View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4925_high_4 (Length: 361)

Name: NF4925_high_4
Description: NF4925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4925_high_4
NF4925_high_4
[»] chr4 (27 HSPs)
chr4 (12-126)||(29691525-29691639)
chr4 (15-125)||(3296544-3296654)
chr4 (15-126)||(48553896-48554007)
chr4 (15-133)||(30608612-30608730)
chr4 (9-126)||(51906792-51906909)
chr4 (15-126)||(7118143-7118254)
chr4 (15-125)||(34129279-34129389)
chr4 (9-126)||(35166839-35166956)
chr4 (9-101)||(30608270-30608362)
chr4 (15-131)||(51906415-51906531)
chr4 (15-126)||(3296923-3297034)
chr4 (27-126)||(54143492-54143591)
chr4 (27-126)||(54167494-54167593)
chr4 (9-115)||(26168004-26168109)
chr4 (24-126)||(38759704-38759806)
chr4 (18-126)||(48760097-48760205)
chr4 (15-122)||(56106440-56106547)
chr4 (36-126)||(54168823-54168913)
chr4 (27-128)||(54142323-54142424)
chr4 (10-126)||(47058481-47058597)
chr4 (9-66)||(1791521-1791578)
chr4 (25-118)||(26984152-26984245)
chr4 (9-126)||(28505209-28505325)
chr4 (27-131)||(789890-789993)
chr4 (79-131)||(3296814-3296866)
chr4 (14-126)||(34128994-34129106)
chr4 (10-126)||(47053761-47053877)
[»] chr8 (18 HSPs)
chr8 (297-361)||(44000496-44000560)
chr8 (9-126)||(9800039-9800156)
chr8 (9-126)||(26997842-26997959)
chr8 (15-126)||(17914197-17914308)
chr8 (17-126)||(13315202-13315311)
chr8 (15-126)||(10047479-10047589)
chr8 (15-119)||(6297841-6297945)
chr8 (18-126)||(7344838-7344946)
chr8 (19-123)||(26243378-26243482)
chr8 (15-125)||(6297463-6297573)
chr8 (9-126)||(17915480-17915596)
chr8 (35-126)||(4624533-4624624)
chr8 (26-128)||(12489517-12489618)
chr8 (15-125)||(44148578-44148688)
chr8 (19-66)||(21006105-21006152)
chr8 (27-126)||(29917529-29917627)
chr8 (15-121)||(44024230-44024336)
chr8 (97-133)||(4694493-4694529)
[»] scaffold0009 (1 HSPs)
scaffold0009 (9-133)||(108095-108219)
[»] chr5 (24 HSPs)
chr5 (14-125)||(87239-87350)
chr5 (15-125)||(16284275-16284385)
chr5 (18-126)||(18999622-18999730)
chr5 (15-126)||(18999366-18999477)
chr5 (14-128)||(8648043-8648157)
chr5 (15-126)||(31176507-31176618)
chr5 (15-125)||(8750339-8750449)
chr5 (9-126)||(31588319-31588437)
chr5 (9-124)||(13987284-13987400)
chr5 (46-126)||(22231170-22231250)
chr5 (13-126)||(14625122-14625234)
chr5 (15-126)||(3406839-3406949)
chr5 (9-126)||(3191798-3191914)
chr5 (46-126)||(119184-119264)
chr5 (11-66)||(3935450-3935505)
chr5 (21-132)||(14626074-14626185)
chr5 (12-138)||(8749998-8750124)
chr5 (96-126)||(15978389-15978419)
chr5 (50-131)||(18339314-18339395)
chr5 (38-126)||(87019-87107)
chr5 (9-85)||(3935667-3935743)
chr5 (101-129)||(29959175-29959203)
chr5 (17-61)||(30415465-30415509)
chr5 (101-137)||(34448483-34448519)
[»] chr1 (23 HSPs)
chr1 (15-126)||(18180257-18180368)
chr1 (9-126)||(31436356-31436473)
chr1 (12-126)||(18179879-18179993)
chr1 (15-126)||(9880484-9880595)
chr1 (9-126)||(3591310-3591427)
chr1 (9-126)||(5683534-5683651)
chr1 (9-126)||(50359412-50359529)
chr1 (8-128)||(48154972-48155091)
chr1 (16-126)||(42723235-42723349)
chr1 (14-126)||(19895400-19895512)
chr1 (9-131)||(9880763-9880885)
chr1 (9-126)||(6751326-6751444)
chr1 (36-133)||(1500981-1501078)
chr1 (9-126)||(5683161-5683278)
chr1 (17-126)||(50359125-50359234)
chr1 (27-126)||(36792240-36792338)
chr1 (27-126)||(36793565-36793664)
chr1 (12-126)||(45664687-45664801)
chr1 (18-128)||(4288422-4288527)
chr1 (15-124)||(6751049-6751158)
chr1 (15-63)||(47541803-47541851)
chr1 (95-126)||(47542078-47542109)
chr1 (37-117)||(47541527-47541607)
[»] chr2 (24 HSPs)
chr2 (14-131)||(2517408-2517525)
chr2 (15-127)||(2191216-2191328)
chr2 (14-126)||(39729584-39729696)
chr2 (15-126)||(3691368-3691479)
chr2 (21-126)||(18107410-18107515)
chr2 (10-126)||(21217295-21217411)
chr2 (10-126)||(21264991-21265107)
chr2 (11-126)||(21182307-21182422)
chr2 (10-115)||(3691094-3691199)
chr2 (15-124)||(24093535-24093644)
chr2 (27-126)||(2035608-2035707)
chr2 (15-126)||(21216923-21217034)
chr2 (15-126)||(21265368-21265479)
chr2 (17-126)||(32860814-32860923)
chr2 (15-126)||(24093156-24093267)
chr2 (9-126)||(39096930-39097046)
chr2 (27-126)||(10709475-10709574)
chr2 (15-126)||(32114450-32114561)
chr2 (27-126)||(39096524-39096622)
chr2 (50-124)||(2191392-2191466)
chr2 (79-125)||(7083792-7083838)
chr2 (26-123)||(7083525-7083622)
chr2 (75-131)||(7083690-7083746)
chr2 (9-65)||(10706624-10706680)
[»] scaffold0063 (2 HSPs)
scaffold0063 (9-124)||(34794-34909)
scaffold0063 (16-125)||(35172-35281)
[»] chr6 (9 HSPs)
chr6 (15-126)||(5974011-5974122)
chr6 (37-126)||(8710341-8710430)
chr6 (18-126)||(1869451-1869559)
chr6 (10-124)||(25932359-25932476)
chr6 (37-126)||(211441-211530)
chr6 (9-65)||(21113090-21113146)
chr6 (17-131)||(4510183-4510298)
chr6 (9-125)||(14712979-14713095)
chr6 (46-126)||(19595659-19595739)
[»] chr3 (20 HSPs)
chr3 (18-131)||(44504368-44504481)
chr3 (9-126)||(22814296-22814413)
chr3 (11-126)||(51471335-51471450)
chr3 (11-131)||(9218489-9218608)
chr3 (18-133)||(25770314-25770429)
chr3 (15-129)||(13637759-13637873)
chr3 (15-123)||(37172084-37172192)
chr3 (9-124)||(38485699-38485813)
chr3 (15-126)||(43933440-43933551)
chr3 (9-133)||(4199446-4199569)
chr3 (14-66)||(27013469-27013521)
chr3 (10-126)||(34743444-34743560)
chr3 (39-126)||(132062-132149)
chr3 (15-118)||(44504100-44504203)
chr3 (9-127)||(50732224-50732342)
chr3 (9-127)||(50780513-50780631)
chr3 (96-134)||(22814641-22814679)
chr3 (10-126)||(20831075-20831191)
chr3 (100-128)||(50002057-50002085)
chr3 (25-65)||(51755903-51755943)
[»] chr7 (19 HSPs)
chr7 (18-126)||(28854677-28854785)
chr7 (34-129)||(30938592-30938687)
chr7 (17-126)||(18152756-18152865)
chr7 (15-124)||(20544290-20544398)
chr7 (16-132)||(10466759-10466875)
chr7 (15-126)||(17075219-17075330)
chr7 (11-126)||(28852693-28852808)
chr7 (12-118)||(22948854-22948960)
chr7 (15-125)||(44803611-44803721)
chr7 (47-131)||(28838520-28838604)
chr7 (15-126)||(17075596-17075707)
chr7 (22-131)||(16755619-16755727)
chr7 (12-65)||(32092505-32092558)
chr7 (14-126)||(32092228-32092340)
chr7 (11-66)||(11975038-11975093)
chr7 (15-65)||(28838413-28838463)
chr7 (9-126)||(20543911-20544028)
chr7 (10-126)||(4152720-4152836)
chr7 (95-126)||(23548054-23548085)
[»] scaffold0148 (2 HSPs)
scaffold0148 (10-126)||(32968-33084)
scaffold0148 (10-126)||(29274-29390)


Alignment Details
Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 29691639 - 29691525
Alignment:
Q  12 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 111  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  ||||||||||||||||||||    
T  29691639 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggacta 29691540  T
Q  112 aaaacatatttaacc 126  Q
    |||||||||||||||    
T  29691539 aaaacatatttaacc 29691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 3296654 - 3296544
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  3296654 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaa 3296555  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  3296554 acatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 48554007 - 48553896
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||  ||||||  ||| |||||| ||||||| |||  || ||||||| ||||||||||||    
T  48554007 gactaattttgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaa 48553908  T
Q  115 acatatttaacc 126  Q
    || |||||||||    
T  48553907 acgtatttaacc 48553896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 30608612 - 30608730
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||||||  || ||||||| |||  |   |||||| ||||| ||||||    
T  30608612 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagaggcacaaaatgtaaggtctaaaa 30608711  T
Q  115 acatatttaaccataaatt 133  Q
    |||||||||||| ||||||    
T  30608712 acatatttaaccctaaatt 30608730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 51906792 - 51906909
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||| ||||||| |||||||||||| |||||||| ||||||||| ||||||||||   || || ||| ||||||| |||     ||||||| ||||||    
T  51906792 agcagaaactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaagga 51906891  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||||||||||||||||    
T  51906892 ctaaaaacatatttaacc 51906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 7118143 - 7118254
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||| ||||| ||||| || | ||||||| ||||||||||  ||| |||||| ||||||| |||  |  ||||||| ||||||||||||    
T  7118143 gactaattttgataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaa 7118242  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  7118243 acatatttaacc 7118254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 34129279 - 34129389
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| ||||||| |||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| ||| || |||||||| ||||| || |||    
T  34129279 gactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaa 34129378  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  34129379 acatatttaac 34129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 35166839 - 35166956
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  |||    |||||||| ||  ||  || ||||||| |||| |    
T  35166839 agcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgctgggattatttttcgaagggacgcaaaatgtaagca 35166938  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||| ||||||||||||    
T  35166939 ctaaagacatatttaacc 35166956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 30608362 - 30608270
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaat 101  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| || || ||||  ||| || ||| ||||||| ||||||| |||||||    
T  30608362 agcagagactaattttgataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaaatgacgcaaaat 30608270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 51906531 - 51906415
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| |||| |||| ||||||||||  ||  || ||| ||||||| |||  |  ||||||| ||| ||||||||    
T  51906531 gactaattttgataacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagactaaaa 51906432  T
Q  115 acatatttaaccataaa 131  Q
    |||||||||||| ||||    
T  51906431 acatatttaaccctaaa 51906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 3296923 - 3297034
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||  ||||||||| ||||||||||  ||  || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  3296923 gactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaa 3297022  T
Q  115 acatatttaacc 126  Q
    | ||||||||||    
T  3297023 atatatttaacc 3297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 54143492 - 54143591
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||| |||||||  ||||||||| |||||||| || ||| || ||| ||||||| ||| |  ||||||||||| ||||||| |||||||||||||    
T  54143492 taacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaacc 54143591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 54167593 - 54167494
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||| ||||||||  ||||||||| |||||||| |  |||||| ||| ||||||| ||||| | ||||||| || ||||| |||||||||||||||    
T  54167593 taacggagtaaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaacc 54167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 26168109 - 26168004
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| || |||||||| ||| ||   | |||||||||||| |  ||||||| ||| ||    
T  26168109 agcagagactaattttgataacggagataaaatgtgaggattttaaaaatatttaata-aatgtagaaactattctttaaaagggcgcaaaatgtaatga 26168011  T
Q  109 ctaaaaa 115  Q
    |||||||    
T  26168010 ctaaaaa 26168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 38759806 - 38759704
Alignment:
Q  24 tgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatattta 123  Q
    |||||||||||| ||||| || ||||||||| ||||||||||  ||| ||| || ||||||| |||  |  ||||||| ||||||||||||| |||||||    
T  38759806 tgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatattta 38759707  T
Q  124 acc 126  Q
    |||    
T  38759706 acc 38759704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 48760097 - 48760205
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| ||||||| |||| ||||||||  |||||||| ||||||||||  | | || | | ||||||| |||| || ||| |||||||| ||||||||||    
T  48760097 taattttgataacagagataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaaaagacgcacaatataagaactaaaaaca 48760196  T
Q  118 tatttaacc 126  Q
    |||||||||    
T  48760197 tatttaacc 48760205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 56106440 - 56106547
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| | |||||||||| |||||| | ||||||||| ||||||||||| |||||| | | ||||||| |||  |   |||||| ||| ||||||||    
T  56106440 gactaattttaataacggagataaaatgagaggattttaaaaacatttaataaaatataggaactattcttcaaaggggcacaaaatgtaaagactaaaa 56106539  T
Q  115 acatattt 122  Q
    ||||||||    
T  56106540 acatattt 56106547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 54168823 - 54168913
Alignment:
Q  36 aaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||  ||||||||| || ||||| || ||| || ||||||||||| ||| | | |||||||||| ||| |||||||||||||||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaacc 54168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 54142424 - 54142323
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||| |||||||  ||||||||| |||||||| |  ||| |||||| ||||||| ||| |   ||||||| || ||||||| |||||||||||||    
T  54142424 taacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaacc 54142325  T
Q  127 at 128  Q
    ||    
T  54142324 at 54142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 47058481 - 47058597
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| ||||| || || ||||||| |||||||||  ||||||||| |||||||| |  ||| ||  || ||||  ||||||||| ||||||| || ||||    
T  47058481 gcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggac 47058580  T
Q  110 taaaaacatatttaacc 126  Q
     ||||||||||||||||    
T  47058581 caaaaacatatttaacc 47058597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 1791521 - 1791578
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 66  Q
    |||||||||||||| | |||||||||| |||||||   |||||||| |||||||||||    
T  1791521 agcagagactaattttaataacggagataaaatgtaaagattttaaaaacatttaata 1791578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 26984245 - 26984152
Alignment:
Q  25 gataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacat 118  Q
    |||||| |||| |||||||| ||||||||| ||||||||||| | | || ||| ||||||| |||  |  |||||||||||  |||||||||||    
T  26984245 gataactgagataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaagaggcgcaaaatataaaaactaaaaacat 26984152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 28505325 - 28505209
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| ||||| ||| | |||||||| ||||||||  ||||||||| |||||||| |  ||| || ||| ||||||  |||||  |||||||| || |||    
T  28505325 agcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctc-aaaatcgtgcaaaatgtaggga 28505227  T
Q  109 ctaaaaacatatttaacc 126  Q
    | ||||||||||||||||    
T  28505226 ccaaaaacatatttaacc 28505209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 789993 - 789890
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||||||||||||  ||||||||| |||||| | |  ||| |||||| |||| || |||||   ||||||| || |||| ||||||||||||||||    
T  789993 taacggagaaaaaatgtagggattttaaaaacattcattgaaatgtatggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacc 789895  T
Q  127 ataaa 131  Q
     ||||    
T  789894 ctaaa 789890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 3296814 - 3296866
Alignment:
Q  79 tattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 131  Q
    ||||||||||| | | |||||||||| |||| |||||||||||||||| ||||    
T  3296814 tattctttaaagtcacgcaaaatatatggaccaaaaacatatttaaccttaaa 3296866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 34129106 - 34128994
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    ||||||| | |||||||| ||| ||||| || | ||||||| ||| ||||||| |||||| ||| ||||||| |||  || ||||||| |||  | || |    
T  34129106 agactaactttgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagggacgcaaaatgtaattattaga 34129007  T
Q  114 aacatatttaacc 126  Q
    |||||||||||||    
T  34129006 aacatatttaacc 34128994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 47053877 - 47053761
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| ||||| || || |||||||  ||||||||  ||||||||| |||||||| |  ||| || ||| ||||  ||||||||| ||||||| || ||||    
T  47053877 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggac 47053778  T
Q  110 taaaaacatatttaacc 126  Q
     || |||||||||||||    
T  47053777 caataacatatttaacc 47053761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 44000560 - 44000496
Alignment:
Q  297 ttaagaaaaatggatatatttagcaaattacatttatgtctttgtgagtaatattactttgccct 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44000560 ttaagaaaaatggatatatttagcaaattacatttatgtctttgtgagtaatattactttgccct 44000496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 9800156 - 9800039
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||| ||||||||| ||||||||||||  ||||||| ||||||||| ||||||||||| ||| || ||||||||||| |||  |  ||||||| ||||||    
T  9800156 agcaaagactaattttgataacggagatgaaatgtgaggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaagga 9800057  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||||||||||||||||    
T  9800056 ctaaaaacatatttaacc 9800039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 26997842 - 26997959
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| |||||||| |||||||||||| |||||||| ||||||||| || | |||||  ||| |||||| ||||||| |||  || ||||||| |||| |    
T  26997842 agcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaagaa 26997941  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||||||||||||||||    
T  26997942 ctaaaaacatatttaacc 26997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 17914308 - 17914197
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| ||||||| |||| |||||||| ||||||||| ||||||||||| ||| || ||| ||||||| |||  || ||||||| ||| |||| |||    
T  17914308 gactaattttgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaa 17914209  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  17914208 acatatttaacc 17914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 13315311 - 13315202
Alignment:
Q  17 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 116  Q
    |||||| ||||||| |||| ||||||||  |||||||| ||||||||||  ||| || ||| |||||||||||  |  ||||||| ||||||||||||||    
T  13315311 ctaattttgataacagagataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaac 13315212  T
Q  117 atatttaacc 126  Q
    ||||||||||    
T  13315211 atatttaacc 13315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 10047589 - 10047479
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| | ||||||| ||||||||||  ||| || ||| ||||||| |||| |  ||||||| |||||| |||||    
T  10047589 gactaattttgataacggagataaaatgtgagaattttaaaaacatttaat-gaatgtagggactattcttcaaaagggcgcaaaatgtaaggattaaaa 10047491  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  10047490 acatatttaacc 10047479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 6297841 - 6297945
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| ||| | | ||||||| || |||| ||||    
T  6297841 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaa 6297940  T
Q  115 acata 119  Q
    |||||    
T  6297941 acata 6297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 7344838 - 7344946
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| |||||||||| | ||||| || ||||||||| ||||| ||||| ||| |||||||||||||| |||  |   |||||| |||||||||||||||    
T  7344838 taattttgataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaaggggcacaaaatgtaaggactaaaaaca 7344937  T
Q  118 tatttaacc 126  Q
    ||| |||||    
T  7344938 tatataacc 7344946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 26243378 - 26243482
Alignment:
Q  19 aattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacat 118  Q
    |||| |||||| ||||| |||||||| ||||||||| ||||||||||  ||||||  || ||||||| |||     ||||||||||||||||||||||||    
T  26243378 aattttgataatggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggagcgcaaaatataaggactaaaaacat 26243477  T
Q  119 attta 123  Q
    |||||    
T  26243478 attta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 6297573 - 6297463
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| ||||||| |||| |||||||| ||||||||| ||||||||||  ||| || | | ||||||| |||  |  ||||||| |||||||||||     
T  6297573 gactaattttgataacagagagaaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaag 6297474  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  6297473 acatatttaac 6297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 17915480 - 17915596
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||| ||||||||| ||||||| |||| |||||||| |||||| || ||||||||||| ||| || ||| ||||||| |||      |||||| ||||||    
T  17915480 agcaaagactaattttgataacagagataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaagga 17915578  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||||||||||||||||    
T  17915579 ctaaaaacatatttaacc 17915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 4624624 - 4624533
Alignment:
Q  35 aaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||||  ||||||||| |||||||| |  ||| ||  || ||||||| ||| | ||||||||||||||||| ||||||||||||||||    
T  4624624 aaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaacc 4624533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 12489517 - 12489618
Alignment:
Q  26 ataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaac 125  Q
    ||||| |||| |||||||  ||||||||| |||||| |||  ||| || ||| ||||||| | || || ||||||| |||||||||||||||||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaacatt-aatgaaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaac 12489615  T
Q  126 cat 128  Q
    |||    
T  12489616 cat 12489618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 44148688 - 44148578
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    ||||| || ||||||||||| ||||||||| ||||||||| ||| |||| || ||| || ||| ||||||| ||||    | ||||| || |||||||||    
T  44148688 gactatttttgataacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaa 44148589  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  44148588 acatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 21006105 - 21006152
Alignment:
Q  19 aattatgataacggagaaaaaatgtgtggattttaagaacatttaata 66  Q
    |||| |||||||||||| |||||||| ||||||||| |||||||||||    
T  21006105 aattttgataacggagataaaatgtgaggattttaaaaacatttaata 21006152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 29917529 - 29917627
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||||||||||||  ||||||||| |||||||| |  ||| || ||| ||||| | |||||  |||||||| || |||| ||||||||||||||||    
T  29917529 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggaccaaaaacatatttaacc 29917627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 44024336 - 44024230
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataaggactaaa 113  Q
    |||||||| ||||||||| || ||||||||  |||||||| |||||||  |  ||| |||||| ||||||| ||| ||| |||||||| |||||||||||    
T  44024336 gactaattttgataacggggataaaatgtgatgattttaaaaacatttggtgaaatgtatggactattcttcaaa-tgagtgcaaaatttaaggactaaa 44024238  T
Q  114 aacatatt 121  Q
    || |||||    
T  44024237 aatatatt 44024230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 4694493 - 4694529
Alignment:
Q  97 aaaatataaggactaaaaacatatttaaccataaatt 133  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  4694493 aaaatatagggactaaaaacatatttaaccctaaatt 4694529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 108095 - 108219
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || | || |||||| |||| |  ||||||| ||||||    
T  108095 agcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaggaataattcttcaaaagggcgcaaaatgtaagga 108194  T
Q  109 ctaaaaacatatttaaccataaatt 133  Q
    |||||||||||||||| | ||||||    
T  108195 ctaaaaacatatttaatcctaaatt 108219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 87239 - 87350
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    ||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  ||  ||||||||||||||||||    
T  87239 agactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaa 87338  T
Q  114 aacatatttaac 125  Q
    ||||||||||||    
T  87339 aacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 16284385 - 16284275
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| ||||| || ||||||||| ||||||||||| ||||||  || ||||||| ||||  | ||||||| ||||||||||||    
T  16284385 gactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaa 16284286  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  16284285 acatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 18999622 - 18999730
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| |||||||  ||| |||||||| ||||||||| || |||||||  ||| |||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  18999622 taattttgataacaaagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaaca 18999721  T
Q  118 tatttaacc 126  Q
    |||||||||    
T  18999722 tatttaacc 18999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 18999477 - 18999366
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||| | ||||||||| || |||||||  ||| |||||| ||||||| ||||   |||||||| ||||||||||||    
T  18999477 gactaattttgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaa 18999378  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  18999377 acatatttaacc 18999366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 8648043 - 8648157
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    ||||||||| ||||||||||||||||||||| ||||||||| || |||||||  ||| ||  || |||||||  ||| || ||||||| |||||||||||    
T  8648043 agactaattttgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaa 8648142  T
Q  114 aacatatttaaccat 128  Q
    | |||||||||||||    
T  8648143 atcatatttaaccat 8648157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 31176618 - 31176507
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| ||||||||| || ||||| ||  |||||||| ||||||||||  ||| |||||| | ||||| |||  || ||||||||||||||||||||    
T  31176618 gactaattttgataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaa 31176519  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  31176518 acatatttaacc 31176507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 8750339 - 8750449
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| ||||| || |||||||||  |||||||||| ||| || ||| ||||||| |||   | ||||||| ||||||||||||    
T  8750339 gactaattttgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaa 8750438  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  8750439 acatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 31588319 - 31588437
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaa-atgatgcaaaatataagg 107  Q
    ||||| |||||||| |||||||||||| |||||||  ||||||||| || |||||||  ||| || ||| ||||||| |||   || ||||||| |||||    
T  31588319 agcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaagg 31588418  T
Q  108 actaaaaacatatttaacc 126  Q
    |||||||||||||||||||    
T  31588419 actaaaaacatatttaacc 31588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 13987400 - 13987284
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggatttt-aagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagg 107  Q
    |||||||||||||| | |||||||||| |||||||| | ||||| || ||||||||||  ||||||  |||||||||| |||| |  || |||| ||||     
T  13987400 agcagagactaattttaataacggagataaaatgtgagaattttaaaaaacatttaatgaaatatagagattattcttcaaaagggcgcgaaatgtaaga 13987301  T
Q  108 actaaaaacatatttaa 124  Q
    |||||||||||||||||    
T  13987300 actaaaaacatatttaa 13987284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 22231170 - 22231250
Alignment:
Q  46 ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||| || ||||||||||  |||||| ||| |||||||||||  |  ||||||||||||||||||||||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggactaaaaacatatttaacc 22231250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 14625234 - 14625122
Alignment:
Q  13 gagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaa 112  Q
    ||||||| |||||||||||||| ||||||||  ||||||||| |||||||| || ||| |||||| || | ||||||||   | ||||| || |||| ||    
T  14625234 gagactatttatgataacggaggaaaaatgtagggattttaaaaacatttattaaaatttatggacta-tatttaaaattgcgtaaaatgtagggaccaa 14625136  T
Q  113 aaacatatttaacc 126  Q
    ||||||||||||||    
T  14625135 aaacatatttaacc 14625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 3406839 - 3406949
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| ||||||| |||| |||||||| | ||||||| || |||||||| |||||  | | ||||||| |||| |  |||||||||||  |||||||    
T  3406839 gactaattttgataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaactattcttcaaaaaggcgcaaaatataa-aactaaaa 3406937  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  3406938 acatatttaacc 3406949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 3191914 - 3191798
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| ||||| ||| | |||||||| ||||||||  ||||||||| |||||||| |  ||| || ||| ||||||  |||||  |||||||| || |||    
T  3191914 agcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctc-aaaatcgtgcaaaatgtaggga 3191816  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||||||||||||||||    
T  3191815 ctaaaaacatatttaacc 3191798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 119264 - 119184
Alignment:
Q  46 ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||| |||||||| |  ||| || ||| ||||||||||| | | ||||||| ||||||| ||||||||||||||||    
T  119264 ggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaacc 119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 3935505 - 3935450
Alignment:
Q  11 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 66  Q
    |||||||||||  |||||| ||||| |||||||| ||||||||| |||||||||||    
T  3935505 cagagactaatattgataatggagataaaatgtgaggattttaaaaacatttaata 3935450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 14626074 - 14626185
Alignment:
Q  21 ttatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatat 120  Q
    |||||||||| || |||||||||  ||||||||| |||||||| |  ||| || ||| |||| |||||| |   ||||| |||| |||| ||||||||||    
T  14626074 ttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatagggaccaaaaacatat 14626173  T
Q  121 ttaaccataaat 132  Q
    ||||||| ||||    
T  14626174 ttaaccaaaaat 14626185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 8750124 - 8749998
Alignment:
Q  12 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 111  Q
    ||||||||||| |||||||| ||| |||| ||   |||||||| || |||||||  ||| || |||||||| || |||  |  ||||||| |||| | ||    
T  8750124 agagactaattttgataacgaagataaaacgttacgattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaaatgtaagaatta 8750025  T
Q  112 aaaacatatttaaccataaattcaatc 138  Q
    ||||||||||||||| |||| ||||||    
T  8750024 aaaacatatttaaccctaaaatcaatc 8749998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 126
Target Start/End: Complemental strand, 15978419 - 15978389
Alignment:
Q  96 caaaatataaggactaaaaacatatttaacc 126  Q
    |||||||||||||||||||||||||||||||    
T  15978419 caaaatataaggactaaaaacatatttaacc 15978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 18339314 - 18339395
Alignment:
Q  50 tttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 131  Q
    ||||| |||||||| || ||| || ||||||||||| ||||| | | ||||| ||||||| ||||| |||||||||| ||||    
T  18339314 tttaaaaacatttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaaccctaaa 18339395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 87107 - 87019
Alignment:
Q  38 aaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||  |||||||| ||||||||||  ||| || || |||||||| | |   | ||||||||||| ||||||||||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttcagatgaacgcaaaatataaagactaaaaacatatttaacc 87019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 3935667 - 3935743
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctt 85  Q
    |||||||||||||| | |||||  ||| |||||||| ||||||||| |||| |||||  ||| || |||||||||||    
T  3935667 agcagagactaattttaataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggattattctt 3935743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 29959175 - 29959203
Alignment:
Q  101 tataaggactaaaaacatatttaaccata 129  Q
    |||||||||||||||||||||||||||||    
T  29959175 tataaggactaaaaacatatttaaccata 29959203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 30415465 - 30415509
Alignment:
Q  17 ctaattatgataacggagaaaaaatgtgtggattttaagaacatt 61  Q
    |||||| |||||||||||| |||||||| ||||||||| ||||||    
T  30415465 ctaattttgataacggagacaaaatgtgaggattttaaaaacatt 30415509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 34448519 - 34448483
Alignment:
Q  101 tataaggactaaaaacatatttaaccataaattcaat 137  Q
    |||||||||||||||||||||||||| |||| |||||    
T  34448519 tataaggactaaaaacatatttaaccctaaaatcaat 34448483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 18180257 - 18180368
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| ||||| || ||||||||| ||||||||||| ||| |||||| ||||||| ||| ||  ||||||||||| || |||||    
T  18180257 gactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaagattaaaa 18180356  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  18180357 acatatttaacc 18180368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 31436356 - 31436473
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| |||||||||||| ||||||||   ||||||| ||||||||||| ||||||  || ||||||| |||| ||  |||||| ||||||    
T  31436356 agcagagactaattttgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatgtaagga 31436455  T
Q  109 ctaaaaacatatttaacc 126  Q
    |||||| |||||||||||    
T  31436456 ctaaaatcatatttaacc 31436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 18179993 - 18179879
Alignment:
Q  12 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 111  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| |||| |||||  |||||| ||| |||| || |||  | |||||||| |||||||||    
T  18179993 agagactaattttgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggacta 18179894  T
Q  112 aaaacatatttaacc 126  Q
    ||||||| |||||||    
T  18179893 aaaacatgtttaacc 18179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 9880595 - 9880484
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||| ||| |||||||| ||||||||| ||||||||||  ||| ||  || | ||||| |||  |||||||||| ||||||||||||    
T  9880595 gactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaa 9880496  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  9880495 acatatttaacc 9880484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 3591310 - 3591427
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 107  Q
    ||||| |||||||| | |||| ||||| |||||||| ||||||||| ||||||||||| ||| |||||| ||||| || ||||||  ||||||| |||||    
T  3591310 agcagggactaatttttataatggagataaaatgtgaggattttaaaaacatttaataaaatgtatggactattc-ttcaaatgagcgcaaaatgtaagg 3591408  T
Q  108 actaaaaacatatttaacc 126  Q
    |||||||| ||||||||||    
T  3591409 actaaaaatatatttaacc 3591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 5683534 - 5683651
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| |||||||| ||||| |||||| |||||  | ||||||||| || |||||||  ||| || ||| ||||||| |||| || | ||||||||||||    
T  5683534 agcagtgactaattttgataccggagataaaatacgaggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataagga 5683633  T
Q  109 ctaaaaacatatttaacc 126  Q
    ||||||||||||||||||    
T  5683634 ctaaaaacatatttaacc 5683651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 50359412 - 50359529
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| ||||||| |||| |||||||| ||||||||| ||||||||||  |||| | ||| ||||||| |||  |  ||||||| ||||||    
T  50359412 agcagagactaattttgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttcaaatgggcgcaaaatgtaagga 50359511  T
Q  109 ctaaaaacatatttaacc 126  Q
     || ||||||||||||||    
T  50359512 atataaacatatttaacc 50359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 48155091 - 48154972
Alignment:
Q  8 gagcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagg 107  Q
    ||||||||| ||||| ||||| |||||| ||||| || ||||||||| ||||||||||| ||| || ||| ||||||| |||  |  | |||||||||||    
T  48155091 gagcagagattaattttgatatcggagataaaatatgaggattttaaaaacatttaataaaatgtaaggactattctt-aaagcggcgtaaaatataagg 48154993  T
Q  108 actaaaaacatatttaaccat 128  Q
    | |||||||||||||||||||    
T  48154992 attaaaaacatatttaaccat 48154972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 42723235 - 42723349
Alignment:
Q  16 actaattatgataacggagaaaaaatgtgtggattttaagaacatttaata----taatatatggattattctttaaaatgatgcaaaatataaggacta 111  Q
    ||||||| || ||||||| | |||||||| ||||||||| |||||||||||     |||||||| |||||||||||||     |||||||||||||| ||    
T  42723235 actaattttgctaacggatataaaatgtgaggattttaaaaacatttaataaattaaatatatgaattattctttaaaggagcgcaaaatataaggatta 42723334  T
Q  112 aaaacatatttaacc 126  Q
    |||||||||||||||    
T  42723335 aaaacatatttaacc 42723349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 19895512 - 19895400
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    ||||||||| |||||||||||| |||||||| || |||||| ||||||||||  ||| |||||| ||||||| |||       ||||| |||||||||||    
T  19895512 agactaattttgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattcttcaaacgagcataaaatgtaaggactaaa 19895413  T
Q  114 aacatatttaacc 126  Q
    |||||||||||||    
T  19895412 aacatatttaacc 19895400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 9880763 - 9880885
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 107  Q
    ||||| |||||||| ||||||| |||| |||||||| | ||||||| ||||||||||| ||||||   | ||||| || ||||||  ||||||| ||||     
T  9880763 agcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattc-ttcaaatgagcgcaaaatgtaaga 9880861  T
Q  108 actaaaaacatatttaaccataaa 131  Q
    | ||||||||||||||||||||||    
T  9880862 attaaaaacatatttaaccataaa 9880885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 6751326 - 6751444
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatg-caaaatataagg 107  Q
    |||||||||||||| |||||||  ||| |||||||| ||||||||| || |||||||  ||| || ||| | |||||||||  || | |||||| ||| |    
T  6751326 agcagagactaattttgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaagggacgccaaaatgtaatg 6751425  T
Q  108 actaaaaacatatttaacc 126  Q
    |||||||||||||||||||    
T  6751426 actaaaaacatatttaacc 6751444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 1500981 - 1501078
Alignment:
Q  36 aaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaatt 133  Q
    ||||||||  ||||||||| ||||||||||  ||| || ||| ||||||| ||||    |||||||||| ||||||||||||||||||||| ||||||    
T  1500981 aaaaatgtagggattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaaccctaaatt 1501078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 5683278 - 5683161
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| |||||||| |||||| | ||| |||||||| |||||||||  |||||||||  ||| || ||| |||| || |||  || ||||||| ||||||    
T  5683278 agcagggactaattttgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaagga 5683179  T
Q  109 ctaaaaacatatttaacc 126  Q
     |||||||||||||||||    
T  5683178 ttaaaaacatatttaacc 5683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 50359234 - 50359125
Alignment:
Q  17 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 116  Q
    |||||| |||||||||| | ||||||||  ||||| || ||||||||||  ||| || ||| |||||||  || ||  |||||||||||||||||||||     
T  50359234 ctaattttgataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggactattcttcgaattggcgcaaaatataaggactaaaaaa 50359135  T
Q  117 atatttaacc 126  Q
    ||||||||||    
T  50359134 atatttaacc 50359125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 36792338 - 36792240
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||| ||||||||  ||||||||| |||||||| |  |||||| ||||||||||| ||||| | ||||||| || | ||| |||||||||||||||    
T  36792338 taacggagtaaaaatgtagggattttaa-aacatttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatatttaacc 36792240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 36793565 - 36793664
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||  ||||||||  ||||||||| |||||||| || ||| ||  || ||||||| ||| | | |||||||||| |||||||||||||||||||||    
T  36793565 taacggaataaaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaacc 36793664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 45664801 - 45664687
Alignment:
Q  12 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataaggact 110  Q
    |||||||| || ||||||||||| ||||||||| ||||||||| |||||||| || ||| ||  || ||||| || ||||||  | ||||| || |||||    
T  45664801 agagactatttttgataacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactattc-ttcaaatgagcgtaaaatgtagggact 45664703  T
Q  111 aaaaacatatttaacc 126  Q
    ||||||||||||||||    
T  45664702 aaaaacatatttaacc 45664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 4288422 - 4288527
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| |||||||| | | |||||||| ||||||||| |||||||||| ||      ||| ||||||| |||  |  |||||||||||||||||||||||    
T  4288422 taattttgataacgaatataaaatgtgaggattttaaaaacatttaatgtag-----ggactattcttcaaaggggcgcaaaatataaggactaaaaaca 4288516  T
Q  118 tatttaaccat 128  Q
    |||||||||||    
T  4288517 tatttaaccat 4288527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 6751158 - 6751049
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||| |  |||||| | ||||||||||  |||||| ||||||||||| |||  |   |||||| ||| |||||||     
T  6751158 gactaattttgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaagaggcacaaaatgtaaagactaaac 6751059  T
Q  115 acatatttaa 124  Q
    ||||||||||    
T  6751058 acatatttaa 6751049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 47541803 - 47541851
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacattta 63  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||    
T  47541803 gactaattttgataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 126
Target Start/End: Original strand, 47542078 - 47542109
Alignment:
Q  95 gcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||||||||||||||||||||||||||    
T  47542078 gcaaaatataaggactaaaaacatatttaacc 47542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 47541607 - 47541527
Alignment:
Q  37 aaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    |||||||| ||||||||| ||||||||||  |||||| ||| ||||||| |||  ||   ||||| |||||||||||||||    
T  47541607 aaaatgtgaggattttaaaaacatttaatgaaatatagggactattcttcaaagggacataaaatgtaaggactaaaaaca 47541527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 2517525 - 2517408
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    ||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  || ||||||| |||||||||||    
T  2517525 agactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaa 2517426  T
Q  114 aacatatttaaccataaa 131  Q
    || |||||||||| ||||    
T  2517425 aatatatttaaccctaaa 2517408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 2191328 - 2191216
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  2191328 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaa 2191229  T
Q  115 acatatttaacca 127  Q
    |||||||||||||    
T  2191228 acatatttaacca 2191216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 39729584 - 39729696
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    |||||||||  ||||||||||| |||||||| ||||||||| || |||||||  ||||||  || ||||||| ||| ||| |||||||||||||||||||    
T  39729584 agactaatttcgataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaa 39729683  T
Q  114 aacatatttaacc 126  Q
    ||| || ||||||    
T  39729684 aacgtaattaacc 39729696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 3691368 - 3691479
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| ||||||||  |||||||| ||||||||||  ||| || ||| ||||||| |||  |  |||||||| |||||||||||    
T  3691368 gactaattttgataacggagataaaatgtgaagattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggactaaaa 3691467  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  3691468 acatatttaacc 3691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 18107410 - 18107515
Alignment:
Q  21 ttatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatat 120  Q
    |||||||||||||| |||||| |  ||||||||| |||||||| || ||| || ||||||||||||||| | | |||||||  | |||||||||||||||    
T  18107410 ttatgataacggaggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggactaaaaacatat 18107509  T
Q  121 ttaacc 126  Q
    ||||||    
T  18107510 ttaacc 18107515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 21217295 - 21217411
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| |||||||| || |||||| || |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| |||||||    
T  21217295 gcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggac 21217394  T
Q  110 taaaaacatatttaacc 126  Q
    |||||||||||||||||    
T  21217395 taaaaacatatttaacc 21217411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 21265107 - 21264991
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| |||||||| || |||||| || |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| |||||||    
T  21265107 gcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggac 21265008  T
Q  110 taaaaacatatttaacc 126  Q
    |||||||||||||||||    
T  21265007 taaaaacatatttaacc 21264991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 21182422 - 21182307
Alignment:
Q  11 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 110  Q
    |||||||||||| ||||||| |||| ||||||||   ||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||    
T  21182422 cagagactaattttgataacagagataaaatgtgaaaattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggact 21182323  T
Q  111 aaaaacatatttaacc 126  Q
    ||||||||||||||||    
T  21182322 aaaaacatatttaacc 21182307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 3691199 - 3691094
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| |||||||| ||||||||| || |||||||| ||||||||| ||||||||||  ||| || | | ||||||| |||| |  |||||||||||||||    
T  3691199 gcagggactaattttgataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaagggcgcaaaatataaggac 3691100  T
Q  110 taaaaa 115  Q
    ||||||    
T  3691099 taaaaa 3691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 24093535 - 24093644
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||  ||||||||| ||||||||||| |||||| | | ||||||| |||  | |||||||| |||||  |||||    
T  24093535 gactaattttgataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaatgggtgcaaaatgtaagggttaaaa 24093634  T
Q  115 acatatttaa 124  Q
    | ||||||||    
T  24093635 agatatttaa 24093644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 2035707 - 2035608
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||| |||||||  ||||||||| |||||||| || ||| || ||||||||||||||||    | |||||||| |||| ||||||||||||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaacc 2035608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 21217034 - 21216923
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||  ||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  21217034 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 21216935  T
Q  115 acatatttaacc 126  Q
    | ||||||||||    
T  21216934 agatatttaacc 21216923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 21265368 - 21265479
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||  ||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  21265368 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 21265467  T
Q  115 acatatttaacc 126  Q
    | ||||||||||    
T  21265468 agatatttaacc 21265479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 32860923 - 32860814
Alignment:
Q  17 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 116  Q
    |||||| |||| ||||||| |||||||  ||||||||| ||||||||||  ||||||  || |||| || |||  || ||||||||||| | ||||||||    
T  32860923 ctaattttgatcacggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaagggacgcaaaatataaaggctaaaaac 32860824  T
Q  117 atatttaacc 126  Q
    ||||||||||    
T  32860823 atatttaacc 32860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 24093267 - 24093156
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||| ||| |||||||| ||| || ||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||| | ||||||||||||    
T  24093267 gactgattttgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaa 24093168  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  24093167 acatatttaacc 24093156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 39096930 - 39097046
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| ||||| ||| | |||||||| ||||||||  ||||||||| |||||||| |  ||| || ||||||||||  |||||  |||||||| || |||    
T  39096930 agcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattctc-aaaatcgtgcaaaatgtaggga 39097028  T
Q  109 ctaaaaacatatttaacc 126  Q
    | ||||||||||||||||    
T  39097029 ccaaaaacatatttaacc 39097046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 10709574 - 10709475
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||| | ||||||||  ||||||||| |||||||| |  ||| || ||| ||||||| ||||| | ||||||| ||| ||| ||||||||||||||||    
T  10709574 taacggtggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaacc 10709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 32114450 - 32114561
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| ||||||| |||| ||| |||| | ||||||| || |||||||  ||| || ||| |||||||| ||  |  ||||||| ||||||||||||    
T  32114450 gactaattttgataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaa 32114549  T
Q  115 acatatttaacc 126  Q
    | ||||||||||    
T  32114550 atatatttaacc 32114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 39096622 - 39096524
Alignment:
Q  27 taacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||||||||||| |||||||||| |||||||| |  ||| || ||| ||||| | |||||    ||||||||| |||| ||||||||||||||||    
T  39096622 taacggagaaaaaatgtatggattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaacc 39096524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 2191466 - 2191392
Alignment:
Q  50 tttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaa 124  Q
    ||||| |||||||| || ||| || ||||||||||| ||| | | ||||||| ||||||| ||||||||||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaa 2191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 7083792 - 7083838
Alignment:
Q  79 tattctttaaaatgatgcaaaatataaggactaaaaacatatttaac 125  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||||    
T  7083792 tattttttaaagggatgcaaaatataaggattaaaaacatatttaac 7083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 7083622 - 7083525
Alignment:
Q  26 ataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatattta 123  Q
    |||| ||||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| |||  || | ||||| |||||| ||||||||||||||    
T  7083622 ataagggagataaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 7083746 - 7083690
Alignment:
Q  75 ggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 131  Q
    ||||||||||| ||| | ||||||||| || |||| |||||||||||||||| ||||    
T  7083746 ggattattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaa 7083690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 10706624 - 10706680
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 65  Q
    ||||| ||||| || |||||||||||| |||||||| ||||||||| || |||||||    
T  10706624 agcagggactagttttgataacggagataaaatgtgaggattttaaaaatatttaat 10706680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 34909 - 34794
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| |||||||||||| |||||||| | | ||||| ||||||||||  ||| ||||||  ||| || |||  || ||||||||||||||    
T  34909 agcagagactaattttgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaaatagacgcaaaatataagga 34810  T
Q  109 ctaaaaacatatttaa 124  Q
    ||||||||||||||||    
T  34809 ctaaaaacatatttaa 34794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 35172 - 35281
Alignment:
Q  16 actaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaa 115  Q
    ||||||| | ||||| |||| |||||||| ||||||||| |||||| |||| ||| ||  || ||||||| |||  || ||||||| |||||||||||||    
T  35172 actaattttcataaccgagataaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaa 35271  T
Q  116 catatttaac 125  Q
    ||||||||||    
T  35272 catatttaac 35281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 5974122 - 5974011
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| | |||||||| | |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  | |||||||||||||||||||||    
T  5974122 gactaattttaataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaa 5974023  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  5974022 acatatttaacc 5974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 8710341 - 8710430
Alignment:
Q  37 aaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  | |||||||||||||||||||||||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaacc 8710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 1869559 - 1869451
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| ||   |||||| |||||| || || | ||| |||||||||||||||    
T  1869559 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaattattttttaaagtggtgtagaatgtaaggactaaaaaca 1869460  T
Q  118 tatttaacc 126  Q
    |||||||||    
T  1869459 tatttaacc 1869451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 25932359 - 25932476
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattatt---ctttaaaatgatgcaaaatataag 106  Q
    ||||||||||||| |||||||||||| |||||||| | ||||||| |||||| ||   ||| ||  || ||||   ||| |||||| |||||||||||||    
T  25932359 gcagagactaattttgataacggagataaaatgtgagaattttaataacattgaacgaaatgtagtgactattaatcttcaaaatggtgcaaaatataag 25932458  T
Q  107 gactaaaaacatatttaa 124  Q
    ||||||||||||||||||    
T  25932459 gactaaaaacatatttaa 25932476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 211530 - 211441
Alignment:
Q  37 aaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||||| ||||||||| | ||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaacc 211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 21113146 - 21113090
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 65  Q
    |||||||||||||| |||||| ||||| |||||||| | ||||||| ||||||||||    
T  21113146 agcagagactaattttgataaaggagataaaatgtgagaattttaaaaacatttaat 21113090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 4510298 - 4510183
Alignment:
Q  17 ctaattatgataacggagaaaaaatgtgt-ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaa 115  Q
    |||||| ||||||| |||| ||||| ||  ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  | ||||| |||||||||||||    
T  4510298 ctaattttgataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaa 4510199  T
Q  116 catatttaaccataaa 131  Q
    ||||||||||| ||||    
T  4510198 catatttaaccctaaa 4510183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 14712979 - 14713095
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||||||||||| ||||||| |||| ||||| || | ||||  | ||||||||||  ||| || ||| ||||||| ||||    ||||||| |||| |    
T  14712979 agcagagactaattttgataacagagataaaatatgagcatttctaaaacatttaatgaaatgtaaggactattcttcaaaagagcgcaaaatgtaagaa 14713078  T
Q  109 ctaaaaacatatttaac 125  Q
     ||||||||||||||||    
T  14713079 ttaaaaacatatttaac 14713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 19595659 - 19595739
Alignment:
Q  46 ggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||| || ||||| |  ||| || ||| |||||||||||| | |||||||| || ||||||| |||||||||||||    
T  19595659 ggattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaacc 19595739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 44504368 - 44504481
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  | |||||||| |||||||||||||||    
T  44504368 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaaca 44504467  T
Q  118 tatttaaccataaa 131  Q
     |||||||| ||||    
T  44504468 catttaaccctaaa 44504481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 22814413 - 22814296
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| |||||||| |||||||| ||| |||||||| ||||||||| ||||||||||  ||| |||||| ||||||| |||  |  ||||||| |||| |    
T  22814413 agcagggactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaa 22814314  T
Q  109 ctaaaaacatatttaacc 126  Q
     |||||||||||||||||    
T  22814313 ttaaaaacatatttaacc 22814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 51471450 - 51471335
Alignment:
Q  11 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 110  Q
    |||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| ||   | ||||||| |||  || ||||||| |||| |||    
T  51471450 cagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaact 51471351  T
Q  111 aaaaacatatttaacc 126  Q
    || |||||||||||||    
T  51471350 aagaacatatttaacc 51471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 9218489 - 9218608
Alignment:
Q  11 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 110  Q
    |||||||||||| |||||||| ||| ||||||||  |||||||| ||||||||||  |||||| ||| ||||||| |||     ||||||| ||| ||||    
T  9218489 cagagactaatt-tgataacgaagataaaatgtgatgattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgact 9218587  T
Q  111 aaaaacatatttaaccataaa 131  Q
    |||||||||||||||| ||||    
T  9218588 aaaaacatatttaaccctaaa 9218608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 25770429 - 25770314
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| ||||||||  || |||||||| ||||| ||| ||||||||||  ||| || ||| ||||||| |||  ||| |||||| |||||||||||||||    
T  25770429 taattttgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaaca 25770330  T
Q  118 tatttaaccataaatt 133  Q
    |||| |||| ||||||    
T  25770329 tattgaaccctaaatt 25770314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 13637759 - 13637873
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    ||||| || |||||||||||| |||||||| ||||||||| || |||||||  ||| ||  || ||||||| |||  |  ||||||| ||||||||| ||    
T  13637759 gactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaa 13637858  T
Q  115 acatatttaaccata 129  Q
    |||||||||||||||    
T  13637859 acatatttaaccata 13637873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 37172192 - 37172084
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| ||| |||| ||||||||| ||||||||||  ||| ||  || |||||||||||     ||||||| ||||||||||||    
T  37172192 gactaattttgataacggagataaactgtgaggattttaaaaacatttaatgaaatgtagagactattctttaaataagcgcaaaatgtaaggactaaaa 37172093  T
Q  115 acatattta 123  Q
    | |||||||    
T  37172092 aaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 38485813 - 38485699
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||| ||||||||| |||||||||||| ||||||   ||||||||| ||||| ||||| ||| |||||| ||||||| |||  |   |||||| ||||||    
T  38485813 agcaaagactaattttgataacggaga-aaaatgcaaggattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatgtaagga 38485715  T
Q  109 ctaaaaacatatttaa 124  Q
    |||||| |||||||||    
T  38485714 ctaaaatcatatttaa 38485699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 43933551 - 43933440
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||| ||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| |||  |   |||||| ||||||||||||    
T  43933551 gactaattttgataacgaagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaa 43933452  T
Q  115 acatatttaacc 126  Q
    | ||||||||||    
T  43933451 atatatttaacc 43933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 4199569 - 4199446
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    ||||| ||||| ||| | |||||||  ||||||||  ||||||||| |||||||| |  |||||| ||| ||||||  |||||  |||||||| || |||    
T  4199569 agcagggactatttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatataaggactattctc-aaaatcgtgcaaaatgtaggga 4199471  T
Q  109 ctaaaaacatatttaaccataaatt 133  Q
    | |||||||||||||||| ||||||    
T  4199470 ccaaaaacatatttaaccctaaatt 4199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27013521 - 27013469
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 66  Q
    ||||||||| |||||||||||| |||||||  ||||||||| |||||||||||    
T  27013521 agactaattgtgataacggagataaaatgtaaggattttaaaaacatttaata 27013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 34743444 - 34743560
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    ||||||||||||| |||||||  | | |||||||| ||||||| | ||||||||||  ||| || |||| |||||| |||  || ||||| | |||||||    
T  34743444 gcagagactaattttgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagggacgcaaagtgtaaggac 34743543  T
Q  110 taaaaacatatttaacc 126  Q
    || | ||||||||||||    
T  34743544 tagatacatatttaacc 34743560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 132062 - 132149
Alignment:
Q  39 aatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaacc 126  Q
    |||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||    |||||||| ||||||||||| ||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaacc 132149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 44504203 - 44504100
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| ||||||||| || |||||||  ||| || ||| ||||||| |||  ||  |||||| |||| ||||||     
T  44504203 gactaattttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaatggacacaaaatgtaagaactaaag 44504104  T
Q  115 acat 118  Q
    ||||    
T  44504103 acat 44504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 50732342 - 50732224
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 107  Q
    ||||| |||||||| |||||||||||| |||||| | ||||||||| || |||||||  ||| |||||| |||| ||| ||| ||  ||||||| |||||    
T  50732342 agcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatt-tttcaaaggagcgcaaaatgtaagg 50732244  T
Q  108 actaaaaacatatttaacca 127  Q
    |  |||||||||||| ||||    
T  50732243 ataaaaaacatatttgacca 50732224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 50780513 - 50780631
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatga-tgcaaaatataagg 107  Q
    ||||| |||||||| |||||||||||| |||||| | ||||||||| || |||||||  ||| |||||| |||| ||| ||| ||  ||||||| |||||    
T  50780513 agcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatt-tttcaaaggagcgcaaaatgtaagg 50780611  T
Q  108 actaaaaacatatttaacca 127  Q
    |  |||||||||||| ||||    
T  50780612 ataaaaaacatatttgacca 50780631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 22814641 - 22814679
Alignment:
Q  96 caaaatataaggactaaaaacatatttaaccataaattc 134  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  22814641 caaaatataagtactaaaaacatatttaaccctaaattc 22814679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 20831075 - 20831191
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| ||||| || || ||||||| |||||||||  ||||||||| |||||||| |  ||| || ||| ||||  |||||||||   ||||| || ||||    
T  20831075 gcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggac 20831174  T
Q  110 taaaaacatatttaacc 126  Q
     ||||||||||||||||    
T  20831175 caaaaacatatttaacc 20831191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 50002057 - 50002085
Alignment:
Q  100 atataaggactaaaaacatatttaaccat 128  Q
    |||||||||||||||||||||||||||||    
T  50002057 atataaggactaaaaacatatttaaccat 50002085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 51755903 - 51755943
Alignment:
Q  25 gataacggagaaaaaatgtgtggattttaagaacatttaat 65  Q
    ||||||||||| |||||||| ||||||||| ||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaat 51755943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 28854785 - 28854677
Alignment:
Q  18 taattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaaca 117  Q
    ||||| ||||||| || | |||||||| ||||||||| ||||||||||| ||| || ||| |||||||||||  |  |||||||||||||| ||||||||    
T  28854785 taattttgataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctttaaatgggcgcaaaatataaggattaaaaaca 28854686  T
Q  118 tatttaacc 126  Q
    |||||||||    
T  28854685 tatttaacc 28854677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 30938687 - 30938592
Alignment:
Q  34 gaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccata 129  Q
    ||||||||||  | ||||||| ||||||||||| ||| ||||||||||||||||||  |  ||||||| |||||||||||||||||||||| ||||    
T  30938687 gaaaaaatgtaggaattttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaatcata 30938592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 18152865 - 18152756
Alignment:
Q  17 ctaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaac 116  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||| | ||| || ||| ||||||| |||  |  ||||||| |||| ||| |||||    
T  18152865 ctaattttgataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaaggggcgcaaaatgtaagaactgaaaac 18152766  T
Q  117 atatttaacc 126  Q
    ||||||||||    
T  18152765 atatttaacc 18152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 20544290 - 20544398
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||| ||| |||||||| ||| |||||||| | ||||||| ||||||||||  ||| || ||| ||||||| |||| | |||||||||||||||||||||    
T  20544290 gactgattttgataacgaagataaaatgtgag-attttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaa 20544388  T
Q  115 acatatttaa 124  Q
    ||||||||||    
T  20544389 acatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 10466759 - 10466875
Alignment:
Q  16 actaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaa 115  Q
    ||||||| |||||| ||||| ||||||||  |||||||| ||||||||||| ||||||  || ||||||| |||  || ||||||| ||| || ||||||    
T  10466759 actaattttgataatggagataaaatgtgacgattttaaaaacatttaataaaatatagagactattcttcaaatagacgcaaaatgtaaagattaaaaa 10466858  T
Q  116 catatttaaccataaat 132  Q
    ||||||||||| |||||    
T  10466859 catatttaaccctaaat 10466875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 17075330 - 17075219
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| || |||||| || |||||||| ||||||||| ||| ||||||  ||| || ||| ||||||| |||  |  ||||||||||||||||||||    
T  17075330 gactaattttgttaacggggataaaatgtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaa 17075231  T
Q  115 acatatttaacc 126  Q
    ||||||||||||    
T  17075230 acatatttaacc 17075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 28852808 - 28852693
Alignment:
Q  11 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggact 110  Q
    ||||| |||||| ||||||||| || |||||||| ||||||||| ||||||||||  ||| || ||| |||| ||||||  ||  |||||| |||||| |    
T  28852808 cagaggctaattttgataacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatgtaaggatt 28852709  T
Q  111 aaaaacatatttaacc 126  Q
    ||||||||||||||||    
T  28852708 aaaaacatatttaacc 28852693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 22948854 - 22948960
Alignment:
Q  12 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggacta 111  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||  ||| ||  || ||||||| |||  |  ||||||| |||||||||    
T  22948854 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaagggtcgcaaaatgtaaggacta 22948953  T
Q  112 aaaacat 118  Q
    |||||||    
T  22948954 aaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 44803611 - 44803721
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||||||||| |||||||| | ||||||| ||||||||||  ||| ||  || |||||||||||     ||||||| ||||||||||||    
T  44803611 gactaattttgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaa 44803710  T
Q  115 acatatttaac 125  Q
    |||||||||||    
T  44803711 acatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 28838604 - 28838520
Alignment:
Q  47 gattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatttaaccataaa 131  Q
    |||||||| |||||||| || ||| || |||||||| || ||||||||||||||| || |||| |||||||||||||||| ||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaaccttaaa 28838520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 17075596 - 17075707
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaa 114  Q
    |||||||| |||||  ||||| |||||||| ||||||||| ||||||||||  ||| || ||| ||||||| |||  |  ||||||| ||||||||||||    
T  17075596 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 17075695  T
Q  115 acatatttaacc 126  Q
    | ||||||||||    
T  17075696 agatatttaacc 17075707  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 16755619 - 16755727
Alignment:
Q  22 tatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaaaacatatt 121  Q
    |||| ||||||||||||||| || ||||||||| || |||||||  ||||||  || ||||||| ||| ||  ||||||||| |||| ||||||||||||    
T  16755619 tatggtaacggagaaaaaatatgaggattttaaaaatatttaatgaaatatagagactattcttcaaagtggcgcaaaatat-aggattaaaaacatatt 16755717  T
Q  122 taaccataaa 131  Q
    ||||| ||||    
T  16755718 taaccctaaa 16755727  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 32092505 - 32092558
Alignment:
Q  12 agagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 65  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  32092505 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaat 32092558  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 32092340 - 32092228
Alignment:
Q  14 agactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggactaaa 113  Q
    ||||||||| |||||||  | | |||||||| ||||||||| ||||||||||  |||  | ||| ||||||| |||  |  ||||||| |||||||||||    
T  32092340 agactaattttgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaa 32092241  T
Q  114 aacatatttaacc 126  Q
    |||||||||||||    
T  32092240 aacatatttaacc 32092228  T

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Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 11975038 - 11975093
Alignment:
Q  11 cagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaata 66  Q
    |||||||||||| |||||||||| | |||||||| ||||||||| |||||||||||    
T  11975038 cagagactaattttgataacggaaataaaatgtgaggattttaaaaacatttaata 11975093  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 28838463 - 28838413
Alignment:
Q  15 gactaattatgataacggagaaaaaatgtgtggattttaagaacatttaat 65  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  28838463 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaat 28838413  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 20544028 - 20543911
Alignment:
Q  9 agcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataagga 108  Q
    |||||| ||||||| |||||||||||| ||||| || ||||||||| || |||||||  ||| || ||| ||||||| |||  |   |||||| |||| |    
T  20544028 agcagaaactaattttgataacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaaaatgtaagaa 20543929  T
Q  109 ctaaaaacatatttaacc 126  Q
     |||||||||||||||||    
T  20543928 ttaaaaacatatttaacc 20543911  T

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Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 4152836 - 4152720
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||||||| |||| || ||||||   ||||||||  ||||||||| |||||| |||| ||| || |||||||||||||||||   | ||| | || | ||    
T  4152836 gcagagaccaattttgttaacggtagaaaaatgtagggattttaaaaacattcaataaaatgtagggattattctttaaaattgcgtaaactgtaggaac 4152737  T
Q  110 taaaaacatatttaacc 126  Q
    |||||||||||||||||    
T  4152736 taaaaacatatttaacc 4152720  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 126
Target Start/End: Complemental strand, 23548085 - 23548054
Alignment:
Q  95 gcaaaatataaggactaaaaacatatttaacc 126  Q
    ||||||||||||||||||||||||||||||||    
T  23548085 gcaaaatataaggactaaaaacatatttaacc 23548054  T

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Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 32968 - 33084
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| ||||| || || ||||||| |||||||||  ||||||||| |||||||| |  ||| || ||| ||||  ||||||||| ||||||| || ||||    
T  32968 gcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggac 33067  T
Q  110 taaaaacatatttaacc 126  Q
     ||||||||||||||||    
T  33068 caaaaacatatttaacc 33084  T

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Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 29390 - 29274
Alignment:
Q  10 gcagagactaattatgataacggagaaaaaatgtgtggattttaagaacatttaatataatatatggattattctttaaaatgatgcaaaatataaggac 109  Q
    |||| ||||| || || |||||||  ||||||||  ||||||||| |||||||| |  ||| || ||| ||||  ||||||||| ||||||| || ||||    
T  29390 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggac 29291  T
Q  110 taaaaacatatttaacc 126  Q
     || |||||||||||||    
T  29290 caataacatatttaacc 29274  T

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