View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4927-Insertion-1 (Length: 920)

Name: NF4927-Insertion-1
Description: NF4927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4927-Insertion-1
NF4927-Insertion-1
[»] chr1 (41 HSPs)
chr1 (240-918)||(21137392-21138071)
chr1 (240-918)||(23511347-23512028)
chr1 (241-768)||(21076445-21076977)
chr1 (241-664)||(50826372-50826792)
chr1 (240-678)||(21310708-21311147)
chr1 (235-678)||(29305197-29305643)
chr1 (229-664)||(21168055-21168485)
chr1 (241-664)||(31845376-31845801)
chr1 (282-659)||(22684399-22684776)
chr1 (452-664)||(4361567-4361784)
chr1 (452-648)||(2603413-2603610)
chr1 (476-664)||(4229812-4230000)
chr1 (229-633)||(21381759-21382155)
chr1 (241-632)||(27131731-27132111)
chr1 (472-664)||(27902012-27902204)
chr1 (524-664)||(22086392-22086533)
chr1 (474-678)||(22809015-22809220)
chr1 (229-330)||(22808775-22808877)
chr1 (532-664)||(41368671-41368803)
chr1 (498-664)||(1528625-1528792)
chr1 (478-659)||(27561896-27562078)
chr1 (532-664)||(41383578-41383710)
chr1 (509-658)||(21550522-21550670)
chr1 (255-330)||(22794188-22794264)
chr1 (229-326)||(41383249-41383347)
chr1 (255-330)||(22086748-22086824)
chr1 (465-657)||(16406718-16406910)
chr1 (255-330)||(27562235-27562311)
chr1 (141-248)||(46888502-46888609)
chr1 (229-326)||(16406494-16406591)
chr1 (255-330)||(1528374-1528450)
chr1 (240-315)||(4229574-4229649)
chr1 (474-585)||(22794415-22794526)
chr1 (255-326)||(41368371-41368443)
chr1 (255-326)||(2603228-2603299)
chr1 (509-658)||(18530545-18530693)
chr1 (241-326)||(27902317-27902399)
chr1 (255-313)||(22508752-22508812)
chr1 (596-650)||(22509072-22509126)
chr1 (141-183)||(26050084-26050126)
chr1 (255-312)||(21550855-21550912)
[»] chr2 (54 HSPs)
chr2 (240-918)||(31817654-31818334)
chr2 (241-918)||(22880679-22881360)
chr2 (252-918)||(16664408-16665082)
chr2 (241-749)||(39227170-39227679)
chr2 (255-657)||(34827372-34827761)
chr2 (456-659)||(22593739-22593942)
chr2 (255-664)||(21256220-21256611)
chr2 (492-663)||(22648567-22648739)
chr2 (492-660)||(23615082-23615251)
chr2 (474-678)||(24896612-24896817)
chr2 (476-664)||(37130394-37130583)
chr2 (524-663)||(23190254-23190394)
chr2 (524-663)||(23203870-23204010)
chr2 (524-663)||(23611509-23611649)
chr2 (476-664)||(28567675-28567862)
chr2 (543-663)||(22633818-22633939)
chr2 (452-664)||(23814916-23815137)
chr2 (520-658)||(20524136-20524274)
chr2 (509-658)||(21904960-21905109)
chr2 (457-658)||(10480336-10480538)
chr2 (233-330)||(24896961-24897059)
chr2 (164-248)||(10375529-10375613)
chr2 (8-75)||(10376487-10376554)
chr2 (82-181)||(10375627-10375726)
chr2 (225-330)||(22635482-22635588)
chr2 (509-645)||(25349263-25349399)
chr2 (452-623)||(23803285-23803465)
chr2 (452-589)||(23829764-23829908)
chr2 (255-330)||(23614824-23614900)
chr2 (255-326)||(24964018-24964090)
chr2 (592-664)||(24967522-24967594)
chr2 (236-326)||(22648909-22649000)
chr2 (509-616)||(23769371-23769478)
chr2 (229-330)||(23203554-23203656)
chr2 (509-658)||(20442213-20442361)
chr2 (535-664)||(23870534-23870663)
chr2 (471-658)||(30051852-30052039)
chr2 (471-658)||(30142896-30143083)
chr2 (471-658)||(30089867-30090054)
chr2 (471-658)||(30126472-30126659)
chr2 (535-657)||(22708169-22708291)
chr2 (229-312)||(20442546-20442629)
chr2 (255-333)||(23803107-23803185)
chr2 (255-333)||(23814728-23814806)
chr2 (281-330)||(23189991-23190040)
chr2 (281-330)||(23611246-23611295)
chr2 (525-658)||(23995665-23995797)
chr2 (239-326)||(28567440-28567526)
chr2 (265-326)||(22594004-22594065)
chr2 (255-314)||(23769132-23769191)
chr2 (288-333)||(23829609-23829654)
chr2 (255-326)||(10479932-10480004)
chr2 (255-326)||(25349019-25349090)
chr2 (471-571)||(30244066-30244167)
[»] chr8 (38 HSPs)
chr8 (241-850)||(41438566-41439175)
chr8 (299-872)||(29707946-29708521)
chr8 (240-664)||(18735364-18735784)
chr8 (420-768)||(22064476-22064825)
chr8 (241-664)||(25388701-25389126)
chr8 (240-664)||(12820940-12821366)
chr8 (524-664)||(17426099-17426240)
chr8 (452-664)||(22698023-22698242)
chr8 (476-664)||(15337305-15337493)
chr8 (476-664)||(15426370-15426558)
chr8 (476-664)||(15517674-15517862)
chr8 (529-664)||(16667962-16668098)
chr8 (474-664)||(22351966-22352157)
chr8 (524-664)||(20193157-20193298)
chr8 (229-330)||(22064900-22065001)
chr8 (465-658)||(15911712-15911905)
chr8 (229-333)||(22697823-22697927)
chr8 (466-658)||(27818187-27818381)
chr8 (232-330)||(22351716-22351815)
chr8 (233-330)||(17425786-17425884)
chr8 (229-329)||(15911987-15912087)
chr8 (255-330)||(20192866-20192942)
chr8 (470-658)||(22698679-22698866)
chr8 (255-326)||(15337641-15337712)
chr8 (255-326)||(15426706-15426777)
chr8 (255-326)||(15518010-15518081)
chr8 (591-658)||(16777947-16778014)
chr8 (259-316)||(16778256-16778313)
chr8 (509-658)||(24974281-24974432)
chr8 (509-571)||(17637857-17637919)
chr8 (511-621)||(18846786-18846895)
chr8 (289-326)||(16667699-16667736)
chr8 (491-570)||(16778017-16778096)
chr8 (259-313)||(17839785-17839840)
chr8 (703-750)||(22352164-22352211)
chr8 (283-313)||(24974100-24974130)
chr8 (258-329)||(13764313-13764385)
chr8 (255-312)||(18847047-18847104)
[»] scaffold0003 (2 HSPs)
scaffold0003 (229-659)||(33044-33475)
scaffold0003 (684-918)||(37085-37319)
[»] chr3 (43 HSPs)
chr3 (240-918)||(12844288-12844967)
chr3 (229-678)||(13023853-13024303)
chr3 (241-675)||(12021191-12021628)
chr3 (251-562)||(22445017-22445327)
chr3 (356-678)||(12491896-12492219)
chr3 (447-638)||(132376-132567)
chr3 (452-664)||(43135505-43135725)
chr3 (524-664)||(7341461-7341602)
chr3 (524-664)||(7396207-7396348)
chr3 (524-664)||(13299464-13299605)
chr3 (524-664)||(13310122-13310263)
chr3 (524-664)||(14683148-14683289)
chr3 (474-664)||(10139754-10139945)
chr3 (474-664)||(10171121-10171312)
chr3 (524-664)||(10792493-10792634)
chr3 (524-664)||(11887252-11887393)
chr3 (529-664)||(10778975-10779111)
chr3 (225-330)||(10140099-10140205)
chr3 (229-330)||(13299144-13299246)
chr3 (229-330)||(13309802-13309904)
chr3 (241-317)||(15016929-15017005)
chr3 (241-326)||(7341159-7341245)
chr3 (241-326)||(7395905-7395991)
chr3 (241-330)||(10171466-10171556)
chr3 (229-326)||(10779336-10779434)
chr3 (241-326)||(14682842-14682928)
chr3 (255-326)||(10792854-10792926)
chr3 (255-326)||(11887652-11887724)
chr3 (509-658)||(1934634-1934775)
chr3 (255-326)||(14148020-14148090)
chr3 (255-313)||(132202-132260)
chr3 (472-658)||(14133303-14133486)
chr3 (509-658)||(13101825-13101973)
chr3 (700-768)||(12021637-12021705)
chr3 (582-645)||(22444950-22445013)
chr3 (259-326)||(43135320-43135387)
chr3 (255-313)||(1934429-1934487)
chr3 (255-311)||(13905676-13905734)
chr3 (281-326)||(11887490-11887535)
chr3 (257-313)||(14133934-14133990)
chr3 (513-571)||(14000798-14000856)
chr3 (471-549)||(14345523-14345601)
chr3 (255-312)||(14345320-14345377)
[»] scaffold0216 (1 HSPs)
scaffold0216 (241-792)||(19686-20240)
[»] chr4 (27 HSPs)
chr4 (241-769)||(14022147-14022679)
chr4 (241-665)||(3077667-3078087)
chr4 (478-659)||(1658583-1658764)
chr4 (524-664)||(18108683-18108824)
chr4 (492-659)||(13277189-13277357)
chr4 (229-330)||(14775522-14775624)
chr4 (492-659)||(13292567-13292735)
chr4 (476-659)||(10267220-10267402)
chr4 (474-655)||(14714096-14714278)
chr4 (474-655)||(14775776-14775958)
chr4 (476-664)||(18566961-18567147)
chr4 (241-330)||(14713854-14713944)
chr4 (524-664)||(14556930-14557071)
chr4 (524-664)||(15153618-15153759)
chr4 (462-637)||(31079701-31079877)
chr4 (232-330)||(13292298-13292397)
chr4 (229-330)||(15153312-15153414)
chr4 (466-657)||(49526408-49526601)
chr4 (255-330)||(13276973-13277049)
chr4 (229-324)||(18109046-18109142)
chr4 (229-333)||(18566716-18566820)
chr4 (509-658)||(50687535-50687684)
chr4 (232-315)||(31079479-31079562)
chr4 (466-571)||(27812260-27812364)
chr4 (584-658)||(27812391-27812465)
chr4 (170-247)||(24779117-24779194)
chr4 (255-314)||(50687867-50687926)
[»] scaffold0023 (10 HSPs)
scaffold0023 (229-604)||(116456-116830)
scaffold0023 (232-678)||(6367-6813)
scaffold0023 (404-678)||(22594-22869)
scaffold0023 (475-664)||(62134-62324)
scaffold0023 (475-664)||(71312-71502)
scaffold0023 (475-664)||(84995-85185)
scaffold0023 (229-326)||(62480-62578)
scaffold0023 (229-326)||(71658-71756)
scaffold0023 (241-340)||(39026-39126)
scaffold0023 (259-330)||(85337-85409)
[»] scaffold0239 (3 HSPs)
scaffold0239 (241-749)||(16710-17221)
scaffold0239 (259-326)||(261-327)
scaffold0239 (584-657)||(5542-5615)
[»] chr7 (37 HSPs)
chr7 (229-768)||(11989103-11989643)
chr7 (252-664)||(18752644-18753049)
chr7 (229-664)||(15758552-15758992)
chr7 (463-664)||(40342794-40342995)
chr7 (455-664)||(10827729-10827940)
chr7 (455-664)||(11021521-11021732)
chr7 (524-664)||(44277669-44277810)
chr7 (532-664)||(14035878-14036011)
chr7 (524-664)||(14323707-14323848)
chr7 (532-664)||(14345908-14346041)
chr7 (524-664)||(18141794-18141934)
chr7 (524-663)||(18174864-18175004)
chr7 (238-330)||(1977946-1978039)
chr7 (474-678)||(1978171-1978376)
chr7 (524-664)||(18115226-18115366)
chr7 (229-330)||(18174564-18174666)
chr7 (524-623)||(18160094-18160194)
chr7 (455-582)||(10864187-10864314)
chr7 (233-326)||(14035555-14035649)
chr7 (233-326)||(14345585-14345679)
chr7 (229-326)||(18141475-18141573)
chr7 (255-330)||(18159804-18159880)
chr7 (553-664)||(24876397-24876509)
chr7 (471-658)||(41239173-41239358)
chr7 (241-326)||(10864434-10864519)
chr7 (255-326)||(14323414-14323486)
chr7 (241-326)||(10827523-10827608)
chr7 (241-326)||(11021315-11021400)
chr7 (255-326)||(18114933-18115005)
chr7 (229-311)||(16712994-16713076)
chr7 (229-311)||(17687230-17687312)
chr7 (255-330)||(44277378-44277454)
chr7 (240-326)||(40342581-40342667)
chr7 (509-658)||(18450780-18450928)
chr7 (471-648)||(16713223-16713397)
chr7 (471-648)||(17687459-17687633)
chr7 (255-312)||(18451111-18451168)
[»] scaffold0016 (3 HSPs)
scaffold0016 (241-664)||(200111-200531)
scaffold0016 (255-330)||(120624-120700)
scaffold0016 (288-330)||(127496-127538)
[»] scaffold0053 (1 HSPs)
scaffold0053 (232-749)||(44956-45461)
[»] scaffold0013 (5 HSPs)
scaffold0013 (232-557)||(144702-145026)
scaffold0013 (232-557)||(129871-130195)
scaffold0013 (230-557)||(135989-136314)
scaffold0013 (416-918)||(107153-107655)
scaffold0013 (457-659)||(129156-129358)
[»] scaffold0509 (2 HSPs)
scaffold0509 (229-678)||(927-1376)
scaffold0509 (415-678)||(7540-7804)
[»] chr6 (28 HSPs)
chr6 (241-678)||(19405502-19405940)
chr6 (229-664)||(1557383-1557823)
chr6 (452-632)||(26460517-26460697)
chr6 (255-648)||(16596990-16597373)
chr6 (474-678)||(30755478-30755683)
chr6 (240-664)||(11794094-11794518)
chr6 (492-659)||(23496546-23496714)
chr6 (492-659)||(23490948-23491116)
chr6 (474-664)||(16209786-16209977)
chr6 (524-659)||(23431908-23432044)
chr6 (229-330)||(16210129-16210231)
chr6 (462-623)||(19272253-19272413)
chr6 (495-659)||(19025360-19025525)
chr6 (495-659)||(19038403-19038568)
chr6 (480-664)||(18258064-18258248)
chr6 (219-330)||(19038117-19038229)
chr6 (241-330)||(30755243-30755333)
chr6 (232-326)||(19272035-19272129)
chr6 (524-618)||(16310102-16310197)
chr6 (225-330)||(23432258-23432368)
chr6 (255-326)||(16309809-16309881)
chr6 (255-330)||(19025110-19025186)
chr6 (255-330)||(23491298-23491374)
chr6 (255-330)||(23496896-23496972)
chr6 (240-326)||(26460326-26460412)
chr6 (232-325)||(19084918-19085011)
chr6 (466-540)||(19084715-19084789)
chr6 (584-658)||(20440731-20440805)
[»] scaffold0046 (1 HSPs)
scaffold0046 (229-678)||(30565-31014)
[»] scaffold0060 (1 HSPs)
scaffold0060 (241-678)||(32051-32489)
[»] scaffold0059 (2 HSPs)
scaffold0059 (415-918)||(68001-68504)
scaffold0059 (415-918)||(76106-76610)
[»] scaffold0019 (3 HSPs)
scaffold0019 (241-678)||(151121-151557)
scaffold0019 (229-605)||(161453-161829)
scaffold0019 (597-678)||(162035-162116)
[»] scaffold0100 (1 HSPs)
scaffold0100 (242-664)||(8974-9389)
[»] scaffold0063 (1 HSPs)
scaffold0063 (229-664)||(70628-71057)
[»] scaffold0168 (1 HSPs)
scaffold0168 (229-664)||(1125-1547)
[»] scaffold0014 (1 HSPs)
scaffold0014 (241-622)||(7461-7834)
[»] scaffold0077 (2 HSPs)
scaffold0077 (452-657)||(12321-12526)
scaffold0077 (231-326)||(12638-12733)
[»] chr5 (27 HSPs)
chr5 (241-664)||(18156137-18156550)
chr5 (465-664)||(20024395-20024593)
chr5 (474-664)||(20506268-20506459)
chr5 (477-659)||(40932877-40933059)
chr5 (455-623)||(16832143-16832311)
chr5 (474-657)||(21982562-21982746)
chr5 (474-664)||(21530297-21530488)
chr5 (474-664)||(26274046-26274237)
chr5 (229-330)||(21508129-21508231)
chr5 (229-330)||(26273793-26273895)
chr5 (452-653)||(10624309-10624518)
chr5 (239-330)||(20506042-20506134)
chr5 (537-664)||(21504630-21504758)
chr5 (255-330)||(21530639-21530715)
chr5 (255-330)||(21982335-21982411)
chr5 (471-656)||(19212377-19212561)
chr5 (252-326)||(18024606-18024680)
chr5 (229-316)||(20248965-20249052)
chr5 (241-333)||(10624632-10624724)
chr5 (509-658)||(19859566-19859714)
chr5 (255-302)||(21520101-21520149)
chr5 (474-576)||(21507876-21507978)
chr5 (241-326)||(16832420-16832505)
chr5 (268-313)||(26836013-26836058)
chr5 (703-750)||(21982760-21982807)
chr5 (283-313)||(17432463-17432493)
chr5 (509-658)||(17432642-17432793)
[»] scaffold0480 (1 HSPs)
scaffold0480 (232-664)||(3685-4109)
[»] scaffold0282 (2 HSPs)
scaffold0282 (474-678)||(8710-8915)
scaffold0282 (278-327)||(8506-8555)
[»] scaffold0151 (1 HSPs)
scaffold0151 (232-659)||(13853-14281)
[»] scaffold0358 (2 HSPs)
scaffold0358 (474-657)||(15711-15895)
scaffold0358 (229-330)||(16024-16126)
[»] scaffold0001 (10 HSPs)
scaffold0001 (474-657)||(390078-390262)
scaffold0001 (474-664)||(25040-25231)
scaffold0001 (474-664)||(28538-28729)
scaffold0001 (474-664)||(115297-115488)
scaffold0001 (474-664)||(129849-130039)
scaffold0001 (229-330)||(129595-129697)
scaffold0001 (252-330)||(390391-390470)
scaffold0001 (255-327)||(24813-24886)
scaffold0001 (255-327)||(28311-28384)
scaffold0001 (255-330)||(115069-115145)
[»] scaffold0362 (2 HSPs)
scaffold0362 (458-659)||(11293-11495)
scaffold0362 (229-330)||(11607-11709)
[»] scaffold0323 (2 HSPs)
scaffold0323 (524-664)||(4505-4646)
scaffold0323 (255-330)||(4849-4925)
[»] scaffold0101 (3 HSPs)
scaffold0101 (524-664)||(50907-51048)
scaffold0101 (524-664)||(46269-46410)
scaffold0101 (255-330)||(45978-46054)
[»] scaffold0740 (2 HSPs)
scaffold0740 (524-664)||(5621-5762)
scaffold0740 (233-330)||(5977-6075)
[»] scaffold0130 (6 HSPs)
scaffold0130 (524-663)||(39849-39989)
scaffold0130 (524-664)||(28530-28671)
scaffold0130 (474-664)||(29292-29483)
scaffold0130 (241-330)||(29055-29145)
scaffold0130 (229-330)||(40204-40306)
scaffold0130 (241-330)||(28223-28313)
[»] scaffold0005 (2 HSPs)
scaffold0005 (229-330)||(64106-64208)
scaffold0005 (474-655)||(63772-63954)
[»] scaffold0190 (2 HSPs)
scaffold0190 (476-664)||(7411-7600)
scaffold0190 (268-326)||(7748-7806)
[»] scaffold0040 (2 HSPs)
scaffold0040 (524-664)||(41324-41465)
scaffold0040 (255-330)||(41671-41747)
[»] scaffold0026 (4 HSPs)
scaffold0026 (492-664)||(142186-142359)
scaffold0026 (474-664)||(118318-118509)
scaffold0026 (232-330)||(141924-142023)
scaffold0026 (241-330)||(118082-118172)
[»] scaffold0029 (2 HSPs)
scaffold0029 (513-664)||(101996-102146)
scaffold0029 (229-370)||(101751-101891)
[»] scaffold0022 (3 HSPs)
scaffold0022 (532-659)||(58495-58623)
scaffold0022 (229-330)||(14560-14662)
scaffold0022 (255-330)||(58833-58909)
[»] scaffold0012 (2 HSPs)
scaffold0012 (463-659)||(250023-250219)
scaffold0012 (255-329)||(249825-249899)
[»] scaffold0081 (2 HSPs)
scaffold0081 (495-659)||(44233-44398)
scaffold0081 (255-326)||(43985-44057)
[»] scaffold0108 (4 HSPs)
scaffold0108 (532-659)||(23021-23149)
scaffold0108 (532-663)||(44193-44325)
scaffold0108 (229-330)||(23361-23463)
scaffold0108 (255-330)||(44537-44613)
[»] scaffold0770 (2 HSPs)
scaffold0770 (513-664)||(3692-3842)
scaffold0770 (229-370)||(3447-3587)
[»] scaffold0241 (2 HSPs)
scaffold0241 (474-664)||(25070-25261)
scaffold0241 (255-330)||(25412-25488)
[»] scaffold0021 (4 HSPs)
scaffold0021 (474-664)||(18450-18641)
scaffold0021 (474-664)||(27981-28172)
scaffold0021 (232-330)||(18199-18298)
scaffold0021 (232-330)||(27730-27829)
[»] scaffold0270 (4 HSPs)
scaffold0270 (532-664)||(8088-8221)
scaffold0270 (532-664)||(15218-15351)
scaffold0270 (255-330)||(7817-7893)
scaffold0270 (255-330)||(14947-15023)
[»] scaffold0064 (2 HSPs)
scaffold0064 (532-663)||(43128-43260)
scaffold0064 (267-330)||(42852-42916)
[»] scaffold0304 (2 HSPs)
scaffold0304 (532-664)||(5789-5922)
scaffold0304 (255-330)||(5502-5578)
[»] scaffold0297 (2 HSPs)
scaffold0297 (465-658)||(8724-8917)
scaffold0297 (255-314)||(2429-2488)
[»] scaffold0423 (2 HSPs)
scaffold0423 (552-678)||(1707-1834)
scaffold0423 (252-330)||(2030-2109)
[»] scaffold0193 (2 HSPs)
scaffold0193 (474-664)||(26728-26919)
scaffold0193 (255-330)||(26501-26577)
[»] scaffold0096 (1 HSPs)
scaffold0096 (229-623)||(36355-36753)
[»] scaffold0253 (2 HSPs)
scaffold0253 (524-664)||(15324-15465)
scaffold0253 (255-326)||(15050-15122)
[»] scaffold0080 (2 HSPs)
scaffold0080 (475-659)||(2426-2611)
scaffold0080 (229-330)||(2765-2867)
[»] scaffold0417 (2 HSPs)
scaffold0417 (513-632)||(1321-1440)
scaffold0417 (255-333)||(1601-1679)
[»] scaffold0319 (1 HSPs)
scaffold0319 (255-330)||(11858-11934)
[»] scaffold0107 (3 HSPs)
scaffold0107 (239-330)||(32446-32538)
scaffold0107 (573-664)||(29112-29203)
scaffold0107 (474-571)||(32202-32299)
[»] scaffold0516 (2 HSPs)
scaffold0516 (255-330)||(10983-11059)
scaffold0516 (524-571)||(11274-11321)
[»] scaffold1496 (1 HSPs)
scaffold1496 (509-658)||(1396-1544)
[»] scaffold0058 (1 HSPs)
scaffold0058 (507-637)||(15013-15142)
[»] scaffold0035 (2 HSPs)
scaffold0035 (509-658)||(25740-25888)
scaffold0035 (255-326)||(25498-25568)
[»] scaffold0504 (2 HSPs)
scaffold0504 (584-658)||(685-759)
scaffold0504 (220-326)||(334-440)
[»] scaffold0171 (1 HSPs)
scaffold0171 (509-647)||(26915-27052)
[»] scaffold0126 (2 HSPs)
scaffold0126 (509-659)||(31211-31360)
scaffold0126 (255-326)||(28808-28878)
[»] scaffold0093 (1 HSPs)
scaffold0093 (269-326)||(43431-43487)


Alignment Details
Target: chr1 (Bit Score: 417; Significance: 0; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 240 - 918
Target Start/End: Complemental strand, 21138071 - 21137392
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  21138071 ttgtttacactaaaatttggtaaacaatcactggtttcaagatgtttacttgcaagatcaaccagtaaatcttaagagcatattttgctttatttatctt 21137972  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgat 439  Q
    |  | |  |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  21137971 tttagaaatgtgatatttgttcttgaagaactttgataaaagcaagaataaataaaagg-caatcgaatccaacccagttgaatccaatcgaagtatgat 21137873  T
Q  440 gcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtaca 539  Q
    || |||||||| | || ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21137872 gcaaatgaaagtagataaattactcaaaataaacaagtaaattgcaaaggcatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtaca 21137773  T
Q  540 catattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaa 639  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| | |  ||||||||||    
T  21137772 catattcatacattgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgaacagtttttcctaa 21137673  T
Q  640 gaaaaactattatttatacagatagggtaataactaccttgtt---gaaaactataactacagaaaaactacctaatcctagccatacgatctaaatatc 736  Q
    ||||||||| |||||||||| |||||| ||||| ||||| |||    |||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  21137672 gaaaaactactatttatacaaataggg-aataaatacctagtttgaaaaaactataactgcagaaaaactacctaatcctagccatacgatttgaatatc 21137574  T
Q  737 gaatatagccgttggaacacttgaccttatccggataaaataactgctttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctcttct 835  Q
    |||||||||| || ||||||||||||||||||| | ||| ||||||| ||||| || |||  | |||||||| ||||||||| || ||||||||||| |     
T  21137573 gaatatagccatttgaacacttgaccttatccgta-aaagtaactgccttcgaaatcccctcggtcatcgaacagaggcgcgcgtcttcgattctctacc 21137475  T
Q  836 aaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcattaaatgatacccttt 918  Q
    |||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||    
T  21137474 aaggagcgcaacttcgatagaaatgcaagatcaagtctttttcataaggtcaactcttttgaccacattaaatgatacccttt 21137392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 240 - 918
Target Start/End: Complemental strand, 23512028 - 23511347
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |||||| |||||||     
T  23512028 ttgtttacactaaaatttggtcaacaatcgctggtttcaaaatatttacttgcaagatcaaccggtaaattttaagagcatattatgctttatttatctc 23511929  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaattgaagtatga 438  Q
    |  | | | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  23511928 tttagaatcgtgatgtttgttcttgaagaactttgataaaagcaagaataaaataaaaaggcaatcgaatccaacctagttgaatccaattgaagtatga 23511829  T
Q  439 tgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtac 538  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  23511828 tgcgaatgaaagtaaatgaattactcaaaataaacaagtaaattgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtac 23511729  T
Q  539 acatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta 638  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||  |||||||||    
T  23511728 acatattcatacattgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttccta 23511629  T
Q  639 agaaaaactattatttata-cagatagggtaataactacct--tgttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaatat 735  Q
    |||||||||| |||||||| || |||| | |||||||||||  | || |||||||||||| |||||||||||||||||| ||||||| |||| | |||||    
T  23511628 agaaaaactactatttataccaaatagag-aataactacctagttttaaaaactataactgcagaaaaactacctaatcttagccatccgatttgaatat 23511530  T
Q  736 cgaatatagccgttggaacacttgaccttatccggataaaataactgctttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctcttc 834  Q
    ||||||||| |||| |||||||||||| |||||||| |||||||| ||||| ||||| ||   || ||||||| ||||||||| || |||||||||||||    
T  23511529 cgaatatagtcgtttgaacacttgaccgtatccgga-aaaataaccgctttagagatcccttcgcccatcgaacagaggcgcgcgtcttcgattctcttc 23511431  T
Q  835 taaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcattaaatgatacccttt 918  Q
     |||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||||  ||||||||||||||||||    
T  23511430 caaggagcgcaacttcgatagaaatgcaaggtcaagtctttcccgcaaggccaactcttttgaccacattaaatgatacccttt 23511347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 241 - 768
Target Start/End: Complemental strand, 21076977 - 21076445
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt-tatct 338  Q
    |||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  21076977 tgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgttatctct 21076878  T
Q  339 ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatccaattgaagtat 436  Q
    || |||  |   || | ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||  ||||||||||||| |||||||    
T  21076877 tttaaactt---gacgcttgttcttgaagaactttgataaaagcaagaataaaaataaaaaggcaatcgaatccaacctagttgaatccaatcgaagtat 21076781  T
Q  437 gatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggt 536  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21076780 gatgcgaatgaaagtaaatgaattactcaaaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggt 21076681  T
Q  537 acacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcc 636  Q
    ||||||||||||| |||||||||| ||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||    
T  21076680 acacatattcatacattgcaacttatgactcgtcagtcgcttccatacggataatttgagtgtaagtttttagtatgattgaattgtgaccattttttcc 21076581  T
Q  637 taagaaaaactattatttatacagatagggtaataactacct-tgttgaaaactataactacag---aaaaactacctaatcctagccatacgatctaaa 732  Q
    |||||||||||| |||||||||| | ||||||||||||||||   || |||||||||||| | |   |||||||||||||||  |||||| |||| ||||    
T  21076580 taagaaaaactactatttatacaaacagggtaataactacctaattttaaaactataactgcggataaaaaactacctaatcacagccattcgatttaaa 21076481  T
Q  733 tatcgaatatagccgttggaacacttgaccttatcc 768  Q
     ||||||||||||||||  |||||||||||||||||    
T  21076480 catcgaatatagccgttaaaacacttgaccttatcc 21076445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 241 - 664
Target Start/End: Complemental strand, 50826792 - 50826372
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||     
T  50826792 tgtttacactgaaatttggtaaacaatcgctgatttcaaaatatttacttgcaagatcaaccaataaatcttaagagcacattgtgctttgtttatcttc 50826693  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatg 440  Q
    | ||| ||||||||||||||||||||||| ||||||| ||  || ||||||||||||| ||||||||| |||| |||||||||||||| || ||||||||    
T  50826692 cgaaaattgtgatgtttgttcttgaagaa-tttgatacaaataaaaataaataaaagg-caatcgaattcaacccagttgaatccaatcgaggtatgatg 50826595  T
Q  441 cgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacac 540  Q
    | |||  ||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| || |||    
T  50826594 caaatagaagtaaatgaattacttaaaagaaacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttagtgcac 50826495  T
Q  541 atattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaag 640  Q
    | ||||||| |||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  50826494 agattcatagattgcaacctgtgactcgtttctcgcttccaaacggataatttgagtgtaagttttt-gtatgattgaattgtaacccttttttcctaag 50826396  T
Q  641 aaaaactattatttatacagatag 664  Q
    ||||| ||||||||||||| ||||    
T  50826395 aaaaattattatttatacaaatag 50826372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 240 - 678
Target Start/End: Complemental strand, 21311147 - 21310708
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatc- 337  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  21311147 ttgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttcattatcc 21311048  T
Q  338 -tttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtat 436  Q
     ||| | | ||   ||   |||||||| |||| |||||||| || |||||||||| | || |   |||||||||||| |||||||||||||| ||||| |    
T  21311047 cttttagacgt---gacacttgttcttaaagatctttgatagaaacaagaataaaaataaagaggatcgaatccaacccagttgaatccaatcgaagttt 21310951  T
Q  437 gatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggt 536  Q
    | ||| ||| | || |||  ||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||||| || |||||  ||||||||    
T  21310950 ggtgcaaataacagtaaagaaattacttaaaatgaataagtaaattgcaaagacatttaaagaaatgtattgaaattgcatggactgaataaaagttggt 21310851  T
Q  537 acacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttc 635  Q
     ||||| |||||| |||||||||| |||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||    
T  21310850 gcacatgttcatacattgcaacttctgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttc 21310751  T
Q  636 ctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    ||||||||||||| |||||||||| | |||| |||||||||||    
T  21310750 ctaagaaaaactactatttatacaaacaggggaataactacct 21310708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 235 - 678
Target Start/End: Complemental strand, 29305643 - 29305197
Alignment:
Q  235 ccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt 333  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||  |    
T  29305643 ccaatttgtttatattgaaatttggtaaataatcgctggtttcaaaaatgttcacttgcaagatcaaccagtaaattttaagagcatattgtgcttttat 29305544  T
Q  334 tatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaag--caagaataaataaaagggcaatcgaatccaactcagttgaatccaattga 431  Q
    |||||||   | |  || ||  |||||||| ||||||||||||||||   |||||| ||| | ||||  ||||||||||||| |||||||||||||| ||    
T  29305543 tatctttttca-gacgtaatacttgttcttaaagaactttgataaaaaaacaagaacaaa-ataaggataatcgaatccaacccagttgaatccaatcga 29305446  T
Q  432 agtatgatgcgaatgaaagcaaatgaattactcaaaa-taaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaa 530  Q
    ||| || ||||||||| || |||  || |||| |||| | |  |||||||||| |||||  |||||||||||||||||||||| ||| || | |||| ||    
T  29305445 agtttggtgcgaatgacagtaaagaaaatacttaaaaatgattaagtaaattgcaaagatgtttaaagaaatgtattgaaattacatagacttaatgaaa 29305346  T
Q  531 gttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctc 629  Q
     ||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||      
T  29305345 attggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccg 29305246  T
Q  630 tttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  29305245 tttttcctaagaaaaactactatttatacaaataggataataactacct 29305197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 229 - 664
Target Start/End: Original strand, 21168055 - 21168485
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |    
T  21168055 ggcgtgccaatttttttacactgaaatttggtaaacaatcgctggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtg-t 21168153  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaat 428  Q
    ||  |||||||  | || ||  ||| |||||||||||||||||| |||||||  ||  ||||  ||||  |||||||||| |||| ||||||||||||||    
T  21168154 ttaattatcttctagaaatttggatatttgttcttgaagaactt-gataaaacgaa--ataagaaaaaaagcaatcgaattcaacccagttgaatccaat 21168250  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
     ||||   | |   ||| ||||  |||||||| ||||||| |||||||||||||| |||||||| |||  ||||| | | ||||||||||||||||||||    
T  21168251 cgaagaccggtataaataaaagtgaatgaattgctcaaaagaaacaagtaaattgcaaagacatgtaagaaaatgaacttaaattgcattgattgaatgt 21168350  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacct 628  Q
    |  ||| |||||||||||||| ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| |||     
T  21168351 agattgctacacatattcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgattgaattgtgacc- 21168448  T
Q  629 ctttttc-ctaagaaaaactattatttatacagatag 664  Q
    |||||||  |||||||||||| |||||||||| ||||    
T  21168449 ctttttcgttaagaaaaactactatttatacaaatag 21168485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 241 - 664
Target Start/End: Original strand, 31845376 - 31845801
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgt-ttatct 338  Q
    |||||||| | |||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31845376 tgtttacactgaaatttggtacacaatcgctgatttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgctttttattatct 31845475  T
Q  339 --ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaattgaagta 435  Q
      |||| | ||    ||  |||||||| |||||||||||||||| |||||| ||| || ||   |||||||||||||| |||||||||||||| |||||     
T  31845476 gtttcagacgta---atacttgttcttaaagaactttgataaaaacaagaacaaaatacaaa--caatcgaatccaacccagttgaatccaatcgaagtt 31845570  T
Q  436 tgatgcgaatgaaagcaaatgaattactcaaaa-taaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttg 534  Q
    |  ||  ||| | || |||  || |||| |||| |    |||||||||| |||||  |||||||||||||||||||||||||  |||| |||| || |||    
T  31845571 tagtgtaaataacagtaaagaaaatacttaaaaatgcttaagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagatttaatgaaaattg 31845670  T
Q  535 gtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttt 633  Q
    || ||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||||| |||  ||||    
T  31845671 gtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttt 31845770  T
Q  634 tcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||||| |||||||||| ||||    
T  31845771 tcctaagaaaaactactatttatacaaatag 31845801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 282 - 659
Target Start/End: Original strand, 22684399 - 22684776
Alignment:
Q  282 tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatc-tttcaaaagttgtgatgtttgttcttgaagaactttgataaaa 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |||| | |  |   |   |||||||| |||| |||||||| ||    
T  22684399 tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgtttttattatcctttctaga--tagaacacttgttcttaaagatctttgatagaa 22684496  T
Q  381 gcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaa 480  Q
     ||||||| || | || || ||||||||||||| |||||||||||||| ||||| || |   ||  |  | |||   |||||| ||||||||   |||||    
T  22684497 acaagaatgaaaataaagggaatcgaatccaacccagttgaatccaatcgaagtttggtttaaacaacggtaaagagattacttaaaataaatgggtaaa 22684596  T
Q  481 ttgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttcc 580  Q
    ||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||||  |||||||||||||||| ||| ||||||||    
T  22684597 ttgcaaagatatttaaagaaatgtattaaaattgcattgattgaatgaaagttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttcc 22684696  T
Q  581 atacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    ||||||| | | ||||| |||||||||||||||||||||||||| |||   |||||||||  ||||||| ||||||||||    
T  22684697 atacggacagtattgagcgtaagtttttagtatgattgaattgtgaccctgttttcctaaagaaaactactatttataca 22684776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 452 - 664
Target Start/End: Original strand, 4361567 - 4361784
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatg----tattgaaattgcattgattgaatgtaagttggtacacatattca 547  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||  |||||    || | |||||||||||||||||||||| ||||||||||| ||||    
T  4361567 aaatgaattgctcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaattaaattgcattgattgaatgtaaattggtacacatgttca 4361666  T
Q  548 tatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta-agaaaaac 646  Q
    ||||||||||||||| |||||||| || ||||||| |||||| ||||||| ||||||||| ||||||||||||||| |||| ||||  |||  |||||||    
T  4361667 tatattgcaacttgttactcgtttctctcttccatgcggataatttgagtataagttttttgtatgattgaattgtgaccttttttcgctagggaaaaac 4361766  T
Q  647 tattatttatacagatag 664  Q
    || |||||||||| ||||    
T  4361767 tactatttatacaaatag 4361784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 452 - 648
Target Start/End: Original strand, 2603413 - 2603610
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatata 551  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||||| | | |||||||||||||||||||||| |||||| |||| |||||| |    
T  2603413 aaatgaattactcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtatacatgttcataca 2603512  T
Q  552 ttgcaacttgtga-ctcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta-agaaaaacta 648  Q
    ||||||||||||| ||||||| || ||||||| |||||| ||||||| ||||||||| ||||||||||||||| |||  |||| |||| ||||||||||    
T  2603513 ttgcaacttgtgatctcgtttctctcttccatgcggataatttgagtttaagttttt-gtatgattgaattgtaaccctttttccctacagaaaaacta 2603610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 476 - 664
Target Start/End: Original strand, 4229812 - 4230000
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||||||||||| ||||||||||| | |  |||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  4229812 gtaaattgtaaagacacttaaagaaatgaacttgaattgtgttgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatct 4229911  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| |||||| |||||| ||||||| || ||||||| ||||||| |||  ||| ||||| | ||||||| |||||||||| ||||    
T  4229912 cttccatgcggatagtttgagcgtaagttatttgtatgatagaattgtgacccttttctcctagggaaaactactatttatacaaatag 4230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 229 - 633
Target Start/End: Original strand, 21381759 - 21382155
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    ||||||||||||||||||||   ||||| | ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||  |||||||||      
T  21381759 ggcgtgccaatttgtttacaccgaaattagttaaacaatcgctggtttaaaaatgtttacttgcaagatcaatcggtaaatcttaaggacatattgtgtc 21381858  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaat 428  Q
    |   |||||||    || || | || || ||||||| ||||||| | |||||  |||  |||  |||||  |||||||||  ||| ||||||||||||||    
T  21381859 ta--ttatcttctggaaattttaatatt-gttcttggagaacttgg-taaaacgaag--taagaaaaag--caatcgaatttaacccagttgaatccaat 21381950  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
     ||||  || |   ||| |||| ||||||||| ||||||| ||||||| ||  |||||||||||||||  ||||| | | ||||||||||||| |||| |    
T  21381951 cgaagactggtataaataaaagtaaatgaattgctcaaaagaaacaagaaaggtgtaaagacatttaagaaaatgaacttaaattgcattgatcgaatat 21382050  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacct 628  Q
    |  ||||||||||| |||||| |||| |||||||||||||||| || ||||||| || ||| |||||||||||| |||| |||||||||||| || |||     
T  21382051 agattggtacacatgttcatacattgtaacttgtgactcgtttctctcttccatgcgaataatttgagtgtaagctttttgtatgattgaatcgtgaccc 21382150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 241 - 632
Target Start/End: Complemental strand, 27132111 - 27131731
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | || ||||||||||||||||||  || ||||| || ||||||||||||||| |||||||||||||  ||||||||| |||||| || ||     
T  27132111 tgtttacactgaattttggtaaacaatcgctgagttaaaaatattcacttgcaagatcaactagtaaatcttaaggacatattgtg-tttgtt-attttc 27132014  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagt-atgat 439  Q
    || || ||   ||  |||| |||||||||||| |||||||  |||  |||  ||||   ||||||||| |||||||||||||| |||| ||| | ||| |    
T  27132013 cataaattt--attattgtacttgaagaactt-gataaaaagaag--taatcaaaa---caatcgaattcaactcagttgaattcaatcgaaattatgtt 27131922  T
Q  440 gcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtaca 539  Q
       |||||||  || ||||||  |||||| ||| |||||||||||||||||||||||  ||||| | | ||||||||||||||| |||||| ||||||||    
T  27131921 a--aatgaaaataagtgaatttttcaaaagaaaaaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattgattggatgtaaattggtaca 27131824  T
Q  540 catattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctcttt 632  Q
    ||| |||||| | ||||||||||||||||||| || |||||||  ||||| ||||||||||||||||  ||||||| | ||||| ||| ||||    
T  27131823 catgttcatacagtgcaacttgtgactcgtttctctcttccatgaggataatttgagtgtaagttttgtgtatgataggattgtgaccacttt 27131731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 472 - 664
Target Start/End: Complemental strand, 27902204 - 27902012
Alignment:
Q  472 acaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgttt 571  Q
    |||||||||||| ||||||||||| | ||||| | | |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||    
T  27902204 acaagtaaattgcaaagacatttagaaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactccttt 27902105  T
Q  572 atcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
     || |||||||  ||||| ||||||||||||||||  ||||||||| ||||| |||| |||  | |  ||||||||| |||||||||| ||||    
T  27902104 ctctcttccatgtggataatttgagtgtaagttttgtgtatgattggattgtgacctttttcccttgggaaaaactactatttatacaaatag 27902012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 22086533 - 22086392
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  || ||||||||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||||||||    
T  22086533 aatgaaagttggtacacatattcatacttttcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaagtttttagtatgattgaattg 22086434  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| ||||||||| |||||    
T  22086433 tgacccatttttcctaagaaaaactactatttatacggatag 22086392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 474 - 678
Target Start/End: Original strand, 22809015 - 22809220
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||| |  ||||||||||||| ||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  22809015 aagtaaattgcaaaaatgtttaaagaaatgtcttgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 22809114  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataa 672  Q
     ||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||| | |||||||||| ||||  | ||||    
T  22809115 tgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaaccactatttatacaaatagacttataa 22809214  T
Q  673 ctacct 678  Q
    ||||||    
T  22809215 ctacct 22809220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 22808775 - 22808877
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22808775 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 22808874  T
Q  328 ttt 330  Q
    |||    
T  22808875 ttt 22808877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 41368671 - 41368803
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacgga-tattttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||  || ||||||||||| |||||||||||||||||||| ||| ||    
T  41368671 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacaatattgagtgtaag-ttttagtatgattgaattgtgacc-ct 41368768  T
Q  631 ttttcctaag-aaaaactattatttatacagatag 664  Q
    |||||||||| ||||||||||||||||||||||||    
T  41368769 ttttcctaagaaaaaactattatttatacagatag 41368803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 498 - 664
Target Start/End: Original strand, 1528625 - 1528792
Alignment:
Q  498 gaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgag 596  Q
    ||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| ||| ||||||||||| | | |||||    
T  1528625 gaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgtttccatacggacagtattgag 1528724  T
Q  597 tgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||||||||||||||||| |||  |||||| |||||||||||  |||||||||| ||||    
T  1528725 tgtaagtttttagtatgattgaattgtgacccgtttttcgtaagaaaaacttctatttatacaaatag 1528792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 659
Target Start/End: Complemental strand, 27562078 - 27561896
Alignment:
Q  478 aaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgct 577  Q
    |||||| |||||  || |||||| ||||||||| ||| |  || | |||| || ||||| ||||||||||||  || ||||||||||||||||| |||||    
T  27562078 aaattgcaaagatgttcaaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttacaacttgtgactcgtttgtcgct 27561979  T
Q  578 tccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    |||||||||| | | |||||||||||||||| |||| |||||||||| |||| |||||| |||||||||||  ||||||||||    
T  27561978 tccatacggacagtattgagtgtaagttttttgtattattgaattgtgacctgtttttcttaagaaaaacttctatttataca 27561896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 41383578 - 41383710
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||||||||||||||||  |||| |||||| |||||||| ||||||||||| ||| | | ||||||||||| |||||||||||||||||||| ||| ||    
T  41383578 ttggtacacatattcatactttgcgacttgtaactcgtttgtcgcttccatatggacagtattgagtgtaag-ttttagtatgattgaattgtgacc-ct 41383675  T
Q  631 ttttcctaag-aaaaactattatttatacagatag 664  Q
    |||||||||| ||||||||||||||||||||||||    
T  41383676 ttttcctaagaaaaaactattatttatacagatag 41383710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 21550670 - 21550522
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||  |||||| |||||||| || | |  || |||||| ||||||||||||||||      
T  21550670 aaattgcattgattgaatgtaaattggtacacatattcatacattgtgacttgttactcgtttctctc-tgaatgcggatagtttgagtgtaagttttct 21550572  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||||||||||||| | |  ||||||||| ||||||||| |||||||||    
T  21550571 gtatgattgaattgtgatccgtttttcctatgaaaaactactatttatac 21550522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 22794188 - 22794264
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22794188 tttggtaaacaatcgctggtttaaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 22794264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 41383249 - 41383347
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41383249 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgttaacttgcaagatcaaccagtaaatcttaggagcatattgtg 41383347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 22086824 - 22086748
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22086824 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 22086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 465 - 657
Target Start/End: Original strand, 16406718 - 16406910
Alignment:
Q  465 aaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtga 564  Q
    |||| |||||||||||||| ||||||||||||  ||||  | | |||||||||||||||||||| | ||||||||||| |||||| |||  |||||||||    
T  16406718 aaaagaaacaagtaaattgcaaagacatttaagaaaataaacttaaattgcattgattgaatgtcaattggtacacatgttcatacattataacttgtga 16406817  T
Q  565 ctcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttata 657  Q
    ||||||| || |||  ||  ||||| ||| |||||||||||   ||||||| |  |||| || | |||||| || ||||||||| ||||||||    
T  16406818 ctcgtttctctcttgaatgtggatagtttaagtgtaagtttcgtgtatgatcggtttgtgacatgtttttcttatgaaaaactactatttata 16406910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 27562311 - 27562235
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27562311 tttggtaaacaatcgctggtttcaatgaagtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 27562235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 46888502 - 46888609
Alignment:
Q  141 ccatttcacttacggtttctgttactctgaaaccattttttatgcatacaaaatgttgggtcgcgcaaaacttgaaatggttctacttggcgtgccaatt 240  Q
    ||||||||  |||||||||| || |||||||||||||||||||||||  ||| |||||||||||||||||||||| || || | ||| ||||||||| ||    
T  46888502 ccatttcatgtacggtttctatttctctgaaaccattttttatgcatgtaaagtgttgggtcgcgcaaaacttgatattgtcccactgggcgtgccattt 46888601  T
Q  241 tgtttaca 248  Q
    ||||||||    
T  46888602 tgtttaca 46888609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 16406494 - 16406591
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||| | |  ||||||||||| |||||||||| ||| |  |||||||||||||||||||||||||||||||  |||||||||    
T  16406494 ggcgtgccaatttgtttacactgatttttggtaaacagtcgctggtttaaaattaattacttgcaagatcaaccagtaaatcttaaggtcatattgtg 16406591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 1528374 - 1528450
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||| ||||||||||||||||    
T  1528374 tttggtaaacaatcgctggtttcaataatgtaaacttgcaagatcaacaagtaaatcttaggagcatattgtgcttt 1528450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 4229574 - 4229649
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaag 315  Q
    ||||||||| |||| |||||||||||| ||||||||| || ||  |||||||||||||||||||||||||||||||    
T  4229574 ttgtttacactaaattttggtaaacaaccgctggtttaaacatagttacttgcaagatcaaccagtaaatcttaag 4229649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 474 - 585
Target Start/End: Original strand, 22794415 - 22794526
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||| ||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  22794415 aagtaaattgcaaagatgtttaaagaaatgtcttgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 22794514  T
Q  574 cgcttccatacg 585  Q
    ||||||||||||    
T  22794515 cgcttccatacg 22794526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 41368371 - 41368443
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||| || |||||||  ||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  41368371 tttggtaaacaatcactagtttcaatgatgttaacttgcaagatcaaccagtaaatcttaggagtatattgtg 41368443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 2603228 - 2603299
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||||   ||||||| || || |||||||||||||||||||||||||||||||||  ||||||||    
T  2603228 tttggtaaacaacgactggtttaaacatatttacttgcaagatcaaccagtaaatcttaagaaaatattgtg 2603299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 18530693 - 18530545
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||| |||||||||  |||||||||||   |||||| | || ||| |  | |  || |||||| |||||||||||||||||     
T  18530693 aaattgcattgattgaatgtaaattggtacacggattcatatattttgacttgtaaatcatttttttc-tagatgcggatagtttgagtgtaagtttttt 18530595  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||| ||||||||| || | ||||||| | | ||||||  |||||||||    
T  18530594 gtatggttgaattgtgacttgtttttccaatgtaaaactgctatttatac 18530545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 27902399 - 27902317
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggttt-caaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | ||||||||||||||| |||||||||  ||||| |||||||    |||||||||||||||||||||  |||||||||    
T  27902399 tgtttacactgaaatttggtaaacaaccgctggtttaaaaaatatttactt----gatcaaccagtaaatcttaaggacatattgtg 27902317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 22508752 - 22508812
Alignment:
Q  255 tttggtaaacaatcgctggtttc-aaaatg-tttacttgcaagatcaaccagtaaatctta 313  Q
    |||| |||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  22508752 tttgttaaacaattgctggtttccaaaatggtttacgtgcaagatcaaccagtaaatctta 22508812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 596 - 650
Target Start/End: Original strand, 22509072 - 22509126
Alignment:
Q  596 gtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactatt 650  Q
    |||||||||||  ||||||||||||||| |||| |||||| || |||||||||||    
T  22509072 gtgtaagttttgtgtatgattgaattgtgacctgtttttcgtatgaaaaactatt 22509126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 26050126 - 26050084
Alignment:
Q  141 ccatttcacttacggtttctgttactctgaaaccattttttat 183  Q
    ||||||||  ||||||||||||| |||||||||||||||||||    
T  26050126 ccatttcatatacggtttctgtttctctgaaaccattttttat 26050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 21550912 - 21550855
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctt 312  Q
    |||||||||||| ||||||||| |||    ||||||||||||||||| ||||||||||    
T  21550912 tttggtaaacaaccgctggtttaaaatcagttacttgcaagatcaactagtaaatctt 21550855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 404; Significance: 0; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 240 - 918
Target Start/End: Complemental strand, 31818334 - 31817654
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    ||||||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  31818334 ttgtttacactgaaatttagtaaacaatctctggtttcaaaatatttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttatttatctc 31818235  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaa-gcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaattgaagtatg 437  Q
    |  | |   |||||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||| |||| | |||||||||||| ||||||||    
T  31818234 tttagaaacgtgatgtttgttcttgaagaactttgataaaaagcaagaataaaataaaaagggaatcgaattcaacccggttgaatccaatcgaagtatg 31818135  T
Q  438 atgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggta 537  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  31818134 atgcgaatgaaagtaaatgaattactcaaaataaacaagtaaattgcaaaaacatttaaagaaatgaattgaaattgcattgactgaatgtaagttggta 31818035  T
Q  538 cacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcct 637  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||| |||  |||||| |    
T  31818034 ctcatattcatatattgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaaatttttagtacgattgaattgtgacccgtttttcat 31817935  T
Q  638 aagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaatatc 736  Q
    ||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  31817934 aagaaaaactactatttatacagataggg-aataactacctagtttgaaaactataactgcag-aaaactacctaatcctagtcatacgatctaaatatc 31817837  T
Q  737 gaatatagccgttggaacacttgaccttatccggataaaataactgctttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctcttct 835  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||   | ||||||| ||| ||||| || |||||||||||||     
T  31817836 gaatatagccgttggaacacttgaccttatccgga-aaaataactgctttcgagatcccctctcccatcgaacagaagcgcgcgtcttcgattctcttcc 31817738  T
Q  836 aaggagcgtaacttcgatagaa-atgcaaggtcaagtcttttccacaaggtcaactcttttgacttcattaaatgatacccttt 918  Q
    |||||||| || ||||||| || |||||||||||| ||||||||| ||||||||| ||||||||  ||||||||||||||||||    
T  31817737 aaggagcgcaatttcgataaaagatgcaaggtcaattcttttccataaggtcaacacttttgaccacattaaatgatacccttt 31817654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 241 - 918
Target Start/End: Complemental strand, 22881360 - 22880679
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |    
T  22881360 tgtttacactgaaatttggtaaagattcgctggtttcaaaatgtttacttgcaagatcaactagtaaatcttaagagcatattgtgctttatttatctct 22881261  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatg 440  Q
      | | |||||||||| ||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||| || ||||||||||| |||||||||||    
T  22881260 ttagaattgtgatgttcgttcttgaagaactttgataaaaacaagaataaaataaaaggcaatcgaatccaacccaattgaatccaatcgaagtatgatg 22881161  T
Q  441 cgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacac 540  Q
    ||||| || | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||||||| |||||||||    
T  22881160 cgaataaaggtaaatgaattactcaaaataaacaagtaaattgcaaagacatttaaagaaatgcatttaaatttcattgagtgaatgtaacttggtacac 22881061  T
Q  541 atattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaag 640  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||  || |||||||||||||||||||||| ||   |||||||||||    
T  22881060 atattcatacattgcaacttgtgactcgtttatcgctttcatacggatagtttgagcatatgtttttagtatgattgaattgtgacacttttttcctaag 22880961  T
Q  641 aaaaactattatttatacagatagggtaataactaccttg------ttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaata 734  Q
    |||||||| |||||||||| |||| |  |||||||||| |      || |||||||||||| ||| |||||||||||||| |||||||||||| ||||||    
T  22880960 aaaaactactatttatacaaatagag-gataactacctagtttgaatttaaaactataactgcag-aaaactacctaatcttagccatacgatttaaata 22880863  T
Q  735 tcgaatatagccgttggaacacttgaccttatccggataaaataactgc-tttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctct 832  Q
    ||||||||||  ||| || |||||||||||||||  | |||||||| || ||||||||| ||   || |||||||  |||||||| || |||||||||||    
T  22880862 tcgaatatagtagtttgagcacttgaccttatcc--aaaaaataaccgcttttcgagatcccttcgcccatcgaacggaggcgcgcgtcttcgattctct 22880765  T
Q  833 tctaaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcattaaatgatacccttt 918  Q
    || |||||||| |||||||| ||| ||| ||||||||| | |||||| ||||||| ||| ||||||  ||||||||||||||||||    
T  22880764 tccaaggagcgcaacttcgacagagatgtaaggtcaagccctttccataaggtcagctcctttgaccacattaaatgatacccttt 22880679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 252 - 918
Target Start/End: Original strand, 16664408 - 16665082
Alignment:
Q  252 aaatttggtaaacaatcgctggtttc-aaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgt 350  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  16664408 aaatttggtaaacaatcgttggtttctaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttatttatctttcgaaagttgt 16664507  T
Q  351 gatgtttgttcttgaagaactttg---ataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatga 447  Q
    | | || |||||||||||||||||   |||||| |||||||||| |||||| ||||||||| |||| |||||||||||||| |||||| ||||||||| |    
T  16664508 ggtattcgttcttgaagaactttggttataaaaacaagaataaacaaaagg-caatcgaattcaacccagttgaatccaatcgaagtacgatgcgaataa 16664606  T
Q  448 aagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattca 547  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| | |||||    
T  16664607 aagtaaatgaattactcaaaataaacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgactgaatgtaggttggtacatagattca 16664706  T
Q  548 tatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaact 647  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||  ||||| ||||||||||||    
T  16664707 tacattgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgaccctttttttctaagaaaaact 16664806  T
Q  648 attatttatacagatagggtaataactaccttg-------ttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaatatcgaat 740  Q
    | |||||||||| |||| |  |||||||||| |       || ||||||||||||  || |||||||||||||| |||||||||||| | ||||||||||    
T  16664807 actatttatacaaatagag-gataactacctagtttaaattttaaaactataactgtag-aaaactacctaatcttagccatacgatttgaatatcgaat 16664904  T
Q  741 atagccgttggaacacttgaccttatccggataaaataactgc-tttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctcttctaag 838  Q
    ||||||||| || |||||||||||||||  | ||||||||  | ||||||||| |    || |||||||  |||||| | || ||||||  || |  | |    
T  16664905 atagccgtttgagcacttgaccttatcc--agaaaataaccacttttcgagatcctttcgcccatcgaacggaggcgtgcgtcttcgatcatccttcagg 16665002  T
Q  839 gagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcattaaatgatacccttt 918  Q
    || |  |||||||||||| ||| ||| |||||||  |||||  |||||||||||||||||  ||||||||||||||||||    
T  16665003 gaacacaacttcgatagagatgtaagatcaagtcccttccatcaggtcaactcttttgaccacattaaatgatacccttt 16665082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 241 - 749
Target Start/End: Original strand, 39227170 - 39227679
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  39227170 tgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttattatcct 39227269  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgat 439  Q
    |   | |  ||||   |||||||| |||| |||||||| || |||||||||| | || |  ||||||||||||| |||||||||||||| ||||| || |    
T  39227270 tttta-gacgtgacacttgttcttaaagatctttgatagaaacaagaataaaaataaagagaatcgaatccaacccagttgaatccaatcgaagtttggt 39227368  T
Q  440 gcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtaca 539  Q
    || ||| | || |||  ||||||| ||||| || |||||||||| |||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||    
T  39227369 gcaaataatagtaaagaaattacttaaaatgaataagtaaattgcaaagacgtttaaagaaatgtattgaaattgcattgactgaataaaagttggtgca 39227468  T
Q  540 catattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttccta 638  Q
    ||| |||||| |||||||||||||| |||||| ||| ||||||||||| | | |||||||||||||||||||||||||||||||| |||  |||||||||    
T  39227469 catgttcatacattgcaacttgtgattcgtttgtcgattccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttccta 39227568  T
Q  639 agaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaatatcg 737  Q
    |||||||||| |||||||||| | |||| ||||||||||| | || ||   || ||||  || |||||||||||| | ||||||| |||| | |||||||    
T  39227569 agaaaaactactatttatacaaacagggaaataactacctagttttaacgttaaaactgtag-aaaactacctaaccatagccattcgatttgaatatcg 39227667  T
Q  738 aatatagccgtt 749  Q
    ||||||||||||    
T  39227668 aatatagccgtt 39227679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 255 - 657
Target Start/End: Original strand, 34827372 - 34827761
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgtgatg 354  Q
    |||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||   |||||||| |||||| || || || || || | ||     
T  34827372 tttggtaaacaaccgctggtttaaaaatatttacttgtaagatcaaccagtaaatcttaaggaaatattgtg-tttgtt-attttccagaaatt-taata 34827468  T
Q  355 tttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaaa 454  Q
    || ||||||||||||||| |||||||| ||| | |||       |||||||||| |||| || ||||||||||| ||| |  | ||  ||| || | |||    
T  34827469 tt-gttcttgaagaactt-gataaaagaaagtaaaaa-------gcaatcgaattcaacccacttgaatccaatcgaaatcgg-tgtaaataaaggtaaa 34827558  T
Q  455 tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattg 554  Q
    |||||| ||||||| ||||||||||| |||||||||||||||  ||||| | | |||||||||||||||||||||| ||||||||||| |||||| |||     
T  34827559 tgaattgctcaaaagaaacaagtaaactgtaaagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacatta 34827658  T
Q  555 caacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta-agaaaaactattatt 653  Q
    ||||||||||||||||| || ||||||| | |||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||  ||||||||| ||||    
T  34827659 caacttgtgactcgtttctctcttccatgcagataatttgagtgtaagttttttgtatgattgaattgtgacc-ctttttcctagggaaaaactactatt 34827757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 456 - 659
Target Start/End: Complemental strand, 22593942 - 22593739
Alignment:
Q  456 gaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgc 555  Q
    ||||| ||||||| |||||||||||||||||||||||||||  ||||| | | |||||||||||||||||| ||| ||||||||||| |||||| |||||    
T  22593942 gaattgctcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattgattgaatataaattggtacacatgttcatacattgc 22593843  T
Q  556 aacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaag-aaaaactattattt 654  Q
    |||||||||||||||| || ||||||| || ||| ||||||||||||||||| ||||||||||||||| ||| ||||| ||| || |||||||| |||||    
T  22593842 aacttgtgactcgtttctctcttccatgcgcataatttgagtgtaagttttttgtatgattgaattgtgacc-cttttcccttagaaaaaactactattt 22593744  T
Q  655 ataca 659  Q
    |||||    
T  22593743 ataca 22593739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 255 - 664
Target Start/End: Original strand, 21256220 - 21256611
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgtgat 353  Q
    |||||||||||| ||||||||| |||| | |||||||||||||||||||||||||||||| || ||||||||| ||||||  | || || || || | ||    
T  21256220 tttggtaaacaaccgctggttttaaaaatatttacttgcaagatcaaccagtaaatcttaggaacatattgtg-tttgttatttttccataaatt-taat 21256317  T
Q  354 gtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaa 453  Q
    ||| ||||||||||||||  |||||||| ||| | |||       |||||||||| |||| ||||||||| |||||||| |  | ||  ||  || | ||    
T  21256318 gtt-gttcttgaagaactc-gataaaagaaagtaaaaa-------gcaatcgaattcaacccagttgaattcaattgaaatcgg-tgtaaacaaaggtaa 21256407  T
Q  454 atgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatatt 553  Q
    ||||||| ||||||| |||||||||||||||||||||||||||  ||||  | | |||||||||||||||||||||| ||||||||||| |||||| |      
T  21256408 atgaattgctcaaaagaaacaagtaaattgtaaagacatttaagaaaataaacttaaattgcattgattgaatgtaaattggtacacatgttcataca-- 21256505  T
Q  554 gcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatt 653  Q
         ||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| ||| ||||| | || | ||||||| ||||    
T  21256506 -----ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccacttttccttagggaaaactactatt 21256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 492 - 663
Target Start/End: Complemental strand, 22648739 - 22648567
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt 591  Q
    ||||||||| ||||||||| ||| |  || | |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | |    
T  22648739 tttaaagaactgtattgaatttgtaaagacttaatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagt 22648640  T
Q  592 -ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagata 663  Q
     |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  22648639 attgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacagata 22648567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 23615082 - 23615251
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt 591  Q
    ||||||||| ||||||||| ||| |  |||| |||| | |||||||||||||||||||  |||||||||||||||||||| |||||||||||| || | |    
T  23615082 tttaaagaactgtattgaatttgtaaagatttaatgaaggttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacagacagt 23615181  T
Q  592 -ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacag 660  Q
     |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  23615182 attgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttatacag 23615251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 474 - 678
Target Start/End: Complemental strand, 24896817 - 24896612
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  |||||||||||||||||||||||||  || | |||| || ||||| ||||| ||||||  ||||||||||||||| |||| |    
T  24896817 aagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactagtttgt 24896718  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataa 672  Q
    |||||||||||| | | | ||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||  | ||||    
T  24896717 cgcttccatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacttataa 24896618  T
Q  673 ctacct 678  Q
    ||||||    
T  24896617 ctacct 24896612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 476 - 664
Target Start/End: Complemental strand, 37130583 - 37130394
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    ||||||| ||||||||||||| |||||| | | |||||| | ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| ||     
T  37130583 gtaaattataaagacatttaaggaaatgaacttaaattgtactgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctct 37130484  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta-agaaaaactattatttatacagatag 664  Q
    ||||||| |||||| ||||| ||||||||||| ||||||||||||||  |||  |||| ||||  ||||||||| |||||||||| ||||    
T  37130483 cttccatgcggataatttgattgtaagttttttgtatgattgaattgcgaccctttttccctagggaaaaactactatttatacaaatag 37130394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 524 - 663
Target Start/End: Original strand, 23190254 - 23190394
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| ||||| |||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  23190254 aatgaaagtttgtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattg 23190353  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagata 663  Q
    | |||  ||||||||||||||||||| ||||||||||||||    
T  23190354 tgacccgtttttcctaagaaaaactactatttatacagata 23190394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 524 - 663
Target Start/End: Original strand, 23203870 - 23204010
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  23203870 aatgaaagttggtacacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattg 23203969  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagata 663  Q
    | |||  ||||||||||||||||||| ||||||||||||||    
T  23203970 tgacccgtttttcctaagaaaaactactatttatacagata 23204010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 524 - 663
Target Start/End: Original strand, 23611509 - 23611649
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| ||||| |||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  23611509 aatgaaagtttgtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattg 23611608  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagata 663  Q
    | |||  ||||||||||||||||||| ||||||||||||||    
T  23611609 tgacccgtttttcctaagaaaaactactatttatacagata 23611649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 476 - 664
Target Start/End: Original strand, 28567675 - 28567862
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||| |||||||||||| |||||| | | |||||  ||||||||||||||| ||||||||||| |||||| ||||||||||||||||| ||| ||     
T  28567675 gtaaattgcaaagacatttaaggaaatgaacttaaattatattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcatttctct 28567774  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcct-aagaaaaactattatttatacagatag 664  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||| |||| |||||||| ||| ||||||| ||||| |||| ||||    
T  28567775 cttccatgcggataatttgagtgtaagttttt-gtatgatagaattgtgacct-tttttcctgaaggaaaactactatttctacaaatag 28567862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 543 - 663
Target Start/End: Complemental strand, 22633939 - 22633818
Alignment:
Q  543 attcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaaga 641  Q
    |||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  22633939 attcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttccaaaga 22633840  T
Q  642 aaaactattatttatacagata 663  Q
    ||||||| ||||||||||||||    
T  22633839 aaaactactatttatacagata 22633818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 452 - 664
Target Start/End: Original strand, 23814916 - 23815137
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgtaaa-------gacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatat 544  Q
    ||||||||| ||||||| ||||||||||||||||||       |||||||||  ||||| | | ||| || ||||||||||||||| ||||||||||| |    
T  23814916 aaatgaattgctcaaaagaaacaagtaaattgtaaactgcaaagacatttaagaaaatgaacttaaagtgtattgattgaatgtaaattggtacacatgt 23815015  T
Q  545 tcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaag-tttttagtatgattgaattgttacctctttttcc-taagaa 642  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| ||| |||||||| ||||| ||||||| ||||||| |||  ||||||| || | |    
T  23815016 tcatacattgcaacttgtgactcgtttctctcttccatgcggataattttagtgtaagtttttttgtatgatagaattgtgacccttttttccttaggga 23815115  T
Q  643 aaactattatttatacagatag 664  Q
    |||||| |||||||||| ||||    
T  23815116 aaactactatttatacaaatag 23815137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 520 - 658
Target Start/End: Complemental strand, 20524274 - 20524136
Alignment:
Q  520 attgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaa 619  Q
    ||||||||||| |||||||| | ||||||| ||||||||||||||||||||| || |||  || |||||| ||||||||||||||||  |||||||||||    
T  20524274 attgaatgtaaattggtacaaaaattcatacattgcaacttgtgactcgtttttctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaa 20524175  T
Q  620 ttgttacctctttttcctaagaaaaactattatttatac 658  Q
    |||| || | ||||||||| |||||||||||||||||||    
T  20524174 ttgtgacatgtttttcctatgaaaaactattatttatac 20524136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 509 - 658
Target Start/End: Original strand, 21904960 - 21905109
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||  || |||  ||  ||||| |||||||||||||||||     
T  21904960 aaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgttcctctcttgaatgtggatagtttgagtgtaagtttttt 21905059  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |||||||||  |||| |||| |||| |||| |||||||||||||||||||    
T  21905060 gtatgattggtttgtgacctgttttccctatgaaaaactattatttatac 21905109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 457 - 658
Target Start/End: Original strand, 10480336 - 10480538
Alignment:
Q  457 aattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgca 556  Q
    |||| ||| |||||||||||||||||| ||||||||||||  |||   | | |||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  10480336 aattgctcgaaataaacaagtaaattgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgca 10480435  T
Q  557 acttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaa-gaaaaactattattta 655  Q
    ||||| |||| |||| || |||  || |||||| || |||||||||||||  ||||||||| ||||| |||  |||  ||||| ||||||||| ||||||    
T  10480436 acttgcgacttgtttctctcttgaatgcggatagttcgagtgtaagttttgtgtatgattggattgtgacccttttcccctaaggaaaaactactattta 10480535  T
Q  656 tac 658  Q
    |||    
T  10480536 tac 10480538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 233 - 330
Target Start/End: Complemental strand, 24897059 - 24896961
Alignment:
Q  233 tgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||| | | |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24897059 tgccaatttgtttatactgaaatttggtaaacaatcgctagtttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 24896961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 10375613 - 10375529
Alignment:
Q  164 actctgaaaccattttttatgcatacaaaatgttgggtcgcgcaaaacttgaaatggttctacttggcgtgccaatttgtttaca 248  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  10375613 actctgaaaccattttttatgcatataaaatgttgggtcgcgcataacttgaaatggtcctactgggcgtgccattttgtttaca 10375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 10376554 - 10376487
Alignment:
Q  8 gaactccatttgtatcttctttgattcttgagacgttacccctctttttattcttcaaattttccttc 75  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10376554 gaactccattcgtatcttctttgattcttgagacgttacccctctttttattcttcaaattttccttc 10376487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 10375726 - 10375627
Alignment:
Q  82 taaataaaatatgaagaacaaacaccatttgtacttgacttccatatggcttnnnnnnnccatttcacttacggtttctgttactctgaaaccatttttt 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||       ||||||||||| |||||| ||||||||| ||||||||||||    
T  10375726 taaataaaatatgaagaacaaacaccatttgtatttgacttccatatggcttaaaaaaaccatttcacttgcggtttttgttactcttaaaccatttttt 10375627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 22635588 - 22635482
Alignment:
Q  225 acttggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatatt 323  Q
    ||||||| || ||||||||||||| | |  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  22635588 acttggcatggcaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatatt 22635489  T
Q  324 gtgcttt 330  Q
    || ||||    
T  22635488 gtacttt 22635482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 509 - 645
Target Start/End: Original strand, 25349263 - 25349399
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||  || |||  || |||||| ||||||||||||||||      
T  25349263 aaattgcattgattgaatgtaaattggtacacatatccatacattgcaacttatgactcgttcctctcttgaatgcggatagtttgagtgtaagttttgt 25349362  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaa 645  Q
    ||||||||  ||||| |||  |||| |||||||||||    
T  25349363 gtatgatttgattgtgacccgttttccctaagaaaaa 25349399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 623
Target Start/End: Original strand, 23803285 - 23803465
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgta-------aagacatttaaagaaatgta-ttgaaattgcattgattgaatgtaagttggtacacata 543  Q
    ||||||||| ||||||| ||||||||||||||||       |||| ||||||  ||||| | || ||| || ||||||||||||||| |||||||||||     
T  23803285 aaatgaattgctcaaaagaaacaagtaaattgtagattgtaaagatatttaagaaaatgaacttaaaagtgtattgattgaatgtaaattggtacacatg 23803384  T
Q  544 ttcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaag-tttttagtatgattgaattgt 623  Q
    |||||| |||||||||||| |||||||| || ||||||| |||||| |||||||| ||| ||||| ||||||| |||||||    
T  23803385 ttcatacattgcaacttgttactcgtttctctcttccatgcggataatttgagtgcaagtttttttgtatgatagaattgt 23803465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 23829764 - 23829908
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgta-------aagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatat 544  Q
    ||||||||| ||||||| ||||||||||||||||       |||||||||||  ||||| | | ||| || ||||||||||||||| ||||||||||| |    
T  23829764 aaatgaattgctcaaaagaaacaagtaaattgtagactgcaaagacatttaagaaaatgaacttaaagtgtattgattgaatgtaaattggtacacatgt 23829863  T
Q  545 tcatatattgcaacttgtgactcgtttatcgcttccatacggata 589  Q
    ||||| ||||||||||||||||||||| || ||||||| ||||||    
T  23829864 tcatacattgcaacttgtgactcgtttctctcttccatgcggata 23829908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 23614824 - 23614900
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23614824 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtacttt 23614900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 24964090 - 24964018
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24964090 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 24964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 592 - 664
Target Start/End: Complemental strand, 24967594 - 24967522
Alignment:
Q  592 ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  24967594 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatag 24967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 236 - 326
Target Start/End: Complemental strand, 22649000 - 22648909
Alignment:
Q  236 caatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||||| | |  |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  22649000 caatttgtttacactgatttttggtaaacaatcactggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 22648909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 616
Target Start/End: Original strand, 23769371 - 23769478
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||| || |||  || |||||| ||||||||||| ||||      
T  23769371 aaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttgaatgcggataatttgagtgtaaattttgt 23769470  T
Q  609 gtatgatt 616  Q
    ||||||||    
T  23769471 gtatgatt 23769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 23203554 - 23203656
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||  ||||||||||| | |  |||||||||| |||| |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23203554 ggcgtgctgatttgtttacactgatttttggtaaaccatcgttggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 23203653  T
Q  328 ttt 330  Q
    |||    
T  23203654 ttt 23203656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 20442361 - 20442213
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    ||||||||||||| |||||||| |||||||| | ||||||| ||||  |||||| ||||||||||| ||   || |||||| ||||| ||||||||||      
T  20442361 aaattgcattgatcgaatgtaaattggtacagagattcatacattgtgacttgttactcgtttatctctga-atgcggatagtttgattgtaagttttct 20442263  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||||||||||||| || |  |||||||| ||||||||| |||||||||    
T  20442262 gtatgattgaattgtgacatgcttttcctatgaaaaactactatttatac 20442213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 535 - 664
Target Start/End: Original strand, 23870534 - 23870663
Alignment:
Q  535 gtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctcttttt 634  Q
    |||||||| |||||| ||||||||||||||||||||| || ||  | | |  ||| ||||||||||||||||| ||||||||||||||| ||| ||||||    
T  23870534 gtacacatgttcatacattgcaacttgtgactcgtttctctctctcgtgcaaataatttgagtgtaagttttttgtatgattgaattgtgaccacttttt 23870633  T
Q  635 cctaagaaaaactattatttatacagatag 664  Q
      || ||||||||| |||||||||| ||||    
T  23870634 tttaggaaaaactactatttatacaaatag 23870663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 471 - 658
Target Start/End: Original strand, 30051852 - 30052039
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattca-tatattgcaacttgtgactcgt 569  Q
    ||||||||||||| ||||  ||||||||||||  |   ||||||||| || ||||||||| |||||||||| ||||| || ||||  |||||| ||||||    
T  30051852 aacaagtaaattgcaaaggaatttaaagaaataaaagtaaattgcatagactgaatgtaaattggtacacagattcaatacattgtgacttgttactcgt 30051951  T
Q  570 ttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    || || ||   || |||||| ||||||||||||||||  ||||||||||||||| |||  ||||||||| ||||| ||| |||||||||    
T  30051952 ttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactatttatac 30052039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 471 - 658
Target Start/End: Original strand, 30142896 - 30143083
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattca-tatattgcaacttgtgactcgt 569  Q
    ||||||||||||| ||||  ||||||||||||  |   ||||||||| || ||||||||| |||||||||| ||||| || ||||  |||||| ||||||    
T  30142896 aacaagtaaattgcaaaggaatttaaagaaataaaagtaaattgcatagactgaatgtaaattggtacacagattcaatacattgtgacttgttactcgt 30142995  T
Q  570 ttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    || || ||   || |||||| ||||||||||||||||  ||||||||||||||| |||  ||||||||| ||||| ||| |||||||||    
T  30142996 ttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactatttatac 30143083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 471 - 658
Target Start/End: Original strand, 30089867 - 30090054
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattca-tatattgcaacttgtgactcgt 569  Q
    ||||||||||||| ||||  ||||||||||||  |   ||||||||| || ||||||||| |||||||||||||||| || ||||  |||||| |||| |    
T  30089867 aacaagtaaattgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgacttgttactcat 30089966  T
Q  570 ttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    || || ||   || |||||| ||||||||||||||||  ||||||||||||||| |||  ||||||||| ||||| | | |||||||||    
T  30089967 ttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaagcgactatttatac 30090054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 471 - 658
Target Start/End: Original strand, 30126472 - 30126659
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattca-tatattgcaacttgtgactcgt 569  Q
    ||||||||||||| ||||  ||||||||||||  |   ||||||||| || ||||||||| |||||||||||||||| || ||||  |||||| |||| |    
T  30126472 aacaagtaaattgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgacttgttactcat 30126571  T
Q  570 ttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    || || ||   || |||||| ||||||||||||||||  ||||||||||||||| |||  ||||||||| ||||| | | |||||||||    
T  30126572 ttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaagcgactatttatac 30126659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 657
Target Start/End: Complemental strand, 22708291 - 22708169
Alignment:
Q  535 gtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctcttttt 634  Q
    |||||||| |||||| ||||||| |||||| |||||| || ||| ||| |||||| ||| ||||||||||||| |||| |||||||||| ||| |||||     
T  22708291 gtacacatgttcatacattgcaatttgtgattcgtttctctcttgcatgcggataatttaagtgtaagttttttgtataattgaattgtgaccacttttc 22708192  T
Q  635 cctaagaaaaactattatttata 657  Q
    |  | ||||||||| ||||||||    
T  22708191 ctgaggaaaaactactatttata 22708169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 20442629 - 20442546
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctt 312  Q
    |||||||||||||||||||  ||   |||||||||||| ||||||||| |||||  ||||||||||||| ||||||||||||||    
T  20442629 ggcgtgccaatttgtttaccctagtttttggtaaacaaccgctggtttaaaaatagttacttgcaagattaaccagtaaatctt 20442546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 23803107 - 23803185
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt 333  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||| ||||||||||| |||  ||||||||| ||||||    
T  23803107 tttggtaaacaatcgctggtttaaaaatagttacttgtaagatcatccagtaaatctgaaggacatattgtgttttgtt 23803185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 23814728 - 23814806
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt 333  Q
    |||||||||||| ||||||||| |||||  ||||||||||||||||| |||||||||||||  || |||||| ||||||    
T  23814728 tttggtaaacaaccgctggtttaaaaatagttacttgcaagatcaacaagtaaatcttaaggacaaattgtgttttgtt 23814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 23189991 - 23190040
Alignment:
Q  281 atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  23189991 atgtttacttgcaagctcaaccagtaaatcttaggagcatattgtgcttt 23190040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 23611246 - 23611295
Alignment:
Q  281 atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  23611246 atgtttacttgcaagctcaaccagtaaatcttaggagcatattgtgcttt 23611295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 658
Target Start/End: Original strand, 23995665 - 23995797
Alignment:
Q  525 atgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgtt 624  Q
    |||||| |||||||||| ||||||| ||||  |||||| |||||||| || ||   || | |||| ||||||||||||||||  |||||||||||||||     
T  23995665 atgtaaattggtacacagattcatacattgtgacttgttactcgtttctctctaa-atgcagatagtttgagtgtaagttttctgtatgattgaattgtg 23995763  T
Q  625 acctctttttcctaagaaaaactattatttatac 658  Q
    || | |||||||||  |||||||| |||||||||    
T  23995764 acatgtttttcctataaaaaactactatttatac 23995797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 28567440 - 28567526
Alignment:
Q  239 tttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||| | || |||||||||||| |||| |||| ||||| ||||||||||||||||| |||||||||||| |  |||||||||    
T  28567440 tttgtttacactgaattttggtaaacaaccgctagtttaaaaatatttacttgcaagatcaa-cagtaaatcttagggacatattgtg 28567526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 22594065 - 22594004
Alignment:
Q  265 aatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||| |||||| |||||  ||||||||||||||||||| |||||||||||| |||||||||    
T  22594065 aatcgttggtttaaaaatagttacttgcaagatcaaccaataaatcttaagaacatattgtg 22594004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 23769132 - 23769191
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaa 314  Q
    ||||||||||||||  |||||| ||| |  ||||||||||||||||||||||||||||||    
T  23769132 tttggtaaacaatcattggtttaaaattaattacttgcaagatcaaccagtaaatcttaa 23769191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 23829609 - 23829654
Alignment:
Q  288 cttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt 333  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||    
T  23829609 cttgcaagatcaaccagtaaatcttaaggacatattgtgttttgtt 23829654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 10479932 - 10480004
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgt-ttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| |||| |||| |||||   ||||||||||||||||| |||||||||||||  |||||||||    
T  10479932 tttggtaaacaaccgctagtttaaaaattaattacttgcaagatcaactagtaaatcttaaggacatattgtg 10480004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 25349019 - 25349090
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| ||||||||| ||| |  |||||||| |||| ||||||||||||||| |  |||||||||    
T  25349019 tttggtaaacaaccgctggtttaaaattagttacttgctagattaaccagtaaatcttagggacatattgtg 25349090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 571
Target Start/End: Original strand, 30244066 - 30244167
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattc-atatattgcaacttgtgactcgt 569  Q
    ||||||||||||| ||||  ||||||||||||  |   ||||||||| || ||||||||| |||||||||| |||| ||| ||||  |||||| ||||||    
T  30244066 aacaagtaaattgcaaaggaatttaaagaaataaacgtaaattgcatagactgaatgtaaattggtacacaaattcaatacattgtgacttgttactcgt 30244165  T
Q  570 tt 571  Q
    ||    
T  30244166 tt 30244167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 384; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 241 - 850
Target Start/End: Original strand, 41438566 - 41439175
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |    
T  41438566 tgtttacactgaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatactgtgctttatttgtctct 41438665  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatg 440  Q
       || |||| |||||||||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||| |||||||||||    
T  41438666 ttgaaattgtaatgtttgttcttgaaagactttgataaaagcaagaataaataaaaggt-aattgaatccaacccagttgaatccaatcgaagtatgatg 41438764  T
Q  441 cgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacac 540  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||    
T  41438765 cgaataaaagtaaatgaattactcaaaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgactggatgtaagttggtatac 41438864  T
Q  541 atattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaag 640  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||    
T  41438865 atattcatacattgcaacttgtgactcgttcatcgcttccatacggatattttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaag 41438964  T
Q  641 aaaaactattatttatacagatagggtaataactaccttgt-tgaaaactataactacagaaaaactacctaatcctagccatacgatctaaatatcgaa 739  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  41438965 aaaaactactatttatacagatagggtaataactacctagtatgaaaactataactgcagaaaaactacctaatcctagccatacgatctaagtatcgaa 41439064  T
Q  740 tatagccgttggaacacttgaccttatccggataaaataactgctttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctcttctaag 838  Q
    ||||||||||| ||  |||||||||||||||| ||||||||    |||||||| |  | || ||||||| |||||||||||| ||||||||||| |  ||    
T  41439065 tatagccgttgaaatgcttgaccttatccgga-aaaataaccatcttcgagatccatccgcccatcgaacagaggcgcgtgtcttcgattctctccctag 41439163  T
Q  839 gagcgtaacttc 850  Q
    ||||||||||||    
T  41439164 gagcgtaacttc 41439175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 299 - 872
Target Start/End: Original strand, 29707946 - 29708521
Alignment:
Q  299 aaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagg 398  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||      
T  29707946 aaccagtaaatcttaagagcatattgtgctttgtttatctttcgaaagttgtaatgtttgttcttgaagaactttgataaaa-caagaataaataaaaaa 29708044  T
Q  399 gcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaag 498  Q
    | ||||||||||||| |||||||||||||| |||||| |||||||||||||| |||  ||||||||||||||||||||||||||| ||| ||||||||||    
T  29708045 ggaatcgaatccaacccagttgaatccaatcgaagtacgatgcgaatgaaagtaaacaaattactcaaaataaacaagtaaattgcaaaaacatttaaag 29708144  T
Q  499 aaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtg 598  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||||| || | |||||| |    
T  29708145 aaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgactcgttagtcgcttccatacagacaatttgagcg 29708244  T
Q  599 taagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactac 697  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||||||||| || ||||||||| | || ||||||||||||      
T  29708245 taagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacagataggatactaactacctagtttaaaaactataactgt 29708344  T
Q  698 ag-aaaaactacctaatcctagccatacgatctaaatatcgaatatagccgttggaacacttgaccttatccggataaaataactgctttcgagattccc 796  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| |||    
T  29708345 agaaaaaactacctaatcctagccatacaatctaaatatcgaatatagccgttagaacacttgaccttatccgga-gaaataactgctttcgagatcccc 29708443  T
Q  797 ctgctcatcgaa-agaggcgcgtgtattcgattctcttctaaggagcgtaacttcgatagaa-atgcaaggtcaagtc 872  Q
      |  ||||||| | || ||||  | ||||||||||||| ||||| | ||||||||||| || |||||||||||||||    
T  29708444 tcgtccatcgaacaaagacgcgcatcttcgattctcttccaaggaacataacttcgatataacatgcaaggtcaagtc 29708521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 240 - 664
Target Start/End: Complemental strand, 18735784 - 18735364
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| | | ||||||||    
T  18735784 ttgtttacactgaaatttggtaaacaatcgctggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtg-tctatttatctt 18735686  T
Q  340 tcaaaagttgtgatgtttgttctt-gaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatga 438  Q
      | || || |||| ||||||||| ||||||||| |||||||  ||  ||||  ||||  |||||||||| |||  |||||||| ||||| ||||   |     
T  18735685 ctagaaattttgatatttgttctttgaagaactt-gataaaacgaa--ataagaaaaaaagcaatcgaattcaatccagttgaacccaatcgaagaccgg 18735589  T
Q  439 tgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtac 538  Q
    |   ||| ||||  |||||||| ||||||| |||||||||||||| ||||||||||||  ||||| | | |||||||||||||||||||||  |||||||    
T  18735588 tataaataaaagtgaatgaattgctcaaaagaaacaagtaaattgcaaagacatttaagaaaatgaacttaaattgcattgattgaatgtagattggtac 18735489  T
Q  539 acatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta 638  Q
    | ||||||||| ||||||||||||||||||||| |  ||||||| |||||| ||||||||||||||||| ||||||||||||||| |||  |||||| ||    
T  18735488 agatattcatacattgcaacttgtgactcgtttctttcttccatgcggataatttgagtgtaagttttt-gtatgattgaattgtgacccttttttctta 18735390  T
Q  639 agaaaaactattatttatacagatag 664  Q
    ||| |||||| |||||||||| ||||    
T  18735389 agagaaactactatttatacaaatag 18735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 420 - 768
Target Start/End: Complemental strand, 22064825 - 22064476
Alignment:
Q  420 gaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattg 519  Q
    ||||||||| ||||| |||||| ||| | || |||  |||||||  |||| || |||||||||| |||| ||||||||||||||||||||||||||||||    
T  22064825 gaatccaatcgaagtttgatgcaaataacagtaaagaaattacttcaaatgaataagtaaattgcaaagtcatttaaagaaatgtattgaaattgcattg 22064726  T
Q  520 attgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatat-tttgagtgtaagtttttagtatgattga 618  Q
    | |||||  |||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||    
T  22064725 actgaataaaagttggtgcacacgttcatacattgcaacttgtgactcgtttgtcgcttccatacggacatcattaagtgtaagtttttagtatgattga 22064626  T
Q  619 attgttacctctttttcctaagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatccta 717  Q
    ||||| |||  ||||||||||||||||||| |||||||||| | |||| ||||||||||| | || ||   || || |  || |||||||||||||| ||    
T  22064625 attgtgacccttttttcctaagaaaaactactatttatacaaacagggaaataactacctagttttaacgttagaattgtag-aaaactacctaatctta 22064527  T
Q  718 gccatacgatctaaatatcgaatatagccgttggaacacttgaccttatcc 768  Q
    ||||| |||| | |||||||||||||||||||   ||| ||||||||||||    
T  22064526 gccattcgatttgaatatcgaatatagccgttacgacatttgaccttatcc 22064476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 241 - 664
Target Start/End: Original strand, 25388701 - 25389126
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgt-ttatct 338  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| | |||||     
T  25388701 tgtttacactgaaatttggtaaacaatcgctggtttcaaagatgttcacttgcaagatcaaccaataaatcttaagagcatattgtgctttttattatcc 25388800  T
Q  339 --ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaattgaagta 435  Q
      |||||| ||    ||  |||||||| |||||||||||| ||| | |||| ||| || ||   ||||||||||||||||| ||||||||||| |||||     
T  25388801 gcttcaaacgta---atacttgttcttaaagaactttgattaaaacgagaacaaaatacaaa--caatcgaatccaactcaattgaatccaatcgaagtt 25388895  T
Q  436 tgatgcgaatgaaagcaaatgaattactcaaaa-taaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttg 534  Q
    |  ||  ||| | || |||  || |||| |||| |    ||||| |||| |||||  |||||||| |||||||||||||| |  |||| |||| || |||    
T  25388896 tagtgtaaataacagtaaagaaaatacttaaaaatgcttaagtagattgcaaagatgtttaaagacatgtattgaaattgtaaagatttaatgaaaattg 25388995  T
Q  535 gtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttt 633  Q
    || ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||||| |||  ||||    
T  25388996 gtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgaccaatttt 25389095  T
Q  634 tcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||||| |||||||||| ||||    
T  25389096 tcctaagaaaaactactatttatacaaatag 25389126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 240 - 664
Target Start/End: Original strand, 12820940 - 12821366
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc-tttgtttatc 337  Q
    ||||||||| | || |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||| |||   ||||    
T  12820940 ttgtttacactgaactttggtaaacaatcgctggttttaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatatcgtgcgtttcactatc 12821039  T
Q  338 t--ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaattgaagt 434  Q
    |  |||| |   ||| ||  |||||||| |||||||||||||||| |||||| ||| |  ||  |  |||||||||||| ||||||||||||||||||||    
T  12821040 tgtttcaga---tgtaatacttgttcttaaagaactttgataaaaacaagaacaaaatgcaaatg--atcgaatccaacccagttgaatccaattgaagt 12821134  T
Q  435 atgatgcgaatgaaagcaaatgaattactca-aaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagtt 533  Q
     |  ||  |||||  | |||  || |||| | ||||    |||||||||| |||||  |||||| ||||||||||| ||||||  ||   |||| || ||    
T  12821135 ttagtgtaaatgaccgtaaagaaaatacttagaaatgcttaagtaaattgcaaagatgtttaaaaaaatgtattgacattgcaaagacataatgaaaatt 12821234  T
Q  534 ggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctcttt 632  Q
    ||| ||||||||||||  ||||||||| |||||||||| ||||||||||||||| | | |||| |||||||||| |||||||||||||||| || | |||    
T  12821235 ggtgcacatattcatactttgcaacttatgactcgtttgtcgcttccatacggacagtattgattgtaagttttgagtatgattgaattgtgacatgttt 12821334  T
Q  633 ttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||||  |||||||||| ||||    
T  12821335 ttcctaagaaaaactgctatttatacaaatag 12821366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 17426099 - 17426240
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  17426099 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 17426198  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  17426199 tgacccatttttcctaagaaaaactactatttatacagatag 17426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 452 - 664
Target Start/End: Original strand, 22698023 - 22698242
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgta-------aagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatat 544  Q
    ||||||||||||||||| ||||||||||||||||       |||||||||||  ||||| | | ||| || ||||||||| ||||| ||||||||||| |    
T  22698023 aaatgaattactcaaaagaaacaagtaaattgtagactgccaagacatttaagaaaatgaacttaaaatgtattgattgactgtaaattggtacacatgt 22698122  T
Q  545 tcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaa 644  Q
    ||||| ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||| ||||||| |||  ||||||||| | |||    
T  22698123 tcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgacccttttttcctagggaaa 22698222  T
Q  645 actattatttatacagatag 664  Q
    |||| |||||||||| ||||    
T  22698223 actactatttatacaaatag 22698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 476 - 664
Target Start/End: Complemental strand, 15337493 - 15337305
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||| |||||| ||||| |||||| | | |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||  ||     
T  15337493 gtaaattgcaaagacttttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttgctct 15337394  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||| | || |||| |||| | ||||||| |||||||||| ||||    
T  15337393 cttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgatcttttttccctagggaaaactactatttatacaaatag 15337305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 476 - 664
Target Start/End: Complemental strand, 15426558 - 15426370
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||| |||||| ||||| |||||| | | |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||  ||     
T  15426558 gtaaattgcaaagacttttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttgctct 15426459  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||| | || |||| |||| | ||||||| |||||||||| ||||    
T  15426458 cttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgatcttttttccctagggaaaactactatttatacaaatag 15426370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 476 - 664
Target Start/End: Complemental strand, 15517862 - 15517674
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||| |||||| ||||| |||||| | | |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||  ||     
T  15517862 gtaaattgcaaagacttttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttgctct 15517763  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||| | || |||| |||| | ||||||| |||||||||| ||||    
T  15517762 cttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgatcttttttccctagggaaaactactatttatacaaatag 15517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 529 - 664
Target Start/End: Original strand, 16667962 - 16668098
Alignment:
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacc 627  Q
    |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||| ||| | | |||||||||||||||||||||||||||||||| |||    
T  16667962 aagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaattgtgacc 16668061  T
Q  628 tctttttcctaagaaaaactattatttatacagatag 664  Q
     |||||||||||||||||||| |||||||||||||||    
T  16668062 actttttcctaagaaaaactactatttatacagatag 16668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 22351966 - 22352157
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||  |  || | |||| || |||||  |||||||||||  |||||||||||||||||||| |    
T  22351966 aagtaaattgcaaagatgtttaaagaaatgtattgaatttataaagacttaatgaaaattggtggacatattcatactttgcaacttgtgactcgtttgt 22352065  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  22352066 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 22352157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 20193157 - 20193298
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||| |||||||    
T  20193157 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattg 20193256  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||| ||||||||||||| |||||||||||||||    
T  20193257 tgacccattttttctaagaaaaactactatttatacagatag 20193298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 22065001 - 22064900
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  22065001 ggcgtgccaatttgtttacattgaaatttggtaaacaattgctggtttcaaaatgtttaattgcaagatcaactagtaaatcttaagagcatattgtgct 22064902  T
Q  329 tt 330  Q
    ||    
T  22064901 tt 22064900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 465 - 658
Target Start/End: Complemental strand, 15911905 - 15911712
Alignment:
Q  465 aaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtga 564  Q
    |||| |||||||||||||||||||||| ||||   ||   | | |||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||    
T  15911905 aaaacaaacaagtaaattgtaaagacaattaagagaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtga 15911806  T
Q  565 ctcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||||| || |||  || |||||| ||||||||||||||||  |||||||||  |||| |||| |||| | || ||||||||| |||||||||    
T  15911805 ctcgtttctctcttgaatgcggatagtttgagtgtaagttttgtgtatgattggtttgtgacctattttccttatgaaaaactactatttatac 15911712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 22697823 - 22697927
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | || |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |    
T  22697823 ggcgtgccaatttgtttacactgaattttggtaaacaatcgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtt 22697922  T
Q  329 ttgtt 333  Q
    |||||    
T  22697923 ttgtt 22697927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 466 - 658
Target Start/End: Complemental strand, 27818381 - 27818187
Alignment:
Q  466 aaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgac 565  Q
    |||||||||||||||||| ||||||||||||  |||   | | |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  27818381 aaataaacaagtaaattgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgac 27818282  T
Q  566 tcgtttatcgcttccatacggata--ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaa-gaaaaactattatttatac 658  Q
    |||||| || ||| |||| |||||  |||| ||||||||||||  |||| |||| ||||| ||| | ||| ||||| ||||||||| |||||||||    
T  27818281 tcgtttctctcttgcatatggatagtttttaagtgtaagttttgtgtatcattggattgtgacc-cctttccctaaggaaaaactactatttatac 27818187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 22351716 - 22351815
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||   |  ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22351716 gtgccaatttgtttacaccgatttttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaactagtaaatcttaagagcatattgtgcttt 22351815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 233 - 330
Target Start/End: Original strand, 17425786 - 17425884
Alignment:
Q  233 tgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17425786 tgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 17425884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 229 - 329
Target Start/End: Complemental strand, 15912087 - 15911987
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||||| |  |||||||||||| ||||||||| ||| |  ||| ||||||||||| |||||||||||||||  |||||||||||    
T  15912087 ggcgtgccaatttgtttacattgatttttggtaaacaaccgctggtttaaaattaattatttgcaagatcatccagtaaatcttaaggacatattgtgct 15911988  T
Q  329 t 329  Q
    |    
T  15911987 t 15911987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 20192866 - 20192942
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||| | |||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  20192866 tttggtaaacaattgttggtttcaatgatgtttacttgcaagaccaaccagtaaatcttaggagcatattgtgcttt 20192942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 470 - 658
Target Start/End: Original strand, 22698679 - 22698866
Alignment:
Q  470 aaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgt 569  Q
    |||||||||||||| ||||  |||||| ||||   | | ||||||||||||||||| |||| ||||||  |||||||||| |||   | |||| |||| |    
T  22698679 aaacaagtaaattgaaaaggaatttaaggaaacaaacttaaattgcattgattgaaagtaaattggtatgcatattcatacattttgatttgtaactcat 22698778  T
Q  570 ttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    || || || | || |||||| ||||||||||||||||  ||||| ||||||||| |||  ||||||||| || ||||| ||||||||||    
T  22698779 ttctctctac-atgcggataatttgagtgtaagttttctgtatggttgaattgtgacccttttttcctatgagaaactgttatttatac 22698866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 15337712 - 15337641
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||| || ||||||||||  |||||||||    
T  15337712 tttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaactaggaaatcttaaggacatattgtg 15337641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 15426777 - 15426706
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||| || ||||||||||  |||||||||    
T  15426777 tttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaactaggaaatcttaaggacatattgtg 15426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 15518081 - 15518010
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||| || ||||||||||  |||||||||    
T  15518081 tttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaactaggaaatcttaaggacatattgtg 15518010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 591 - 658
Target Start/End: Complemental strand, 16778014 - 16777947
Alignment:
Q  591 tttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||||||||||||||  ||||||||||||||| | |  ||||||||| |||||||||||||||||||    
T  16778014 tttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaaaactattatttatac 16777947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 16778313 - 16778256
Alignment:
Q  259 gtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaaga 316  Q
    |||||||| |||||||||  ||||| ||||||||||||||||||||||||| ||||||    
T  16778313 gtaaacaaccgctggtttacaaatggttacttgcaagatcaaccagtaaattttaaga 16778256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 509 - 658
Target Start/End: Original strand, 24974281 - 24974432
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatatt-gcaacttgtgactcgtttatcgcttccatacggatattttgagtg--taagttt 605  Q
    |||||||||  ||||||||||| |||||||| | ||||| | ||| |||| |||| |||||||| || |||  || | |||| ||||||||  |||||||    
T  24974281 aaattgcataaattgaatgtaaattggtacatagattcaaagatttgcaaattgttactcgtttctc-cttgaatgcagatagtttgagtgcgtaagttt 24974379  T
Q  606 ttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |  || |||||||||||| |||| ||||||||  |||||||||||||||||||    
T  24974380 tgcgtgtgattgaattgtgacctttttttcctttgaaaaactattatttatac 24974432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 509 - 571
Target Start/End: Original strand, 17637857 - 17637919
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgttt 571  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||  |||||| ||||||||    
T  17637857 aaattgcattgattgaatgtaaattggtacacggattcatacattgtgacttgttactcgttt 17637919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 621
Target Start/End: Complemental strand, 18846895 - 18846786
Alignment:
Q  511 attgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagt 610  Q
    |||||||||||||||||||| || ||||||| ||||||| |||   |||||| |||||||| || | |  ||||||||| ||| ||||||||||||  ||    
T  18846895 attgcattgattgaatgtaaatttgtacacagattcatacattctgacttgttactcgtttctctc-tagatacggatagtttaagtgtaagttttctgt 18846797  T
Q  611 atgattgaatt 621  Q
    ||| |||||||    
T  18846796 atggttgaatt 18846786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Original strand, 16667699 - 16667736
Alignment:
Q  289 ttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16667699 ttgcaagatcaaccagtaaatcttaggagcatattgtg 16667736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 570
Target Start/End: Complemental strand, 16778096 - 16778017
Alignment:
Q  491 atttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtt 570  Q
    |||||||| |||| | | |||||||||  ||||||||||| |||||||||| ||||||| ||||  |||||| |||||||    
T  16778096 atttaaaggaatgaacttaaattgcataaattgaatgtaaattggtacacaaattcatacattgtgacttgttactcgtt 16778017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 17839785 - 17839840
Alignment:
Q  259 gtaaacaatcgctggtttcaaaatgt-ttacttgcaagatcaaccagtaaatctta 313  Q
    |||||||| ||||||||| |||||   |||||||||||||||||||||||||||||    
T  17839785 gtaaacaaccgctggttttaaaattagttacttgcaagatcaaccagtaaatctta 17839840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 750
Target Start/End: Original strand, 22352164 - 22352211
Alignment:
Q  703 aactacctaatcctagccatacgatctaaatatcgaatatagccgttg 750  Q
    |||||||||||| ||||||| |||| | ||||||||||||||||||||    
T  22352164 aactacctaatcatagccattcgatttgaatatcgaatatagccgttg 22352211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 283 - 313
Target Start/End: Original strand, 24974100 - 24974130
Alignment:
Q  283 gtttacttgcaagatcaaccagtaaatctta 313  Q
    |||||||||||||||||||||||||||||||    
T  24974100 gtttacttgcaagatcaaccagtaaatctta 24974130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 13764313 - 13764385
Alignment:
Q  258 ggtaaacaatcgctggtttc-aaaatgtt-tacttgcaagatcaaccagtaaatcttaagagcatattgtgctt 329  Q
    ||||||||| || ||||||| |||||| | ||||||| |||||||||||||||||| ||| |||||||||||||    
T  13764313 ggtaaacaaacgttggtttccaaaatgatgtacttgcgagatcaaccagtaaatctcaag-gcatattgtgctt 13764385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 18847104 - 18847047
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctt 312  Q
    |||||||||||| ||||||||| ||| |  || ||||||| |||||||||||||||||    
T  18847104 tttggtaaacaaccgctggtttaaaattaattgcttgcaatatcaaccagtaaatctt 18847047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 320; Significance: 1e-180; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 229 - 659
Target Start/End: Original strand, 33044 - 33475
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33044 ggcgtgccaatttatttacactaaaatttggtaaacaatcgctggtttcaaaatgtttacttacaagatcaaccagtaaatattaagagcatattgtgct 33143  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaa 427  Q
    || ||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  33144 ttatttatctctttaaaattgtgatgtttgttcttgaagaactttgataaaagcaagaataaaataaaagggcaatcgaatccaacctagttgaatccaa 33243  T
Q  428 ttgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatg 527  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||    
T  33244 tcgaagtatgatgcgaatgaaagtaaatgaattactcaaaataaacaagtaaattgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatg 33343  T
Q  528 taagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacc 627  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| |||    
T  33344 taagttggtacacatattcatacattccaacttgtgactcgtttatcgcttccatatggatagtttgagcgtaagtttttagtatgattgaattgtgacc 33443  T
Q  628 tctttttcctaagaaaaactattatttataca 659  Q
      ||||||||||||||||||| ||||||||||    
T  33444 cgtttttcctaagaaaaactactatttataca 33475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 684 - 918
Target Start/End: Original strand, 37085 - 37319
Alignment:
Q  684 aaaactataactacagaaaaactacctaatcctagccatacgatctaaatatcgaatatagccgttggaacacttgaccttatccggataaaataactgc 783  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||  | |||||||| ||    
T  37085 aaaactataactgcagaagaactacctaatcctagccatacgatttgaatatcgaatatagtcgtttgaacacttgaccttatccaaa-aaaataaccgc 37183  T
Q  784 tttcgagattcccctgctcatcgaa-agaggcgcgtgtattcgattctcttctaaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaa 882  Q
    ||||||||| ||   || ||||||  ||||||||| || ||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||| ||    
T  37184 tttcgagatcccttcgcccatcgaccagaggcgcgcgtcttcgattctcttccaaggagcgcaacttcaatagaaatgcaaggtcaagtctttcccataa 37283  T
Q  883 ggtcaactcttttgacttcattaaatgatacccttt 918  Q
     ||||||| |||||||  ||||||||||||||||||    
T  37284 agtcaactattttgaccacattaaatgatacccttt 37319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 240 - 918
Target Start/End: Original strand, 12844288 - 12844967
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatct 338  Q
    ||||||||| | |||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12844288 ttgtttacactgaaatttggtaaggaatcgctggtttaaaaaatgtttacttgcaagatcaaccagtaaatcttaagatcatattgtgctttgtttatct 12844387  T
Q  339 ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatga 438  Q
    ||| |||||| |||   ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||  |    
T  12844388 ttcgaaagttttgactcttgttcttgaagaactttgataaaaacaagaataaataaaaggg-aatcgaatccaac-cagttgaatccaatcgaagtacaa 12844485  T
Q  439 tgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtac 538  Q
    |||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  12844486 tgcgaatgaaaataaatgaattacttaaaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgt 12844585  T
Q  539 acatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta 638  Q
    |||| |||||| |||||||||||| |||||||  ||||||||||||||| | |||||| |||||||||||||||||||||||||| |||  |||| ||||    
T  12844586 acattttcatacattgcaacttgtaactcgttagtcgcttccatacggacagtttgagcgtaagtttttagtatgattgaattgtgacccattttcccta 12844685  T
Q  639 agaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaatatcg 737  Q
    |||||||||| |||||||| | |||||||||||||||||| | || |||||||||||  ||||||||||| |||||| ||||||| |||| |||||||||    
T  12844686 agaaaaactactatttatataaatagggtaataactacctagttttaaaactataacggcagaaaaactaactaatcatagccattcgatttaaatatcg 12844785  T
Q  738 aatatagccgttggaacacttgaccttatccggataaaataactgctttcgagattcccctgctcatcgaaa-gaggcgcgtgtattcgattctcttcta 836  Q
    |||||| ||||| |||||| ||||||||||||||   | ||||| ||||||| || ||  ||| |||||||| | ||| ||  | ||||||||||||| |    
T  12844786 aatataaccgttagaacacatgaccttatccgga-ggagtaactactttcgaaatccctttgcccatcgaaacggggcacgcatcttcgattctcttcca 12844884  T
Q  837 aggagcgtaacttcgatagaaa-tgcaaggtcaagtcttttccacaaggtcaactcttttgacttcattaaatgatacccttt 918  Q
    ||||   || |||||||| ||| ||||||||||||||  |      |||||||||||||||||   |||||||||||||||||    
T  12844885 aggaagatatcttcgataaaaattgcaaggtcaagtccatcttgtgaggtcaactcttttgaccatattaaatgatacccttt 12844967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 229 - 678
Target Start/End: Complemental strand, 13024303 - 13023853
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||      
T  13024303 ggcgtgccaatttgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtat 13024204  T
Q  328 tttgtt-tatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatc 424  Q
    |||||| | ||||| |||  |   || | ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||||||||||    
T  13024203 tttgttatctcttttaaacat---gacgcttgttcttgaagaactttgataaaagcaagaataaaaataaaaaggcaatcgaatccaacccagttgaatc 13024107  T
Q  425 caattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattga 524  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||| |  ||| |||||||||||||||||||||||||| |||||||||    
T  13024106 caatcgaagtatgatgcgaatgaaagtaaatgagttactcaaaataaacaagtaaactacaaaaacatttaaagaaatgtattgaaattgaattgattga 13024007  T
Q  525 atgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgtt 624  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   | ||||||||||||| | |||||||||||||||||||||||||||||||||     
T  13024006 atgtaagttggtacacatattcatacattgcaacttgtgactcgtcagtggcttccatacggacaatttgagtgtaagtttttagtatgattgaattgtg 13023907  T
Q  625 acctctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||  ||||||||||||||||||| | |||||||| | ||||||||||||||||    
T  13023906 acccttttttcctaagaaaaactactttttatacaaagagggtaataactacct 13023853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 241 - 675
Target Start/End: Original strand, 12021191 - 12021628
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatct-t 339  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |    
T  12021191 tgtttacactaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttgttatctct 12021290  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatccaattgaagtatg 437  Q
    |  |||   ||||   |||||| |||| ||||||||||||| ||||||||||  ||||| | ||||||||| |||  |||||||||||||| ||||| ||    
T  12021291 tttaaac--gtgacacttgttcatgaaaaactttgataaaaacaagaataaaattaaaaagacaatcgaattcaatccagttgaatccaatcgaagtttg 12021388  T
Q  438 atgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggta 537  Q
    |||| ||| | || ||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||||||||     
T  12021389 atgcaaataacagtaaaggaattacttaaaatgaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgccatgactgaatgtaagttggtg 12021488  T
Q  538 cacatattcatatattgcaacttgtgactcgtttatcgcttccatacgga-tattttgagtgtaagtttttagtatgattgaattgttacctctttttcc 636  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12021489 cacatattcatacattgcaacttgtgacttgtttgtcgcttccatacgaacaattttgagtgtaagtttttagtatgattgaattgtgacctctttttcc 12021588  T
Q  637 taagaaaaactattatttatac-agatagggtaataacta 675  Q
    |||||||||||| ||||||||| | | |||||||||||||    
T  12021589 taagaaaaactactatttatacaaaacagggtaataacta 12021628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 251 - 562
Target Start/End: Complemental strand, 22445327 - 22445017
Alignment:
Q  251 aaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgt 350  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||  || ||||    
T  22445327 aaaaattggtaaacaatcgttggttttaaaatgtttacttgcaagatcaactagtaaatcttaagagcatattgtgttttatttatctttcggaaattgt 22445228  T
Q  351 gatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaag 450  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||| |||||| |||| |||| || ||||||||||| |||||||||||||||| ||||    
T  22445227 gatgttcgttattgaagaactttgataaaaacaagaataaataaaa-ggcaatagaattcaacccaattgaatccaatcgaagtatgatgcgaataaaag 22445129  T
Q  451 caaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatat 550  Q
      ||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||| ||||| | |||||||||||||||||| |||||||     
T  22445128 tgaatgaattactcaaaataaacaagtaaattgcaaagacatttaaagaaatgaacttaaattggattgactaaatgtaagttggtacacaaattcatac 22445029  T
Q  551 attgcaacttgt 562  Q
    ||||||||||||    
T  22445028 attgcaacttgt 22445017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 356 - 678
Target Start/End: Complemental strand, 12492219 - 12491896
Alignment:
Q  356 ttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaaat 455  Q
    |||||||| |||| |||||||| || |||||||||| | || |  |||||||||||||  ||||||||||||| ||||| || ||| ||| | || |||     
T  12492219 ttgttcttaaagatctttgatagaaacaagaataaaaataaagagaatcgaatccaacctagttgaatccaatcgaagtttggtgcaaataacagtaaag 12492120  T
Q  456 gaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgc 555  Q
     ||||||| ||||| || |||||||||| |||||| |||||||||||||||| |||||||||||| |||||  |||||||| ||||| |||||| |||||    
T  12492119 aaattacttaaaatgaataagtaaattgcaaagacgtttaaagaaatgtattcaaattgcattgactgaataaaagttggtgcacatgttcatacattgc 12492020  T
Q  556 aacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattattt 654  Q
    |||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||    
T  12492019 aacttgtgactcgtttgtcgcttccatacggacattatttagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactattt 12491920  T
Q  655 atacagatagggtaataactacct 678  Q
    ||||| | |||| | |||||||||    
T  12491919 atacaaacagggaagtaactacct 12491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 447 - 638
Target Start/End: Original strand, 132376 - 132567
Alignment:
Q  447 aaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattc 546  Q
    |||| ||||||||| ||||||| |||||||||||||| ||||||||||||  |||   | | |||||||||||||||||||||| ||||||||||| |||    
T  132376 aaagtaaatgaattgctcaaaagaaacaagtaaattgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttc 132475  T
Q  547 atatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttccta 638  Q
    ||| ||||||||||||||||||||| || ||||||| |  ||| |||| |||||||||||| ||||||||||||||| |||  |||||||||    
T  132476 atacattgcaacttgtgactcgtttctctcttccatgcaaataatttgcgtgtaagttttttgtatgattgaattgtgacccttttttccta 132567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 452 - 664
Target Start/End: Original strand, 43135505 - 43135725
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgta-------aagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatat 544  Q
    |||||||||  |||||| ||||||||||||||||       |||||||||||  ||||| | | |||||| ||||||||||||||| ||||||||||| |    
T  43135505 aaatgaattgttcaaaagaaacaagtaaattgtatattgcaaagacatttaagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgt 43135604  T
Q  545 tcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacc-tctttttcctaagaaa 643  Q
    ||||| ||| ||||||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| ||| | ||||||||| | ||    
T  43135605 tcatacattacaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccttttttttcctagggaa 43135704  T
Q  644 aactattatttatacagatag 664  Q
    ||||| |||||||||| ||||    
T  43135705 aactactatttatacaaatag 43135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 7341461 - 7341602
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||    
T  7341461 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattg 7341560  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||| ||||||||||||||||||| |||||||||||||||    
T  7341561 tgacctttttttcctaagaaaaactactatttatacagatag 7341602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 7396207 - 7396348
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||    
T  7396207 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattg 7396306  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||| ||||||||||||||||||| |||||||||||||||    
T  7396307 tgacctttttttcctaagaaaaactactatttatacagatag 7396348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 13299464 - 13299605
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||| ||||||||||||  |||||||||||||||| ||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  13299464 aatgaaagttggtgcacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 13299563  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | ||| |||||||||||||||||||| |||||||||||||||    
T  13299564 tgacccctttttcctaagaaaaactactatttatacagatag 13299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 13310122 - 13310263
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||| ||||||||||||  |||||||||||||||| ||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  13310122 aatgaaagttggtgcacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 13310221  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | ||| |||||||||||||||||||| |||||||||||||||    
T  13310222 tgacccctttttcctaagaaaaactactatttatacagatag 13310263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 14683148 - 14683289
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  14683148 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 14683247  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  14683248 tgacccttttttcctaagaaaaactactatttatacagatag 14683289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 474 - 664
Target Start/End: Complemental strand, 10139945 - 10139754
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   ||||||||| ||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  10139945 aagtaaattgcaaaggtgtttaaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 10139846  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  10139845 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 10139754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 474 - 664
Target Start/End: Complemental strand, 10171312 - 10171121
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   ||||||||| ||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  10171312 aagtaaattgcaaaggtgtttaaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 10171213  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||| ||| ||||    
T  10171212 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttacacaaatag 10171121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 10792634 - 10792493
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  10792634 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacactattgagtgtaagtttttagtatgattgaattg 10792535  T
Q  623 ttacctctttttcctaag-aaaaactattatttatacagatag 664  Q
    | ||| ||||||| |||| |||||||| |||||||||||||||    
T  10792534 tgacc-ctttttcttaagaaaaaactactatttatacagatag 10792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 11887393 - 11887252
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||||    
T  11887393 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttaagtatgattgaattg 11887294  T
Q  623 ttacctctttttcctaag-aaaaactattatttatacagatag 664  Q
    | ||| |||||||||||| |||||||| |||||||||||||||    
T  11887293 tgacc-ctttttcctaagaaaaaactactatttatacagatag 11887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 529 - 664
Target Start/End: Complemental strand, 10779111 - 10778975
Alignment:
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacc 627  Q
    |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||    
T  10779111 aagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 10779012  T
Q  628 tctttttcctaag-aaaaactattatttatacagatag 664  Q
     ||||||| |||| |||||||| |||||||||||||||    
T  10779011 -ctttttcttaagaaaaaactactatttatacagatag 10778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 10140205 - 10140099
Alignment:
Q  225 acttggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatatt 323  Q
    ||||||||||||||||||||| || | |  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  10140205 acttggcgtgccaatttgtttccactgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatatt 10140106  T
Q  324 gtgcttt 330  Q
    |||||||    
T  10140105 gtgcttt 10140099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 13299144 - 13299246
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  13299144 ggcgtgccaatttgtttacactaatttttggtaaacaatcgctggtttccataatgtttacttggaagatcaaccagtaaatcttaggagcatattgtgc 13299243  T
Q  328 ttt 330  Q
    |||    
T  13299244 ttt 13299246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 13309802 - 13309904
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  13309802 ggcgtgccaatttgtttacactaatttttggtaaacaatcgctggtttccataatgtttacttggaagatcaaccagtaaatcttaggagcatattgtgc 13309901  T
Q  328 ttt 330  Q
    |||    
T  13309902 ttt 13309904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 15016929 - 15017005
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagag 317  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15016929 tgtttacactgaaatttggtaaactatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagag 15017005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 7341159 - 7341245
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  7341159 tgtttacactgaattttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 7341245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 7395905 - 7395991
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  7395905 tgtttacactgaattttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 7395991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 10171556 - 10171466
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||| |  |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10171556 tgtttacattgatttttgataaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 10171466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 10779434 - 10779336
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||| ||||||||||||    
T  10779434 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgttaacttgcaagatcaaccggtaaatcttaggagcatattgtg 10779336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 14682842 - 14682928
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||| |  |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||||    
T  14682842 tgtttacattgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaatatcaaccagtaaatcttaggagcatattgtg 14682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 10792926 - 10792854
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  10792926 tttggtaaacaatcgctggtttcaatgatgttaacttgcaagatcaaccagtaaatcttaggagcatattgtg 10792854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 11887724 - 11887652
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  11887724 tttggtaaacaatcgctggtttcaatgatgttaactggcaagatcaaccagtaaatcttaggagcatattgtg 11887652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 509 - 658
Target Start/End: Original strand, 1934634 - 1934775
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||  |||||| |||||||| || ||       | |||  |||||||||||||||      
T  1934634 aaattgcataaattgaatgtaagttggtacacagattcatatattgtgacttgttactcgtttctctct-------gaata-cttgagtgtaagttttat 1934725  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
     |||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  1934726 atatgattgaattgtgacctatttttcctatgaaaaactactatttatac 1934775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 14148090 - 14148020
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  14148090 tttggtaaacaaccgctggtttacaaatggttacttgcaagatcaaccagtaaatcttaaga-catattgtg 14148020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 132202 - 132260
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctta 313  Q
    |||||||||||| || |||||| ||||| ||||||||||||||||||||||||||||||    
T  132202 tttggtaaacaaccgttggtttaaaaatatttacttgcaagatcaaccagtaaatctta 132260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 658
Target Start/End: Complemental strand, 14133486 - 14133303
Alignment:
Q  472 acaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgttt 571  Q
    |||||||||||| || || |||||||| |||| | | ||||| |||  ||||||||||  |||||||| | ||||||| ||||  |||||| ||||||||    
T  14133486 acaagtaaattgcaagga-atttaaaggaatgaacttaaatttcataaattgaatgtatattggtacatagattcatacattgtgacttgttactcgttt 14133388  T
Q  572 atcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
     || ||   || |||||| ||||||| |||||||||  |||||||||||||| ||   |||||| || |||||||||||||||||||    
T  14133387 ctctctga-atgcggatagtttgagtataagtttttt-tatgattgaattgtgactcgtttttcttatgaaaaactattatttatac 14133303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 13101973 - 13101825
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    ||||| |||||||||||||||| |||||||||| ||| ||| ||| | |||||| |||||||| || | |  || |||||| |||||||||| |||||      
T  13101973 aaattacattgattgaatgtaaattggtacacagatttatacatttcgacttgtaactcgtttctctc-taaatgcggatagtttgagtgtatgttttct 13101875  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||| ||||| ||| |||  ||||||||| || |||||  |||||||||    
T  13101874 gtatggttgaactgtgacccgtttttcctatgagaaactgctatttatac 13101825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 700 - 768
Target Start/End: Original strand, 12021637 - 12021705
Alignment:
Q  700 aaaaactacctaatcctagccatacgatctaaatatcgaatatagccgttggaacacttgaccttatcc 768  Q
    ||||||||||||||| |||||||  ||| | ||||||||||||||||||| | ||| ||||||||||||    
T  12021637 aaaaactacctaatcatagccatttgatttgaatatcgaatatagccgttaggacatttgaccttatcc 12021705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 582 - 645
Target Start/End: Complemental strand, 22445013 - 22444950
Alignment:
Q  582 tacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaa 645  Q
    |||||||| |||||  ||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  22445013 tacggatagtttgaacgtaagtttttaatatgattgaattgtgacccttttttcctaagaaaaa 22444950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 43135320 - 43135387
Alignment:
Q  259 gtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| ||||| ||| ||||| |||| ||||||||||||||| |||||||||||  |||||||||    
T  43135320 gtaaacaaccgctgatttaaaaatatttatttgcaagatcaaccaataaatcttaaggacatattgtg 43135387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 1934429 - 1934487
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctta 313  Q
    |||||||||| | || |||||| |||||  |||||||||||||||||||||||||||||    
T  1934429 tttggtaaacgaccgttggtttaaaaatagttacttgcaagatcaaccagtaaatctta 1934487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 13905676 - 13905734
Alignment:
Q  255 tttggtaaacaatcgctggtttc-aaaatgttta-cttgcaagatcaaccagtaaatct 311  Q
    |||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||    
T  13905676 tttggtaaacaaacgctggtttccaaaatggttaacttgcaagatcaaccagtaaatct 13905734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 11887535 - 11887490
Alignment:
Q  281 atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  11887535 atgttaactggcaagatcaaccagtaaatcttaggagcatattgtg 11887490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 14133990 - 14133934
Alignment:
Q  257 tggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctta 313  Q
    ||||||||||  ||||||||  ||||| ||||||||||||||||||| |||||||||    
T  14133990 tggtaaacaactgctggtttacaaatggttacttgcaagatcaaccattaaatctta 14133934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 14000856 - 14000798
Alignment:
Q  513 tgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgttt 571  Q
    |||||||||| ||||||| |||||||||| |||||||||||   |||||| ||||||||    
T  14000856 tgcattgattaaatgtaaattggtacacagattcatatattatgacttgttactcgttt 14000798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 471 - 549
Target Start/End: Original strand, 14345523 - 14345601
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcata 549  Q
    |||||||| |||| ||||  |||||||||||   | | |||||||||||||||||||||| || ||||||| |||||||    
T  14345523 aacaagtatattgcaaaggaatttaaagaaacaaacttaaattgcattgattgaatgtaaattagtacacaaattcata 14345601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 14345320 - 14345377
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctt 312  Q
    ||||| |||||||||||||||| ||| |  ||||||||||||| ||| ||||||||||    
T  14345320 tttggcaaacaatcgctggtttaaaattaattacttgcaagataaactagtaaatctt 14345377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 285; Significance: 1e-159; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 241 - 792
Target Start/End: Original strand, 19686 - 20240
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatct- 338  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  19686 tgtttacactaaaatttggtaaacaatcgctggtttcaaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttgttatctc 19785  T
Q  339 ttcaaaagttgtgatgtttgttcttgaagaa-ctttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatccaattgaagta 435  Q
    ||  |||   |||| | ||||||||||| || ||||||||||| ||||||||||  ||||| |||||| ||||||||||||||||||||||||||||||     
T  19786 ttttaaac--gtgacgcttgttcttgaaaaaactttgataaaaacaagaataaaattaaaaaggcaatagaatccaactcagttgaatccaattgaagtt 19883  T
Q  436 tgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttgg 535  Q
    ||||||||||||||| |||||||||||| ||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19884 tgatgcgaatgaaagtaaatgaattacttaaaatgaacaaataaattgcaaaggcatttaaagaaatgtattgaaattgcattgattgaatgtaagttgg 19983  T
Q  536 tacacatattcatatattgcaacttgtgactcgtttatcgcttccatacgga-tattttgagtgtaagtttttagtatgattgaattgttacctcttttt 634  Q
    | ||  |||||||| ||||||||||||||||| ||| | |||||||||||||  || ||||| |||||||||||||||||||||||||| |||  |||||    
T  19984 tgcatctattcatacattgcaacttgtgactcatttgtagcttccatacggacaatattgagcgtaagtttttagtatgattgaattgtgaccctttttt 20083  T
Q  635 cctaagaaaaactattatttatacagatagggtaataactaccttgt-tgaaaactataactacagaaaaactacctaatcctagccatacgatctaaat 733  Q
    |||||||||||||| |||||||||| | |||||||||||||||| || | |||||||||||| || ||||||||||||||| ||||||| |||| | |||    
T  20084 cctaagaaaaactactatttatacaaacagggtaataactacctagtgtcaaaactataactgca-aaaaactacctaatcatagccattcgatttgaat 20182  T
Q  734 atcgaatatagccgttggaacacttgaccttatccggataaaataactgctttcgagat 792  Q
    |||||||||||||||| | ||| |||||||||| || |  |||||||||||||||||||    
T  20183 atcgaatatagccgttaggacatttgaccttat-cgaaagaaataactgctttcgagat 20240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 241 - 769
Target Start/End: Original strand, 14022147 - 14022679
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt-tatctt 339  Q
    |||||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||    
T  14022147 tgtttacactgaaatttggtaaacaatcgctgatttcaaaatggttacttgcaagatcaaccagtaaaccttaagagcatattgtgctttgttatctctt 14022246  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatccaattgaagtatg 437  Q
    | ||  ||   |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||||||||||||||    
T  14022247 ttaaccgt---gatgtttgttcttgaagaactttgataaaagcaagaataaaaataaaaaggcaatcgaatccaacccagttgaatccaattgaagtatg 14022343  T
Q  438 atgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggta 537  Q
     ||| | | |||| |||||||||||||||||||||||||||||||| || || | ||||||||||||||||||||||||||||||||||||||||| |||    
T  14022344 gtgcaagtaaaagtaaatgaattactcaaaataaacaagtaaattgcaatgatacttaaagaaatgtattgaaattgcattgattgaatgtaagttagta 14022443  T
Q  538 cacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcct 637  Q
    |||||||||||| |||||||||||||||||||   | ||||| ||||||| | ||||||||||||||||||||||||||||||||| |||  ||||||||    
T  14022444 cacatattcatacattgcaacttgtgactcgtcagttgcttctatacggacaatttgagtgtaagtttttagtatgattgaattgtgacccttttttcct 14022543  T
Q  638 aagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacag---aaaaactacctaatcctagccatacgatctaaat 733  Q
    || |||||||| |||||||||| | |||||||||||||||| | || ||||||||||||   |   |||||||||||||||  |||||| |||| ||||     
T  14022544 aaaaaaaactactatttatacaaacagggtaataactacctagttttaaaactataactgttgataaaaaactacctaatcacagccattcgatttaaac 14022643  T
Q  734 atcgaatatagccgtt-ggaacacttgaccttatccg 769  Q
    ||||||| ||||||||   ||||||||||||||||||    
T  14022644 atcgaat-tagccgttaaaaacacttgaccttatccg 14022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 241 - 665
Target Start/End: Original strand, 3077667 - 3078087
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||     
T  3077667 tgtttacactgaaatttggtaaacaatcgctcgtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcgtattgtactta-tttatcttc 3077765  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatg 440  Q
    | ||| |||||||||| ||||||||||||||| |||||||  |||||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||    
T  3077766 cgaaaattgtgatgttcgttcttgaagaactt-gataaaaataagaataaataaaagg-caatcgaattcaacccagttgaatccaatcgaagtatgatg 3077863  T
Q  441 cgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacac 540  Q
    | | | |||| |||||||| ||| |||| |||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  3077864 caattaaaagtaaatgaatcacttaaaagaaacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacac 3077963  T
Q  541 atattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaag 640  Q
    | ||||||| ||| ||||||||| ||||||| | ||||||||||||||| ||||||  ||||||||| ||||||||||||||| |||| ||||| |||||    
T  3077964 agattcatacattacaacttgtggctcgtttcttgcttccatacggataatttgagcttaagttttt-gtatgattgaattgtgaccttttttttctaag 3078062  T
Q  641 aaaaactattatttatacagatagg 665  Q
    |||||||| |||||||||| |||||    
T  3078063 aaaaactactatttatacaaatagg 3078087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 478 - 659
Target Start/End: Complemental strand, 1658764 - 1658583
Alignment:
Q  478 aaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgct 577  Q
    |||||||||||||||||||||||||| | |  ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||    
T  1658764 aaattgtaaagacatttaaagaaatgaacttgaattgtattgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttctctct 1658665  T
Q  578 tccatacggatattttgagtgtaagtttttagtatgattgaattgttac-ctctttttcctaagaaaaactattatttataca 659  Q
    ||||| |||||| ||||||||||||||||| ||||||| ||||||| || || |||| |||||| ||||||| | ||||||||    
T  1658664 tccatgcggataatttgagtgtaagttttt-gtatgatagaattgtgacacttttttccctaaggaaaactactgtttataca 1658583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 18108824 - 18108683
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  18108824 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 18108725  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  18108724 tgacccttttttcctaagaaaaactactatttatacagatag 18108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 492 - 659
Target Start/End: Original strand, 13277189 - 13277357
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt 591  Q
    ||||||||| ||||||||| ||| |  |||| |||| || ||||| ||||||||||||  |||||||| ||||||||||| ||||||||||||||| | |    
T  13277189 tttaaagaactgtattgaatttgtaaagatttaatgaaaattggtgcacatattcatactttgcaactcgtgactcgtttgtcgcttccatacggacagt 13277288  T
Q  592 -ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
     |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  13277289 attgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttataca 13277357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 14775522 - 14775624
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14775522 ggcgtgccaatttgtttacactaaaatttggtaaacaatcgctgatttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 14775621  T
Q  328 ttt 330  Q
    |||    
T  14775622 ttt 14775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 492 - 659
Target Start/End: Original strand, 13292567 - 13292735
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt 591  Q
    ||||||||| ||||||||| ||| |  |||| |||| || ||||| ||||||||||||  |||||||| ||||||||||| ||||||||||||||| | |    
T  13292567 tttaaagaactgtattgaatttgtaaagatttaatgaaaattggtgcacatattcatactttgcaactcgtgactcgtttgtcgcttccatacggacagt 13292666  T
Q  592 -ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
     |||||||||||||||||||||||||||||||| || | ||||||||||||||||||| ||||||||||    
T  13292667 attgagtgtaagtttttagtatgattgaattgtgacatgtttttcctaagaaaaactactatttataca 13292735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 476 - 659
Target Start/End: Complemental strand, 10267402 - 10267220
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||| ||||||||||||  ||||| | | ||| |||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||| ||     
T  10267402 gtaaattgcaaagacatttaagaaaatgaacttaaagtgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgattcgtttctct 10267303  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||||| | ||| ||||| | || | ||||||| ||||||||||    
T  10267302 cttccatgcggataatttgagtgtaagttttt-gtatgattgaattttgaccacttttccttagggaaaactactatttataca 10267220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 655
Target Start/End: Original strand, 14714096 - 14714278
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  14714096 aagtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 14714195  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattattta 655  Q
    |||||||||||||| | | || ||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| ||||||    
T  14714196 cgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattta 14714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 655
Target Start/End: Original strand, 14775776 - 14775958
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  14775776 aagtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 14775875  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattattta 655  Q
    |||||||||||||| | | || ||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| ||||||    
T  14775876 cgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattta 14775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 476 - 664
Target Start/End: Original strand, 18566961 - 18567147
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||| ||||||||||||  ||||| | | ||| || |||| |||||||||| |||||||||||||||||  ||||||||||||||||||||| ||     
T  18566961 gtaaattgcaaagacatttaagaaaatgaacttaaagtgtattgtttgaatgtaaattggtacacatattcattcattgcaacttgtgactcgtttctct 18567060  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| ||| || ||||||||||||||||| ||||||| ||||||| |||| ||||| ||| | ||||||| |||||||||| ||||    
T  18567061 cttccatgcgggtaatttgagtgtaagttttt-gtatgatagaattgtgacct-ttttttctagggaaaactactatttatacaaatag 18567147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 14713854 - 14713944
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14713854 tgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 14713944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 14556930 - 14557071
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||| | |||| |||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||| ||||||||||||||||||||    
T  14556930 aatgaaagttgatgcacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgattgaattg 14557029  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||| ||||| ||||||||||||| |||||||||| ||||    
T  14557030 tgacctgttttttctaagaaaaactactatttatacaaatag 14557071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 15153618 - 15153759
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||| |||| |||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||| ||||||||||||| ||||||    
T  15153618 aatgaaagttggtgcacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgatcgaattg 15153717  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||| ||||| ||||||||||||| |||||||||| ||||    
T  15153718 tgacctgttttttctaagaaaaactactatttatacaaatag 15153759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 462 - 637
Target Start/End: Original strand, 31079701 - 31079877
Alignment:
Q  462 ctcaaaataaacaagtaaattgtaaagacatttaaagaaa-tgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaactt 560  Q
    ||||||| ||||||| ||  | |||||||||||||| ||| || | | ||||||||||||| |||| ||  ||||||||||| |||| | ||||||| ||    
T  31079701 ctcaaaagaaacaagaaagctctaaagacatttaaaaaaaatgaacttaaattgcattgatcgaatatagattggtacacatgttcacacattgcaattt 31079800  T
Q  561 gtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcct 637  Q
    ||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  31079801 gtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgacccctttttcct 31079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 13292298 - 13292397
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13292298 gtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 13292397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 15153312 - 15153414
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  15153312 ggcgtgccaatttgtttacactgatttttggtaaacaaccgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 15153411  T
Q  328 ttt 330  Q
    |||    
T  15153412 ttt 15153414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 466 - 657
Target Start/End: Original strand, 49526408 - 49526601
Alignment:
Q  466 aaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgac 565  Q
    |||||||||||||||||| ||||||| ||||  |||   | | |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  49526408 aaataaacaagtaaattgcaaagacaattaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgac 49526507  T
Q  566 tcgtttatcgc-ttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaa-gaaaaactattatttata 657  Q
    |||||| || | ||  || |||||| ||||| ||||||||||  ||||||||| ||||| |||  |||| ||||| ||||||||| ||||||||    
T  49526508 tcgtttctctctttgaatgcggatagtttgattgtaagttttgtgtatgattggattgtcaccctttttccctaaggaaaaactactatttata 49526601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 13276973 - 13277049
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13276973 tttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 13277049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 18109142 - 18109046
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattg 324  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  18109142 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattg 18109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 18566716 - 18566820
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | ||  ||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||  ||||||||| |    
T  18566716 ggcgtgccaatttgtttacactgaatattggtaaacaaccgctggtttaaaaatatttacttgcaagatcaatcagtaaatcttaaggacatattgtgtt 18566815  T
Q  329 ttgtt 333  Q
    |||||    
T  18566816 ttgtt 18566820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 50687684 - 50687535
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||| ||||||||||| ||||||||||| |||||| |||  |||||||||||||||| || |||  || ||||||   ||||||||||||||      
T  50687684 aaattgcatttattgaatgtaaattggtacacatgttcatacattataacttgtgactcgtttgtctcttgaatgcggatagcctgagtgtaagttttgt 50687585  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |||||||||  |||| |||  ||||||||| |||||| ||||||||||||    
T  50687584 gtatgattggtttgtgacccgtttttcctatgaaaaaatattatttatac 50687535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 31079479 - 31079562
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaag 315  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||| ||||| || |||||||||||||||||||||| ||||||    
T  31079479 gtgccaatttgtttacactaaaatttgataaacaatcgttggtttaaaaatattaacttgcaagatcaaccagtaaaccttaag 31079562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 571
Target Start/End: Original strand, 27812260 - 27812364
Alignment:
Q  466 aaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgac 565  Q
    |||| ||||||||||||| || || |||||||| |||  | | |||||||||  ||||||||||| |||||| ||||||||||| |||||||||||||||    
T  27812260 aaatgaacaagtaaattgcaagga-atttaaaggaataaacttaaattgcataaattgaatgtaaattggtagacatattcatacattgcaacttgtgac 27812358  T
Q  566 tcgttt 571  Q
    | ||||    
T  27812359 ttgttt 27812364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 584 - 658
Target Start/End: Original strand, 27812391 - 27812465
Alignment:
Q  584 cggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |||||| ||||||||||||||||  ||||||||||||||| |||  |||||| |  |||||||||||||||||||    
T  27812391 cggataatttgagtgtaagttttctgtatgattgaattgtgacccgtttttcatgtgaaaaactattatttatac 27812465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 24779117 - 24779194
Alignment:
Q  170 aaaccattttttatgcatacaaaatgttgggtcgcgcaaaacttgaaatggttctacttggcgtgccaatttgtttac 247  Q
    ||||||||||||||||||| ||| |||||||||| |||||| |||||||| | | ||  |||||||||||||| ||||    
T  24779117 aaaccattttttatgcatataaagtgttgggtcgtgcaaaaattgaaatgttcccaccgggcgtgccaatttgattac 24779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 50687926 - 50687867
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaa 314  Q
    |||||||||||  ||||| ||| ||| |  ||||||||||||||||||||||||||||||    
T  50687926 tttggtaaacagccgctgatttaaaattagttacttgcaagatcaaccagtaaatcttaa 50687867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 260; Significance: 1e-144; HSPs: 10)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 229 - 604
Target Start/End: Complemental strand, 116830 - 116456
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  116830 ggcgtgccaatttgtttacactgaaatttggtaaacagtcgttggtttcaaaatgtttacttgcaagatcaaccggtaaatcttaagagcatattgtgct 116731  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaat 428  Q
    || ||| ||| |    | |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||  |||||||||||||    
T  116730 ttatttgtctctttggaattgtgatgtttgttcttgaagaacattgataaaaacaagaataaataaaagg-caatcgaatccaaccaagttgaatccaat 116632  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
     |||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  116631 cgaagtatggtgcgaacgaaagtaaatgaattactcaaaataaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgactgaatgt 116532  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtt 604  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  116531 aagttggtacacatattcatacattgcaacttgtgactcgttcatcgcttccatacagatattttgagcgtaagtt 116456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 232 - 678
Target Start/End: Original strand, 6367 - 6813
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  6367 gtgccaatttgtttagactgaaatttggtaaacaatcgctggtttcaaagatgttcacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 6466  T
Q  331 gtttatcttt--caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaat 428  Q
      ||||||||  || | ||    ||  |||||||| ||||||||||| |||| |||||| |||  ||||   |||||||| |||| ||||||||||||||    
T  6467 tattatctttttcacacgta---atacttgttcttaaagaactttgaaaaaaacaagaacaaaataaagat-aatcgaattcaacccagttgaatccaat 6562  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
     ||||| || ||||| ||| || |||  || |||| |||||    |||||||||| |||||  ||||||||||||||||||||||| || || | ||||     
T  6563 cgaagtttggtgcgactgacagtaaagaaaatacttaaaatgcttaagtaaattgcaaagatgtttaaagaaatgtattgaaattgtatagacttaatga 6662  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacc 627  Q
    || ||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||| ||||||||||||||| | |    
T  6663 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgatc 6762  T
Q  628 tctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
     |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  6763 cctttttcctaagaaaaactactatttatacaaataggataataactacct 6813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 404 - 678
Target Start/End: Complemental strand, 22869 - 22594
Alignment:
Q  404 cgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatg 503  Q
    |||||||||| |||||||||||||| ||||| || ||||||||| || |||  || |||| ||||| |  |||||||||| |||||  ||||||||||||    
T  22869 cgaatccaacccagttgaatccaatcgaagtttggtgcgaatgacagtaaagaaaatacttaaaatgattaagtaaattgcaaagatgtttaaagaaatg 22770  T
Q  504 tattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaag 602  Q
    ||||||||||  || || | |||| || ||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||    
T  22769 tattgaaattaaatagacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaag 22670  T
Q  603 tttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    ||||||||||||| ||||| | |||  ||||||||||||||||||| |||||| ||| ||||| ||||||||||||    
T  22669 tttttagtatgatcgaattatgacccgtttttcctaagaaaaactactatttacacaaataggataataactacct 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 475 - 664
Target Start/End: Complemental strand, 62324 - 62134
Alignment:
Q  475 agtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatc 574  Q
    ||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||||||||||||| |||||| ||    
T  62324 agtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgattcgtttgtc 62225  T
Q  575 gcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  62224 gcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 62134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 475 - 664
Target Start/End: Complemental strand, 71502 - 71312
Alignment:
Q  475 agtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatc 574  Q
    ||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||||||||||||| |||||| ||    
T  71502 agtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgattcgtttgtc 71403  T
Q  575 gcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  71402 gcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 71312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 475 - 664
Target Start/End: Complemental strand, 85185 - 84995
Alignment:
Q  475 agtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatc 574  Q
    ||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| ||    
T  85185 agtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatggaaattggtgcacatattcatactttgcaacttgtgactcgtttgtc 85086  T
Q  575 gcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||| | | ||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  85085 gcttccatacggacagtattgagtgtaagttcttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 84995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 62578 - 62480
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||| | |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  62578 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 62480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 71756 - 71658
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||| | |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  71756 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 71658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 39126 - 39026
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    |||||||| | |||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  39126 tgtttacactgaaatttggtaaacattcgctggtttcaaaaatgttgacttgcatgatcaaccagtaaatcttaagagcatattgtgcttttattatctt 39027  T
Q  340 t 340  Q
    |    
T  39026 t 39026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 259 - 330
Target Start/End: Complemental strand, 85409 - 85337
Alignment:
Q  259 gtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  85409 gtaaacaatcgctggtttcaaaaatgtttacttgcaagatcaactagtaaatcttaggagcatattgtgcttt 85337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 225; Significance: 1e-123; HSPs: 3)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 241 - 749
Target Start/End: Original strand, 16710 - 17221
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatct- 338  Q
    |||||||| | ||||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  16710 tgtttacactgaaatttggtaaacaatcactggtttaaaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttgttatctc 16809  T
Q  339 ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatccaattgaagtat 436  Q
    ||  |||   | || | ||||||||||||||||||  ||||| ||||||||||  ||||| ||||||||||||||||   ||||||||||||  |||| |    
T  16810 ttttaaac--gcgacgcttgttcttgaagaactttactaaaaacaagaataaacataaaaaggcaatcgaatccaaccttgttgaatccaatcaaagttt 16907  T
Q  437 gatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggt 536  Q
    ||||||||| |||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16908 gatgcgaataaaagtaaatgaattacttaaaatgaacaagtaaattgcaaagacatttaaagaaatgtagtgaaattgcattgattgaatgtaagttggt 17007  T
Q  537 acacatattcatatattgcaacttgtgactcgtttatcgcttccatacgga-tattttgagtgtaagtttttagtatgattgaattgttacctctttttc 635  Q
     ||||| |||||| ||||||||||||||||||||| ||||||||||||| |  || ||||| | |||||||||||||||||||||||| |||  |||||     
T  17008 gcacatgttcatacattgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagcgcaagtttttagtatgattgaattgtgacccttttttt 17107  T
Q  636 ctaagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatcctagccatacgatctaaata 734  Q
    ||||||||||||| | |||||||| |||||| ||||| ||||| | || || ||||||||| ||| |||||||||||||| ||| ||| | || | ||||    
T  17108 ctaagaaaaactactctttatacaaatagggaaataattacctagttttaacactataactgcag-aaaactacctaatcatagtcattcaatttgaata 17206  T
Q  735 tcgaatatagccgtt 749  Q
    |||||||||||||||    
T  17207 tcgaatatagccgtt 17221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 327 - 261
Alignment:
Q  259 gtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| ||||||| | |||||  |||||||||||||||||||| ||||||| | |||||||||||    
T  327 gtaaacaaccgctggtctaaaaatagttacttgcaagatcaaccagaaaatctt-atagcatattgtg 261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 584 - 657
Target Start/End: Complemental strand, 5615 - 5542
Alignment:
Q  584 cggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttata 657  Q
    |||||| ||||||||||||||||   |||||||||||||| |||  |||||| || ||||||||| ||| ||||    
T  5615 cggatagtttgagtgtaagttttctatatgattgaattgtgacccgtttttcatatgaaaaactactatctata 5542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 223; Significance: 1e-122; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 229 - 768
Target Start/End: Original strand, 11989103 - 11989643
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11989103 ggcgtgccaatttgtttacactgaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 11989202  T
Q  329 ttgtttatct-ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa--taaaagggcaatcgaatccaactcagttgaatcc 425  Q
    ||  |||||| ||   ||   ||||   ||||| ||||||| |||||||| || ||||||||||  |||||| | ||||||||||||| |||||||||||    
T  11989203 tttgttatctcttttgaac--gtgacacttgtttttgaagatctttgatagaaacaagaataaaaataaaagag-aatcgaatccaacccagttgaatcc 11989299  T
Q  426 aattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaa 525  Q
    ||| ||||| |||||| ||| | || |||  ||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  11989300 aatcgaagtttgatgcaaataacagtaaagaaattacttaaaatgaataagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgactgaa 11989399  T
Q  526 tgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgtt 624  Q
    |  | |||||| ||||  |||||| |||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  11989400 taaaggttggtgcacacgttcatacattgcaacttatgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtg 11989499  T
Q  625 acctctttttcctaagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatcctagccata 723  Q
    |||  ||||||||||||||||||| |||||||||| | |||| |||||||| || | || ||   || ||||  || |||||||  ||||| |||||||     
T  11989500 acccttttttcctaagaaaaactactatttatacaaacagggaaataactatctagttttaacgttaaaactgtag-aaaactatataatcatagccatt 11989598  T
Q  724 cgatctaaatatcgaatatagccgttggaacacttgaccttatcc 768  Q
    |||| | |||||||||||||||||||  |||| ||||||||||||    
T  11989599 cgatttgaatatcgaatatagccgttacaacatttgaccttatcc 11989643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 252 - 664
Target Start/End: Complemental strand, 18753049 - 18752644
Alignment:
Q  252 aaatttggtaaacaatcgctggtttcaaaatg-tttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgt 350  Q
    |||||||||||||||||| |||||| |||||  |||||||||||||||||| ||||||||||||||||   ||||||||  |||||||||| ||| ||||    
T  18753049 aaatttggtaaacaatcggtggtttaaaaattatttacttgcaagatcaactagtaaatcttaagagc---ttgtgctta-tttatctttcgaaaattgt 18752954  T
Q  351 gatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaag 450  Q
    ||| || ||||||||||||||| ||| |||  || | ||| ||||||| ||||||||| |||| |||||||||||||| ||| |||||||| ||| ||||    
T  18752953 gatattcgttcttgaagaactt-gatgaaaataaaattaagtaaaagg-caatcgaattcaacccagttgaatccaatcgaaatatgatgcaaataaaag 18752856  T
Q  451 caaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatat 550  Q
     ||||||||||||||||| |||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| |||||||     
T  18752855 taaatgaattactcaaaagaaacaagtaaattgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatac 18752756  T
Q  551 attgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactatt 650  Q
    ||||||||||||||||| ||| ||| ||||||||||||| |||||| |||||||||  ||||||||||||||| |||  |||||||||| ||||| || |    
T  18752755 attgcaacttgtgactcatttctcgattccatacggataatttgagcgtaagtttt--gtatgattgaattgtgacccttttttcctaaaaaaaattact 18752658  T
Q  651 atttatacagatag 664  Q
    ||||||||| ||||    
T  18752657 atttatacaaatag 18752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 229 - 664
Target Start/End: Complemental strand, 15758992 - 15758552
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  15758992 ggcgtgccaatttatttacaccgaaatttggtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatcttgtgc 15758893  T
Q  328 tttgt-ttatct--ttcaaaagttgtgatgtttgttcttgaagaactttgat-aaaagcaagaataaataaaagggcaatcgaatccaactcagttgaat 423  Q
    ||| | ||||    ||||||| | || ||  |||||||| |||||| ||| | ||||  ||||  ||||| ||   ||||||||||||||||| ||||||    
T  15758892 tttttattattcgcttcaaaaat-gtaataattgttcttaaagaaccttggttaaaatgaagataaaatacaaa--caatcgaatccaactcaattgaat 15758796  T
Q  424 ccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaac--aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgat 521  Q
     |||| ||||| |  ||  ||| | || |||  || |||| |||  |  |  |||||||||| |||||  |||||||| ||||||| |||||| |  ||     
T  15758795 tcaatcgaagtttagtgtaaataacagtaaagaaaatacttaaagaatgcttaagtaaattgaaaagatgtttaaagacatgtattaaaattgtaaagac 15758696  T
Q  522 tgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaat 620  Q
    | |||| || ||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||    
T  15758695 ttaatgaaatttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaat 15758596  T
Q  621 tgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||| |||||||||||||||||||||||| |||||||||||||||    
T  15758595 tgtgacctctttttcctaagaaaaactactatttatacagatag 15758552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 463 - 664
Target Start/End: Original strand, 40342794 - 40342995
Alignment:
Q  463 tcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgt 562  Q
    |||||| |||||||||||||| ||||||||||||  |||   | | |||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  40342794 tcaaaagaaacaagtaaattgcaaagacatttaagaaaacaaacttaaattgcattgattaaatgtaaattggtacacatgttcatacattgcaacttgt 40342893  T
Q  563 gactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagat 662  Q
    ||||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| ||| |||||   |||| ||||||| |||||||||| ||    
T  40342894 gactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccacttttcattaaggaaaactactatttatacaaat 40342993  T
Q  663 ag 664  Q
    ||    
T  40342994 ag 40342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 455 - 664
Target Start/End: Original strand, 10827729 - 10827940
Alignment:
Q  455 tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattg 554  Q
    |||||| ||||||| ||||||||||||||||||||||||||   ||||| | | |||||||||||||||||||| | |||||||||| ||||||| ||||    
T  10827729 tgaattgctcaaaagaaacaagtaaattgtaaagacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattcatacattg 10827828  T
Q  555 caacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcc--taagaaaaactattat 652  Q
    ||||||||||||||||| || ||||||| |||||| ||||||||||||||||  ||||||||| | ||| |||  |||||||  || | ||||||| |||    
T  10827829 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaactactat 10827928  T
Q  653 ttatacagatag 664  Q
    ||||||| ||||    
T  10827929 ttatacaaatag 10827940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 455 - 664
Target Start/End: Original strand, 11021521 - 11021732
Alignment:
Q  455 tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattg 554  Q
    |||||| ||||||| ||||||||||||||||||||||||||   ||||| | | |||||||||||||||||||| | |||||||||| ||||||| ||||    
T  11021521 tgaattgctcaaaagaaacaagtaaattgtaaagacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattcatacattg 11021620  T
Q  555 caacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcc--taagaaaaactattat 652  Q
    ||||||||||||||||| || ||||||| |||||| ||||||||||||||||  ||||||||| | ||| |||  |||||||  || | ||||||| |||    
T  11021621 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaactactat 11021720  T
Q  653 ttatacagatag 664  Q
    ||||||| ||||    
T  11021721 ttatacaaatag 11021732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 44277669 - 44277810
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||| |||||||    
T  44277669 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattg 44277768  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||| ||||||||||||| |||||||||||||||    
T  44277769 tgacccattttttctaagaaaaactactatttatacagatag 44277810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 14035878 - 14036011
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | ||||||||||||||||||||||||||| |||| |||  |    
T  14035878 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgaccctt 14035977  T
Q  631 ttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||||||| |||||||||||||||    
T  14035978 ttttcctaagaaaaactactatttatacagatag 14036011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 14323707 - 14323848
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||| |||||||||||||| |||    
T  14323707 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgagttg 14323806  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  14323807 tgacccttttttcctaagaaaaactactatttatacagatag 14323848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 14345908 - 14346041
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | ||||||||||||||||||||||||||| |||| |||  |    
T  14345908 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgaccctt 14346007  T
Q  631 ttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||||||| |||||||||||||||    
T  14346008 ttttcctaagaaaaactactatttatacagatag 14346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 18141794 - 18141934
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||||    
T  18141794 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttt-agtatgattgaattg 18141892  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  18141893 tgacccttttttcctaagaaaaactactatttatacagatag 18141934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 524 - 663
Target Start/End: Original strand, 18174864 - 18175004
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| |||||  || ||||| | | |||||||||||||||||||||||||||||||    
T  18174864 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgctctcacacggacagtattgagtgtaagtttttagtatgattgaattg 18174963  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagata 663  Q
    | |||  ||||||||||||||||||| ||||||||||||||    
T  18174964 tgacccgtttttcctaagaaaaactactatttatacagata 18175004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 238 - 330
Target Start/End: Original strand, 1977946 - 1978039
Alignment:
Q  238 atttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1977946 atttgtttacactaaaatttggtaaacaatcgctagtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 1978039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 474 - 678
Target Start/End: Original strand, 1978171 - 1978376
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||| ||||| |  || | || | || ||||||||||| ||||||  |||||||||||||||||||| |    
T  1978171 aagtaaattgcaaagatgtttaaagaaatgtattggaattgtaaagacttaacgaaatttggtacacatgttcatactttgcaacttgtgactcgtttgt 1978270  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataa 672  Q
    ||||| |||||||| | | |||||||||| |||| |||||||||||||||| |||  |||| |||||||||||||| |||||||||| ||||  | ||||    
T  1978271 cgctttcatacggacaatattgagtgtaaattttgagtatgattgaattgtgacccgttttccctaagaaaaactactatttatacaaatagacttataa 1978370  T
Q  673 ctacct 678  Q
    ||||||    
T  1978371 ctacct 1978376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 18115226 - 18115366
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| || |||||||||||| | | ||||||||||||||| |||||||||||||||    
T  18115226 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcacttccatacggacagtattgagtgtaagtttt-agtatgattgaattg 18115324  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  18115325 tgacccttttttcctaagaaaaactactatttatacagatag 18115366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 18174564 - 18174666
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  18174564 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 18174663  T
Q  328 ttt 330  Q
    |||    
T  18174664 ttt 18174666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 524 - 623
Target Start/End: Original strand, 18160094 - 18160194
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  18160094 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 18160193  T
Q  623 t 623  Q
    |    
T  18160194 t 18160194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 455 - 582
Target Start/End: Complemental strand, 10864314 - 10864187
Alignment:
Q  455 tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattg 554  Q
    |||||| ||||||| ||||||||||||||||| ||||||||   ||||| | | |||||||||||||||||||| | |||||||||| ||||||| ||||    
T  10864314 tgaattgctcaaaagaaacaagtaaattgtaaggacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattcatacattg 10864215  T
Q  555 caacttgtgactcgtttatcgcttccat 582  Q
    ||||||||||||||||| || |||||||    
T  10864214 caacttgtgactcgtttctctcttccat 10864187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 14035555 - 14035649
Alignment:
Q  233 tgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14035555 tgccaatttgtttacactgatatttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 14035649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 14345585 - 14345679
Alignment:
Q  233 tgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14345585 tgccaatttgtttacactgatatttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 14345679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 18141475 - 18141573
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18141475 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgttaacttgcaagatcaaccagtaaatcttaggagcatattgtg 18141573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 18159804 - 18159880
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18159804 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 18159880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 553 - 664
Target Start/End: Original strand, 24876397 - 24876509
Alignment:
Q  553 tgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgtta-cctctttttcctaagaaaaactatta 651  Q
    ||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| | ||| ||||||||| | ||||||| ||    
T  24876397 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttttcctagggaaaactacta 24876496  T
Q  652 tttatacagatag 664  Q
    |||||||| ||||    
T  24876497 tttatacaaatag 24876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 471 - 658
Target Start/End: Original strand, 41239173 - 41239358
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtt 570  Q
    ||||||||||||| || || ||||||||||||  |   |||||||||||||| ||||||| |||||||||| ||||||| ||||  |||||| |||||||    
T  41239173 aacaagtaaattgcaatgaaatttaaagaaataaacgtaaattgcattgattaaatgtaaattggtacacagattcatacattgtgacttgttactcgtt 41239272  T
Q  571 tatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    | || | |  || |||||| |||||| |||||||||  ||||||||||||||| ||| |||||| ||| ||||||||| |||||||||    
T  41239273 tctctc-tgaatccggatagtttgagcgtaagttttatgtatgattgaattgtgacc-cttttttctatgaaaaactagtatttatac 41239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 10864519 - 10864434
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  10864519 tgtttacactgaaatttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtg 10864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 14323414 - 14323486
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14323414 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 14323486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 10827523 - 10827608
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | ||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  10827523 tgtttacactgaaatttggtaaacaaccgctagtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtg 10827608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 11021315 - 11021400
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | ||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  11021315 tgtttacactgaaatttggtaaacaaccgctagtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtg 11021400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 18114933 - 18115005
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18114933 tttggtaaacaatcgctggtttcaatgatgttaacttgcaagatcaaccagtaaatcttaggagcatattgtg 18115005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 16712994 - 16713076
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatct 311  Q
    ||||||||||||||||||| ||    |||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  16712994 ggcgtgccaatttgtttaccttgggttttggtaaacaatcgctggtttaaaaatagttacttgcaagatcaaccagtaaatct 16713076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 17687230 - 17687312
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatct 311  Q
    ||||||||||||||||||| ||    |||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  17687230 ggcgtgccaatttgtttaccttgggttttggtaaacaatcgctggtttaaaaatagttacttgcaagatcaaccagtaaatct 17687312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 44277378 - 44277454
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||| | |||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  44277378 tttggtaaacaattgttggtttcaatgatgtttacttgcaagaccaaccagtaaatcttaggagcatattgtgcttt 44277454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 40342581 - 40342667
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||| |  |||||||||||| ||||| ||| ||||| |||||||| ||||||||||||||||||||| |  |||||||||    
T  40342581 ttgtttacattgatttttggtaaacaaccgctgatttaaaaatatttacttgtaagatcaaccagtaaatcttagggacatattgtg 40342667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 18450928 - 18450780
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||  |||||||||| ||||||| |||   |||||| |||||||| || | |  || || ||| ||| ||||||||||||      
T  18450928 aaattgcattgattgaatgtacattggtacacaaattcatacattatgacttgttactcgtttctctc-taaatgcgaatagtttaagtgtaagttttct 18450830  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||| ||||||||| |||| ||||||| | |  |||||| |||||||||    
T  18450829 gtatggttgaattgtgacctgtttttcccatgggaaactaatatttatac 18450780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 648
Target Start/End: Original strand, 16713223 - 16713397
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtt 570  Q
    ||||||||||||| || || |||||||| |||  | | |||||||||  ||||||||||| |||||||||||||||||| || |  |||| | |||||||    
T  16713223 aacaagtaaattgcaagga-atttaaaggaataaacttaaattgcataaattgaatgtaaattggtacacatattcatacatcgtgacttattactcgtt 16713321  T
Q  571 tatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaacta 648  Q
    | || | |  || | |||| |||||||||| |||||  ||||||||||||||| ||| ||||||  || |||||||||    
T  16713322 tctctc-tgaatgcagatagtttgagtgtacgttttctgtatgattgaattgtgacc-ctttttggtatgaaaaacta 16713397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 648
Target Start/End: Original strand, 17687459 - 17687633
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtt 570  Q
    ||||||||||||| || || |||||||| |||  | | |||||||||  ||||||||||| |||||||||||||||||| || |  |||| | |||||||    
T  17687459 aacaagtaaattgcaagga-atttaaaggaataaacttaaattgcataaattgaatgtaaattggtacacatattcatacatcgtgacttattactcgtt 17687557  T
Q  571 tatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaacta 648  Q
    | || | |  || | |||| |||||||||| |||||  ||||||||||||||| ||| ||||||  || |||||||||    
T  17687558 tctctc-tgaatgcagatagtttgagtgtacgttttctgtatgattgaattgtgacc-ctttttggtatgaaaaacta 17687633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 18451168 - 18451111
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctt 312  Q
    ||||| |||||||||||| ||| ||| |  ||||||| ||||||||||||||||||||    
T  18451168 tttggcaaacaatcgctgttttaaaattaattacttgtaagatcaaccagtaaatctt 18451111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 220; Significance: 1e-120; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 241 - 664
Target Start/End: Complemental strand, 200531 - 200111
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||     
T  200531 tgtttacactgaaatttggtaaataatcgttggtttcaaaatgtttacttgcaagatcaacccgtaaatcttaagagcatattgtgcttaatttatcttc 200432  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatg 440  Q
    |  || |||||||||| ||||||||||||||| ||| | |  |||||||| ||||||| ||||||||| ||||  |||||||||||||  ||||||||||    
T  200431 cgtaaattgtgatgttcgttcttgaagaactt-gatgagaataagaataagtaaaagg-caatcgaattcaacctagttgaatccaatcaaagtatgatg 200334  T
Q  441 cgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacac 540  Q
    | ||| |||| ||||||||||||||||| |||||||||||||| |||||| |||||||||||| | | ||||||||||||| |||| |||||||||||||    
T  200333 caaataaaagtaaatgaattactcaaaagaaacaagtaaattgcaaagacgtttaaagaaatgaacttaaattgcattgatcgaatataagttggtacac 200234  T
Q  541 atattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaag 640  Q
    | ||||||| ||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  200233 agattcatacattgcaacttgtgactcatttctcgcttccataaggataatttgagtgtaagttttt-gtatgattgaattgtgacccttttttcctaag 200135  T
Q  641 aaaaactattatttatacagatag 664  Q
    |||||| | |||||||||| ||||    
T  200134 aaaaacaactatttatacaaatag 200111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 120624 - 120700
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  120624 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttagaagcatattgtgcttt 120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 127496 - 127538
Alignment:
Q  288 cttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  127496 cttgcaagatcaaccagtaaatcttagaagcatattgtgcttt 127538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 232 - 749
Target Start/End: Original strand, 44956 - 45461
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||              |||||||||||||||||||    
T  44956 gtgccaatttgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgttcacttgcaagat--------------taagagcatattgtgcttt 45041  T
Q  331 gtttatct-ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaata-aaagggcaatcgaatccaactcagttgaatccaat 428  Q
      |||||| ||  |||   |||| | |||||||||||||||||| |||||| |||||||||| | ||| ||||||||||||| || ||||||||||||||    
T  45042 tgttatctcttttaaac--gtgacgcttgttcttgaagaactttaataaaaacaagaataaaaataaaaggcaatcgaatcctacccagttgaatccaat 45139  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
      || | |||||||||| |||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45140 caaattttgatgcgaataaaagtaaatgaattactaaaaatgaacaagtaaattgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 45239  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacgga-tattttgagtgtaagtttttagtatgattgaattgttacc 627  Q
    |||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||  || ||||| |||||||||||||||||||||||||| |||    
T  45240 aagttggtgcacatattcatacattgcaacttgtgactcgtttgccgcttccatacggacaatattgagcgtaagtttttagtatgattgaattgtgacc 45339  T
Q  628 tctttttcctaagaaaaactattatttatacagatagggtaataactaccttg-ttgaaaactataactacagaaaaactacctaatcctagccatacga 726  Q
      ||||||||||||||||||| |||||||||| |||||||||| ||||||| | || || ||||||||| ||| |||||||||||||| ||| |||   |    
T  45340 cttttttcctaagaaaaactactatttatacaaatagggtaatgactacctagttttaacactataactgcag-aaaactacctaatcatagtcattaaa 45438  T
Q  727 tctaaatatcgaatatagccgtt 749  Q
    | | ||||| |||||||||||||    
T  45439 tttgaatattgaatatagccgtt 45461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 206; Significance: 1e-112; HSPs: 5)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 232 - 557
Target Start/End: Complemental strand, 145026 - 144702
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttg 331  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  145026 gtgccaatttgtttacactgaaatttggtaaacaatcgctggtttcaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttta 144927  T
Q  332 tttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattga 431  Q
    |||||||||| |||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| ||||||||| |||| ||    
T  144926 tttatctttcgaaagttatgatgttcgttcttgaagaactttggtaaaaacaagaataaataaaa-gacaatcgaattcaacccagttgaatacaatcga 144828  T
Q  432 agtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaag 531  Q
    |||||||||||||| ||||  ||| ||||||||||||||||||||||||||| ||||||||||| ||||||| | | |||||||||||| ||||||||||    
T  144827 agtatgatgcgaataaaagtgaataaattactcaaaataaacaagtaaattgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaag 144728  T
Q  532 ttggtacacatattcatatattgcaa 557  Q
    ||| || ||| ||||||| |||||||    
T  144727 ttgatatacagattcatacattgcaa 144702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 232 - 557
Target Start/End: Complemental strand, 130195 - 129871
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttg 331  Q
    ||||||||||||| ||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  130195 gtgccaatttgttaacactgaaatttggtaaacaatcgcaggtttcaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttta 130096  T
Q  332 tttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattga 431  Q
    |||||||||| ||| || ||||||| ||||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| ||||||||| |||| ||    
T  130095 tttatctttcgaaatttatgatgttcgttcttgaagaactttggtaaaaacaagaataaataaaa-gacaatcgaattcaacccagttgaatacaatcga 129997  T
Q  432 agtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaag 531  Q
    |||||||||||||| ||||  ||| ||||||||||||||||||||||||||| ||||||||||| ||||||| | | |||||||||||| ||||||||||    
T  129996 agtatgatgcgaataaaagtgaataaattactcaaaataaacaagtaaattgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaag 129897  T
Q  532 ttggtacacatattcatatattgcaa 557  Q
    ||| || ||| ||||||| |||||||    
T  129896 ttgatatacaaattcatacattgcaa 129871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 230 - 557
Target Start/End: Complemental strand, 136314 - 135989
Alignment:
Q  230 gcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctt 329  Q
    ||||||||||||||| ||| | |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  136314 gcgtgccaatttgtt-acactgaaatttggtaaataatcgttggtttcaaaatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgctt 136216  T
Q  330 tgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaatt 429  Q
    | |||||||||  | |||| ||||||| ||||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| ||||||||| ||||     
T  136215 tatttatcttttgagagttatgatgttcgttcttgaagaactttggtaaaaacaagaataaataaaa-gacaatcgaattcaacccagttgaatacaatc 136117  T
Q  430 gaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgta 529  Q
    ||||||||||| |||| ||||  ||| ||||||||||||||||||||||||||| ||||||||||| ||||||| | | |||||||||||| ||||||||    
T  136116 gaagtatgatgtgaataaaagtgaataaattactcaaaataaacaagtaaattgcaaagacatttagagaaatgaacttaaattgcattgactgaatgta 136017  T
Q  530 agttggtacacatattcatatattgcaa 557  Q
    ||||| || ||  ||||||| |||||||    
T  136016 agttgatatactgattcatacattgcaa 135989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 416 - 918
Target Start/End: Complemental strand, 107655 - 107153
Alignment:
Q  416 agttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgc 515  Q
    ||||||||||||| |||||||||||||||| ||||  ||| |||||||||||||||||||| |||||| ||||||||||||||||||| | | |||||||    
T  107655 agttgaatccaatcgaagtatgatgcgaataaaagtgaataaattactcaaaataaacaagcaaattgcaaagacatttaaagaaatgaacttaaattgc 107556  T
Q  516 attgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgat 615  Q
    |||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||||||||||    
T  107555 attgacggaatgtaagttggtacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagtctgagcgtaagtttttagtatgat 107456  T
Q  616 tgaattgttacctctttttcctaaga-aaaactattatttatacagatagggtaataactaccttg-------ttgaaaactataactacagaaaaacta 707  Q
    |||||||| |||| |||||||||||| |||| || |||||||||| |||| | ||||||||||| |       || |||||||||||  ||| |||||||    
T  107455 tgaattgtgacctttttttcctaagaaaaaaatactatttatacaaatagag-aataactacctagtttgaaatttaaaactataaccgcag-aaaacta 107358  T
Q  708 cctaatcctagccatacgatctaaatatcgaatatagccgttggaacacttgaccttatccggataaaataactgc-tttcgagattcccctgctcatcg 806  Q
    ||||||| ||||||||||||     | |||||||||||| || || ||||||||| ||||   | |||||||| || |||||| || ||  ||| |||||    
T  107357 cctaatcttagccatacgat----ttgtcgaatatagccattcgagcacttgaccctatc--tagaaaataaccgcttttcgaaatccctttgcccatcg 107264  T
Q  807 aa-agaggcgcgtgtattcgattctcttctaaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcatta 905  Q
    ||  |||||||| || ||||||  ||||| ||||| |  |||||||||||| ||| ||| |||||||  ||||| ||||||||||| |||||   |||||    
T  107263 aacggaggcgcgcgtcttcgatcatcttccaaggaac--aacttcgatagagatgtaagatcaagtcccttccataaggtcaactcctttgatcacatta 107166  T
Q  906 aatgatacccttt 918  Q
    |||||| ||||||    
T  107165 aatgatgcccttt 107153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 457 - 659
Target Start/End: Complemental strand, 129358 - 129156
Alignment:
Q  457 aattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgca 556  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| | | |||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  129358 aattactcaaaataaacaagtaaattgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttgttacacagattcatacattgca 129259  T
Q  557 acttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttat 656  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  129258 acttgtgactcgtttatcgcttccataaggatagtttgagcgtaaatttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttat 129159  T
Q  657 aca 659  Q
    |||    
T  129158 aca 129156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 205; Significance: 1e-111; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 229 - 678
Target Start/End: Original strand, 927 - 1376
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  927 ggcgtgccaatttgtttacaatgaaatttggtaaacaatcactggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 1026  T
Q  328 tttgtttatc--tttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatcc 425  Q
    |||  |||||  ||||| | ||    |   |||||||| |||||||||||||||| ||||||||||  ||||   ||||||||||||| |||||||||||    
T  1027 ttttattatccttttcagacgta---acacttgttcttaaagaactttgataaaaacaagaataaaataaagat-aatcgaatccaacgcagttgaatcc 1122  T
Q  426 aattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaa 525  Q
    ||| ||||| || ||||||||| || |||  || |||| ||||| |  |||||||||| |||||  ||||||||||||||||||||||||||||| | ||    
T  1123 aatcgaagtttggtgcgaatgacagtaaagaaaatacttaaaatgattaagtaaattgcaaagatgtttaaagaaatgtattgaaattgcattgacttaa 1222  T
Q  526 tgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgtt 624  Q
    || || ||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | || |||||||||||||||||||||||||||||     
T  1223 tgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatttagtgtaagtttttagtatgattgaattgtg 1322  T
Q  625 acctctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  1323 acctgtttttcctaagaaaaactactatttatacaaataggataataactacct 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 415 - 678
Target Start/End: Original strand, 7540 - 7804
Alignment:
Q  415 cagttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattg 514  Q
    |||||||||||||| ||||| || ||||||||| || |||  || |||| ||||| |  |||||||||| |||||  |||||||||||||||||||||||    
T  7540 cagttgaatccaatcgaagtttggtgcgaatgacagtaaagaaaatacttaaaatgattaagtaaattgcaaagatgtttaaagaaatgtattgaaattg 7639  T
Q  515 cattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatg 613  Q
    |||||| | |||| || ||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | || |||||||||||||||||||    
T  7640 cattgacttaatgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatttagtgtaagtttttagtatg 7739  T
Q  614 attgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  7740 attgaattgtgacctgtttttcctaagaaaaactactatttatacaaataggataataactacct 7804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-104; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 241 - 678
Target Start/End: Original strand, 19405502 - 19405940
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatct- 338  Q
    |||||||| | ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  19405502 tgtttacactgaaatttggtaaacaatcactggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttattatctc 19405601  T
Q  339 -ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatg 437  Q
     |||| | ||   || | |||||||| |||| |||||||| || |||||||||| | || |  ||||||||||||| |||||||||||||| ||||| ||    
T  19405602 tttcagacgt---gacgcttgttcttaaagatctttgatagaaacaagaataaaaataaagagaatcgaatccaacccagttgaatccaatcgaagtttg 19405698  T
Q  438 atgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggta 537  Q
     ||| ||  | || |||  ||||||| ||||| || |||||||||| |||||   |||||||||||||||||||||||||||| | |||| ||||||||     
T  19405699 gtgcaaacaacagtaaagaaattacttaaaatgaataagtaaattgcaaagatgattaaagaaatgtattgaaattgcattgacttaatgaaagttggtg 19405798  T
Q  538 cacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcc 636  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  |||||||    
T  19405799 cacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcc 19405898  T
Q  637 taagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||||||||||| |||||||||| |||||| |||||||||||    
T  19405899 taagaaaaactactatttatacaaatagggaaataactacct 19405940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 229 - 664
Target Start/End: Original strand, 1557383 - 1557823
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  1557383 ggcgtgccaatttatttacaccgaaatttggtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatcttgtgc 1557482  T
Q  328 tttgt-ttatct--ttcaaaagttgtgatgtttgttcttgaagaactttgat-aaaagcaagaataaataaaagggcaatcgaatccaactcagttgaat 423  Q
    ||| | ||||    ||||||| | || ||  |||||||| |||||| ||| | ||||  ||||  ||||| ||   ||||||||||||||||| ||||||    
T  1557483 tttttattattcgcttcaaaaat-gtaataattgttcttaaagaaccttggttaaaatgaagataaaatacaaa--caatcgaatccaactcaattgaat 1557579  T
Q  424 ccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaac--aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgat 521  Q
     |||| ||||| |  ||  ||| | || |||  || |||| |||  |  |  |||||||||| |||||  |||||||| ||||||| |||||| |  ||     
T  1557580 tcaatcgaagtttagtgtaaataacagtaaagaaaatacttaaagaatgcttaagtaaattgaaaagatgtttaaagacatgtattaaaattgtaaagac 1557679  T
Q  522 tgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaat 620  Q
    | |||| || ||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||| |||||||||||||    
T  1557680 ttaatgaaatttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaat 1557779  T
Q  621 tgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||| |||||||||||||||||||||||| |||||||||||||||    
T  1557780 tgtgacctctttttcctaagaaaaactactatttatacagatag 1557823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 452 - 632
Target Start/End: Original strand, 26460517 - 26460697
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatata 551  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||  ||||| | | |||||||||||||||||||||| ||||||||||| |||||| |    
T  26460517 aaatgaattgctcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcataca 26460616  T
Q  552 ttgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctcttt 632  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||  ||||||||| ||||| ||| ||||    
T  26460617 ttgcaacttgtgactcgtttatctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgaccacttt 26460697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 255 - 648
Target Start/End: Original strand, 16596990 - 16597373
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttcaaaagttgtgatg 354  Q
    ||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||| || ||  | || || | |||    
T  16596990 tttggtaaataaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtg-tttgtt-attttctagaaatt-taatg 16597086  T
Q  355 tttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgcgaatgaaagcaaa 454  Q
    ||  || ||||||||||| ||||||   |||||   || |||  |||||||||| |||| |||||||||||||| ||| |  || |  ||  |||| |||    
T  16597087 tta-ttattgaagaactt-gataaataaaagaa---attaaaaagcaatcgaattcaac-cagttgaatccaatcgaaattgga-gtaaaaaaaagtaaa 16597179  T
Q  455 tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattg 554  Q
    || |||||| |||| |||||||||||||||||||||||||||  ||||| | | |||||||||||||||||||||| ||||||||||| |||||| ||||    
T  16597180 tgtattacttaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattg 16597279  T
Q  555 caacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaacta 648  Q
    |||||||| |||||||| |  ||||||| |||||| |||||||||||||||||  |||||||| ||||| |||| |||| | || |||||||||    
T  16597280 caacttgtcactcgtttctttcttccatgcggataatttgagtgtaagttttttatatgattggattgtcacctgttttccttaggaaaaacta 16597373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 474 - 678
Target Start/End: Original strand, 30755478 - 30755683
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  | |||||||||||||||||||||||  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  30755478 aagtaaattgcaaagatgtgtaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 30755577  T
Q  574 cgcttccatacgga-tattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataa 672  Q
    ||||||||||||||  || ||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||  | ||||    
T  30755578 cgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatagacttataa 30755677  T
Q  673 ctacct 678  Q
    ||||||    
T  30755678 ctacct 30755683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 240 - 664
Target Start/End: Complemental strand, 11794518 - 11794094
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatatt-gtgctttgtttatct 338  Q
    ||||||||| | || |||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||  | |||| ||| |||||| || |    
T  11794518 ttgtttacactgaattttggtaaacaaccgctgatttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacttatttgtgttttgtt-attt 11794420  T
Q  339 ttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatga 438  Q
    | || || || ||||||| ||||||| ||||||| ||||||   |||||   || |||  |||||||||| |||| ||||| || ||||| ||| |  |     
T  11794419 tccagaaatt-tgatgtt-gttcttggagaactt-gataaataaaagaa---attaaaaagcaatcgaattcaacccagtttaacccaatcgaaatcgg- 11794327  T
Q  439 tgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaa-------gacatttaaagaaatgtattgaaattgcattgattgaatgtaag 531  Q
    ||  ||| || | ||||||||| ||||||| | |||||| |||||||||       |||||||||  ||||| | | |||||| ||||||||||||||||    
T  11794326 tgtaaataaaggtaaatgaattgctcaaaagagacaagtcaattgtaaattgcagagacatttaagaaaatgaacttaaattgtattgattgaatgtaag 11794227  T
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctt 631  Q
    ||||||||||| |||||| |||||||||||||| ||||||||  ||||||| |||||| ||||||||||| ||||| |||| |||||||||| |||  ||    
T  11794226 ttggtacacatgttcatacattgcaacttgtgattcgtttatatcttccatgcggataatttgagtgtaaattttttgtataattgaattgtgacccttt 11794127  T
Q  632 tttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| | ||||||| |||||||||| ||||    
T  11794126 tttcctatggaaaactactatttatacatatag 11794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 492 - 659
Target Start/End: Complemental strand, 23496714 - 23496546
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt 591  Q
    ||||||||| ||||||||| ||| |  || | ||||  ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||| |    
T  23496714 tttaaagaactgtattgaatttgtaaagacttaatgagagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagt 23496615  T
Q  592 -ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
     |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  23496614 attgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttataca 23496546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 492 - 659
Target Start/End: Complemental strand, 23491116 - 23490948
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt 591  Q
    ||||||||| ||||||||| ||| |  || | ||||  ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | |    
T  23491116 tttaaagaactgtattgaatttgtaaagacttaatgagagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggaaagt 23491017  T
Q  592 -ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
     |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  23491016 attgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttataca 23490948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 474 - 664
Target Start/End: Complemental strand, 16209977 - 16209786
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  16209977 aagtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 16209878  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||| ||| | | |||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||| |||||||||| ||||    
T  16209877 cgcttccatatggacagtattgagtgtaagtttttagtatgattgaactgtgacccgtttttcctaagaaaaactactatttatacaaatag 16209786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 524 - 659
Target Start/End: Complemental strand, 23432044 - 23431908
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||    
T  23432044 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagtgtaagtttttagtatgattgaattg 23431945  T
Q  623 ttacctctttttcctaagaaaaactattatttataca 659  Q
    | |||  ||||||||||||||||||| ||||||||||    
T  23431944 tgacccgtttttcctaagaaaaactactatttataca 23431908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 16210231 - 16210129
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16210231 ggcgtgccaatttgtttacattgaaatttcgtaaaaaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 16210132  T
Q  328 ttt 330  Q
    |||    
T  16210131 ttt 16210129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 462 - 623
Target Start/End: Original strand, 19272253 - 19272413
Alignment:
Q  462 ctcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttg 561  Q
    ||||||| ||||||||||||||||||||| |||||  ||||  | | |||||||||||||||||||||| ||||||||||| |||||| || ||||||||    
T  19272253 ctcaaaagaaacaagtaaattgtaaagacgtttaagaaaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacat-gcaacttg 19272351  T
Q  562 tgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgt 623  Q
    |||||||||| || ||||||| | |||| ||||||||||||||||  ||||||||| |||||    
T  19272352 tgactcgtttctctcttccatgcagataatttgagtgtaagttttgtgtatgattggattgt 19272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 495 - 659
Target Start/End: Original strand, 19025360 - 19025525
Alignment:
Q  495 aaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-tt 593  Q
    |||||| ||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||    
T  19025360 aaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 19025459  T
Q  594 gagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    |||||||||||||||||||||||||||||| |||  |||||| |||||||||||  ||||||||||    
T  19025460 gagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttataca 19025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 495 - 659
Target Start/End: Original strand, 19038403 - 19038568
Alignment:
Q  495 aaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-tt 593  Q
    |||||| ||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||    
T  19038403 aaagaactgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatatt 19038502  T
Q  594 gagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    |||||||||||||||||||||||||||||| |||  |||||| |||||||||||  ||||||||||    
T  19038503 gagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttataca 19038568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 480 - 664
Target Start/End: Original strand, 18258064 - 18258248
Alignment:
Q  480 attgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttc 579  Q
    |||| ||| ||||||||  ||||| | | |||||| ||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||| || |||     
T  18258064 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatgtaaattgatacacatgttcatacattgcaacttgtgactcgtttctctcttt 18258163  T
Q  580 catacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||| |||||| ||||||||||| ||||| |||| | |||||||| |||  ||||| ||||| ||||||| |||||||||| ||||    
T  18258164 catgcggataatttgagtgtaacttttttgtattaatgaattgtgaccctttttttctaaggaaaactactatttatacaaatag 18258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 219 - 330
Target Start/End: Original strand, 19038117 - 19038229
Alignment:
Q  219 ggttctacttggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagag 317  Q
    ||||| ||| |||||||||||||||||||| | |  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||    
T  19038117 ggttccactgggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaataaagtttacttgcaagatcaaccagtaaatcttaggag 19038216  T
Q  318 catattgtgcttt 330  Q
    |||||||||||||    
T  19038217 catattgtgcttt 19038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 30755243 - 30755333
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30755243 tgtttacactgaaatttggtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagtatattgtgcttt 30755333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 19272035 - 19272129
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||  |||||||||    
T  19272035 gtgccaatttgtttacactgaaatttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaatcagtaaatcttaaggacatattgtg 19272129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 524 - 618
Target Start/End: Original strand, 16310102 - 16310197
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattga 618  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||    
T  16310102 aatgaaagttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattga 16310197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 23432368 - 23432258
Alignment:
Q  225 acttggcgtgccaatttgtttacattaaaatttggtaaa----caatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagca 319  Q
    |||||| ||||||||||||||||| | |  |||||||||    ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  23432368 acttggtgtgccaatttgtttacactgatttttggtaaaagcacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagca 23432269  T
Q  320 tattgtgcttt 330  Q
    |||||||||||    
T  23432268 tattgtgcttt 23432258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 16309809 - 16309881
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  16309809 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 16309881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 19025110 - 19025186
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  19025110 tttgataaacaatcgctggtttcaataaagtttacttgcaagatcaactagtaaatcttaggagcatattgtgcttt 19025186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 23491374 - 23491298
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  23491374 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaacctgtaaatcttaggagcatgttgtgcttt 23491298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 23496972 - 23496896
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  23496972 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaacctgtaaatcttaggagcatgttgtgcttt 23496896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 26460326 - 26460412
Alignment:
Q  240 ttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||| | || |||||||||||| | ||||||| ||||| ||||||||||||||||||| ||||||||||||  |||||||||    
T  26460326 ttgtttacactgaattttggtaaacaaccactggtttaaaaatatttacttgcaagatcaaccggtaaatcttaaggacatattgtg 26460412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 19085011 - 19084918
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgt 325  Q
    ||||||||||||||||| | |  ||||||||||||| |||||||| ||| |  |||||||||||||||||| ||||||||||||  ||||||||    
T  19085011 gtgccaatttgtttacactgatttttggtaaacaatagctggtttaaaattaattacttgcaagatcaacctgtaaatcttaaggacatattgt 19084918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 540
Target Start/End: Complemental strand, 19084789 - 19084715
Alignment:
Q  466 aaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacac 540  Q
    |||||||||||||||||| ||||||| ||||  ||||  | | |||||||||||||||||||||| |||||||||    
T  19084789 aaataaacaagtaaattgcaaagacaattaagaaaataaacttaaattgcattgattgaatgtaaattggtacac 19084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 584 - 658
Target Start/End: Complemental strand, 20440805 - 20440731
Alignment:
Q  584 cggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |||||| ||||||||||||||||   ||||| || ||||| ||||||||| |||| || ||||| ||||||||||    
T  20440805 cggatagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatac 20440731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 185; Significance: 1e-99; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 229 - 678
Target Start/End: Complemental strand, 31014 - 30565
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||    
T  31014 ggcgtgccaatttgtttacactgaaatttggtaaacaatcgctggtttcaaaaatgtttatttgcaagaccaaccagtaaatcttaagagcatattgtgc 30915  T
Q  328 tttgtttatc--tttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatcc 425  Q
    |||  |||||  ||||| | ||    |   |||||||| ||||||||||||| || ||||||||||  ||||   |||||||||||||  |||||||| |    
T  30914 ttttattatccctttcagacgta---acacttgttcttaaagaactttgatagaaacaagaataaaataaagat-aatcgaatccaaccgagttgaattc 30819  T
Q  426 aattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaa 525  Q
    ||| ||||| || ||||||||| || |||  || |||| ||||| |  |||||||||| |||||  |||||||||||||||||||||| |||||| | ||    
T  30818 aatcgaagtttggtgcgaatgacagtaaagaaaatacttaaaatgattaagtaaattgcaaagatgtttaaagaaatgtattgaaatttcattgacttaa 30719  T
Q  526 tgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgtt 624  Q
    || || ||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||     
T  30718 tgaaaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtg 30619  T
Q  625 acctctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||  ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  30618 acccgtttttcctaagaaaaactactatttatacaaataggataataactacct 30565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 169; Significance: 4e-90; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 241 - 678
Target Start/End: Complemental strand, 32489 - 32051
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatc-- 337  Q
    |||||||| | |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||  |||||      
T  32489 tgtttacactgaaatttggtaaataatcgctggtttcaaaaatatttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttattatccc 32390  T
Q  338 tttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatg 437  Q
    ||||| | ||    |   |||||||| ||||||||||||| || |||||||||| | || |  ||||||||||||| |||||||||||||| |||||  |    
T  32389 tttcagacgta---acacttgttcttaaagaactttgatagaaacaagaataaaaataaagagaatcgaatccaacccagttgaatccaatcgaagttcg 32293  T
Q  438 atgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggta 537  Q
     ||| ||  | || |||  || |||| ||||| || |||||||||| |||||  ||||||||||||| ||||||||||||||| | |||| || |||||     
T  32292 gtgcaaacaacagtaaagaaaatacttaaaatgaataagtaaattgcaaagatgtttaaagaaatgtgttgaaattgcattgacttaatgaaaattggtg 32193  T
Q  538 cacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcc 636  Q
    ||||| ||||||  ||||||||| |||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  |||||||    
T  32192 cacatgttcatactttgcaacttttgactcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcc 32093  T
Q  637 taagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||||||||||| |||||||||| ||||| ||||||||||||    
T  32092 taagaaaaactactatttatacaaataggataataactacct 32051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 163; Significance: 1e-86; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 415 - 918
Target Start/End: Original strand, 68001 - 68504
Alignment:
Q  415 cagttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattg 514  Q
    |||||||||||||| |||||||||||||||| ||||  ||| |||||||||||||||||||| |||||| ||||||||||| ||||||| | | ||||||    
T  68001 cagttgaatccaatcgaagtatgatgcgaataaaagtgaataaattactcaaaataaacaagcaaattgcaaagacatttagagaaatgaacttaaattg 68100  T
Q  515 cattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatga 614  Q
    |||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  68101 cattgactgaatgtaagttagtacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagtttgagcgtaagtttttagtatga 68200  T
Q  615 ttgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataactaccttg-------ttgaaaactataactacagaaaaacta 707  Q
    ||||||||| ||   ||||||||||||||||||| |||||||||| |||| | ||||||||||| |       || |||||||||||  ||| |||||||    
T  68201 ttgaattgtgactcttttttcctaagaaaaactactatttatacaaatagag-aataactacctagtttgaaatttaaaactataaccgcag-aaaacta 68298  T
Q  708 cctaatcctagccatacgatctaaatatcgaatatagccgttggaacacttgaccttatccggataaaataactgc-tttcgagattcccctgctcatcg 806  Q
    ||||||| ||||||||||||     | ||||||||||||||| || ||||||||| ||||   | ||||||||  | |||||| || ||  ||| |||||    
T  68299 cctaatcttagccatacgat----ttgtcgaatatagccgtttgagcacttgaccctatc--tagaaaataaccacttttcgaaatccctttgcccatcg 68392  T
Q  807 aa-agaggcgcgtgtattcgattctcttctaaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcatta 905  Q
    ||  |||||||| || ||||||  ||||| ||||| |  |||||||||||| ||| ||| |||||||  ||||  ||||||||||| |||||   |||||    
T  68393 aacggaggcgcgcgtcttcgatcatcttccaaggaacacaacttcgatagagatgtaagatcaagtcccttcc-taaggtcaactcctttgatcacatta 68491  T
Q  906 aatgatacccttt 918  Q
    |||||| ||||||    
T  68492 aatgatgcccttt 68504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 415 - 918
Target Start/End: Original strand, 76106 - 76610
Alignment:
Q  415 cagttgaatccaattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattg 514  Q
    |||||||||||||| |||||||||||||||| ||||  ||| |||||||||||||||||||| |||||| ||||||||||| ||||||| | | ||||||    
T  76106 cagttgaatccaatcgaagtatgatgcgaataaaagtgaataaattactcaaaataaacaagcaaattgcaaagacatttagagaaatgaacttaaattg 76205  T
Q  515 cattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatga 614  Q
    ||||||  ||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  76206 cattgacagaatgtaagatagtacacagattcatacattgcaacttgtgactcgtttatcgcttccataaggatagtttgagcgtaagtttttagtatga 76305  T
Q  615 ttgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataactaccttg-------ttgaaaactataactacagaaaaacta 707  Q
    ||||||||| ||   ||||||||||||||||||| |||||||||| |||| | ||||||||||| |       || |||||||||||  ||| |||||||    
T  76306 ttgaattgtgactcttttttcctaagaaaaactactatttatacaaatagag-aataactacctagtttgaaatttaaaactataaccgcag-aaaacta 76403  T
Q  708 cctaatcctagccatacgatctaaatatcgaatatagccgttggaacacttgaccttatccggataaaataactgc-tttcgagattcccctgctcatcg 806  Q
    ||||||| ||||||||||||     | ||||||||||||||| || ||||||||| ||||   | ||||||||  | |||||| || ||  ||| |||||    
T  76404 cctaatcttagccatacgat----ttgtcgaatatagccgtttgagcacttgaccctatc--tagaaaataaccacttttcgaaatccctttgcccatcg 76497  T
Q  807 aa-agaggcgcgtgtattcgattctcttctaaggagcgtaacttcgatagaaatgcaaggtcaagtcttttccacaaggtcaactcttttgacttcatta 905  Q
    ||  |||||||| || ||||||  ||||| ||||| |  |||||||||||| ||| ||| |||||||  ||||| ||||||||||| |||||   |||||    
T  76498 aacggaggcgcgcgtcttcgatcatcttccaaggaacacaacttcgatagagatgtaagatcaagtcccttccataaggtcaactcctttgatcacatta 76597  T
Q  906 aatgatacccttt 918  Q
    |||||| ||||||    
T  76598 aatgatgcccttt 76610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 149; Significance: 3e-78; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 241 - 678
Target Start/End: Original strand, 151121 - 151557
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatc-- 337  Q
    |||||||| | |||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||      
T  151121 tgtttacactgaaatttggtaaacaattgctggtttcaaagaagttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttttattatccg 151220  T
Q  338 tttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatg 437  Q
    ||||| | ||    ||  |||||||| ||||| |||||||||| |||||| |||  | ||  |||||||||||||| |||||||||||||| |||||  |    
T  151221 tttcagacgta---atacttgttcttaaagaa-tttgataaaaacaagaacaaaatacaga-caatcgaatccaacccagttgaatccaatcgaagttag 151315  T
Q  438 atgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggta 537  Q
     ||| ||| | || |||  || ||||  ||||    |||||||||| |||||  |||||||||||||||||||||||||  || | |||| || |||||     
T  151316 gtgcaaataacagtaaagaaaatacttgaaatgcttaagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtg 151415  T
Q  538 cacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcc 636  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||||||    
T  151416 cacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcc 151515  T
Q  637 taagaaaaactattatttatacagatagggtaataactacct 678  Q
    |||||||||||| |||||||||| |||||   ||||||||||    
T  151516 taagaaaaactactatttatacaaataggcctataactacct 151557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 229 - 605
Target Start/End: Original strand, 161453 - 161829
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  161453 ggcgtgccaatttgcttacactgaaatttggtaaacaatcgctggtttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgc 161552  T
Q  328 tttgtttatc--tttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatcc 425  Q
    |||  |||||  ||||   ||  || ||  |||||||| |||||||||||||||| ||| || ||| | |  | |||||||||||||| |||||||||||    
T  161553 ttttattatccgtttc---agacgtaatacttgttcttaaagaactttgataaaaacaataacaaa-atacagacaatcgaatccaacccagttgaatcc 161648  T
Q  426 aattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaa 525  Q
    ||||||||| |  ||| ||| | || |||  || ||||  ||||    |||||||||| |||||  |||||||||||||||||||||||||  || | ||    
T  161649 aattgaagtttagtgcaaataacagtaaagaaaatacttgaaatgcttaagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaa 161748  T
Q  526 tgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagttt 605  Q
    || || ||||| ||||| ||||||  |||||||||||||||| ||| |||||||||||| || | | ||||||||||||||    
T  161749 tgaaaattggtgcacatgttcatactttgcaacttgtgactcatttgtcgcttccatacagacagtattgagtgtaagttt 161829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 597 - 678
Target Start/End: Original strand, 162035 - 162116
Alignment:
Q  597 tgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataactacct 678  Q
    ||||| |||||||||||||| |||||| ||| |||||||||||||||||||| |||||||||| |||||   ||||||||||    
T  162035 tgtaattttttagtatgatttaattgtgacccctttttcctaagaaaaactactatttatacaaataggcctataactacct 162116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 242 - 664
Target Start/End: Complemental strand, 9389 - 8974
Alignment:
Q  242 gtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctttc 341  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| | | ||||||||      
T  9389 gtttacactgaaatttggtaaacaatcgctggtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggacatattgtg-tctatttatcttct 9291  T
Q  342 aaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatgc 441  Q
    | || ||   || |||||||||||||||||| |||||||  ||  ||||  |||||  ||||| ||| ||||  ||||||||||||| ||||   |||      
T  9290 agaaatttgaatatttgttcttgaagaactt-gataaaacgaa--ataagaaaaag--caatcaaattcaacctagttgaatccaatcgaagaccgatat 9196  T
Q  442 gaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacaca 541  Q
     ||| ||||  |||||||| ||||||| |||||||||||||| ||||||||||||  ||||| | | |||||||||||||||||||||  ||||||||||    
T  9195 aaataaaagtgaatgaattgctcaaaagaaacaagtaaattgcaaagacatttaagaaaatgaacttaaattgcattgattgaatgtagattggtacaca 9096  T
Q  542 tattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcc-taag 640  Q
    |||||||| |||||||||||||||| |||| || ||||||| |||||| ||||| ||||||||||| ||||||||||||||| | |||||||||| ||||    
T  9095 tattcatacattgcaacttgtgacttgtttctctcttccatgcggataatttgaatgtaagttttt-gtatgattgaattgtga-ctctttttccttaag 8998  T
Q  641 aaaaactattatttatacagatag 664  Q
    | |||||| |||||||||| ||||    
T  8997 agaaactactatttatacaaatag 8974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 131; Significance: 2e-67; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 229 - 664
Target Start/End: Complemental strand, 71057 - 70628
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    ||||||||||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||   ||||||||      
T  71057 ggcgtgccaatttgtttacaccgaaatttggtaaacaatcgctagtttaaaaatgtttacttgcaagatcaaccagtaaatcttaaggatatattgtgtc 70958  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaat 428  Q
    |   |||||||    || || | || |||||||||||||||||| |||||||    |||  || ||||  |||||||||| |||| ||||||||||||||    
T  70957 ta--ttatcttctggaaattttaatatttgttcttgaagaactt-gataaaac---gaaataagaaaaaagcaatcgaattcaacccagttgaatccaat 70864  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
     ||||   | |   ||| |||| ||||||||| ||||||| | ||||| ||  |||||||||||||||  ||||| | | |||||||||||| |||||||    
T  70863 cgaagaccggtataaataaaagtaaatgaattgctcaaaagagacaagaaagctgtaaagacatttaagaaaatgaacttaaattgcattgactgaatgt 70764  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacct 628  Q
    || |||||| |||| |||||| ||||||||||||||||||||| || ||||||| |||||| ||||||||||||| ||| ||||||||||||||| | |     
T  70763 aaattggtaaacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagtattttgtatgattgaattgtgatcc 70664  T
Q  629 ctttttcctaagaaaaactattatttatacagatag 664  Q
     |||| |||| | ||||||| |||||||||| ||||    
T  70663 gttttccctatggaaaactactatttatacaaatag 70628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 126; Significance: 2e-64; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 229 - 664
Target Start/End: Original strand, 1125 - 1547
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||||| |  |||||||||||| | ||||||| ||||| |||||||||||||||||| |||||||||||||  ||||||||| |    
T  1125 ggcgtgccaatttgtttacattgatttttggtaaacaaccactggtttaaaaatatttacttgcaagatcaactagtaaatcttaaggacatattgtg-t 1223  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaat 428  Q
    ||||| || || || || || | || || |||| | |||||||  |||||||| |||  |||| ||     ||||| ||| |||| |||||||| |||||    
T  1224 ttgtt-attttccagaaatt-taatatt-gttcctaaagaactc-gataaaagaaag--taaaaaa-----caatcaaattcaacccagttgaacccaat 1312  T
Q  429 tgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgt 528  Q
     ||| |  | ||  ||| || | ||||||||| ||||||| |||||||||||||||||||||||||||  ||||| | | ||||||||||||||||||||    
T  1313 cgaaatcgg-tgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattgattgaatgt 1411  T
Q  529 aagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacct 628  Q
    || ||||||||||| |||||| ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| |||||||||| |||| |||     
T  1412 aaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgacttgtgacc- 1510  T
Q  629 ctttttcc-taagaaaaactattatttatacagatag 664  Q
    |||||||| || ||||||||| |||||||||| ||||    
T  1511 ctttttccttaggaaaaactactatttatacaaatag 1547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 126; Significance: 2e-64; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 241 - 622
Target Start/End: Complemental strand, 7834 - 7461
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatctt 339  Q
    |||||||| |||||||| ||| |||||||||||||| |||| ||||||||  ||||||||||||  |||||||||||| |||||||||||  || |||||    
T  7834 tgtttacactaaaatttagtatacaatcgctggttttaaaaatgtttactcacaagatcaaccaacaaatcttaagagtatattgtgctta-ttaatctt 7736  T
Q  340 tcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgat 439  Q
      | || || |||| |||||||||||||||||| ||| |||  ||  |||| ||||| | ||||||||| |||| ||||| ||||||||  |||| ||||    
T  7735 ctagaaattttgatatttgttcttgaagaactt-gatgaaacgaa--ataagtaaaaag-caatcgaattcaacccagtttaatccaatcaaagtttgat 7640  T
Q  440 gcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtaca 539  Q
    || ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||| | | ||| |||||||||||||||||  || ||  |    
T  7639 gcaaataaaagtaaatgaattactcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaaatgcattgattgaatgtagattcgt--a 7542  T
Q  540 catattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattg 622  Q
    | || ||||| |||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||  ||||||||||||||    
T  7541 cttactcatacattgcaacatgtgactcgtttatctcttccatgcggataatttgagtgtaagtttt--gtatgattgaattg 7461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 107; Significance: 4e-53; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 452 - 657
Target Start/End: Complemental strand, 12526 - 12321
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatata 551  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||  ||||| | | ||||||||||| ||||||| || ||||||||||| |||||| |    
T  12526 aaatgaattgctcaaaagaaacaagtaaattgtaaagacatttaagaaaatgaacttaaattgcattggttgaatgcaaattggtacacatgttcataca 12427  T
Q  552 ttgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaa-gaaaaactatt 650  Q
    ||||||||||||||| |||| || ||||||| |||||| ||||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||| |    
T  12426 ttgcaacttgtgacttgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgatttgtgacctc-ttttcctaaggaaaaactact 12328  T
Q  651 atttata 657  Q
    |||||||    
T  12327 atttata 12321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 12733 - 12638
Alignment:
Q  231 cgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||| | |  |||||||||||| || |||||| ||||| ||| |||||||||||||  ||||||||||| |  |||||||||    
T  12733 cgtgccaatttgtttacactgatttttggtaaacaaccgttggtttaaaaatatttccttgcaagatcaattagtaaatcttagggacatattgtg 12638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 4e-53; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 241 - 664
Target Start/End: Complemental strand, 18156550 - 18156137
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtttatcttt 340  Q
    |||||||| | |||| |||||||||  ||||||||| |||||  |||||||||||||||||||||||||||||||  ||||||||| |||||| |||||     
T  18156550 tgtttacactgaaatctggtaaacagccgctggtttaaaaatagttacttgcaagatcaaccagtaaatcttaaggacatattgtg-tttgtt-atcttc 18156453  T
Q  341 caaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattgaagtatgatg 440  Q
    || || ||   ||  ||||||||||||||||| |||||||      | ||||||||  ||||||| || ||||  ||||||||||||| |||||  |       
T  18156452 cagaaattt--attattgttcttgaagaactt-gataaaa------agaaataaaaaagcaatcggattcaacctagttgaatccaatcgaagttaggca 18156362  T
Q  441 cgaatgaaagcaaa-tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtaca 539  Q
      |||  ||| ||  |||||| ||||||  ||||||||||||||||||||||||||   ||||| | | |||||||||||||||||| ||| ||||||||    
T  18156361 aaaatacaagtaacgtgaattgctcaaacgaaacaagtaaattgtaaagacatttaggaaaatgaacttaaattgcattgattgaatataaattggtaca 18156262  T
Q  540 catattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaa 639  Q
    || ||||||| ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||  ||||||||| ||||| |||| |||| | ||     
T  18156261 cagattcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgaccttttttccttag 18156162  T
Q  640 gaaaaactattatttatacagatag 664  Q
    ||||| ||| |||||||||| ||||    
T  18156161 gaaaagctactatttatacaaatag 18156137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 465 - 664
Target Start/End: Original strand, 20024395 - 20024593
Alignment:
Q  465 aaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtga 564  Q
    |||| |||||||||||||| ||||||||||||  ||||| | | ||| |||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  20024395 aaaagaaacaagtaaattgcaaagacatttaagaaaatgaacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttgtga 20024494  T
Q  565 ctcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcc-taagaaaaactattatttatacagata 663  Q
    ||||||| || ||||||| |||||| ||||||||||||||||| ||||||||||||||| ||| |||||||| ||||| |||||| ||||||||||||||    
T  20024495 ctcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgattgaattgtgacc-ctttttccttaagagaaactactatttatacagata 20024592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 20506268 - 20506459
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  |||||||||||||||||||||||||  || | |||| |||||||| ||||||||||||  ||||||||||| |||||||| |    
T  20506268 aagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtaactcgtttgt 20506367  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||    
T  20506368 cgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaatag 20506459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 477 - 659
Target Start/End: Complemental strand, 40933059 - 40932877
Alignment:
Q  477 taaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgc 576  Q
    ||||||| |||||||||||| |||||| | | |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |    
T  40933059 taaattgcaaagacatttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatattcatacattgcaacttgtgactcgtttatctc 40932960  T
Q  577 ttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    |||||| | |||| ||||||||| ||||||| ||||||| ||||||| |||  |||| |||| | ||||||| ||||||||||    
T  40932959 ttccatgcagataatttgagtgttagttttttgtatgatagaattgtgaccctttttccctagggaaaactactatttataca 40932877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 455 - 623
Target Start/End: Complemental strand, 16832311 - 16832143
Alignment:
Q  455 tgaattactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattg 554  Q
    |||||| ||||||| |||||||||||||||||||||||  ||  ||||| ||| |||||||||||||||||||||| ||||||||||| |||||| ||||    
T  16832311 tgaattgctcaaaagaaacaagtaaattgtaaagacataaaagaaaatgaatttaaattgcattgattgaatgtaaattggtacacatgttcatacattg 16832212  T
Q  555 caacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgt 623  Q
    ||||||||||||||||| || |||| || |||||| ||||||||||||||||  ||||||||| |||||    
T  16832211 caacttgtgactcgtttctctcttcaatgcggataatttgagtgtaagttttgtgtatgattggattgt 16832143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 474 - 657
Target Start/End: Original strand, 21982562 - 21982746
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||   ||||||||||||||||||| |    
T  21982562 aagtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactctgcaacttgtgactcgtttgt 21982661  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttata 657  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  21982662 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttata 21982746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 474 - 664
Target Start/End: Complemental strand, 21530488 - 21530297
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  21530488 aagtaaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 21530389  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||| ||||    
T  21530388 cgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatag 21530297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 26274046 - 26274237
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  26274046 aagtaaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 26274145  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||| ||||    
T  26274146 cacttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatag 26274237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 21508231 - 21508129
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21508231 ggcgtgccaatttgtttacactgatttttggtaaacaaccgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 21508132  T
Q  328 ttt 330  Q
    |||    
T  21508131 ttt 21508129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 26273793 - 26273895
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  26273793 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 26273892  T
Q  328 ttt 330  Q
    |||    
T  26273893 ttt 26273895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 452 - 653
Target Start/End: Complemental strand, 10624518 - 10624309
Alignment:
Q  452 aaatgaattactcaaaataaacaagtaaattgtaaa-------gacatttaaagaaa-tgtattgaaattgcattgattgaatgtaagttggtacacata 543  Q
    ||||||||| ||||||| ||||||||||||||||||       ||||||| |||||| || | | ||| || ||| ||||||||||| |||||||||||     
T  10624518 aaatgaattgctcaaaagaaacaagtaaattgtaaattgcaaagacattttaagaaaatgaacttaaagtgtatttattgaatgtaaattggtacacatg 10624419  T
Q  544 ttcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgtta-cctctttttcctaagaa 642  Q
    |||||| ||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||| ||||||| ||||||| | ||| |||| |||| |||    
T  10624418 ttcatacattgcaacttgtgactcatttatctcttccatgcggataatttgagtgtaagttttt-gtatgatagaattgtgacccttttttccctaggaa 10624320  T
Q  643 aaactattatt 653  Q
    |||||| ||||    
T  10624319 aaactactatt 10624309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 20506042 - 20506134
Alignment:
Q  239 tttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20506042 tttgtttactctaaaatttggtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccaataaatcttaagagcatattgtgcttt 20506134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 537 - 664
Target Start/End: Complemental strand, 21504758 - 21504630
Alignment:
Q  537 acacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttc 635  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||    
T  21504758 acacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttc 21504659  T
Q  636 ctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||  |||||||||| ||||    
T  21504658 ctaagaaaaacttctatttatacaaatag 21504630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 21530715 - 21530639
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21530715 tttggtaaacaaccgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 21530639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 21982335 - 21982411
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21982335 tttggtaaacaatcgatggtttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 21982411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 471 - 656
Target Start/End: Complemental strand, 19212561 - 19212377
Alignment:
Q  471 aacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtt 570  Q
    ||||||||||||| ||||  |||||||||||   | | |||||||||||||||||||||| |||||||||| |||| || |||   |  ||| |||||||    
T  19212561 aacaagtaaattgcaaaggaatttaaagaaacaaacttaaattgcattgattgaatgtaaattggtacacagattcgtacattttgatgtgtaactcgtt 19212462  T
Q  571 tatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttat 656  Q
    |||| ||   || |||||| |||||||||||||||||  |||||||||||||| |||| ||||||||| ||||||||  |||||||    
T  19212461 tatctctaa-atgcggatagtttgagtgtaagttttttatatgattgaattgtgacctgtttttcctatgaaaaactgatatttat 19212377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 18024680 - 18024606
Alignment:
Q  252 aaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||    
T  18024680 aaatttgttaaacaattgctggtttaaaaatgtttacttgcaaaatcaaccagtaaatcttaaggacatattgtg 18024606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 20248965 - 20249052
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaaga 316  Q
    |||||||||| ||||||||  |||  |||||||||||| |||||||||  ||||| |||||||||||||||| |||||||||||||||    
T  20248965 ggcgtgccaagttgtttaccataatttttggtaaacaaccgctggtttacaaatgattacttgcaagatcaagcagtaaatcttaaga 20249052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 10624724 - 10624632
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt 333  Q
    |||||||| | || ||||| |||||| ||| ||||| ||||| |||||||||||||| |||||||||||||||||  ||||||||| ||||||    
T  10624724 tgtttacactgaattttggcaaacaaccgcaggtttaaaaatatttacttgcaagattaaccagtaaatcttaaggacatattgtgttttgtt 10624632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 658
Target Start/End: Original strand, 19859566 - 19859714
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||  |||||| |||||||| ||  ||  ||   |||| ||||||||||||||||      
T  19859566 aaattgcattgattgaatgtaaattggtacacaaattcatacattgggacttgtaactcgtttctc-tttagatgttgatagtttgagtgtaagttttct 19859664  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||  ||||||||| |||  ||||||||| || |||||  |||||||||    
T  19859665 gtattgttgaattgtgacccgtttttcctatgagaaactgatatttatac 19859714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 21520149 - 21520101
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaacc 302  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  21520149 tttggtaaacaaccgctggtttcaataatgtttacttgcaagatcaacc 21520101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 576
Target Start/End: Complemental strand, 21507978 - 21507876
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  21507978 aagtaaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 21507879  T
Q  574 cgc 576  Q
    |||    
T  21507878 cgc 21507876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 16832505 - 16832420
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||| | || |||||||||||   | |||||| ||||| ||||| ||||||||||| ||||||||||||||  |||||||||    
T  16832505 tgtttacactgaattttggtaaacagctgatggtttaaaaatatttacatgcaagatcaaacagtaaatcttaaggacatattgtg 16832420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Original strand, 26836013 - 26836058
Alignment:
Q  268 cgctggtttcaaaatgtttacttgcaagatcaaccagtaaatctta 313  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||    
T  26836013 cgctggtttacaaatggttacttgcaagatcaaccagtaaatctta 26836058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 750
Target Start/End: Original strand, 21982760 - 21982807
Alignment:
Q  703 aactacctaatcctagccatacgatctaaatatcgaatatagccgttg 750  Q
    |||||||||||| ||||||| |||| | ||||||||||||||||||||    
T  21982760 aactacctaatcatagccattcgatttgaatatcgaatatagccgttg 21982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 283 - 313
Target Start/End: Original strand, 17432463 - 17432493
Alignment:
Q  283 gtttacttgcaagatcaaccagtaaatctta 313  Q
    |||||||||||||||||||||||||||||||    
T  17432463 gtttacttgcaagatcaaccagtaaatctta 17432493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 658
Target Start/End: Original strand, 17432642 - 17432793
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatata-ttgcaacttgtgactcgtttatcgcttccatacggatattttga--gtgtaagttt 605  Q
    |||||||||  ||||||||||| |||||||||| ||||||| | |||  |||||| |||||||| || |||  || | |||| |||||  ||||||||||    
T  17432642 aaattgcataaattgaatgtaaattggtacacagattcatacatttgttacttgttactcgtttctc-cttgaatgcagatagtttgagtgtgtaagttt 17432740  T
Q  606 ttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |  || |||||||||||| | |  |||||  || |||||||||||||||||||    
T  17432741 tgtgtgtgattgaattgtgaaccgtttttaatatgaaaaactattatttatac 17432793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 105; Significance: 6e-52; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 232 - 664
Target Start/End: Complemental strand, 4109 - 3685
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttg 331  Q
    ||||||||||||||||| | || |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  4109 gtgccaatttgtttacactgaattttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtg-tttg 4011  T
Q  332 tttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaa-taaaagggcaatcgaatccaactcagttgaatccaattg 430  Q
     | || || ||||| || | | |||  |||||||||||||| ||||||    | |||||| ||||| ||||||||||| |||| |||||||||||||| |    
T  4010 ct-attttccaaaaatt-taacgtta-ttcttgaagaactt-gataaat---aaaataaagtaaaaaggcaatcgaattcaacccagttgaatccaatcg 3918  T
Q  431 aagtatgatgcgaatgaaagcaaatgaattactcaaaat-aaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgta 529  Q
    || |  | ||  ||| || | ||||||||| |||||||  |||||||| |||||||||||  ||||| |||||| | |  ||||  ||||||||||| ||    
T  3917 aaatcgg-tgtaaataaaggtaaatgaattgctcaaaaagaaacaagtgaattgtaaagatgtttaaggaaatgaacttgaattatattgattgaatata 3819  T
Q  530 agttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctc 629  Q
    | ||||| ||||| |||||| ||| ||||||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||| ||||||| |||      
T  3818 aattggt-cacatgttcatacatttcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgaccca 3720  T
Q  630 tttttcctaagaaaaactattatttatacagatag 664  Q
    |||| |||| | ||||||| || ||||||| ||||    
T  3719 ttttccctagggaaaactactacttatacaaatag 3685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 102; Significance: 4e-50; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 474 - 678
Target Start/End: Original strand, 8710 - 8915
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  8710 aagtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 8809  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatagggtaataa 672  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||  | ||||    
T  8810 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatacaaatagacttataa 8909  T
Q  673 ctacct 678  Q
    ||||||    
T  8910 ctacct 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 8506 - 8555
Alignment:
Q  278 aaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8506 aaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 98; Significance: 9e-48; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 232 - 659
Target Start/End: Original strand, 13853 - 14281
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttg 331  Q
    ||||||||||||||||| | || |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  13853 gtgccaatttgtttacactgaattttggtaaacaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgttttg 13952  T
Q  332 tttatctttcaaaagttgtgatgtttgttcttgaagaactttgataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatccaattga 431  Q
    || || || || || || | || ||  |||||||||||||| ||||||   || ||   |  |||  ||||||||||  ||| |||||||| ||||| ||    
T  13953 tt-attttccagaaatt-taatatta-ttcttgaagaactt-gataaataaaataaagtaagaaaaagcaatcgaatttaacccagttgaacccaatcga 14048  T
Q  432 agtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgtaaa-------gacatttaaagaaatgtattgaaattgcattgattga 524  Q
    | |  ||||  ||| |  | ||||||| | ||||||| ||||||||||||||||||       |||||||||  ||||| | | ||| |  |||||||||    
T  14049 aatc-gatgtaaataactgtaaatgaactgctcaaaagaaacaagtaaattgtaaattgcaaagacatttaagaaaatgaacttaaaataaattgattga 14147  T
Q  525 atgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgtt 624  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| |||||||||||||||     
T  14148 atgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgattgaattgtg 14246  T
Q  625 acctctttttcc-taagaaaaactattatttataca 659  Q
    ||| |||||||| || | ||||||| ||||||||||    
T  14247 acc-ctttttccttagggaaaactactatttataca 14281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 474 - 657
Target Start/End: Complemental strand, 15895 - 15711
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  |||||||||||||||||||||||||  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  15895 aagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 15796  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttata 657  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||| |||| |||  ||||||||||||||||||| ||||||||    
T  15795 cgcttccatacggatagtattgagtgtaagttttgagtatgattgatttgtgacccgtttttcctaagaaaaactactatttata 15711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 16126 - 16024
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||| ||||||||||||| | |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  16126 ggcgtgacaatttgtttacactgaaatttggtaaacaatcgctagtttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgc 16027  T
Q  328 ttt 330  Q
    |||    
T  16026 ttt 16024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 3e-47; HSPs: 10)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 474 - 657
Target Start/End: Complemental strand, 390262 - 390078
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  |||||||||||||||||||||||||  |||| |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  390262 aagtaaattgcaaagatgtttaaagaaatgtattgaaattgcaaagatttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 390163  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttata 657  Q
    | |||||||||||| | | ||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  390162 ctcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactaatatttata 390078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 25040 - 25231
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||||||||||| |||||||| |    
T  25040 aagtaaattgaaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgttactcgtttgt 25139  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||| ||||    
T  25140 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatag 25231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 28538 - 28729
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||||||||||| |||||||| |    
T  28538 aagtaaattgaaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgttactcgtttgt 28637  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||| ||||    
T  28638 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatag 28729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 115297 - 115488
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||| |||||| |||| |    
T  115297 aagtaaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaactggtgacttgtttgt 115396  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||| ||||    
T  115397 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatacaaatag 115488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 129849 - 130039
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||| |||||| |||| |    
T  129849 aagtaaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaactggtgacttgtttgt 129948  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| | || ||||||||||||||||||  |||||||||| ||||    
T  129949 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtga-ctgtttttcctaagaaaaacttctatttatacaaatag 130039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 129595 - 129697
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  129595 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 129694  T
Q  328 ttt 330  Q
    |||    
T  129695 ttt 129697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 390470 - 390391
Alignment:
Q  252 aaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  390470 aaatttggtaaacaatcgctgatttcatagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 390391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 24813 - 24886
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24813 tttggtaaacaattgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 24886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 28311 - 28384
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  28311 tttggtaaacaattgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 28384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 115069 - 115145
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  115069 tttggtaaacaatcgttggtttaaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 115145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 95; Significance: 5e-46; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 458 - 659
Target Start/End: Complemental strand, 11495 - 11293
Alignment:
Q  458 attactcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaa 557  Q
    |||||| ||||||||   |||||||| ||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||  ||||||  ||||||    
T  11495 attacttaaaataaatgggtaaattgcaaagatatttaaagaaatgtattaaaattgcattgattgaatgaaatttggtacacaggttcatactttgcaa 11396  T
Q  558 cttgtgactcgtttatcgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttat 656  Q
    |||||||||| ||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||| |||   |||||||||  ||||||| |||||||    
T  11395 cttgtgactcatttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgaccctgttttcctaaagaaaactactatttat 11296  T
Q  657 aca 659  Q
    |||    
T  11295 aca 11293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 11709 - 11607
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  11709 ggcgtgccaatttgtttacattgatatttggtaaacaatagctggtttcaaaaatgttcacttgcaagatctaccagtaaatcttaagagcatattgtgc 11610  T
Q  328 ttt 330  Q
    |||    
T  11609 ttt 11607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 4646 - 4505
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| |||||||||||| || | | ||||||||||| |||||||||||||||||||    
T  4646 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatactgacagtattgagtgtaagattttagtatgattgaattg 4547  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||||||||||||||||||||||| |||||||||||||||    
T  4546 tgacctctttttcctaagaaaaactactatttatacagatag 4505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 4925 - 4849
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  4925 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagtatattgtgcttt 4849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 94; Significance: 2e-45; HSPs: 3)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 50907 - 51048
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  50907 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 51006  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  51007 tgacccatttttcctaagaaaaactactatttatacagatag 51048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 46269 - 46410
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  46269 aatgaaagttggtacacatatacatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 46368  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  46369 tgacccatttttcctaagaaaaactactatttatacagatag 46410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 45978 - 46054
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45978 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 46054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 90; Significance: 5e-43; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 5762 - 5621
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  || ||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  5762 aatgaaagttggtacacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattg 5663  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||||||||||||||||||| |||||||||||||||    
T  5662 tgacccatttttcctaagaaaaactactatttatacagatag 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 233 - 330
Target Start/End: Complemental strand, 6075 - 5977
Alignment:
Q  233 tgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6075 tgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 5977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 89; Significance: 2e-42; HSPs: 6)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 524 - 663
Target Start/End: Complemental strand, 39989 - 39849
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||| | | |||||||||||||||| ||||||||||||||    
T  39989 aatgaaagttggtacacatattcatacttcgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattg 39890  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagata 663  Q
    | |||| ||||||||||||||||||| ||||||||||||||    
T  39889 tgacctgtttttcctaagaaaaactactatttatacagata 39849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 28530 - 28671
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||  | | ||| ||||||||||||||||||||||||||     
T  28530 aatgaaagttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgggcagtattgtgtgtaagtttttagtatgattgaatta 28629  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | ||| |||||||||||||||||||| |||||||||||||||    
T  28630 tgacccctttttcctaagaaaaactactatttatacagatag 28671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 29292 - 29483
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  |||||||||||||||||| ||||||  || | |||| || ||||| ||||||||||||  || ||||||||||||||||| |    
T  29292 aagtaaattgcaaagatgtttaaagaaatgtattgacattgcaaagacttaatgaaaattggtgcacatattcatacttttcaacttgtgactcgtttgt 29391  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||| |||||| | | | ||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  29392 cgctttcatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 29483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 29055 - 29145
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  29055 tgtttacactgaaatttggtaaacaatcgctggtttcaaagatgttcacttgcaagatcaactagtaaatcttaagagcatattgtgcttt 29145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 40306 - 40204
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||| |||||||||||||    
T  40306 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaatgatgttcacttgcaagatcaaccagtaaaccttaggagcatattgtgc 40207  T
Q  328 ttt 330  Q
    |||    
T  40206 ttt 40204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 28223 - 28313
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||| |||  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  28223 tgtttacactaatttttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtacttt 28313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 64208 - 64106
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  64208 ggcgtgccaatttgtttacactaaaatttggtaaacaatcgctgatttcaaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 64109  T
Q  328 ttt 330  Q
    |||    
T  64108 ttt 64106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 474 - 655
Target Start/End: Complemental strand, 63954 - 63772
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  ||||||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| |    
T  63954 aagtaaattgcaaagatgtttaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgt 63855  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattattta 655  Q
    |||||||||||||| | | || ||||||| ||||||||||||||||||||| |||  ||||||||||||||||||| ||||||    
T  63854 cgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattta 63772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 476 - 664
Target Start/End: Complemental strand, 7600 - 7411
Alignment:
Q  476 gtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcg 575  Q
    |||||||||||||||||||||  ||||| | |  ||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||     
T  7600 gtaaattgtaaagacatttaattaaatgaactttaattgtattgattgaatgtaagttgatacacatgttcatacattgcaacttgtgactcgtttctct 7501  T
Q  576 cttccatacggatattttgagtgtaagtttttagtatgattgaattgttac-ctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||| |||||| |||||||||| |||||| ||||||||||||||| || || |||| |||| | | | |||||||||||||| ||||    
T  7500 cttccatgcggataatttgagtgtatgttttttgtatgattgaattgtgactcttttttccctagggagagctattatttatacaaatag 7411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 268 - 326
Target Start/End: Complemental strand, 7806 - 7748
Alignment:
Q  268 cgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||  |||||||||    
T  7806 cgctggtttaaaaatatttacttgcaagatcaactagtaaatcttaaggacatattgtg 7748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 524 - 664
Target Start/End: Complemental strand, 41465 - 41324
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| |||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||||| |||||    
T  41465 aatgaaagttggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattaaattg 41366  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||| ||||||||||||||||||| |||||||||| ||||    
T  41365 tgacctgtttttcctaagaaaaactactatttatacaaatag 41324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 41747 - 41671
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41747 tttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 41671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 86; Significance: 1e-40; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 492 - 664
Target Start/End: Original strand, 142186 - 142359
Alignment:
Q  492 tttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggata-t 590  Q
    ||||||||||||||||||| ||| |  || | |||| |||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| | |    
T  142186 tttaaagaaatgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagt 142285  T
Q  591 tttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
     ||||||||||||||| | |||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  142286 attgagtgtaagttttgaatatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 142359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 118318 - 118509
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   ||||||||||||||||||| ||| |  || | |||| |||||||| ||||||||||||  |||||||||||||||||||| |    
T  118318 aagtaaattgcaaaggtgtttaaagaaatgtattgaatttgtaaagacttaatgaaagttggtgcacatattcatactttgcaacttgtgactcgtttgt 118417  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    || ||||||||||| | | |||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  118418 cgattccatacggacagtattgagtgtaagttttgcgtatgattgaattgtgacccgtttttcctaagaaaaactactatttatacaaatag 118509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 141924 - 142023
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  141924 gtgccaatttgtttacactaaaatttggtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagtatattgtgcttt 142023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 118082 - 118172
Alignment:
Q  241 tgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  118082 tgtttacactgaaatttggtaaacaatcgctggtttcaaagatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 118172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 85; Significance: 5e-40; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 513 - 664
Target Start/End: Original strand, 101996 - 102146
Alignment:
Q  513 tgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtat 612  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||| || ||||||| |||||| ||||||||||||||||| ||||    
T  101996 tgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtat 102094  T
Q  613 gattgaattgttacctctttttcc-taagaaaaactattatttatacagatag 664  Q
    ||||||||||| ||| |||||||| ||||| ||||||||||||||||| ||||    
T  102095 gattgaattgtgacc-ctttttccttaagagaaactattatttatacaaatag 102146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 229 - 370
Target Start/End: Original strand, 101751 - 101891
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | |||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||  ||||||||| |    
T  101751 ggcgtgccaatttgtttacactgaaatttagtaaacaatcgttggtttaaaaatgtttacttggaagatcaaccagtaaatcttaaggacatattgtg-t 101849  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaac 370  Q
     | ||||||||  | || || |||| ||||||||||||||||    
T  101850 ctatttatcttctagaaattttgatatttgttcttgaagaac 101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 85; Significance: 5e-40; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 532 - 659
Target Start/End: Complemental strand, 58623 - 58495
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    |||||||||| |||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||| |    
T  58623 ttggtacacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgt 58524  T
Q  631 ttttcctaagaaaaactattatttataca 659  Q
    |||||||||||||||||| ||||||||||    
T  58523 ttttcctaagaaaaactactatttataca 58495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 14662 - 14560
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  14662 ggcgtgccaatttgtttacactgatttttggtaaacaatcactggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgc 14563  T
Q  328 ttt 330  Q
    |||    
T  14562 ttt 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 58909 - 58833
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  58909 tttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgagcttt 58833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 85; Significance: 5e-40; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 463 - 659
Target Start/End: Original strand, 250023 - 250219
Alignment:
Q  463 tcaaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgt 562  Q
    |||||| ||||||||||| ||||||| || ||||  ||||  | | ||| || ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  250023 tcaaaagaaacaagtaaaatgtaaaggcacttaagaaaataaacttaaaatgtattgattgaatgtaaattggtacacaaattcatacattgcaacttgt 250122  T
Q  563 gactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||  ||||||||| ||||| ||| ||||| | |  ||||||||| ||||||||||    
T  250123 gactcgtttctcgcttccatatggataatttgagtgtaagttttgtgtatgattggattgtgaccacttttccttgggaaaaactactatttataca 250219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 249825 - 249899
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctt 329  Q
    |||||||||||| ||||| ||| |||||  |||||||||||||||||||||||||||||||  ||||||||||||    
T  249825 tttggtaaacaaccgctgatttaaaaattgttacttgcaagatcaaccagtaaatcttaaggacatattgtgctt 249899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 495 - 659
Target Start/End: Original strand, 44233 - 44398
Alignment:
Q  495 aaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-tt 593  Q
    |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| | | ||    
T  44233 aaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatt 44332  T
Q  594 gagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  44333 gagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactcctatttataca 44398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 43985 - 44057
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  43985 tttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 44057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 81; Significance: 1e-37; HSPs: 4)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 532 - 659
Target Start/End: Complemental strand, 23149 - 23021
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  |    
T  23149 ttggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgt 23050  T
Q  631 ttttcctaagaaaaactattatttataca 659  Q
    |||||||||||||||||| ||||||||||    
T  23049 ttttcctaagaaaaactactatttataca 23021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 532 - 663
Target Start/End: Complemental strand, 44325 - 44193
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||| |||| |||||||  |||||||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||  |    
T  44325 ttggtgcacagattcatactttgcaacttgtgactcgtttgtcgctttcatacggacattattgagtgtaagtttttagtatgattgaattgtgacccgt 44226  T
Q  631 ttttcctaagaaaaactattatttatacagata 663  Q
    |||||||||||||||||| ||||||||||||||    
T  44225 ttttcctaagaaaaactactatttatacagata 44193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 23463 - 23361
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  23463 ggcgtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaattatgtttacttgcaagatcaactagtaaatcttaggagcatattgtgc 23364  T
Q  328 ttt 330  Q
    |||    
T  23363 ttt 23361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 44613 - 44537
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  44613 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaactagtaaatcttaggagcatattgtgcttt 44537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 513 - 664
Target Start/End: Original strand, 3692 - 3842
Alignment:
Q  513 tgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtat 612  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||| || ||||||| |||||| ||||||||||||||||| ||||    
T  3692 tgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtat 3790  T
Q  613 gattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||| |||  |||| | ||||| |||||| |||||||||| ||||    
T  3791 gattgaattgtgaccctttttacttaagagaaactaatatttatacaaatag 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 229 - 370
Target Start/End: Original strand, 3447 - 3587
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | |||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||  ||||||||| |    
T  3447 ggcgtgccaatttgtttacactgaaatttagtaaacaatcgttggtttaaaaatgtttacttggaagatcaaccagtaaatcttaaggacatattgtg-t 3545  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaac 370  Q
     | ||||||||  | || || |||| ||||||||||||||||    
T  3546 ctatttatcttctagaaattttgatatttgttcttgaagaac 3587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Complemental strand, 25261 - 25070
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  || |||||||||||||||| ||| |  || | |||  || ||||| || |||||||||  |||||||||||||||||||| |    
T  25261 aagtaaattgcaaagatgttcaaagaaatgtattgaacttgtaaagacttaataaaaattggtgcatatattcatactttgcaacttgtgactcgtttgt 25162  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||| |||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||| ||||    
T  25161 cgcatccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatacaaatag 25070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 25488 - 25412
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaa-tgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  25488 tttggtaaacaatcgctggttttaaaaatgttttcttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 25412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 80; Significance: 5e-37; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 18450 - 18641
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||| |||||||||||||||| |    
T  18450 aagtaaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgtaacttgtgactcgtttgt 18549  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  ||||| |||| ||||    
T  18550 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttctacaaatag 18641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 27981 - 28172
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| |||||  || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||| |||||||||||||||| |    
T  27981 aagtaaattgcaaagatgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgtaacttgtgactcgtttgt 28080  T
Q  574 cgcttccatacggata-ttttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||  ||||| |||| ||||    
T  28081 cgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttctacaaatag 28172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 18199 - 18298
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  18199 gtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaataatgtacacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 18298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 27730 - 27829
Alignment:
Q  232 gtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  27730 gtgccaatttgtttacactgatttttggtaaacaatcgctggtttcaataatgtacacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 27829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 74; Significance: 2e-33; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 8088 - 8221
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||| |||| |||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  |    
T  8088 ttggtgcacaaattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgt 8187  T
Q  631 ttttcctaagaaaaactattatttatacagatag 664  Q
    |||| ||||||||||||| |||||||||| ||||    
T  8188 tttttctaagaaaaactactatttatacaaatag 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 15218 - 15351
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||| |||| |||||||  |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||| |||  |    
T  15218 ttggtgcacaaattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgt 15317  T
Q  631 ttttcctaagaaaaactattatttatacagatag 664  Q
    |||| ||||||||||||| |||||||||| ||||    
T  15318 tttttctaagaaaaactactatttatacaaatag 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 7817 - 7893
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7817 tttggtacacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 7893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 14947 - 15023
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14947 tttggtacacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 15023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 73; Significance: 7e-33; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 532 - 663
Target Start/End: Original strand, 43128 - 43260
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||| |||| |||||||  ||||||||| |||||||||| ||||||||||||||| | | |||||||||||| ||||||||||||||||||| |||  |    
T  43128 ttggtgcacagattcatactttgcaacttatgactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgaattgtgacccgt 43227  T
Q  631 ttttcctaagaaaaactattatttatacagata 663  Q
    |||||||||||||||||| ||||||||||||||    
T  43228 ttttcctaagaaaaactactatttatacagata 43260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 42852 - 42916
Alignment:
Q  267 tcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42852 tcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 42916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 532 - 664
Target Start/End: Original strand, 5789 - 5922
Alignment:
Q  532 ttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctct 630  Q
    ||||| |||| |||||||  |||||||||||||||||||| ||||||||||||||| |   || ||||||||||||||||||||||||||||| |||  |    
T  5789 ttggtgcacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaaaattaagtgtaagtttttagtatgattgaattgtgaccctt 5888  T
Q  631 ttttcctaagaaaaactattatttatacagatag 664  Q
    |||||||||||||||||| |||||||||| ||||    
T  5889 ttttcctaagaaaaactactatttatacaaatag 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 5502 - 5578
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5502 tttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtgcttt 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 465 - 658
Target Start/End: Original strand, 8724 - 8917
Alignment:
Q  465 aaaataaacaagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtga 564  Q
    |||| |||||||||||||| ||||||||||||   |||  | | |||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||    
T  8724 aaaagaaacaagtaaattgcaaagacatttaagagaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtga 8823  T
Q  565 ctcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||||| || |||  ||  ||||| ||||||||||||||||  ||||||||| ||||| |||  |||| | || | ||||||| |||||||||    
T  8824 ctcgtttctctcttgaatgtggatagtttgagtgtaagttttgtgtatgattggattgtgacccgttttccttatggaaaactactatttatac 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 2429 - 2488
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaa 314  Q
    |||||||||||| ||||||||| ||| |  || |||||||||||||||||||||||||||    
T  2429 tttggtaaacaaccgctggtttaaaattaattgcttgcaagatcaaccagtaaatcttaa 2488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 552 - 678
Target Start/End: Complemental strand, 1834 - 1707
Alignment:
Q  552 ttgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactatt 650  Q
    |||||||||||||||||||| ||||||||||||||| | | |||||  ||||||||||||||||||||||||| |||  ||||||||||||||||||| |    
T  1834 ttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagcataagtttttagtatgattgaattgtgacccatttttcctaagaaaaactact 1735  T
Q  651 atttatacagatagggtaataactacct 678  Q
    ||||||||| |||||   ||||||||||    
T  1734 atttatacaaataggcctataactacct 1707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 2109 - 2030
Alignment:
Q  252 aaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2109 aaatttggtaaacaatcgctggtttcaaagatgttcacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 474 - 664
Target Start/End: Original strand, 26728 - 26919
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttat 573  Q
    |||||||||| ||||   || |||||||||||||||| ||| |  || | |||| || ||||| ||||||||||||  ||||||||||||| |||||| |    
T  26728 aagtaaattgcaaagttgttcaaagaaatgtattgaatttgtaaagacttaatgaaaattggtgcacatattcatactttgcaacttgtgaatcgtttgt 26827  T
Q  574 cgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    |||  ||||||||| | | |||||||||||||||||||||||||||||||| |||  |||||||||||||||||   |||||||||| ||||    
T  26828 cgcaaccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacccctatttatacaaatag 26919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 26501 - 26577
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  26501 tttggtaaacaatcgttggtttcaataatgtttacttgcaagatcaactagtaaatcttaggagcatattgtgcttt 26577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 229 - 623
Target Start/End: Complemental strand, 36753 - 36355
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgct 328  Q
    |||||||||||||||||||| | || ||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |    
T  36753 ggcgtgccaatttgtttacactgaattttggtaaaaaaccgctggtttaaaaatatttacttgcaagatcaaccagtaaatcttaaggacatattgtgtt 36654  T
Q  329 ttgtttatctttcaaaagttgtgatgtttgttcttgaagaactt--tg-ataaaagcaagaataaataaaagggcaatcgaatccaactcagttgaatcc 425  Q
    ||| |||| ||||| ||  | | ||   | ||||||||||||||  || ||||||  |||    || ||||  |||||||||| |||| |||||||||||    
T  36653 ttg-ttatttttcagaaact-taat-actattcttgaagaacttgatgaataaaataaag---taagaaaaaagcaatcgaattcaacccagttgaatcc 36560  T
Q  426 aattgaagtatgatgcgaatgaaagcaaatgaattactcaaaataaacaagtaaattgt-------aaagacatttaaag-aaatgtattgaaattgcat 517  Q
    ||| ||| |  | ||  ||| |  | ||||||||| ||||||  |||||||||||||||       |||||||||| ||| ||||| | |  ||||| ||    
T  36559 aatcgaaat-cggtgtaaataactggaaatgaattgctcaaatgaaacaagtaaattgtaaattgcaaagacattttaagtaaatgaacttgaattgaat 36461  T
Q  518 tgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtatgattg 617  Q
    ||||  ||||||||||||||||||| |||||| ||||||||||||||||||||| || ||||||| || ||| || ||||| |||| ||| |||| ||||    
T  36460 tgatcaaatgtaagttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcgaataattagagtgaaagtattttgtattattg 36361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 524 - 664
Target Start/End: Original strand, 15324 - 15465
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattg 622  Q
    |||| ||||||||| ||||||| |||  ||||||||||| |||||||| ||||||||||||||| | | ||||| |||||||||||||||||||||||||    
T  15324 aatgaaagttggtaaacatattaatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattg 15423  T
Q  623 ttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    | |||  ||| || ||| |||||||| |||||||||||||||    
T  15424 tgaccattttatcataaaaaaaactactatttatacagatag 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 15050 - 15122
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  15050 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagatcaaccagtaaatcttaggagcatattgtg 15122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 66; Significance: 1e-28; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 475 - 659
Target Start/End: Complemental strand, 2611 - 2426
Alignment:
Q  475 agtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatc 574  Q
    ||||||||| |||||  || |||||||||||||||| ||  |  || | |||| || ||||| ||||||||||||  ||||||||||| |||||||| ||    
T  2611 agtaaattgcaaagatgttcaaagaaatgtattgaatttataaagacttaatgaaaattggtgcacatattcatactttgcaacttgtaactcgtttgtc 2512  T
Q  575 gcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    ||||||||||||| | | ||||| |||||||||| ||||||||||||||| |||  |||||| |||||||||||  ||||||||||    
T  2511 gcttccatacggacagtattgagggtaagtttttggtatgattgaattgtgacccgtttttcttaagaaaaacttctatttataca 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 2867 - 2765
Alignment:
Q  229 ggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgc 327  Q
    |||||||||||||||||||| | |  |||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  2867 ggcgtgccaatttgtttacactgatttttggtaaacaatctctggtttcaatgatgtttacttgcaagatcaactagtaaatcttaggagcatattgtgc 2768  T
Q  328 ttt 330  Q
    |||    
T  2767 ttt 2765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 513 - 632
Target Start/End: Complemental strand, 1440 - 1321
Alignment:
Q  513 tgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttttagtat 612  Q
    |||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||||| || ||||||| || ||| ||||||||||||||||  ||||    
T  1440 tgcattgattgaatgtaaattggtacacatgatcatacattgcaacttgtgactcgtttctctcttccatgcgaataatttgagtgtaagttttgtgtat 1341  T
Q  613 gattgaattgttacctcttt 632  Q
    ||||| ||||| ||| ||||    
T  1340 gattggattgtaaccacttt 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 1679 - 1601
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgctttgtt 333  Q
    |||| |||||||||| |||||| ||| |  | |||||||||||||||||||||||||||||  ||||||||||||||||    
T  1679 tttgttaaacaatcgttggtttaaaattaatcacttgcaagatcaaccagtaaatcttaaggacatattgtgctttgtt 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 11934 - 11858
Alignment:
Q  255 tttggtaaacaatcgctggtttcaa-aatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  11934 tttggtaaacaatcgctggtttcaataatgtttacttgcaagatcaactagtaaatcttaggagcatattgtgcttt 11858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 61; Significance: 1e-25; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 32538 - 32446
Alignment:
Q  239 tttgtttacattaaaatttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    ||||||||||   |||||||||||||||||| |||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32538 tttgtttacaccgaaatttggtaaacaatcgttggtttcaaagatgtttacttgcaagatcaacttgtaaatcttaagagcatattgtgcttt 32446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 573 - 664
Target Start/End: Complemental strand, 29203 - 29112
Alignment:
Q  573 tcgcttccatacggatatt-ttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatacagatag 664  Q
    ||||||||||||||| | | ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  29203 tcgcttccatacggacagtattgagtgtaagttttgagt-tgattgaattgtgacctctttttcctaagaaaaactactatttatacagatag 29112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 474 - 571
Target Start/End: Complemental strand, 32299 - 32202
Alignment:
Q  474 aagtaaattgtaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgttt 571  Q
    |||||||||| ||||| ||||||||| |||||||||||||| |  || | |||| || ||||||||||| ||||||  ||||||||||||||||||||    
T  32299 aagtaaattgaaaagatatttaaagacatgtattgaaattgtaaagacttaatgaaatttggtacacatgttcatactttgcaacttgtgactcgttt 32202  T

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Target: scaffold0516 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 10983 - 11059
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaa-atgtttacttgcaagatcaaccagtaaatcttaagagcatattgtgcttt 330  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  10983 tttggtaaacaatcgctggtttcaatgatgtttacttgcaagaccaaccagtaaatcttaggagcatattgtgcttt 11059  T

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Target: scaffold0516; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 524 - 571
Target Start/End: Original strand, 11274 - 11321
Alignment:
Q  524 aatgtaagttggtacacatattcatatattgcaacttgtgactcgttt 571  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||    
T  11274 aatgaaagttggtacacatattcatactttgcaacttgtgactcgttt 11321  T

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Target: scaffold1496 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 658
Target Start/End: Complemental strand, 1544 - 1396
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttcc--atacggatattttgagtgtaagtttt 606  Q
    |||||||| ||||||||||||| |||||||||| ||||||| |||   |||||| |||||||| ||   |||  || | |||| ||||||||||||||||    
T  1544 aaattgcaatgattgaatgtaaattggtacacagattcatacattctgacttgttactcgtttctc---tccgaatgcagatagtttgagtgtaagtttt 1448  T
Q  607 tagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
      ||||||||||||||| |||  |||||| || ||||||||| |||||||||    
T  1447 ccgtatgattgaattgtgacccgtttttcttatgaaaaactactatttatac 1396  T

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Target: scaffold0058 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 637
Target Start/End: Original strand, 15013 - 15142
Alignment:
Q  507 tgaaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagtttt 606  Q
    |||||||||||||||||||||||| | |||||||| ||||||| |||   |||||| ||||||||||| | |  || |||||| ||| ||||||||||||    
T  15013 tgaaattgcattgattgaatgtaaatcggtacacaaattcatacattttgacttgtaactcgtttatctc-tagatgcggatagttttagtgtaagtttt 15111  T
Q  607 tagtatgattgaattgttacctctttttcct 637  Q
    | || || ||||||||| |||| ||||||||    
T  15112 ttgtctggttgaattgtgacctgtttttcct 15142  T

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Target: scaffold0035 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 509 - 658
Target Start/End: Original strand, 25740 - 25888
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||| ||| || |||| |||||||||| ||||||| ||||  |||||| |||| ||| || ||   || |||||| ||| ||||||||||||      
T  25740 aaattgcatttattaaacgtaaattggtacacagattcatacattgtgacttgttactcatttctctctaa-atgcggataatttaagtgtaagttttct 25838  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    ||||||||||||||| |||  ||||||||| ||||||||| |||||||||    
T  25839 gtatgattgaattgtgacccgtttttcctatgaaaaactactatttatac 25888  T

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Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 25498 - 25568
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||||||  |||||||| |||||  ||||||||||| |||||||||||||||||||| |||||||||    
T  25498 tttggtaaacaactgctggtttaaaaatagttacttgcaagttcaaccagtaaatcttaaga-catattgtg 25568  T

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Target: scaffold0504 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 584 - 658
Target Start/End: Original strand, 685 - 759
Alignment:
Q  584 cggatattttgagtgtaagtttttagtatgattgaattgttacctctttttcctaagaaaaactattatttatac 658  Q
    |||||| ||||||||||||||||| |||||| |||||||| |||| |||| |||| ||||||||| |||||||||    
T  685 cggatagtttgagtgtaagttttttgtatgactgaattgtgacctgttttccctatgaaaaactactatttatac 759  T

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Target: scaffold0504; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 326
Target Start/End: Original strand, 334 - 440
Alignment:
Q  220 gttctacttggcgtgccaatttgtttacattaaaatttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagca 319  Q
    |||||||| ||||||||||||||||||   |    |||||||||||| | || |||| |||||  |||||||||||||||||||||||||||| ||  ||    
T  334 gttctactgggcgtgccaatttgtttagcctggtttttggtaaacaacctctagtttaaaaatagttacttgcaagatcaaccagtaaatctttaggaca 433  T
Q  320 tattgtg 326  Q
    |||||||    
T  434 tattgtg 440  T

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Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 647
Target Start/End: Original strand, 26915 - 27052
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    ||||||||||||||||| |||| |||||||||||||||||| | ||  |||||| |||||||| || | |  || | |||| ||||| |||||||||||     
T  26915 aaattgcattgattgaaagtaaattggtacacatattcatacagtgtgacttgtaactcgtttctctc-taaatgcagatagtttgattgtaagtttttt 27013  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaact 647  Q
    ||||| ||||||||  |||| ||||||||| || |||||    
T  27014 gtatggttgaattgcaacctgtttttcctatgagaaact 27052  T

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Target: scaffold0126 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 509 - 659
Target Start/End: Original strand, 31211 - 31360
Alignment:
Q  509 aaattgcattgattgaatgtaagttggtacacatattcatatattgcaacttgtgactcgtttatcgcttccatacggatattttgagtgtaagttttta 608  Q
    |||||||||  ||||||||||| |||||||||| ||||||| ||||  | |||| || ||||| ||  ||  ||  ||||| ||||||||| ||||||      
T  31211 aaattgcataaattgaatgtaaattggtacacagattcatacattgtgatttgttacgcgtttctct-ttgaatgtggatagtttgagtgttagttttct 31309  T
Q  609 gtatgattgaattgttacctctttttcctaagaaaaactattatttataca 659  Q
    ||||||||||| | | || | ||||||||||||||||||| ||||||||||    
T  31310 gtatgattgaactctgacatgtttttcctaagaaaaactactatttataca 31360  T

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Target: scaffold0126; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 28808 - 28878
Alignment:
Q  255 tttggtaaacaatcgctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    |||||||||||| |||  |||| |||||  ||||||||||||||||||||||||||||| || |||||||||    
T  28808 tttggtaaacaaccgcgagtttaaaaatagttacttgcaagatcaaccagtaaatcttagga-catattgtg 28878  T

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Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 43431 - 43487
Alignment:
Q  269 gctggtttcaaaatgtttacttgcaagatcaaccagtaaatcttaagagcatattgtg 326  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  43431 gctggtttacaaatggttacttgcaagatcaaccagtaaatcttaaga-catattgtg 43487  T

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