View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4927_high_6 (Length: 351)
Name: NF4927_high_6
Description: NF4927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4927_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 11 - 332
Target Start/End: Complemental strand, 40080528 - 40080207
Alignment:
| Q |
11 |
cagagagtagtactaagatggatgtcaagacaccgtttctatgttctccaccaccggctaaagcaatggccagtgctaataaaacccatgcagcaacgtc |
110 |
Q |
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| T |
40080528 |
cagagagtagtactaagatggatgtcaagacaccgtttctatgttctccaccaccggctaaagcaatggccagtgctaataaaacccatgcagcaacgtc |
40080429 |
T |
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| Q |
111 |
gttaaaagcagctgcggccatggcagtttctcctacttgtgttgttaacaatttaagctctgctaagatgcgtgcgagtacagggaaagcagtgatggag |
210 |
Q |
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| T |
40080428 |
gttaaaagcagctgcggccatggcagtttctcctacttgtgttgttaacaatttaagctctgctaagatgcgtgcgagtacagggaaagcagtgatggag |
40080329 |
T |
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| Q |
211 |
agagatacgcctaagaatatgaagagttgaaagtaactgactttgtgagtttcagagttgaaatggatgactttttggagaaggaaggttactccgatgg |
310 |
Q |
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| T |
40080328 |
agagatacgcctaagaatatgaagagttgaaagtaactgactttgtgagtttcagagttgaaatggatgactttttggagaaggaaggttactccgatgg |
40080229 |
T |
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| Q |
311 |
cgaagaggaatgggagggatat |
332 |
Q |
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|||||||||||||||||||||| |
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| T |
40080228 |
cgaagaggaatgggagggatat |
40080207 |
T |
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