View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4926-Insertion-2 (Length: 825)

Name: NF4926-Insertion-2
Description: NF4926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4926-Insertion-2
NF4926-Insertion-2
[»] chr4 (8 HSPs)
chr4 (166-351)||(43210444-43210629)
chr4 (8-118)||(47810349-47810459)
chr4 (620-825)||(43210331-43210538)
chr4 (673-716)||(26933232-26933275)
chr4 (8-41)||(3928671-3928704)
chr4 (432-497)||(47153227-47153296)
chr4 (736-812)||(72536-72616)
chr4 (677-720)||(41881954-41881997)
[»] chr8 (9 HSPs)
chr8 (566-708)||(4174822-4174964)
chr8 (208-352)||(4174180-4174321)
chr8 (417-537)||(4174386-4174509)
chr8 (626-825)||(4174036-4174226)
chr8 (172-254)||(4174882-4174964)
chr8 (736-810)||(35555463-35555541)
chr8 (662-718)||(16422252-16422308)
chr8 (662-718)||(16423704-16423760)
chr8 (173-218)||(16423704-16423749)
[»] chr1 (6 HSPs)
chr1 (679-825)||(13535602-13535744)
chr1 (677-718)||(50268514-50268555)
chr1 (673-717)||(38632520-38632564)
chr1 (673-720)||(38633146-38633193)
chr1 (767-825)||(50269170-50269228)
chr1 (671-708)||(5845453-5845490)
[»] chr7 (3 HSPs)
chr7 (663-720)||(38857906-38857963)
chr7 (673-716)||(40811179-40811222)
chr7 (663-725)||(38857157-38857219)
[»] chr5 (2 HSPs)
chr5 (662-718)||(204539-204595)
chr5 (665-719)||(17047010-17047064)
[»] chr3 (1 HSPs)
chr3 (663-720)||(18745950-18746007)
[»] chr2 (2 HSPs)
chr2 (663-720)||(41565377-41565434)
chr2 (676-716)||(41566135-41566175)


Alignment Details
Target: chr4 (Bit Score: 114; Significance: 2e-57; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 166 - 351
Target Start/End: Original strand, 43210444 - 43210629
Alignment:
Q  166 aactgtcgaaattcaatttaattcatcgacagttaagtgtcatggaaatcattaatccaatttaatgcattcttgcgtgacatagtctcaagaaaatgaa 265  Q
    ||||| |||||| ||||||||||||||| || ||||||| | || ||||||||||||||||||||||||||||| ||||||||||||||  || | ||||    
T  43210444 aactgccgaaatccaatttaattcatcggcacttaagtgccgtgaaaatcattaatccaatttaatgcattcttccgtgacatagtctccggacagtgaa 43210543  T
Q  266 gaatatcaactactcccaagtgacattaatgccaaaacgatgaatttgcatgacaaccgaaattttaattaagacaaattttaact 351  Q
     ||||||||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  43210544 aaatatcaactactcccaaccgacattaatgccaagacgatgaatttgtatgacaaccgaaattttaattaagataaattttaact 43210629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 47810459 - 47810349
Alignment:
Q  8 cttttatggaagatgaattggaatctgagaagtgattatggtgattttggatgatttgagaagcttgtttaagtgctttcagaacttgaataagttgagt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  47810459 cttttatggaagatgaattggaatctgagaagtgattatggtgattttggatgttttgagaagcttgtttaagtgcttccagaacttgaataagttgagt 47810360  T
Q  108 gattgggattt 118  Q
    |||||||||||    
T  47810359 gattgggattt 47810349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 620 - 825
Target Start/End: Complemental strand, 43210538 - 43210331
Alignment:
Q  620 tgtccggagattatgtcactcaagaatgcattaaattggattaatgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactg 719  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43210538 tgtccggagactatgtcacggaagaatgcattaaattggattaatgattttcacggcacttaagtgccgatgaattaaattggatttcggcagttaactg 43210439  T
Q  720 ctgaag--nnnnnnngacagttaactgcagccggtttcattttcggtagttaactaccgaagagtattttgcaattttactcgtgtttttcagccaaacc 817  Q
      ||||         |  |||||||| ||||||||||||||||||||||||||||   || |  |||||||  ||||||||||||||| || |||||||     
T  43210438 tcgaagtttttttttggaagttaactacagccggtttcattttcggtagttaactgttgatggatattttggtattttactcgtgtttctcggccaaact 43210339  T
Q  818 acatgtgt 825  Q
    ||||||||    
T  43210338 acatgtgt 43210331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 673 - 716
Target Start/End: Original strand, 26933232 - 26933275
Alignment:
Q  673 cggcacttaagtgccgatgaattaaattggatttcgacagttaa 716  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  26933232 cggcacttaagtgccgatggattaaattggatttcggcagttaa 26933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 3928671 - 3928704
Alignment:
Q  8 cttttatggaagatgaattggaatctgagaagtg 41  Q
    ||||||||||||||||||||||||||||||||||    
T  3928671 cttttatggaagatgaattggaatctgagaagtg 3928704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 497
Target Start/End: Complemental strand, 47153296 - 47153227
Alignment:
Q  432 tatcatgataagaatgaattattaacgaatgaatgaat----gtagttaattcattcttaattttaattt 497  Q
    |||||||||||||||||||| |||| ||||||||||||    ||||||||| |||||||||  |||||||    
T  47153296 tatcatgataagaatgaattgttaatgaatgaatgaatgaacgtagttaatgcattcttaaagttaattt 47153227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 812
Target Start/End: Original strand, 72536 - 72616
Alignment:
Q  736 agttaactgcagccggtttcatttt----cggtagttaactaccgaagagtattttgcaattttactcgtgtttttcagcc 812  Q
    |||||||||||| ||||||||| ||    ||| ||||||||||||||  ||||||||  ||||||||||||||| ||||||    
T  72536 agttaactgcagacggtttcatatttcctcggcagttaactaccgaatggtattttggtattttactcgtgtttctcagcc 72616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 720
Target Start/End: Complemental strand, 41881997 - 41881954
Alignment:
Q  677 acttaagtgccgatgaattaaattggatttcgacagttaactgc 720  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  41881997 acttaagcgccgatgaaataaattgaatttcgacagttaactgc 41881954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 1e-55; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 566 - 708
Target Start/End: Original strand, 4174822 - 4174964
Alignment:
Q  566 atttgtacgttgggattatgtagttgaccattgtgtcttaattaaaatttcggttgtccggagattatgtcactcaagaatgcattaaattggattaatg 665  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||    
T  4174822 atttgtacgttgggattatgtagttgaccattgtgccttaattaaaatttcggttgtttggagattatgtcacgcaagaatgcattaaactggattaatg 4174921  T
Q  666 attttcacggcacttaagtgccgatgaattaaattggatttcg 708  Q
    |||||||| |||||||||||  |||||||||||||||||||||    
T  4174922 attttcacagcacttaagtgttgatgaattaaattggatttcg 4174964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 208 - 352
Target Start/End: Original strand, 4174180 - 4174321
Alignment:
Q  208 tggaaatcattaatccaatttaatgcattcttgcgtgacatagtctcaagaaaatgaagaatatcaactactcccaagtgacattaatgccaaaacgatg 307  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  4174180 tggaaatcattaatccaatttaatgcattcttgcgtgacataatctcaagacaatgaagaatatcaactactcccaaccgacattaatgtcaagacgatg 4174279  T
Q  308 aatttgcatgacaaccgaaattttaattaagacaaattttaactg 352  Q
    |||||| |||   ||||||||||||||||||||||||||||||||    
T  4174280 aatttgtatg---accgaaattttaattaagacaaattttaactg 4174321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 417 - 537
Target Start/End: Original strand, 4174386 - 4174509
Alignment:
Q  417 ggcgttgatttcctctatcatgataagaatgaattattaacgaatgaatgaatgtagttaattcattcttaattttaattttccgttaatttcttatatt 516  Q
    |||||||||||||| |||||||||||||||||||||||||    |||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||    
T  4174386 ggcgttgatttcctatatcatgataagaatgaattattaa----tgaatgaatgtagttaatgcattcttaattctaatttttcgttaatttcctatatt 4174481  T
Q  517 c-------tcggtgctttgcattcattc 537  Q
    |       ||||||||||||||||||||    
T  4174482 caatttggtcggtgctttgcattcattc 4174509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 825
Target Start/End: Complemental strand, 4174226 - 4174036
Alignment:
Q  626 gagattatgtcactcaagaatgcattaaattggattaatgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactgctgaag 725  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||          || |||||||||||||| | ||||||||||  ||||    
T  4174226 gagattatgtcacgcaagaatgcattaaattggattaatgatttccacggcact----------tggattaaattggattttggcagttaactgtcgaag 4174137  T
Q  726 -nnnnnnngacagttaactgcagccggtttcattttcggtagttaactaccgaagagtattttgcaattttactcgtgtttttcagccaaaccacatgtg 824  Q
            |  | ||||||||||||||||  ||||||| | |||||||||||||   ||||||   ||||||| ||||||| ||||||||||||||||||    
T  4174136 tttttttcggtaattaactgcagccggttcgattttcgatcgttaactaccgaaagatattttagtattttacccgtgtttctcagccaaaccacatgtg 4174037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 4174964 - 4174882
Alignment:
Q  172 cgaaattcaatttaattcatcgacagttaagtgtcatggaaatcattaatccaatttaatgcattcttgcgtgacatagtctc 254  Q
    |||||| |||||||||||||| ||| |||||||   || |||||||||||||| |||||||||||||||||||||||| ||||    
T  4174964 cgaaatccaatttaattcatcaacacttaagtgctgtgaaaatcattaatccagtttaatgcattcttgcgtgacataatctc 4174882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 736 - 810
Target Start/End: Original strand, 35555463 - 35555541
Alignment:
Q  736 agttaactgcagccggtttcatttt----cggtagttaactaccgaagagtattttgcaattttactcgtgtttttcag 810  Q
    |||||||||||||||||||||| ||    ||| ||||||||||||| | ||||||||  ||||||||||||||| ||||    
T  35555463 agttaactgcagccggtttcatgtttcctcggcagttaactaccgaggggtattttggtattttactcgtgtttctcag 35555541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 662 - 718
Target Start/End: Complemental strand, 16422308 - 16422252
Alignment:
Q  662 aatgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaact 718  Q
    |||||||| ||| |||||| |||||||||||||||||||| |||| || ||||||||    
T  16422308 aatgatttccactgcacttcagtgccgatgaattaaattgaattttgatagttaact 16422252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 662 - 718
Target Start/End: Original strand, 16423704 - 16423760
Alignment:
Q  662 aatgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaact 718  Q
    |||||||| ||||||| ||||||| ||||||||||||||| |||||  |||||||||    
T  16423704 aatgatttccacggcatttaagtgtcgatgaattaaattgaatttccgcagttaact 16423760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 16423749 - 16423704
Alignment:
Q  173 gaaattcaatttaattcatcgacagttaagtgtcatggaaatcatt 218  Q
    |||||||||||||||||||||||| |||| || | |||||||||||    
T  16423749 gaaattcaatttaattcatcgacacttaaatgccgtggaaatcatt 16423704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 679 - 825
Target Start/End: Original strand, 13535602 - 13535744
Alignment:
Q  679 ttaagtgccgatgaattaaattggatttcgacagttaactgctgaagnnnnnnngacagttaactgcagccggtttcattttcggtagttaactaccgaa 778  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||        | |||||||||||||||||| |||||||||| ||||||| |||||    
T  13535602 ttaagtgccgatgaattaaattggatttcgacagttaactgccgaagtttt----atagttaactgcagccggttccattttcggtggttaactgccgaa 13535697  T
Q  779 gagtattttgcaattttactcgtgtttttcagccaaaccacatgtgt 825  Q
    |  ||||||   ||||||||||| ||| ||||| | |||||||||||    
T  13535698 ggatattttagtattttactcgtatttctcagcgataccacatgtgt 13535744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 677 - 718
Target Start/End: Complemental strand, 50268555 - 50268514
Alignment:
Q  677 acttaagtgccgatgaattaaattggatttcgacagttaact 718  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  50268555 acttaagtgccgatggattaaattggatttcggcagttaact 50268514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 673 - 717
Target Start/End: Complemental strand, 38632564 - 38632520
Alignment:
Q  673 cggcacttaagtgccgatgaattaaattggatttcgacagttaac 717  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||    
T  38632564 cggcacttaagtgccgatggattaaattggatttcggaagttaac 38632520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 720
Target Start/End: Original strand, 38633146 - 38633193
Alignment:
Q  673 cggcacttaagtgccgatgaattaaattggatttcgacagttaactgc 720  Q
    ||||||||||||| ||||| ||||||||| |||||| |||||||||||    
T  38633146 cggcacttaagtggcgatggattaaattgaatttcggcagttaactgc 38633193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 767 - 825
Target Start/End: Original strand, 50269170 - 50269228
Alignment:
Q  767 ttaactaccgaagagtattttgcaattttactcgtgtttttcagccaaaccacatgtgt 825  Q
    ||||||||||| | |||||||    |||||||||||||| |||||||||||||||||||    
T  50269170 ttaactaccgaggggtattttcatcttttactcgtgtttctcagccaaaccacatgtgt 50269228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 708
Target Start/End: Original strand, 5845453 - 5845490
Alignment:
Q  671 cacggcacttaagtgccgatgaattaaattggatttcg 708  Q
    ||||||||||||||||||||| || |||||||||||||    
T  5845453 cacggcacttaagtgccgatggatgaaattggatttcg 5845490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 663 - 720
Target Start/End: Original strand, 38857906 - 38857963
Alignment:
Q  663 atgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactgc 720  Q
    ||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  38857906 atgatttcctcggcacttaagtgccgatggattaaattggacttcgacagttaactgc 38857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 716
Target Start/End: Original strand, 40811179 - 40811222
Alignment:
Q  673 cggcacttaagtgccgatgaattaaattggatttcgacagttaa 716  Q
    ||||||||||||||||||| |||||||||||||| | |||||||    
T  40811179 cggcacttaagtgccgatggattaaattggattttggcagttaa 40811222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 725
Target Start/End: Complemental strand, 38857219 - 38857157
Alignment:
Q  663 atgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactgctgaag 725  Q
    ||||||| | |||||||||||||||||   ||||||||||| |||| ||||||||||| ||||    
T  38857219 atgatttcctcggcacttaagtgccgaaagattaaattggacttcggcagttaactgccgaag 38857157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 662 - 718
Target Start/End: Complemental strand, 204595 - 204539
Alignment:
Q  662 aatgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaact 718  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||    
T  204595 aatgatttccacggcacttaagtgccgatgaattagattgaatttcgccagttaact 204539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 665 - 719
Target Start/End: Complemental strand, 17047064 - 17047010
Alignment:
Q  665 gattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactg 719  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  17047064 gatttccacggcacttaagtgtcgatggattaaattggatttcggcagttaactg 17047010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 663 - 720
Target Start/End: Complemental strand, 18746007 - 18745950
Alignment:
Q  663 atgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactgc 720  Q
    ||||||| |||||||||||||||| |||| || |||||| |||||| |||||||||||    
T  18746007 atgatttccacggcacttaagtgctgatggatgaaattgaatttcggcagttaactgc 18745950  T

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Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 663 - 720
Target Start/End: Complemental strand, 41565434 - 41565377
Alignment:
Q  663 atgattttcacggcacttaagtgccgatgaattaaattggatttcgacagttaactgc 720  Q
    ||||||| | ||||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  41565434 atgatttcctcggcacttaagtgtcgatggattaaattggacttcggcagttaactgc 41565377  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 716
Target Start/End: Original strand, 41566135 - 41566175
Alignment:
Q  676 cacttaagtgccgatgaattaaattggatttcgacagttaa 716  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  41566135 cacttaagtgccgatggattaaattggacttcgacagttaa 41566175  T

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