View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4926_high_8 (Length: 265)

Name: NF4926_high_8
Description: NF4926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4926_high_8
NF4926_high_8
[»] chr3 (41 HSPs)
chr3 (74-255)||(44104998-44105178)
chr3 (1-60)||(27183658-27183717)
chr3 (1-60)||(9625042-9625101)
chr3 (1-60)||(36476418-36476477)
chr3 (1-60)||(52030180-52030239)
chr3 (1-59)||(10959192-10959250)
chr3 (1-59)||(24559448-24559506)
chr3 (1-60)||(24136727-24136788)
chr3 (8-58)||(32453502-32453552)
chr3 (4-56)||(42823966-42824018)
chr3 (1-56)||(14868744-14868799)
chr3 (9-59)||(7448341-7448391)
chr3 (9-59)||(7456483-7456533)
chr3 (7-59)||(38555006-38555058)
chr3 (1-59)||(36331704-36331762)
chr3 (1-59)||(3784129-3784187)
chr3 (1-60)||(33206816-33206875)
chr3 (1-60)||(46328901-46328960)
chr3 (4-59)||(50724429-50724484)
chr3 (4-59)||(50788364-50788419)
chr3 (1-59)||(34344756-34344814)
chr3 (1-58)||(3955367-3955424)
chr3 (1-60)||(8930952-8931013)
chr3 (2-60)||(36763491-36763552)
chr3 (2-60)||(44671529-44671587)
chr3 (10-54)||(45118711-45118756)
chr3 (1-60)||(14417927-14417986)
chr3 (2-46)||(28226178-28226222)
chr3 (2-58)||(35140779-35140835)
chr3 (11-59)||(44976642-44976690)
chr3 (1-60)||(47191432-47191491)
chr3 (6-60)||(43566773-43566827)
chr3 (2-56)||(35483329-35483383)
chr3 (2-49)||(41460336-41460385)
chr3 (7-41)||(43598863-43598897)
chr3 (1-60)||(47864695-47864756)
chr3 (1-59)||(27394566-27394626)
chr3 (7-40)||(31419648-31419681)
chr3 (1-54)||(40160794-40160849)
chr3 (1-54)||(45431686-45431741)
chr3 (1-48)||(49146143-49146190)
[»] chr8 (33 HSPs)
chr8 (1-60)||(2800078-2800137)
chr8 (3-60)||(35253801-35253858)
chr8 (1-59)||(31129361-31129419)
chr8 (4-60)||(1588829-1588885)
chr8 (4-59)||(10292414-10292469)
chr8 (1-60)||(38790549-38790608)
chr8 (1-59)||(2696592-2696650)
chr8 (3-59)||(35301141-35301197)
chr8 (1-60)||(7314792-7314851)
chr8 (2-60)||(10310342-10310400)
chr8 (13-60)||(18009692-18009739)
chr8 (1-50)||(43508435-43508484)
chr8 (1-59)||(22426460-22426518)
chr8 (3-60)||(39165041-39165099)
chr8 (1-59)||(171286-171344)
chr8 (1-59)||(5323981-5324039)
chr8 (10-60)||(8402284-8402335)
chr8 (1-59)||(23239183-23239241)
chr8 (1-59)||(14010750-14010808)
chr8 (6-60)||(14352791-14352845)
chr8 (1-60)||(17855708-17855769)
chr8 (2-59)||(36359696-36359753)
chr8 (5-59)||(39258643-39258697)
chr8 (1-59)||(1360111-1360170)
chr8 (7-59)||(7649593-7649645)
chr8 (4-48)||(10557457-10557502)
chr8 (4-60)||(24074568-24074624)
chr8 (2-59)||(42762010-42762065)
chr8 (3-59)||(43468683-43468739)
chr8 (1-60)||(4798518-4798577)
chr8 (1-60)||(25689365-25689424)
chr8 (9-41)||(36815460-36815492)
chr8 (2-59)||(39172189-39172248)
[»] chr4 (43 HSPs)
chr4 (1-60)||(8690273-8690332)
chr4 (1-60)||(9693021-9693080)
chr4 (1-60)||(28520708-28520767)
chr4 (1-59)||(14149852-14149910)
chr4 (1-59)||(48968188-48968246)
chr4 (1-60)||(53815755-53815814)
chr4 (6-60)||(15640420-15640474)
chr4 (1-59)||(36954196-36954254)
chr4 (1-59)||(52031266-52031324)
chr4 (1-55)||(46799466-46799520)
chr4 (1-59)||(53354944-53355002)
chr4 (1-60)||(42411430-42411490)
chr4 (1-60)||(40150532-40150591)
chr4 (3-60)||(52330886-52330943)
chr4 (6-60)||(5909760-5909814)
chr4 (1-54)||(36257753-36257806)
chr4 (6-59)||(56546427-56546480)
chr4 (1-53)||(7768772-7768824)
chr4 (16-60)||(27296896-27296940)
chr4 (15-59)||(46799569-46799613)
chr4 (7-59)||(48501636-48501688)
chr4 (6-56)||(26708534-26708583)
chr4 (2-59)||(31578077-31578134)
chr4 (1-53)||(30616059-30616111)
chr4 (3-59)||(31156198-31156254)
chr4 (1-60)||(30295572-30295631)
chr4 (1-60)||(30324474-30324533)
chr4 (1-54)||(37889587-37889642)
chr4 (1-59)||(20753103-20753161)
chr4 (1-59)||(30152173-30152231)
chr4 (4-54)||(46206650-46206701)
chr4 (1-60)||(11491194-11491255)
chr4 (1-60)||(37574331-37574392)
chr4 (3-60)||(41003149-41003206)
chr4 (1-60)||(50815766-50815827)
chr4 (1-59)||(36993100-36993160)
chr4 (3-59)||(43143781-43143837)
chr4 (2-58)||(44074913-44074969)
chr4 (4-56)||(56314823-56314875)
chr4 (1-56)||(3465642-3465697)
chr4 (1-60)||(10098184-10098243)
chr4 (1-56)||(11872932-11872988)
chr4 (1-60)||(29269292-29269351)
[»] chr1 (45 HSPs)
chr1 (1-60)||(40678882-40678941)
chr1 (2-59)||(13870059-13870116)
chr1 (1-53)||(17350120-17350172)
chr1 (3-55)||(17954841-17954893)
chr1 (4-60)||(47763362-47763418)
chr1 (1-56)||(19976533-19976588)
chr1 (1-60)||(25819244-25819303)
chr1 (1-60)||(39238775-39238834)
chr1 (7-60)||(35111714-35111767)
chr1 (1-58)||(52833085-52833142)
chr1 (1-53)||(29491529-29491580)
chr1 (1-59)||(38021311-38021369)
chr1 (19-60)||(2044941-2044982)
chr1 (3-59)||(29106846-29106902)
chr1 (1-59)||(32635199-32635258)
chr1 (1-60)||(12553253-12553314)
chr1 (1-60)||(15368864-15368923)
chr1 (1-59)||(32660889-32660948)
chr1 (1-59)||(38019925-38019983)
chr1 (12-54)||(12675726-12675768)
chr1 (1-60)||(49620031-49620092)
chr1 (1-59)||(23368708-23368768)
chr1 (1-60)||(15774289-15774348)
chr1 (14-46)||(19516479-19516511)
chr1 (1-60)||(50859344-50859403)
chr1 (1-59)||(3532952-3533010)
chr1 (4-58)||(4354084-4354138)
chr1 (1-59)||(11405515-11405573)
chr1 (1-59)||(19793585-19793643)
chr1 (1-59)||(35593822-35593880)
chr1 (1-59)||(37733814-37733872)
chr1 (1-40)||(42946464-42946503)
chr1 (1-60)||(19424105-19424166)
chr1 (1-60)||(29332343-29332404)
chr1 (3-54)||(29936662-29936715)
chr1 (1-59)||(32585407-32585465)
chr1 (1-59)||(2350351-2350411)
chr1 (6-58)||(4616937-4616989)
chr1 (1-60)||(3341711-3341772)
chr1 (3-60)||(7438682-7438741)
chr1 (1-60)||(9768784-9768845)
chr1 (3-58)||(9976361-9976418)
chr1 (4-59)||(39433420-39433475)
chr1 (3-58)||(41677121-41677178)
chr1 (1-60)||(46116151-46116210)
[»] chr5 (27 HSPs)
chr5 (2-60)||(20735152-20735210)
chr5 (1-59)||(1463930-1463988)
chr5 (1-59)||(18303056-18303114)
chr5 (2-58)||(38230184-38230240)
chr5 (1-60)||(4674792-4674851)
chr5 (1-59)||(36045112-36045170)
chr5 (6-59)||(37417108-37417161)
chr5 (2-54)||(25346244-25346296)
chr5 (1-58)||(10943775-10943832)
chr5 (5-59)||(37303997-37304050)
chr5 (3-60)||(30733181-30733238)
chr5 (4-60)||(6447457-6447513)
chr5 (1-59)||(843346-843404)
chr5 (1-59)||(29096286-29096344)
chr5 (1-59)||(17077420-17077480)
chr5 (1-60)||(42355732-42355793)
chr5 (1-59)||(3535912-3535972)
chr5 (1-60)||(18872580-18872637)
chr5 (1-59)||(28537194-28537254)
chr5 (1-59)||(32158392-32158450)
chr5 (10-52)||(1185849-1185891)
chr5 (1-59)||(29841407-29841465)
chr5 (1-58)||(38618660-38618717)
chr5 (1-60)||(1244704-1244763)
chr5 (9-60)||(9577360-9577411)
chr5 (12-44)||(36091309-36091341)
chr5 (1-56)||(42455375-42455430)
[»] chr6 (20 HSPs)
chr6 (1-58)||(29284177-29284234)
chr6 (5-59)||(14981680-14981734)
chr6 (1-53)||(33628925-33628977)
chr6 (1-60)||(9064925-9064984)
chr6 (1-60)||(11636745-11636804)
chr6 (1-58)||(24470370-24470427)
chr6 (1-59)||(6658521-6658579)
chr6 (1-60)||(6144023-6144082)
chr6 (1-60)||(25020505-25020564)
chr6 (1-60)||(12089156-12089215)
chr6 (5-60)||(18904660-18904715)
chr6 (3-47)||(21507192-21507235)
chr6 (6-60)||(5134411-5134465)
chr6 (1-60)||(6228235-6228296)
chr6 (2-59)||(10424513-10424570)
chr6 (1-60)||(18903342-18903403)
chr6 (1-60)||(3448411-3448470)
chr6 (2-59)||(15869040-15869099)
chr6 (7-59)||(18991420-18991471)
chr6 (3-39)||(32344700-32344736)
[»] chr2 (27 HSPs)
chr2 (2-59)||(43871013-43871070)
chr2 (1-59)||(34034409-34034467)
chr2 (1-54)||(29035035-29035088)
chr2 (1-60)||(2304349-2304408)
chr2 (1-60)||(44187763-44187822)
chr2 (1-59)||(44422166-44422224)
chr2 (1-60)||(580760-580819)
chr2 (1-60)||(17154708-17154767)
chr2 (6-48)||(36106884-36106926)
chr2 (1-57)||(8234772-8234828)
chr2 (1-42)||(21970434-21970475)
chr2 (1-54)||(5901812-5901867)
chr2 (1-56)||(11837048-11837103)
chr2 (1-41)||(32527073-32527113)
chr2 (1-59)||(11133135-11133193)
chr2 (2-45)||(13019284-13019327)
chr2 (1-59)||(32891340-32891398)
chr2 (6-59)||(3179388-3179441)
chr2 (1-57)||(3037602-3037658)
chr2 (1-54)||(23403365-23403418)
chr2 (4-60)||(34018047-34018103)
chr2 (7-60)||(15625262-15625317)
chr2 (3-48)||(19208863-19208910)
chr2 (1-60)||(19905632-19905691)
chr2 (5-50)||(23405262-23405309)
chr2 (4-59)||(32943401-32943456)
chr2 (2-59)||(34107554-34107613)
[»] scaffold0809 (1 HSPs)
scaffold0809 (2-60)||(4783-4841)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-59)||(7135-7193)
[»] chr7 (24 HSPs)
chr7 (5-60)||(24397008-24397063)
chr7 (1-56)||(31475821-31475876)
chr7 (2-59)||(41139147-41139204)
chr7 (1-52)||(19126796-19126847)
chr7 (1-60)||(28914852-28914913)
chr7 (7-47)||(14818355-14818395)
chr7 (7-47)||(15265353-15265393)
chr7 (1-60)||(41417252-41417311)
chr7 (4-59)||(47635112-47635166)
chr7 (1-60)||(34948165-34948224)
chr7 (1-59)||(4169135-4169193)
chr7 (7-48)||(24304272-24304313)
chr7 (1-59)||(48258160-48258220)
chr7 (1-56)||(21285334-21285389)
chr7 (1-60)||(29658249-29658308)
chr7 (1-59)||(33202532-33202590)
chr7 (2-60)||(38451923-38451981)
chr7 (1-60)||(3961383-3961444)
chr7 (7-54)||(8859781-8859830)
chr7 (1-60)||(48433685-48433746)
chr7 (3-59)||(22706006-22706062)
chr7 (4-60)||(27454073-27454132)
chr7 (4-59)||(27907874-27907929)
chr7 (4-56)||(37129340-37129392)
[»] scaffold0227 (1 HSPs)
scaffold0227 (2-60)||(21909-21966)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-55)||(17913-17967)
[»] scaffold0102 (1 HSPs)
scaffold0102 (14-59)||(31233-31277)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-58)||(108340-108397)
[»] scaffold0070 (1 HSPs)
scaffold0070 (4-43)||(12627-12666)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-59)||(419771-419831)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 74 - 255
Target Start/End: Complemental strand, 44105178 - 44104998
Alignment:
Q  74 tatttgttactcaagatcatgccctggatgcctttccaatatctgctgatggctccaagctgagagtgaccatttttatagaacagaaatcgtagtagtt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44105178 tatttgttactcaagatcatgccctggatgcctttccaatatctgctgatggctccaagctgagagtgaccatttttatagaacagaaatcgtagtagtt 44105079  T
Q  174 ctataactactgtatcaacgtcattgtttctctgctttcatccaatcagcaatgattgctttttcttctaccgtggtctgtg 255  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44105078 ctataact-ctgtatcaacgtcattgtttctctgctttcatccaatcagcaatgattgctttttcttctaccgtggtctgtg 44104998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27183717 - 27183658
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27183717 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 27183658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9625042 - 9625101
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9625042 ccccggacaccccacttattcactttaaaagtgaatttctagccactagactacctgacc 9625101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36476418 - 36476477
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36476418 ccccgaacaccccacttattcactttaaaagtgaattcctagccactaggctacctgacc 36476477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52030180 - 52030239
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  52030180 ccccggacaccctacttattcactttaaaagtgaatttttagccactaggctacctgacc 52030239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10959192 - 10959250
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10959192 ccccggacaccccacttattcactttaaaagtgaatttctagtcactagactacctgac 10959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24559448 - 24559506
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  24559448 ccccggacaccccacttattcactttaaaagtgaatttctaaccactaggttacctgac 24559506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24136788 - 24136727
Alignment:
Q  1 ccccggacaccccacttattcactttaaaa--gtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  24136788 ccccggacaccccacttattcactttaaaaaggtgaatttctagccactaggctacttgacc 24136727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 32453552 - 32453502
Alignment:
Q  8 caccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32453552 caccccacttattcactttaaaagtgaatttctagtcactaggctacctga 32453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 42824018 - 42823966
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  42824018 cggacaccctacttattcactttaaaagtgaatttctagccactagactacct 42823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14868744 - 14868799
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  14868744 ccccgaacaccccacttattcactttaaaagtgaaattctagccactaggttacct 14868799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 7448391 - 7448341
Alignment:
Q  9 accccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7448391 accccacttattcacttcaaaagtgaatttctagccactagactacctgac 7448341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 7456533 - 7456483
Alignment:
Q  9 accccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7456533 accccacttattcacttcaaaagtgaatttctagccactagactacctgac 7456483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 38555058 - 38555006
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  38555058 acacctcacttattcactttaaaagtgaatttctagccaccagactacctgac 38555006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36331762 - 36331704
Alignment:
Q  1 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  36331762 ccccggacaccccacttattcactttaaaaagtgaa-ttctagccactagactacctgac 36331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3784129 - 3784187
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||  |||||||||    
T  3784129 ccccggacaccccaccttttcattttaaaagtgaatttctagccactaaactacctgac 3784187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33206816 - 33206875
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||    
T  33206816 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgacc 33206875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 46328960 - 46328901
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  46328960 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgacc 46328901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 50724429 - 50724484
Alignment:
Q  4 cggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  50724429 cggacaccccacttattcaccttaaaaagtgaa-ttctagccactaggctacctgac 50724484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 50788419 - 50788364
Alignment:
Q  4 cggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  50788419 cggacaccccacttattcaccttaaaaagtgaatt-ctagccactaggctacctgac 50788364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34344814 - 34344756
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  34344814 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 34344756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3955367 - 3955424
Alignment:
Q  1 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctga 58  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||    
T  3955367 ccccggacaccccacttattcactttaaaaagtgaa-ttctagccactaaactacctga 3955424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8931013 - 8930952
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| || ||||||||||  ||||||| ||||||||| |||||    
T  8931013 ccccggacaccccacttattcacctttaaagtgaatttctctagccgctaggctacttgacc 8930952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 36763491 - 36763552
Alignment:
Q  2 cccggacaccccacttattca-ctttaaaa--gtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||| |||||    
T  36763491 cccggacaccccacttattcatctttaaaaaggtgaatttctagccactagactacttgacc 36763552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 44671529 - 44671587
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| ||| |||||||||||||||||||||||||||||||  || ||| ||||||||||    
T  44671529 cccgaacatcccacttattcactttaaaagtgaatttctattcattagactacctgacc 44671587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 45118711 - 45118756
Alignment:
Q  10 ccccacttattcactttaaaag-tgaatttctagccactaggctac 54  Q
    ||||||||||||||||||| || |||||||||||||||||||||||    
T  45118711 ccccacttattcactttaagaggtgaatttctagccactaggctac 45118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14417927 - 14417986
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||||| |||||||||||    
T  14417927 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactaagctacctgacc 14417986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 28226222 - 28226178
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccac 46  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||    
T  28226222 cccgaacaccccacttattcactttaaaagtaaatttgtagccac 28226178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 35140779 - 35140835
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    ||||||||||||| |||||||| ||| |||| || ||||||||||||| ||||||||    
T  35140779 cccggacaccccaattattcaccttataagttaaattctagccactagactacctga 35140835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 44976642 - 44976690
Alignment:
Q  11 cccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||  |||||||||| ||| |||||    
T  44976642 cccacttattcactttaaaagtgaattcttagccactagtctatctgac 44976690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47191432 - 47191491
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||| ||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||    
T  47191432 ccccgaacaccccacttattcaccttataagatgaa-ttctagccactaggctacctgacc 47191491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 43566827 - 43566773
Alignment:
Q  6 gacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  43566827 gacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgacc 43566773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 35483329 - 35483383
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    |||||||||||||||||||||| ||| |||  || ||||||||||||| ||||||    
T  35483329 cccggacaccccacttattcaccttataaggtaaattctagccactagactacct 35483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 41460385 - 41460336
Alignment:
Q  2 cccggacaccccacttattcacttta--aaagtgaatttctagccactag 49  Q
    |||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  41460385 cccggataccccacttattcaccttataaaagtgaatttctagccactag 41460336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 43598863 - 43598897
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttcta 41  Q
    |||||||||||||||||||||||| ||||||||||    
T  43598863 acaccccacttattcactttaaaaatgaatttcta 43598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47864695 - 47864756
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  || || |||||||  ||||||||||||||||| |||||    
T  47864695 ccccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgacc 47864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27394566 - 27394626
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| || || |||||||  ||||||| ||||||||| ||||    
T  27394566 ccccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgac 27394626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 31419648 - 31419681
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttct 40  Q
    ||||||||||||||||| ||||||||||||||||    
T  31419648 acaccccacttattcaccttaaaagtgaatttct 31419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40160794 - 40160849
Alignment:
Q  1 ccccggacaccccacttattca-ctttaaaa--gtgaatttctagccactaggctac 54  Q
    |||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||    
T  40160794 ccccggacaccccacttattcacctttaaaaaggtgaa-ttctagccactaggctac 40160849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45431686 - 45431741
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaattt--ctagccactaggctac 54  Q
    ||||||||||||||||||||||| || || ||||||||  |||||| |||||||||    
T  45431686 ccccggacaccccacttattcacctttaaggtgaatttccctagccgctaggctac 45431741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49146143 - 49146190
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccacta 48  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  49146143 ccccggacaccccacttattcactttataaggtgaa-ttctagccacta 49146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2800078 - 2800137
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2800078 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 2800137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 35253858 - 35253801
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35253858 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 35253801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31129361 - 31129419
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31129361 ccccggacaccccacttattcactttaaaagtgaatttttagccactaggctacctgac 31129419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 1588829 - 1588885
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1588829 cggacaccccacttattcactttaaaagtgaatttctagccactatgctacctgacc 1588885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 10292414 - 10292469
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10292414 cggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 10292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38790608 - 38790549
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38790608 ccccagacaccccacttattcactttaaaagtgaatttctaggcactaggctacctgacc 38790549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2696592 - 2696650
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2696592 ccccggacaccccacttattcactttaaaagtgaatttctgaccactaggctacctgac 2696650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 35301197 - 35301141
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  35301197 ccggacaccctacttattcactttaaaagtgaatttctagccactagactacctgac 35301141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7314792 - 7314851
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  7314792 ccccggacaccccacttattcactttaaaagtgaattcctagtcactaggctatctgacc 7314851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 10310342 - 10310400
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  10310342 cccggacaccccacttattcactttaaaagtgaatttctagccattagactatctgacc 10310400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 18009739 - 18009692
Alignment:
Q  13 cacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18009739 cacttattcactttaaaagtgaatttctagccattaggctacctgacc 18009692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43508484 - 43508435
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactagg 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43508484 ccccggacaccccacttattcaccttaaaggtgaatttctagccactagg 43508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22426460 - 22426518
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||| ||||||||| ||||||||||||||||||||||  || |||||||||||||||||    
T  22426460 cccctgacaccccatttattcactttaaaagtgaattcttaaccactaggctacctgac 22426518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 39165041 - 39165099
Alignment:
Q  3 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||    
T  39165041 ccggacaccccacttattcaccttaagaggtgaatttctagccactaggctacttgacc 39165099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 171286 - 171344
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||| ||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||    
T  171286 ccccagacaccccactcattcattttaaaagtaaatttctagcaactacgctacctgac 171344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5323981 - 5324039
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||| || || |||||||||||||||||||||||||| |||||| |||| |||||    
T  5323981 ccccggactcctcagttattcactttaaaagtgaatttctaaccactaagctatctgac 5324039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 8402335 - 8402284
Alignment:
Q  10 ccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||| |||| || ||||||||||||||||||||||| |||||    
T  8402335 ccccacttattcaccttaagaggtgaatttctagccactaggctacttgacc 8402284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23239183 - 23239241
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| ||||||||||| || ||||||| |||||||||    
T  23239183 ccccggacaccccacttattcaccttataaagtgaattt-taaccactagactacctgac 23239241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14010808 - 14010750
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| |||  || |||||||||||| |||| |||||    
T  14010808 ccccggacaccccacttattcaccttataaggtaaattctagccactaagctatctgac 14010750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 14352845 - 14352791
Alignment:
Q  6 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||| || |||||||| ||| ||||| | ||||||||||||||||||||||||    
T  14352845 gacacctcatttattcaccttataagtggaattctagccactaggctacctgacc 14352791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17855708 - 17855769
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaa--tttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||| ||||| ||| |||||    
T  17855708 ccccggacaccccacttattcacatttaaagtgaatttttctagccgctaggttacttgacc 17855769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 36359753 - 36359696
Alignment:
Q  2 cccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||| |||||||||    
T  36359753 cccggacaccccacttattcaccttataaggtgaatt-ctagccactagactacctgac 36359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 39258643 - 39258697
Alignment:
Q  5 ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||  ||| |||  || |||||||||||||||||||||||    
T  39258643 ggacaccccacttattcatcttataaggtaaattctagccactaggctacctgac 39258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1360170 - 1360111
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    |||||||||||||||||||||| ||| ||||||||||  |||| |||||||||||| ||||    
T  1360170 ccccggacaccccacttattca-ttttaaagtgaatttctctaaccactaggctacttgac 1360111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 7649593 - 7649645
Alignment:
Q  7 acaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  7649593 acaccccacttattcaccttacaaggtgaa-ttctagccactaggctacctgac 7649645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 10557502 - 10557457
Alignment:
Q  4 cggacaccccacttattcactttaaaag-tgaatttctagccacta 48  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||    
T  10557502 cggacaccccacttatccaccttaaaagttgaatttctagccacta 10557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 24074568 - 24074624
Alignment:
Q  4 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||| ||||||||||| ||| || ||||| ||||||||||||||||||||||||    
T  24074568 cggacacctcacttattcaccttataaggtgaa-ttctagccactaggctacctgacc 24074624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 42762065 - 42762010
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||| || || ||||| ||||||||||||| |||||||||    
T  42762065 cccggacaccccacttattcacctt-aaggtgaa-ttctagccactagactacctgac 42762010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 43468739 - 43468683
Alignment:
Q  3 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||||| |||||    
T  43468739 ccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctatctgac 43468683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4798577 - 4798518
Alignment:
Q  1 ccccggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||| |||  || ||||| ||||||||||||| ||||||||||    
T  4798577 ccccggacaccccacttattcaccttgtaaggtgaa-ttctagccactagactacctgacc 4798518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25689424 - 25689365
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||| ||||| |||| ||| |||||||||| ||| ||||||||||||||||||    
T  25689424 ccccggacaccctacttaatcaccttataaagtgaatt-ctaaccactaggctacctgacc 25689365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 36815492 - 36815460
Alignment:
Q  9 accccacttattcactttaaaagtgaatttcta 41  Q
    ||||||||||||||||| |||||||||||||||    
T  36815492 accccacttattcacttcaaaagtgaatttcta 36815460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 39172248 - 39172189
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctacctgac 59  Q
    ||||||||||||| |||||||| || ||||||||||||  ||||| ||||||||| ||||    
T  39172248 cccggacaccccatttattcacctttaaagtgaatttctttagcccctaggctacttgac 39172189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8690273 - 8690332
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8690273 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 8690332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9693021 - 9693080
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9693021 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 9693080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28520767 - 28520708
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28520767 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 28520708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14149852 - 14149910
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14149852 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 14149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 48968246 - 48968188
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48968246 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 48968188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53815755 - 53815814
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53815755 ccccggacaccccacttattcactataaaagtgaatttctagccactaggctacctgacc 53815814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 15640474 - 15640420
Alignment:
Q  6 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15640474 gacaccccacttattcactttaaaagtgaatttctagccactagactacctgacc 15640420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36954196 - 36954254
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  36954196 ccccggacaccccatttattcactttaaaagtgaatttctagctactaggctacctgac 36954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 52031266 - 52031324
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52031266 ccccagacaccccacttattcactttaaaagtgaatttctagccactatgctacctgac 52031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46799466 - 46799520
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 55  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  46799466 ccccggacaccccatttattcactttaaaagtgaatttctagccactagactacc 46799520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 53355002 - 53354944
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  53355002 ccccggacaccccacttatttactttaaaaatgaatttctaaccactaggctacctgac 53354944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42411490 - 42411430
Alignment:
Q  1 ccccggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  42411490 ccccggacaccccacttatttactttaaaaagtgaatttctagccactaggctacttgacc 42411430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40150532 - 40150591
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  40150532 ccccggacacctcacttattcactttaaaagtgaatttctatccattagactacctgacc 40150591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 52330943 - 52330886
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||    
T  52330943 ccggacaccccacttattcactttaaaagtgaatttccaaccactaagctacttgacc 52330886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 5909814 - 5909760
Alignment:
Q  6 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| |||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  5909814 gacatcccacttattcactttaaaaatgaatttctaaccactaagctacctgacc 5909760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36257753 - 36257806
Alignment:
Q  1 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctac 54  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  36257753 ccccggacaccccacttattcactttaaaaagtgaa-ttctagccactaggctac 36257806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 56546480 - 56546427
Alignment:
Q  6 gacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  56546480 gacaccccacttattcactttaaaaagtgaa-ttctagccactaggctacctgac 56546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7768824 - 7768772
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 53  Q
    |||||||||||||||||||||||||||||| |||| |||||| || |||||||    
T  7768824 ccccggacaccccacttattcactttaaaaatgaaattctagtcattaggcta 7768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 27296896 - 27296940
Alignment:
Q  16 ttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  27296896 ttattcactttaaaagtaaatttctagccactagactacctgacc 27296940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 46799569 - 46799613
Alignment:
Q  15 cttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||    
T  46799569 cttattcactttaaaagtgaatttctaaccactagactacctgac 46799613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 48501688 - 48501636
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||    
T  48501688 acaccccacttattcactttaaaagtgaattcctaaccagtagactacctgac 48501636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 26708583 - 26708534
Alignment:
Q  6 gacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  26708583 gacacctcacctattcactttaaa-gtgaatttctagccactaggctacct 26708534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 31578077 - 31578134
Alignment:
Q  2 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  31578077 cccggacaccccacttattcacattataaggtgaa-ttctagccactaggctacctgac 31578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30616059 - 30616111
Alignment:
Q  1 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggcta 53  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  30616059 ccccggacaccccacttattcactttaaaaagtgaa-ttctagtcactaggcta 30616111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 31156254 - 31156198
Alignment:
Q  3 ccggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacctgac 59  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  31156254 ccggataccgcacttattcactttaaaaagtgaatt-ctagccactaggctacctgac 31156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30295572 - 30295631
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    |||| |||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||    
T  30295572 ccccagacaccccacttattcaccttagaaggtgaa-ttctagccactaggctacctgacc 30295631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30324474 - 30324533
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    |||| |||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||    
T  30324474 ccccagacaccccacttattcaccttagaaggtgaa-ttctagccactaggctacctgacc 30324533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37889642 - 37889587
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctac 54  Q
    ||||||||||| |||||||||||||| || |||||||  |||||||||||||||||    
T  37889642 ccccggacacctcacttattcacttttaaggtgaatttctctagccactaggctac 37889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20753161 - 20753103
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||| ||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  20753161 ccccggacaccacacttattcaccttataaggtgaatt-ctagccactaggctacctgac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30152173 - 30152231
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||| |||||||||||||    
T  30152173 ccccggacaccccacttattcaccttataaggtgaa-ttctagccaataggctacctgac 30152231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 46206650 - 46206701
Alignment:
Q  4 cggacaccccacttattcactttaa-aagtgaatttctagccactaggctac 54  Q
    |||||||||||||||||||| |||| | |||||||||||||||||| |||||    
T  46206650 cggacaccccacttattcaccttaagaggtgaatttctagccactatgctac 46206701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11491255 - 11491194
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  || || |||||||  ||||||||||||||||| |||||    
T  11491255 ccccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgacc 11491194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37574331 - 37574392
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    |||||| |||||||||||||||| || || |||||||  ||||||||||||||||| |||||    
T  37574331 ccccgggcaccccacttattcacctttaaggtgaatttctctagccactaggctacttgacc 37574392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 41003206 - 41003149
Alignment:
Q  3 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||| ||| ||| |||||| ||| ||||||||||||||||||    
T  41003206 ccggacaccccacttattcaccttacaagatgaatt-ctaaccactaggctacctgacc 41003149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 50815766 - 50815827
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||| ||||||  ||||| |||||||  ||||||||||||||||| |||||    
T  50815766 ccccggacaccccacatattcatcttaaaggtgaatttctctagccactaggctacttgacc 50815827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36993100 - 36993160
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttct--agccactaggctacctgac 59  Q
    |||||||||||||| |||||||  || || ||||||||||  |||||||||||||||||||    
T  36993100 ccccggacaccccaattattcatctttaaggtgaatttctctagccactaggctacctgac 36993160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 43143781 - 43143837
Alignment:
Q  3 ccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||| ||| ||||||||||| |||  |||||||||||||||    
T  43143781 ccggacaccccacttattcaccttataaagtgaattt-tagagactaggctacctgac 43143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 44074913 - 44074969
Alignment:
Q  2 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 58  Q
    |||||||||||||||||||||| ||| || |||||||| |||||| ||||||||||||    
T  44074913 cccggacaccccacttattcaccttataaggtgaattt-tagccattaggctacctga 44074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 56314823 - 56314875
Alignment:
Q  4 cggacaccccacttattcactttaaaa-gtgaatttctagccactaggctacct 56  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||    
T  56314823 cggacaccacacttattcacattaaaaggtgaa-ttctagccactaggctacct 56314875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3465642 - 3465697
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacct 56  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||||| ||||||    
T  3465642 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactagactacct 3465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10098184 - 10098243
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  ||| ||| |||| ||||||||||||| ||||||||||    
T  10098184 ccccggacaccccacttattcatcttataagatgaa-ttctagccactagactacctgacc 10098243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11872932 - 11872988
Alignment:
Q  1 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacct 56  Q
    ||||||||| || ||||||||||||| |||||| ||||| |||||| ||||||||||    
T  11872932 ccccggacatcctacttattcactttaaaaagtaaatttttagccattaggctacct 11872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29269351 - 29269292
Alignment:
Q  1 ccccggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||| |||  |  |||||||| |||||||||||||||||||||    
T  29269351 ccccggacaccccacttattcatcttatatggtgaattt-tagccactaggctacctgacc 29269292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40678882 - 40678941
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40678882 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 40678941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 13870116 - 13870059
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13870116 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 13870059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17350120 - 17350172
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17350120 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 17350172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 17954893 - 17954841
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17954893 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 17954841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 47763418 - 47763362
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47763418 cggacatcccacttattcactttaaaagtgaatttctagccactaggctacctgacc 47763362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19976588 - 19976533
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19976588 ccccggacaccccacatattcactttaaaagtgaatttctagccactaggctacct 19976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25819244 - 25819303
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25819244 ccccggataccccacttattcactttaaaagtgaatttctagccactagactacctgacc 25819303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39238775 - 39238834
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  39238775 ccccggacaccccacttattcactttaaaagtgaatttctagccgctaggctatctgacc 39238834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 35111714 - 35111767
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  35111714 acaccccacttattcactttaaaagtgaatttctagccactacgctagctgacc 35111767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52833142 - 52833085
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  52833142 ccccggacatcccatttattcactttaaaagtgaatttctagacactaggctacctga 52833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29491529 - 29491580
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 53  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29491529 ccccggacaccccacttattcacttt-aaagtgaatttctagccactaggcta 29491580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38021311 - 38021369
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||    
T  38021311 ccccggacaccccacttattcactttaaaagtgaatttttagcgaatagggtacctgac 38021369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 2044982 - 2044941
Alignment:
Q  19 ttcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2044982 ttcactttaaaagtgaatttctagccactaggctacctgacc 2044941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 29106902 - 29106846
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||    
T  29106902 ccggacaccccatttattcacttgaaaagtgaatttctagccaccaggttacctgac 29106846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32635199 - 32635258
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||    
T  32635199 ccccggacaccccacttattcaccttaagaggtgaatttctagccactaggctacttgac 32635258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12553253 - 12553314
Alignment:
Q  1 ccccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||   ||| ||||| ||||||||||||||||||||||||    
T  12553253 ccccggacaccccacttattcactttgaaaaaggtgaa-ttctagccactaggctacctgacc 12553314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15368864 - 15368923
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||    
T  15368864 ccccggacaccccacttattcattttataaggtgaa-ttctagccactaggctacctgacc 15368923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32660889 - 32660948
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||| ||||| |||| || ||||||||||||||||||||||| ||||    
T  32660889 ccccggacaccccactttttcaccttaagaggtgaatttctagccactaggctacttgac 32660948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38019983 - 38019925
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    |||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  38019983 ccccagacaccccacttattcaccttataaagtgaatt-ctagccactaggctacctgac 38019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 12675768 - 12675726
Alignment:
Q  12 ccacttattcactttaaaagtgaatttctagccactaggctac 54  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  12675768 ccacttattcactttaaaagtgaatttctaaccactagactac 12675726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 49620031 - 49620092
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  || ||||||||||  ||||||||||||||||| |||||    
T  49620031 ccccggacaccccacttattcatctttaaagtgaatttctctagccactaggctacttgacc 49620092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23368768 - 23368708
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||||| |||||||  |||||||||||| |||| ||||    
T  23368768 ccccggacaccccacttattcacattaaaggtgaatttatctagccactagtctacttgac 23368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15774348 - 15774289
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||| |||||||||||    
T  15774348 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaagctacctgacc 15774289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 19516511 - 19516479
Alignment:
Q  14 acttattcactttaaaagtgaatttctagccac 46  Q
    |||||||||||||||||||||||||||||||||    
T  19516511 acttattcactttaaaagtgaatttctagccac 19516479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50859403 - 50859344
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||| |||||    
T  50859403 ccccggacaccccacatattcaccttaaaaggtgaatt-ctagccactaggctacttgacc 50859344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3533010 - 3532952
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||    
T  3533010 ccccggacaccccacttattcaccttataaggtgaatt-ctagctactaggctacctgac 3532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 4354138 - 4354084
Alignment:
Q  4 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 58  Q
    |||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  4354138 cggacaccccacttattcaccttataaagtgaa-ttctagccaccaggctacctga 4354084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11405515 - 11405573
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||||| ||||||||||    
T  11405515 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactaagctacctgac 11405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19793585 - 19793643
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| || ||||| ||||| |||||||||||||||||    
T  19793585 ccccggacaccccacttattcaccttataaggtgaa-ttctaaccactaggctacctgac 19793643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35593822 - 35593880
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||| ||||||||||||||    
T  35593822 ccccggacaccccacttattcaccttataaggtgaa-ttctagccgctaggctacctgac 35593880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37733814 - 37733872
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| || ||||| ||||| |||||||||||||||||    
T  37733814 ccccggacaccccacttattcaccttataaggtgaa-ttctaaccactaggctacctgac 37733872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42946503 - 42946464
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttct 40  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  42946503 ccccggacaccccacttattcaccttaaaggtgaatttct 42946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19424105 - 19424166
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| || || |||||||  ||||||| ||||||||| |||||    
T  19424105 ccccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgacc 19424166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29332343 - 29332404
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| || || |||||||  ||||||| ||||||||| |||||    
T  29332343 ccccggacaccccacttattcacctttaaggtgaatttctctagccgctaggctacttgacc 29332404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 29936715 - 29936662
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctac 54  Q
    ||||||||||||||||||||  |||||||||||||  |||||||| ||||||||    
T  29936715 ccggacaccccacttattcatcttaaaagtgaatttctctagccattaggctac 29936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32585407 - 32585465
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||| |||| || | | ||||||||||||||| |||||||| ||||    
T  32585407 ccccggacaccccactttttcatttaagaggtgaatttctagccattaggctacttgac 32585465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2350411 - 2350351
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctacctgac 59  Q
    ||||| ||||||||||||||||| || ||||||||||||  ||||| ||||||||| ||||    
T  2350411 ccccgaacaccccacttattcacctttaaagtgaatttctttagccgctaggctacttgac 2350351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 4616937 - 4616989
Alignment:
Q  6 gacaccccacttattcacttta-aaagtgaatttctagccactaggctacctga 58  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||    
T  4616937 gacaccccacttattcaccttataaagtgaa-ttctagccactagactacctga 4616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3341772 - 3341711
Alignment:
Q  1 ccccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||   ||| ||||| |||||||||||||||| |||||||    
T  3341772 ccccggacaccccacttattcaccttgaaaaaggtgaa-ttctagccactaggctgcctgacc 3341711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 7438682 - 7438741
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctacctgacc 60  Q
    ||||||||||||||||||||  ||||| |||||||||  |||||||||| |||| |||||    
T  7438682 ccggacaccccacttattcatcttaaaggtgaatttctttagccactagactacttgacc 7438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9768845 - 9768784
Alignment:
Q  1 ccccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||   ||| ||||| ||||||| ||||||||||||||||    
T  9768845 ccccggacaccccacttattcaccttgaaaaaggtgaa-ttctagctactaggctacctgacc 9768784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 9976418 - 9976361
Alignment:
Q  3 ccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctga 58  Q
    ||||||||||||||||||||| ||   ||||||||| |||||||||||| |||||||||    
T  9976418 ccggacaccccacttattcaccttgaaaaaagtgaa-ttctagccactacgctacctga 9976361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 39433420 - 39433475
Alignment:
Q  4 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||||||| ||||||    
T  39433420 cggacaccccacttattcaccttataaggtgaa-ttctagccactaggctgcctgac 39433475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 41677121 - 41677178
Alignment:
Q  3 ccggacaccccacttattcactttaaaa---gtgaatttctagccactaggctacctga 58  Q
    ||||||||||||||||||||| || |||   ||||||| ||||||||||||||||||||    
T  41677121 ccggacaccccacttattcaccttgaaaaaggtgaatt-ctagccactaggctacctga 41677178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 46116210 - 46116151
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||| |||||||| ||| ||| |||||| ||| ||||||||||||||||||    
T  46116210 ccccggacaccccaattattcaccttataaggtgaatt-ctaaccactaggctacctgacc 46116151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 20735210 - 20735152
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20735210 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 20735152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1463930 - 1463988
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1463930 ccccggacaccccacttattcactttaaaagtgaatttctagccaccaggctacctgac 1463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18303114 - 18303056
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18303114 ccccgaacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 18303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 38230240 - 38230184
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  38230240 cccggacacctcacttattcactttaaaagtgaatttctagccactatgctacctga 38230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4674851 - 4674792
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  4674851 ccccggacaccccacttattcactttaaaagtgaatttctaaccactaaactacctgacc 4674792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36045170 - 36045112
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  36045170 ccccggacaccccacttattcactttaaaagtgaatttctaaccaataggccacctgac 36045112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 37417161 - 37417108
Alignment:
Q  6 gacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  37417161 gacaccccacttactcactttaaaagtgaatttctagccactaggctatctgac 37417108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 25346244 - 25346296
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 54  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  25346244 cccggacaccccacgtattcactttaaaagtgaatttctagccactaagctac 25346296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10943775 - 10943832
Alignment:
Q  1 ccccggacaccccacttattcacttt-aaaagtgaatttctagccactaggctacctga 58  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10943775 ccccggacaccccacttattcactttaaaaagtgaa-ttctagccactaggctacctga 10943832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 37303997 - 37304050
Alignment:
Q  5 ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  37303997 ggacaccccacttattcactttaaaa-tgaatttatagccactaggctacctgac 37304050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 30733181 - 30733238
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||    
T  30733181 ccggacactccacttattcacttgaaaaataaatttctagccactaggctacctgacc 30733238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 6447513 - 6447457
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||    
T  6447513 cggacaccccacttattcactttaaaaatgaatttctaaccactacactacctgacc 6447457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 843404 - 843346
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  843404 ccccggacaccccacttattcaccttataaattgaatt-ctagccactaggctacctgac 843346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29096344 - 29096286
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  29096344 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17077420 - 17077480
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||  ||||| |||||||  ||||||||||||||||| ||||    
T  17077420 ccccggacaccccacttattcatcttaaaggtgaatttatctagccactaggctacttgac 17077480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42355732 - 42355793
Alignment:
Q  1 ccccggacaccccacttattca-ctttaa-aagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||| |||||||| |||||    
T  42355732 ccccggacaccccacttattcacctttaagaggtgaatttctagccattaggctacttgacc 42355793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3535972 - 3535912
Alignment:
Q  1 ccccggacaccccacttattcacttt---aaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||   ||||||||| ||||| |||||||||||||||||    
T  3535972 ccccggacaccccacttattcaccttaaaaaaagtgaa-ttctaaccactaggctacctgac 3535912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18872580 - 18872637
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||    
T  18872580 ccccgaacaccccacttattcaccttaag-gtgaatt-ctagccactaggctacctgacc 18872637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28537194 - 28537254
Alignment:
Q  1 ccccggacaccccacttattcactttaaaa---gtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||| |||   ||||| |||||||||||||||||| ||||    
T  28537194 ccccggacaccccacttattcactttgaaaatggtgaa-ttctagccactaggctacttgac 28537254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32158450 - 32158392
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||| ||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  32158450 ccccgaacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgac 32158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 1185891 - 1185849
Alignment:
Q  10 ccccacttattcactttaaaagtgaatttctagccactaggct 52  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||    
T  1185891 ccccacttattcaccttaaaagtgaaattctagctactaggct 1185849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29841407 - 29841465
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||| | ||| |||  || ||||||||| |||||||||||||    
T  29841407 ccccggacaccccacttattccccttataaggtaaattctagccattaggctacctgac 29841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38618717 - 38618660
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctga 58  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||||    
T  38618717 ccccggacaccccacttattcaccttataaggtgaatt-ctagcaactaggctacctga 38618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1244763 - 1244704
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||| |||||||||||||||||| ||| ||| |||||| |||||||||||| |||||||||    
T  1244763 ccccagacaccccacttattcaccttataaggtgaatt-ctagccactaggttacctgacc 1244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 9577360 - 9577411
Alignment:
Q  9 accccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||| ||| || ||||| ||||||||||||||||||||||||    
T  9577360 accccacttattcaccttataaggtgaa-ttctagccactaggctacctgacc 9577411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 36091341 - 36091309
Alignment:
Q  12 ccacttattcactttaaaagtgaatttctagcc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  36091341 ccacttattcactttaaaagtgcatttctagcc 36091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42455430 - 42455375
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacct 56  Q
    |||||||||| |||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  42455430 ccccggacactccacttattcaccttataaggtgaatt-ctagccactaggctacct 42455375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29284177 - 29284234
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29284177 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 29284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 14981734 - 14981680
Alignment:
Q  5 ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14981734 ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 14981680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33628977 - 33628925
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33628977 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggcta 33628925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9064925 - 9064984
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9064925 ccccagacaccccacttatttactttaaaagtgaatttctagccactaggctacctgacc 9064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11636745 - 11636804
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  11636745 ccccggacaccccactttttcattttaaaagtgaatttctaaccactaggctacctgacc 11636804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24470427 - 24470370
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24470427 ccccggaaatcccacttattcactttaaaagtgaatttctagccaataggctacctga 24470370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6658579 - 6658521
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||||| ||||    
T  6658579 ccccggacaccccacttattctccttaaaagagaatttctagccactaggctacttgac 6658521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6144023 - 6144082
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| | ||||| ||||    
T  6144023 ccccggacaccccacttattcactttaaaactgaatttctggccactggactaccagacc 6144082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25020564 - 25020505
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  25020564 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgacc 25020505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12089156 - 12089215
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||||||| |||||||||    
T  12089156 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggatacctgacc 12089215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 18904715 - 18904660
Alignment:
Q  5 ggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  18904715 ggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgacc 18904660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 21507235 - 21507192
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttctagccact 47  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  21507235 ccggacaccccacttattcactttataagtgaa-ttctagccact 21507192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 5134465 - 5134411
Alignment:
Q  6 gacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  5134465 gacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctgacc 5134411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6228296 - 6228235
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  || || |||||||  ||||||||||||||||| |||||    
T  6228296 ccccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgacc 6228235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 10424570 - 10424513
Alignment:
Q  2 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||||| ||| ||||| |||| ||||||||| |||||||||||    
T  10424570 cccggacaccccacttattcaccttataaagtaaatt-ctagccacttggctacctgac 10424513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18903403 - 18903342
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  || || |||||||  ||||||||||||||||| |||||    
T  18903403 ccccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgacc 18903342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3448411 - 3448470
Alignment:
Q  1 ccccggacaccccacttattca-ctttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||| |||  || ||||| ||||||||| ||||||||||||||    
T  3448411 ccccggacaccccacttattcatcttataaggtgaa-ttctagccaataggctacctgacc 3448470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 15869099 - 15869040
Alignment:
Q  2 cccggacaccccacttattcactttaaaa--gtgaatttctagccactaggctacctgac 59  Q
    ||||||| || ||||||||||| ||||||  |||| ||||||||||||||||||| ||||    
T  15869099 cccggactcctcacttattcaccttaaaaaggtgagtttctagccactaggctacttgac 15869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 18991471 - 18991420
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||  || ||||||| |||||||||||||||| ||||    
T  18991471 acaccccacttattcacttataaggtgaatt-ctagccactaggctacttgac 18991420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 32344700 - 32344736
Alignment:
Q  3 ccggacaccccacttattcactttaaaagtgaatttc 39  Q
    ||||||||||||||||||||| || ||||||||||||    
T  32344700 ccggacaccccacttattcacctttaaagtgaatttc 32344736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 43871013 - 43871070
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43871013 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 43871070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34034409 - 34034467
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34034409 ccccggacaccccacttattcactttaaaagtgaatttctagccactagactacctgac 34034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29035035 - 29035088
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29035035 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 29035088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2304349 - 2304408
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  2304349 ccccggacaccccacttatttactttaaaagtgaatttctaaccactaggctacctgacc 2304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44187763 - 44187822
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  44187763 ccccagacaccccacttattcactttaaaagtgaatttttagccactaaactacctgacc 44187822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44422166 - 44422224
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||||| |||  || ||||| |||||||||||||||||    
T  44422166 ccccggacaccccacttattcactttataaggtaaattctaaccactaggctacctgac 44422224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 580819 - 580760
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  580819 ccccggacaccccacttattcaccttataagatgaatt-ctagccactaggctacctgacc 580760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17154708 - 17154767
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| |||   | ||||||||||||||||||||||||    
T  17154708 ccccggacaccccacttattcaccttataaggtgagttctagccactaggctacctgacc 17154767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 36106884 - 36106926
Alignment:
Q  6 gacaccccacttattcactttaaaagtgaatttctagccacta 48  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  36106884 gacactccatttattcactttaaaagtgaatttctagccacta 36106926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8234828 - 8234772
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctg 57  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||    
T  8234828 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacctg 8234772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21970475 - 21970434
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctag 42  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  21970475 ccccggataccccgcttattcactttaaaagtgaatttctag 21970434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5901867 - 5901812
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttc--tagccactaggctac 54  Q
    ||||||||||||||||||||||  ||||| |||||||||  |||||||||||||||    
T  5901867 ccccggacaccccacttattcatcttaaaggtgaatttctttagccactaggctac 5901812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11837048 - 11837103
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacct 56  Q
    ||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||    
T  11837048 ccccggacacctcacttattcaccttataaagtgaatt-ctagccactaggctacct 11837103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32527113 - 32527073
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttcta 41  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  32527113 ccccagacaacccacttattcactttaaaagtgaatttcta 32527073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11133135 - 11133193
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||||||| ||||||||    
T  11133135 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 13019284 - 13019327
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagcca 45  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||    
T  13019284 cccggacacaccacttattcaccttaaaggtgaatttctagcca 13019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32891340 - 32891398
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||||||    
T  32891340 ccccggacaccccacttattcatcttataagatgaatt-ctagccactaggctacctgac 32891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 3179388 - 3179441
Alignment:
Q  6 gacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  3179388 gacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3037658 - 3037602
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctg 57  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||| ||||||||||||||    
T  3037658 ccccggacaccccacttattcaccttataaggtgaatt-ctaggcactaggctacctg 3037602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23403365 - 23403418
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctac 54  Q
    |||||||  |||||||||||||| ||||| |||||||| |||||| ||||||||    
T  23403365 ccccggattccccacttattcaccttaaaggtgaatttatagccattaggctac 23403418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 34018103 - 34018047
Alignment:
Q  4 cggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||| ||| ||| |||||| ||| ||||||||||||||||||    
T  34018103 cggacaccccacttattcaccttataaggtgaatt-ctaaccactaggctacctgacc 34018047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 15625317 - 15625262
Alignment:
Q  7 acaccccacttattcactttaaaagtg--aatttctagccactaggctacctgacc 60  Q
    |||| |||||||||||| ||||| |||  ||||||||||||||||||||| |||||    
T  15625317 acactccacttattcaccttaaatgtgtgaatttctagccactaggctacttgacc 15625262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 19208910 - 19208863
Alignment:
Q  3 ccggacaccccacttattcactttaaaa--gtgaatttctagccacta 48  Q
    ||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  19208910 ccggacacctcacttattcactttaaaaatgtgaatttctaaccacta 19208863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19905691 - 19905632
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    |||||||||||| |||||||||| ||| ||| |||||| ||||||| ||||||||||||||    
T  19905691 ccccggacacccgacttattcaccttataaggtgaatt-ctagccattaggctacctgacc 19905632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 23405262 - 23405309
Alignment:
Q  5 ggacaccccacttattcactttaaaa--gtgaatttctagccactagg 50  Q
    ||||||||||||||||||| ||||||  ||||||||||||||| ||||    
T  23405262 ggacaccccacttattcaccttaaaaaggtgaatttctagccattagg 23405309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 32943401 - 32943456
Alignment:
Q  4 cggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||| ||| ||||| ||||| |||||||||| |||||||||    
T  32943401 cggacaccccacttattcaccttataaagtaaattt-tagccactagactacctgac 32943456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 34107554 - 34107613
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    |||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  34107554 cccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 34107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 4841 - 4783
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4841 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacttgacc 4783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7135 - 7193
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7135 ccccggacaccccatttattcactttaaaagtgaatttctagccactaggctacctgac 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 24397008 - 24397063
Alignment:
Q  5 ggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24397008 ggacaccctacttattcactttaaaagtgaatttctagccactaggctacctgacc 24397063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31475876 - 31475821
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31475876 cccctgacaccccacttattcactttaaaagtgaatttctagccactagactacct 31475821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 41139147 - 41139204
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41139147 cccggacacttcacttattcactttaaaagtgaatttctagccactaggctacttgac 41139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19126796 - 19126847
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggct 52  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19126796 ccccggacaccccacttattcactttaaaagtgaatttctaacgactaggct 19126847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28914913 - 28914852
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||    
T  28914913 ccccggacaccccacttattcactttaaaggtgaatttctctagccactaggctacttgacc 28914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14818395 - 14818355
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccact 47  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14818395 acaccccacttattcactttaaaagtgaatttctagccact 14818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 15265393 - 15265353
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccact 47  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15265393 acaccccacttattcactttaaaagtgaatttctagccact 15265353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41417311 - 41417252
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||    
T  41417311 ccccagacaccccacttattcactttaaaagtgaatttttagccattagactacttgacc 41417252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 47635112 - 47635166
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  47635112 cggacacctcatttattcactttaaaa-tgaatttctagccactaggctacctgac 47635166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34948165 - 34948224
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||    
T  34948165 ccccggacaccccacttattcaccttataaggtgaa-ttctagccactaggctacctgacc 34948224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4169135 - 4169193
Alignment:
Q  1 ccccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  4169135 ccccggacaccccacttattcaccttataaagtgaa-ttctagccactaggttacctgac 4169193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 24304313 - 24304272
Alignment:
Q  7 acaccccacttattcactttaaaagtgaatttctagccacta 48  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  24304313 acaccccatttattcactttaaaagtaaatttctagccacta 24304272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 48258220 - 48258160
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    |||||||||||||| |||||||| || ||||||||||  ||||||| ||||||||||||||    
T  48258220 ccccggacaccccatttattcacctttaaagtgaatttgtctagccgctaggctacctgac 48258160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21285389 - 21285334
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacct 56  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  21285389 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacct 21285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29658308 - 29658249
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||| |||||    
T  29658308 ccccggacaccccacttattcaccttataaggtgaatt-ctagccactaggctacttgacc 29658249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33202590 - 33202532
Alignment:
Q  1 ccccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||||||    
T  33202590 ccccggacaccccacttattcatcttataaggtgaatt-ctagccactaggctacctgac 33202532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 38451923 - 38451981
Alignment:
Q  2 cccggacaccccacttattcacttta-aaagtgaatttctagccactaggctacctgacc 60  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||||||| ||||||||||    
T  38451923 cccggacaccccacttattcacattataaggtgaa-ttctagccactagactacctgacc 38451981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3961444 - 3961383
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||| |||||||||||| |||||| |||||||  |||||| |||||||||| |||||    
T  3961444 ccccggacatcccacttattcattttaaaggtgaatttctctagctactaggctacttgacc 3961383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 8859781 - 8859830
Alignment:
Q  7 acaccccacttattcactttaaaa--gtgaatttctagccactaggctac 54  Q
    ||||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  8859781 acacctcacttattcaccttaaaatggtgaatttctagccactaggctac 8859830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48433746 - 48433685
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||||||  || || |||||||  ||||||||||||||||| |||||    
T  48433746 ccccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgacc 48433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 22706062 - 22706006
Alignment:
Q  3 ccggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||    
T  22706062 ccggacaccccacttattcaccttataagatgaatt-ctagctactaggctacctgac 22706006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 27454073 - 27454132
Alignment:
Q  4 cggacaccccacttattca-ctttaaaagtgaatt--tctagccactaggctacctgacc 60  Q
    ||||||||||||||||||| ||| ||| |||||||  ||||||||||||||||| |||||    
T  27454073 cggacaccccacttattcatcttaaaaggtgaatttctctagccactaggctacttgacc 27454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 27907929 - 27907874
Alignment:
Q  4 cggacaccccacttattcactttaaaag-tgaatttctagccactaggctacctgac 59  Q
    |||||||||||||||||||  ||| ||| ||||||| ||||||||||||||||||||    
T  27907929 cggacaccccacttattcatcttataaggtgaattt-tagccactaggctacctgac 27907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 37129392 - 37129340
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagccactaggctacct 56  Q
    |||||||||||||||||||| ||| |||  || ||||||||| ||||||||||    
T  37129392 cggacaccccacttattcaccttataaggtaaattctagccagtaggctacct 37129340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 21909 - 21966
Alignment:
Q  2 cccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctgacc 60  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  21909 cccgaacaccccacttattcactttaaaa-tgaatttctagccactagactacctgacc 21966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17967 - 17913
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacc 55  Q
    |||| ||||| ||||||||||||||||||| |||||| ||||||||||| |||||    
T  17967 ccccagacactccacttattcactttaaaattgaattcctagccactagactacc 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 31233 - 31277
Alignment:
Q  14 acttattcactttaaaagtgaatttctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  31233 acttattcactttaaaagtgaattt-tagccactagactacctgac 31277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 108397 - 108340
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatttctagccactaggctacctga 58  Q
    ||||||||||||||||||||||||||||||   || ||||||||| ||| ||||||||    
T  108397 ccccggacaccccacttattcactttaaaaagtaaattctagccagtagactacctga 108340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 12627 - 12666
Alignment:
Q  4 cggacaccccacttattcactttaaaagtgaatttctagc 43  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  12627 cggataccccatttattcactttaaaagtgaatttctagc 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 419771 - 419831
Alignment:
Q  1 ccccggacaccccacttattcactttaaaagtgaatt--tctagccactaggctacctgac 59  Q
    ||||||||||||||||||||||  || || |||||||  ||||||||||||||||| ||||    
T  419771 ccccggacaccccacttattcatctttaaggtgaatttctctagccactaggctacttgac 419831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University