View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4928-Insertion-24 (Length: 438)
Name: NF4928-Insertion-24
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4928-Insertion-24 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 28 - 298
Target Start/End: Original strand, 29393254 - 29393528
Alignment:
| Q |
28 |
tagatttattcaaaaacaatattaaatgcaacgccgttgctaactgataaaaagcatgtgtagatacattgtatatttcctctagtgtttagaaatttga |
127 |
Q |
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| T |
29393254 |
tagatttattcaaaaacaatattaaatgcgacgccgttgctaactgataaaaagcatgtgtagatacattgtatatttcctctagtgtttagaaatttga |
29393353 |
T |
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| Q |
128 |
caaagaatgaacatgtcaagccaacaaacatttccatttgaaacagaacacgtacatattccaaattaaagttttaaatttattaaattgtttttctata |
227 |
Q |
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| T |
29393354 |
caaagaatgaacatgtcaagccaacaaacatttccatttgaaacagaacacgtacatattccaaattaaagttttaaatttattaaattgtttttctata |
29393453 |
T |
|
| Q |
228 |
caatttcattgctg-aattggaactatcagtttaa-aattctcatgttaag-tctatgagg-agtcaatgtcgta |
298 |
Q |
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|||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||| |
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| T |
29393454 |
caatttcattgctgaaattgtaactatcagtttaacaattctcatgttaagttctatgaggaagtcaatgtcgta |
29393528 |
T |
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