttttctccgttatcataattagtctctgct 373  Q
    |||||||||| ||||||| | |||||||| ||||| |||||| ||||||||||||||    
T  21113090 attaaatgtttttaaaattctcacattttatctcctttatcaaaattagtctctgct 21113146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 365
Target Start/End: Original strand, 4510183 - 4510298
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatcc-acacattttttct 349  Q
    |||| |||||||||||||||||||||||| ||||| |  |  ||| ||||||| ||| || |||  |||||||||| |||||||||  || ||||| |||    
T  4510183 tttagggttaaatatgtttttagtccttacattttacgcctatttgaagaatagtccctacatttcattaaatgtttttaaaatcctccatattttatct 4510282  T
Q  350 ccgttatcataattag 365  Q
    | ||||||| ||||||    
T  4510283 cggttatcaaaattag 4510298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 373
Target Start/End: Complemental strand, 14713095 - 14712979
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    |||||||||||||||| | |||| |||||||    |||| ||||||| ||| || |||  |||||||||| |  |||| | || ||||| |||| |||||    
T  14713095 gttaaatatgtttttaattcttacattttgcgctcttttgaagaatagtccttacatttcattaaatgttttagaaatgctcatattttatctctgttat 14712996  T
Q  357 cataattagtctctgct 373  Q
    || ||||||||||||||    
T  14712995 caaaattagtctctgct 14712979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 19595739 - 19595659
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatcc 336  Q
    ||||||||||||| ||||||| || |||||||| | |||||||||||| ||| || |||  | ||||| || |||||||||    
T  19595739 ggttaaatatgttattagtccatacattttgcacctttttaaagaatagtccctacatttcaataaatatttttaaaatcc 19595659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 364
Target Start/End: Complemental strand, 44504481 - 44504368
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctc 350  Q
    |||| |||||||| ||||||||||||||| |||||||| |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| ||||    
T  44504481 tttagggttaaatgtgtttttagtccttacattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctc 44504382  T
Q  351 cgttatcataatta 364  Q
    |||||||| |||||    
T  44504381 cgttatcaaaatta 44504368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 22814296 - 22814413
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| | |||| |||||||  |  ||| ||||||| |||||| |||  |||||||||| ||||||||| |||||||| ||| |||||    
T  22814296 ggttaaatatgtttttaattcttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaatcctcacattttatcttcgtta 22814395  T
Q  356 tcataattagtctctgct 373  Q
    ||| |||||||| |||||    
T  22814396 tcaaaattagtccctgct 22814413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 51471335 - 51471450
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||| ||||| |||| ||||||| ||  ||| ||||||| |   || |||  |||||||||| ||||||||| |||||||| |||||||||    
T  51471335 ggttaaatatgttcttagttcttacattttgcgtccctttgaagaatagtttctacatttcattaaatgtttttaaaatcctcacattttatctccgtta 51471434  T
Q  356 tcataattagtctctg 371  Q
    ||| ||||||||||||    
T  51471435 tcaaaattagtctctg 51471450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 371
Target Start/End: Complemental strand, 9218608 - 9218489
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctc 350  Q
    |||| |||||||||||||||||||| ||| |||||||     ||| ||||||| ||| ||||||  |||||||||| ||||||||  |||||||| |||     
T  9218608 tttagggttaaatatgtttttagtcattacattttgcgctcctttgaagaatagtccctatatttcattaaatgtttttaaaatcatcacattttatctt 9218509  T
Q  351 cgttatcataattagtctctg 371  Q
    |||||||| ||||||||||||    
T  9218508 cgttatca-aattagtctctg 9218489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 364
Target Start/End: Original strand, 25770314 - 25770429
Alignment:
Q  249 aatttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttc 348  Q
    |||||| |||| ||||||||||||||||||| |||||| |||  ||| ||||||| ||| || |||  |||||||||| ||| ||||| |||||||| ||    
T  25770314 aatttagggttcaatatgtttttagtccttacattttgtatccctttgaagaatagtccctacatttcattaaatgtttttagaatcctcacattttatc 25770413  T
Q  349 tccgttatcataatta 364  Q
      |||||||| |||||    
T  25770414 atcgttatcaaaatta 25770429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 367
Target Start/End: Complemental strand, 13637873 - 13637759
Alignment:
Q  253 tatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccg 352  Q
    ||||||||||||||||| ||||||||| |||||||  |  ||| ||||||| ||  || |||  ||||||| || ||||||||| |||||||| ||||||    
T  13637873 tatggttaaatatgtttctagtccttacattttgcgcccctttgaagaatagtctctacatttcattaaatatttttaaaatcctcacattttatctccg 13637774  T
Q  353 ttatcataattagtc 367  Q
    |||||| || |||||    
T  13637773 ttatcaaaactagtc 13637759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 37172084 - 37172192
Alignment:
Q  259 taaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatca 358  Q
    ||||||| ||||||||||||| |||||||     ||||||||||| ||  || |||  |||||||||| ||||||||| |||| ||| ||||||||||||    
T  37172084 taaatatttttttagtccttacattttgcgcttatttaaagaatagtctctacatttcattaaatgtttttaaaatcctcacagtttatctccgttatca 37172183  T
Q  359 taattagtc 367  Q
     ||||||||    
T  37172184 aaattagtc 37172192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 38485699 - 38485813
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    ||||||||| |||||||||||| ||||||   |  ||| ||||||| |||||| ||| ||||| ||||| |||||||||   |||||| |||||||||||    
T  38485699 ttaaatatgattttagtccttacattttgtgcctctttgaagaatagtccatacattttattatatgtttttaaaatccttgcatttt-tctccgttatc 38485797  T
Q  358 ataattagtctctgct 373  Q
    | ||||||||| ||||    
T  38485798 aaaattagtctttgct 38485813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 43933440 - 43933551
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| ||||||   |  ||| ||||||| ||| || |||  ||||||| || ||||||||| |||||||| ||| |||||    
T  43933440 ggttaaatatatttttagtccttacattttgtgcccgtttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatcttcgtta 43933539  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  43933540 tcaaaattagtc 43933551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 373
Target Start/End: Original strand, 4199446 - 4199569
Alignment:
Q  249 aatttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttc 348  Q
    |||||| |||||||||||||||| |||| || ||||||||  |||||  |||||| ||| ||||||  | |||||||| |||||||||  ||||||||      
T  4199446 aatttagggttaaatatgtttttggtccctacattttgcacgatttt-gagaatagtccttatatttcaataaatgtttttaaaatccctacatttttca 4199544  T
Q  349 tccgttatcataattagtctctgct 373  Q
    ||||||| | ||| ||||| |||||    
T  4199545 tccgttagcgtaaatagtccctgct 4199569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 27013469 - 27013521
Alignment:
Q  316 tattaaatgttcttaaaatccacacattttttctccgttatcataattagtct 368  Q
    ||||||||||| |||||||||  ||||||| |||||||||||| |||||||||    
T  27013469 tattaaatgtttttaaaatccttacattttatctccgttatcacaattagtct 27013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 34743560 - 34743444
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||| | ||||||||| | ||||| ||  ||| |||||| |||| || |||  |||||||||| | ||||||| |||||||| | |  ||||    
T  34743560 ggttaaatatgtatctagtccttacactttgcgtccctttgaagaattatccttacatttcattaaatgttttaaaaatcctcacattttatatatgtta 34743461  T
Q  356 tcataattagtctctgc 372  Q
    ||| |||||||||||||    
T  34743460 tcaaaattagtctctgc 34743444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 132149 - 132062
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacatt 343  Q
    |||||||||||| ||||||||||| ||||||||    ||| ||||||| ||| || |||  |||||||||| ||||||||| ||||||    
T  132149 ggttaaatatgtatttagtccttacattttgcactcctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatt 132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 367
Target Start/End: Original strand, 44504100 - 44504203
Alignment:
Q  264 atgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataatt 363  Q
    |||| |||||| |||| ||||||  ||  ||| ||||||| ||| || |||  ||||||| || ||||||||| |||||||| |||||||||||| ||||    
T  44504100 atgtctttagttcttacattttgtgtccatttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatctccgttatcaaaatt 44504199  T
Q  364 agtc 367  Q
    ||||    
T  44504200 agtc 44504203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 373
Target Start/End: Original strand, 50732224 - 50732342
Alignment:
Q  255 tggttaaatatgtttttagtccttatattttgca-tcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    |||| ||||||||||||  |||||| |||||||  || ||| ||| |||| |||||| |||  ||||||| || ||||||||| | |||||| |||||||    
T  50732224 tggtcaaatatgttttttatccttacattttgcgctcctttgaaa-aatagtccatacatttcattaaatatttttaaaatcctcgcattttatctccgt 50732322  T
Q  354 tatcataattagtctctgct 373  Q
    ||||| |||||||| |||||    
T  50732323 tatcaaaattagtccctgct 50732342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 373
Target Start/End: Complemental strand, 50780631 - 50780513
Alignment:
Q  255 tggttaaatatgtttttagtccttatattttgca-tcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgt 353  Q
    |||| ||||||||||||  |||||| |||||||  || ||| ||| |||| |||||| |||  ||||||| || ||||||||| | |||||| |||||||    
T  50780631 tggtcaaatatgttttttatccttacattttgcgctcctttgaaa-aatagtccatacatttcattaaatatttttaaaatcctcgcattttatctccgt 50780533  T
Q  354 tatcataattagtctctgct 373  Q
    ||||| |||||||| |||||    
T  50780532 tatcaaaattagtccctgct 50780513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 22814679 - 22814641
Alignment:
Q  248 gaatttatggttaaatatgtttttagtccttatattttg 286  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  22814679 gaatttagggttaaatatgtttttagtacttatattttg 22814641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 20831191 - 20831075
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || |||||   |||||||||  |||| ||| || |||  | |||||||| |||||||||  ||||||||| |||||||    
T  20831191 ggttaaatatgtttttggtccctacattttttctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacattttttatccgtta 20831092  T
Q  356 tcataattagtctctgc 372  Q
     || || ||||| ||||    
T  20831091 gcacaaatagtccctgc 20831075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 282
Target Start/End: Complemental strand, 50002085 - 50002057
Alignment:
Q  254 atggttaaatatgtttttagtccttatat 282  Q
    |||||||||||||||||||||||||||||    
T  50002085 atggttaaatatgtttttagtccttatat 50002057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 51755943 - 51755903
Alignment:
Q  317 attaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    |||||||||| ||||||||| |||||||| |||||||||||    
T  51755943 attaaatgtttttaaaatcctcacattttatctccgttatc 51755903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 28854677 - 28854785
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| ||||||||||||||  |  ||||||||||| ||| || ||| ||||||||||| ||||||||| |||||||| | || ||||    
T  28854677 ggttaaatatgtttttaatccttatattttgcgcccatttaaagaatactccctacattttattaaatgtttttaaaatcctcacattttatttcagtta 28854776  T
Q  356 tcataatta 364  Q
    ||| |||||    
T  28854777 tcaaaatta 28854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 348
Target Start/End: Original strand, 30938592 - 30938687
Alignment:
Q  253 tatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttc 348  Q
    |||| |||||||||||||||||||||| |||||||  |  |||||||||||||||||| ||| ||||||||||| ||||||| |  ||||||||||    
T  30938592 tatgattaaatatgtttttagtccttacattttgcgcctctttaaagaataatccatacattttattaaatgtttttaaaattcctacattttttc 30938687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 18152756 - 18152865
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||| ||| |||| |||||||  |  ||| ||||||| ||| || ||| | ||||||||||||||||||| |||||||| |||||||||    
T  18152756 ggttaaatatgttttcagttcttacattttgcgcccctttgaagaatagtccctacattttgttaaatgttcttaaaatcctcacattttatctccgtta 18152855  T
Q  356 tcataattag 365  Q
    ||| ||||||    
T  18152856 tcaaaattag 18152865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 20544398 - 20544290
Alignment:
Q  258 ttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatc 357  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||| ||| || |||  |||||||||| ||||||| | |||||||| ||| |||||||    
T  20544398 ttaaatatgtttttagtccttatattttgcacctttttgaagaatagtccttacatttcattaaatgtttttaaaat-ctcacattttatcttcgttatc 20544300  T
Q  358 ataattagtc 367  Q
    | ||| ||||    
T  20544299 aaaatcagtc 20544290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 366
Target Start/End: Complemental strand, 10466875 - 10466759
Alignment:
Q  250 atttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttct 349  Q
    ||||| ||||||||||||||||| || ||| ||||||| ||  ||| ||||||| ||  |||||| ||||||||||| ||||||||  |||||||| |||    
T  10466875 atttagggttaaatatgtttttaatctttacattttgcgtctatttgaagaatagtctctatattttattaaatgtttttaaaatcgtcacattttatct 10466776  T
Q  350 ccgttatcataattagt 366  Q
    || |||||| |||||||    
T  10466775 ccattatcaaaattagt 10466759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 17075219 - 17075330
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||||||||||||||||  |  ||| ||||||| ||| || |||  |||||| ||| ||||||||| |||||||| || ||||||    
T  17075219 ggttaaatatgtttttagtccttatattttgcgccgctttgaagaatagtccctacatttcattaaaagtttttaaaatcctcacattttatccccgtta 17075318  T
Q  356 tcataattagtc 367  Q
     || ||||||||    
T  17075319 acaaaattagtc 17075330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 28852693 - 28852808
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| |||||| ||||||  ||  |||||| |||| ||| || |||  |||||||||| ||||||||| |||||||| || ||||||    
T  28852693 ggttaaatatgtttttaatccttacattttgtgtccatttaaataatactccctacatttcattaaatgtttttaaaatcctcacattttatccccgtta 28852792  T
Q  356 tcataattagtctctg 371  Q
    ||| |||||| |||||    
T  28852793 tcaaaattagcctctg 28852808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 22948960 - 22948854
Alignment:
Q  264 atgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttatcataatt 363  Q
    |||||||||||||||| |||||||  |  ||| ||||||| ||  || |||  |||||||||| ||||||||| |||||||| |||||||||||| ||||    
T  22948960 atgtttttagtccttacattttgcgaccctttgaagaatagtctctacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaatt 22948861  T
Q  364 agtctct 370  Q
    |||||||    
T  22948860 agtctct 22948854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 367
Target Start/End: Complemental strand, 44803721 - 44803611
Alignment:
Q  257 gttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgttat 356  Q
    ||||||||||||||||||||||| |||||||     ||||||||||| ||  || |||  |||||||||| ||||||| | |||||||| ||||||||||    
T  44803721 gttaaatatgtttttagtccttacattttgcgcttctttaaagaatagtctctacatttcattaaatgtttttaaaattctcacattttatctccgttat 44803622  T
Q  357 cataattagtc 367  Q
    || ||||||||    
T  44803621 caaaattagtc 44803611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 28838520 - 28838604
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatc 335  Q
    |||| |||||||||||||||| |||| || ||||||||||||||| || |||||||| || ||| || |||||||| ||||||||    
T  28838520 tttaaggttaaatatgtttttggtccctacattttgcatcattttgaaaaataatccttacattttaataaatgtttttaaaatc 28838604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 17075707 - 17075596
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||| ||||||||||||| |||||||  |  ||| ||||||| ||| || |||  |||||||||| ||||||||| |||||||| |||||  ||    
T  17075707 ggttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccacta 17075608  T
Q  356 tcataattagtc 367  Q
    ||| ||||||||    
T  17075607 tcaaaattagtc 17075596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 16755727 - 16755619
Alignment:
Q  251 tttatggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctc 350  Q
    |||| ||||||||||||||||| |||| |||||||||  || ||| ||||||| ||  ||||||  ||||||| || ||||||||| || ||||||||||    
T  16755727 tttagggttaaatatgtttttaatcct-atattttgcgccactttgaagaatagtctctatatttcattaaatatttttaaaatcctcatattttttctc 16755629  T
Q  351 cgttatcata 360  Q
    ||||| ||||    
T  16755628 cgttaccata 16755619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 32092558 - 32092505
Alignment:
Q  317 attaaatgttcttaaaatccacacattttttctccgttatcataattagtctct 370  Q
    |||||||||| ||||||||| |||||||| |||||||||||| |||||||||||    
T  32092558 attaaatgtttttaaaatcctcacattttatctccgttatcaaaattagtctct 32092505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 32092228 - 32092340
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||||||||||| |||||||  |  ||| ||||||| ||| |  |||  |||||||||| ||||||||| |||||||| | |  ||||    
T  32092228 ggttaaatatgtttttagtccttacattttgcgcctctttgaagaatagtccctgcatttcattaaatgtttttaaaatcctcacattttgtgtttgtta 32092327  T
Q  356 tcataattagtct 368  Q
    ||| |||||||||    
T  32092328 tcaaaattagtct 32092340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 371
Target Start/End: Complemental strand, 11975093 - 11975038
Alignment:
Q  316 tattaaatgttcttaaaatccacacattttttctccgttatcataattagtctctg 371  Q
    ||||||||||| ||||||||| |||||||| | |||||||||| ||||||||||||    
T  11975093 tattaaatgtttttaaaatcctcacattttatttccgttatcaaaattagtctctg 11975038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 367
Target Start/End: Original strand, 28838413 - 28838463
Alignment:
Q  317 attaaatgttcttaaaatccacacattttttctccgttatcataattagtc 367  Q
    |||||||||| ||||||||| |||||||| |||||||||||| ||||||||    
T  28838413 attaaatgtttttaaaatcctcacattttatctccgttatcaaaattagtc 28838463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 20543911 - 20544028
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||| | |||| ||||||   |  ||| ||||||| ||| || |||  ||||||| || ||||||||| || ||||| |||||||||    
T  20543911 ggttaaatatgtttttaattcttacattttgtgcccctttgaagaatagtccctacatttcattaaatttttttaaaatcctcatattttatctccgtta 20544010  T
Q  356 tcataattagtctctgct 373  Q
    ||| ||||||| ||||||    
T  20544011 tcaaaattagtttctgct 20544028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 4152720 - 4152836
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||||||||| | || | ||| |   ||||||||||||||||| || ||| |||| |||||| |||||||||  ||||||||   ||||||    
T  4152720 ggttaaatatgtttttagttcctacagtttacgcaattttaaagaataatccctacattttattgaatgtttttaaaatccctacatttttctaccgtta 4152819  T
Q  356 tcataattagtctctgc 372  Q
     || |||| ||||||||    
T  4152820 acaaaattggtctctgc 4152836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 23548054 - 23548085
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgc 287  Q
    ||||||||||||||||||||||||||||||||    
T  23548054 ggttaaatatgtttttagtccttatattttgc 23548085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 33084 - 32968
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    |||||||||||||||| |||| || ||||||| |||||||||  |||| ||| || |||  | |||||||| |||||||||  ||||||||| |||||||    
T  33084 ggttaaatatgtttttggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacattttttatccgtta 32985  T
Q  356 tcataattagtctctgc 372  Q
     || || ||||| ||||    
T  32984 gcacaaatagtccctgc 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 29274 - 29390
Alignment:
Q  256 ggttaaatatgtttttagtccttatattttgcatcattttaaagaataatccatatattatattaaatgttcttaaaatccacacattttttctccgtta 355  Q
    ||||||||||||| || |||| || ||||||| |||||||||  |||| ||| || |||  | |||||||| |||||||||  ||||||||  |||||||    
T  29274 ggttaaatatgttattggtccctacattttgcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgtta 29373  T
Q  356 tcataattagtctctgc 372  Q
     || || ||||| ||||    
T  29374 gcacaaatagtccctgc 29390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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