View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928-Insertion-25 (Length: 427)

Name: NF4928-Insertion-25
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928-Insertion-25
NF4928-Insertion-25
[»] chr3 (16 HSPs)
chr3 (8-426)||(32928589-32929007)
chr3 (360-414)||(7938717-7938772)
chr3 (359-427)||(10498695-10498764)
chr3 (360-426)||(1149070-1149137)
chr3 (360-414)||(42074096-42074151)
chr3 (366-427)||(21245792-21245854)
chr3 (359-412)||(47377364-47377418)
chr3 (365-426)||(916438-916499)
chr3 (368-412)||(6000683-6000728)
chr3 (365-405)||(7868720-7868761)
chr3 (365-405)||(33223866-33223907)
chr3 (365-405)||(43490439-43490480)
chr3 (367-426)||(13800667-13800727)
chr3 (367-414)||(38559909-38559957)
chr3 (361-412)||(48076153-48076205)
chr3 (360-412)||(48688108-48688160)
[»] chr4 (25 HSPs)
chr4 (365-414)||(17134123-17134173)
chr4 (365-413)||(54500567-54500616)
chr4 (362-413)||(2587714-2587766)
chr4 (360-427)||(50362139-50362207)
chr4 (365-427)||(21317338-21317401)
chr4 (360-426)||(22164270-22164337)
chr4 (365-426)||(52869010-52869073)
chr4 (361-414)||(8734844-8734898)
chr4 (365-426)||(19588152-19588214)
chr4 (360-405)||(37463515-37463561)
chr4 (361-426)||(40070969-40071035)
chr4 (365-426)||(10261770-10261831)
chr4 (365-426)||(21562624-21562685)
chr4 (365-426)||(24079841-24079902)
chr4 (365-426)||(26926711-26926772)
chr4 (365-425)||(36569171-36569232)
chr4 (366-427)||(42861745-42861806)
chr4 (365-426)||(43330145-43330206)
chr4 (365-426)||(51450211-51450272)
chr4 (366-414)||(56497621-56497670)
chr4 (360-427)||(7230273-7230341)
chr4 (366-425)||(25999396-25999456)
chr4 (360-427)||(29908049-29908117)
chr4 (365-412)||(32923245-32923293)
chr4 (365-424)||(50380839-50380899)
[»] chr1 (21 HSPs)
chr1 (365-426)||(44243871-44243933)
chr1 (360-426)||(42045373-42045440)
chr1 (359-405)||(50595905-50595952)
chr1 (365-413)||(36371054-36371103)
chr1 (366-421)||(3136694-3136750)
chr1 (367-414)||(12522132-12522180)
chr1 (360-426)||(32497482-32497549)
chr1 (360-405)||(7925357-7925403)
chr1 (361-414)||(26498055-26498109)
chr1 (372-426)||(43356441-43356495)
chr1 (360-408)||(7484713-7484762)
chr1 (367-427)||(25165092-25165153)
chr1 (361-405)||(35473946-35473991)
chr1 (366-414)||(38214001-38214050)
chr1 (366-426)||(45140007-45140068)
chr1 (365-421)||(45701326-45701383)
chr1 (365-405)||(48681955-48681996)
chr1 (365-412)||(3157732-3157780)
chr1 (365-412)||(3573339-3573387)
chr1 (367-426)||(40411754-40411814)
chr1 (359-426)||(45677277-45677345)
[»] chr2 (21 HSPs)
chr2 (361-425)||(9384730-9384794)
chr2 (362-405)||(22608522-22608566)
chr2 (361-412)||(28825109-28825161)
chr2 (365-401)||(30191712-30191748)
chr2 (360-426)||(346125-346192)
chr2 (359-405)||(20455883-20455930)
chr2 (360-405)||(7206118-7206164)
chr2 (365-414)||(27412849-27412899)
chr2 (360-405)||(32204537-32204583)
chr2 (365-426)||(3708692-3708753)
chr2 (365-426)||(11868663-11868724)
chr2 (365-426)||(21929469-21929530)
chr2 (360-424)||(27244650-27244715)
chr2 (365-426)||(35360056-35360117)
chr2 (365-425)||(41555292-41555353)
chr2 (362-426)||(44110945-44111010)
chr2 (366-413)||(7413203-7413251)
chr2 (367-426)||(23250321-23250381)
chr2 (367-426)||(29544627-29544687)
chr2 (365-412)||(30243248-30243296)
chr2 (361-412)||(32957558-32957610)
[»] scaffold0012 (2 HSPs)
scaffold0012 (360-426)||(118812-118879)
scaffold0012 (361-426)||(242297-242363)
[»] scaffold0008 (1 HSPs)
scaffold0008 (361-414)||(122885-122939)
[»] chr8 (21 HSPs)
chr8 (365-426)||(41603059-41603121)
chr8 (360-412)||(10732790-10732843)
chr8 (360-412)||(33445563-33445616)
chr8 (366-426)||(41625193-41625254)
chr8 (365-427)||(2181126-2181189)
chr8 (359-425)||(27191750-27191817)
chr8 (360-426)||(39821877-39821944)
chr8 (360-425)||(6038277-6038343)
chr8 (360-401)||(35103099-35103141)
chr8 (365-426)||(20665364-20665425)
chr8 (365-426)||(30550727-30550788)
chr8 (365-405)||(37015858-37015899)
chr8 (365-405)||(37117546-37117587)
chr8 (365-413)||(39975488-39975537)
chr8 (365-426)||(44215476-44215537)
chr8 (361-412)||(3456836-3456888)
chr8 (361-412)||(3650514-3650566)
chr8 (387-427)||(29652239-29652279)
chr8 (366-405)||(32878660-32878700)
chr8 (365-405)||(36218232-36218272)
chr8 (358-390)||(41860489-41860521)
[»] chr7 (27 HSPs)
chr7 (361-426)||(3671818-3671884)
chr7 (360-426)||(10242474-10242540)
chr7 (365-426)||(19036103-19036164)
chr7 (365-426)||(20718472-20718533)
chr7 (358-426)||(35001132-35001200)
chr7 (360-427)||(27993029-27993097)
chr7 (360-412)||(36755008-36755060)
chr7 (360-412)||(36760805-36760857)
chr7 (361-424)||(42435401-42435465)
chr7 (361-427)||(16537536-16537603)
chr7 (361-427)||(16628059-16628126)
chr7 (365-410)||(5526723-5526769)
chr7 (361-414)||(22327672-22327726)
chr7 (360-405)||(25602910-25602956)
chr7 (360-405)||(36803831-36803877)
chr7 (361-414)||(10409941-10409994)
chr7 (365-426)||(20763153-20763214)
chr7 (366-426)||(25251509-25251570)
chr7 (365-426)||(29488719-29488780)
chr7 (365-426)||(33232398-33232459)
chr7 (365-426)||(34284540-34284601)
chr7 (367-426)||(4061741-4061801)
chr7 (360-427)||(7670427-7670495)
chr7 (368-427)||(36341065-36341125)
chr7 (367-426)||(38374192-38374252)
chr7 (367-426)||(43539105-43539165)
chr7 (387-427)||(45645236-45645276)
[»] chr6 (12 HSPs)
chr6 (365-426)||(7082993-7083055)
chr6 (367-426)||(12582230-12582289)
chr6 (365-410)||(5632132-5632178)
chr6 (365-426)||(20744136-20744198)
chr6 (365-426)||(247658-247719)
chr6 (360-404)||(29740475-29740520)
chr6 (365-405)||(33938701-33938742)
chr6 (365-412)||(4826288-4826336)
chr6 (387-427)||(8138458-8138498)
chr6 (354-414)||(12256464-12256524)
chr6 (360-427)||(28592687-28592755)
chr6 (365-405)||(33542829-33542869)
[»] chr5 (17 HSPs)
chr5 (365-426)||(15889409-15889471)
chr5 (360-412)||(10199012-10199065)
chr5 (359-426)||(6488999-6489067)
chr5 (365-405)||(23422890-23422930)
chr5 (360-406)||(41939283-41939330)
chr5 (360-426)||(6345032-6345098)
chr5 (360-405)||(27721697-27721743)
chr5 (360-425)||(30488918-30488984)
chr5 (367-405)||(35413314-35413352)
chr5 (365-405)||(19759927-19759968)
chr5 (365-426)||(37462110-37462171)
chr5 (366-398)||(4666510-4666542)
chr5 (366-413)||(26409252-26409300)
chr5 (362-426)||(29667870-29667937)
chr5 (366-398)||(32158478-32158510)
chr5 (365-424)||(36623177-36623237)
chr5 (359-426)||(42473886-42473954)
[»] scaffold0001 (1 HSPs)
scaffold0001 (360-405)||(505004-505049)
[»] scaffold0777 (1 HSPs)
scaffold0777 (364-412)||(5437-5485)
[»] scaffold0350 (1 HSPs)
scaffold0350 (360-425)||(1241-1307)
[»] scaffold0098 (1 HSPs)
scaffold0098 (365-405)||(5423-5464)
[»] scaffold0003 (1 HSPs)
scaffold0003 (365-409)||(349625-349670)
[»] scaffold1515 (1 HSPs)
scaffold1515 (367-426)||(657-717)


Alignment Details
Target: chr3 (Bit Score: 387; Significance: 0; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 8 - 426
Target Start/End: Complemental strand, 32929007 - 32928589
Alignment:
Q  8 tgaataacagtcatttatatggtgtatctagtgctgagttctttataggtgtatcagtagaaaagtgggaataattgcaggatgattgcgaagaaaattg 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32929007 tgaataacagtcaattatatggtgtatctagtgctgagttctttataggtgtatcagtagaaaagtgggaataattgcaggatgattgcgaagaaaattg 32928908  T
Q  108 tttacactgctcggttacatgtgtcgggtcacactatggctttgtaggaagtatttctatcaatagattagagaacattcaatttatttatagacatagc 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32928907 tttacactgctcggttacatgtgtcgggtcacactatggttttgtaggaagtatttctatcaatagattagagagcattcaatttatttatagacatagc 32928808  T
Q  208 gtgatatttagtcaaagaaagcaatggtggcatgcatgcatatgcatagtcggatagatagagaagttcaaaactcaaagtgaaaaaatattggacgatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32928807 gtgatatttagtcaaagaaagcaatggtggcatgcatgcatatgcatagtcggatagatagagaagttcaaaactcaaagtgaaaaaatattggacgatt 32928708  T
Q  308 cataggcaaccattttcagaccttgtttagttatatcatacgttaggatccgtgtcatcgtgagcttagctcaattggtagaacaatgcataatatatat 407  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  32928707 cataggcaaccattttcagatcttgtttagttatatcatacgttaggatccgcgtcatcgtgagcttagcttaattggtagaacaatgcataatatatat 32928608  T
Q  408 aaggtctagagttcaaacc 426  Q
    ||| ||| |||||||||||    
T  32928607 aagatctggagttcaaacc 32928589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 7938717 - 7938772
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||    
T  7938717 tgtcatcgtgagcttagttcagttggtatgaacaatgcataatatatacaaggtct 7938772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 10498764 - 10498695
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||||  ||||||  ||||||||||||    
T  10498764 gtgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtcatgagttcaaacct 10498695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 1149137 - 1149070
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||||||||||||||| |||||| | ||||||||||||||||  ||||||||| |||| ||||    
T  1149137 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctagggttcgaacc 1149070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 42074096 - 42074151
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||  |||||||    
T  42074096 tgtcatcgtgagcttaactcaactggtatgaacaatgcataatatatgcaaggtct 42074151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 21245792 - 21245854
Alignment:
Q  366 cgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||||||||||| | |||||| | |||||||||||||||| |||||||| | ||||||||||    
T  21245792 cgtgagcttagcttagttggtaaggacaatgcataatatatgtaaggtctggggttcaaacct 21245854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 47377418 - 47377364
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggt-agaacaatgcataatatatataaggt 412  Q
    ||||||||||||||||| |||| ||||| || ||||||||||||||||| |||||    
T  47377418 gtgtcatcgtgagcttaactcagttggtaaggacaatgcataatatatacaaggt 47377364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 916438 - 916499
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  916438 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 916499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 6000728 - 6000683
Alignment:
Q  368 tgagcttagctcaattggtaga-acaatgcataatatatataaggt 412  Q
    ||||||||||||||||| || | |||||||||||||||||||||||    
T  6000728 tgagcttagctcaattgatatagacaatgcataatatatataaggt 6000683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 7868720 - 7868761
Alignment:
Q  365 tcgtgagcttagctcaattggt-agaacaatgcataatatat 405  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  7868720 tcgtgagcttagctcagttggtaagaacaatgcataatatat 7868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 33223866 - 33223907
Alignment:
Q  365 tcgtgagcttagctcaattggtag-aacaatgcataatatat 405  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  33223866 tcgtgagcttagctcagttggtagaaacaatgcataatatat 33223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 43490480 - 43490439
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  43490480 tcgtgagcttagctcagttggtatgaacaatgcataatatat 43490439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 13800667 - 13800727
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| |||||| ||||||||||||||||||  |||||| | ||||| ||||    
T  13800667 gtgagcttagctcagttggtaagaacaatgcataatatatgcaaggtccacagttcgaacc 13800727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 414
Target Start/End: Complemental strand, 38559957 - 38559909
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    |||||| || |||| |||||| |||||||||||||||||||||||||||    
T  38559957 gtgagcgtaactcagttggtatgaacaatgcataatatatataaggtct 38559909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 48076153 - 48076205
Alignment:
Q  361 gtcatcgtgagcttagctcaattggt-agaacaatgcataatatatataaggt 412  Q
    |||||||| ||||||||||||||||| | ||||||||| ||||||| ||||||    
T  48076153 gtcatcgtaagcttagctcaattggtcaaaacaatgcaaaatatatgtaaggt 48076205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 48688108 - 48688160
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggt 412  Q
    ||||| ||||| ||||||||| ||||||  |||||||||||||||| ||||||    
T  48688108 tgtcaccgtgaacttagctcagttggtatgacaatgcataatatatgtaaggt 48688160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 17134123 - 17134173
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtct 414  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  17134123 tcgtgagcttaactcaattggtagagacaatgcataatatatataaggtct 17134173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 54500567 - 54500616
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtc 413  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  54500567 tcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtc 54500616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 413
Target Start/End: Complemental strand, 2587766 - 2587714
Alignment:
Q  362 tcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtc 413  Q
    |||||||||||||||||||||||||| | | |||||||||||||| |||||||    
T  2587766 tcatcgtgagcttagctcaattggtatggataatgcataatatatgtaaggtc 2587714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 50362207 - 50362139
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||| |||||||||||||||| |||||||  ||||||||||||||||  |||||| || ||||||||||    
T  50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccagggttcaaacct 50362139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 427
Target Start/End: Complemental strand, 21317401 - 21317338
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||||||||||||||| |||||||| ||||||||||||||||  ||||||  | ||||||||||    
T  21317401 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtcaggggttcaaacct 21317338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 22164337 - 22164270
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtag-aacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| ||||||| |||||| | ||||||| ||||||||||||||||| |||||||| | |||||||||    
T  22164337 tgtcctcgtgagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaacc 22164270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 52869073 - 52869010
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaa-tgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||| |||||||| |||| ||||||||||||| ||||||  |||||||||||    
T  52869073 tcgtgagcttagctcagttggtagagacaaatgcataatatatacaaggtccggagttcaaacc 52869010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 8734844 - 8734898
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    |||||||||| |||||||||||| ||| | |||||||||||||||| ||||||||    
T  8734844 gtcatcgtgaacttagctcaattagtatggacaatgcataatatatgtaaggtct 8734898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 19588152 - 19588214
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||||||||||| | ||||||||||| ||||  |||||| || |||||||||    
T  19588152 tcgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcaaacc 19588214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 37463515 - 37463561
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||    
T  37463515 tgtcatcgtgagcttagctcggttggtatgaacaatgcataatatat 37463561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 40071035 - 40070969
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||  ||||||   ||||||||||    
T  40071035 gtcatcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaacc 40070969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 10261831 - 10261770
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  10261831 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 10261770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 21562624 - 21562685
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  21562624 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 21562685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 24079902 - 24079841
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  24079902 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 24079841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 26926772 - 26926711
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  26926772 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 26926711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 36569171 - 36569232
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaac 425  Q
    ||||||||||||||||||| ||| ||| |||||||||||||| ||||||   ||||||||||    
T  36569171 tcgtgagcttagctcaattagtatgaaaaatgcataatatatgtaaggttcggagttcaaac 36569232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 42861745 - 42861806
Alignment:
Q  366 cgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||||||||| |||| ||||||| ||||||||||| |||| |||||||  |||||| |||||    
T  42861745 cgtgagcttaactcagttggtaggacaatgcataacatatgtaaggtccggagttcgaacct 42861806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 43330145 - 43330206
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  43330145 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 43330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 51450211 - 51450272
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  51450211 tcgtgagcttagcttagttggtaggacaatgcataagatatgcaaggtccggagttcaaacc 51450272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 414
Target Start/End: Complemental strand, 56497670 - 56497621
Alignment:
Q  366 cgtgagcttagctcaattggt-agaacaatgcataatatatataaggtct 414  Q
    ||||||||||||||||||||| || ||||||||||||||||  |||||||    
T  56497670 cgtgagcttagctcaattggtaaggacaatgcataatatatgcaaggtct 56497621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 7230273 - 7230341
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggt-agaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||| |||||||||||||||| ||||| || ||||||||||||||||  ||||||  | ||||||||||    
T  7230273 tgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacct 7230341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 25999396 - 25999456
Alignment:
Q  366 cgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaac 425  Q
    ||||| ||||||||| |||||||  |||||||||||||||||||||||   ||||||||||    
T  25999396 cgtgaacttagctcagttggtagggacaatgcataatatatataaggttccgagttcaaac 25999456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 29908049 - 29908117
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||| ||||||||||| |||| |||||| | ||||||||||||||||  ||||||  ||||||||||||    
T  29908049 tgtcttcgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccggagttcaaacct 29908117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 32923293 - 32923245
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    ||||||||||| |||| |||||| |||||||||||||||||| ||||||    
T  32923293 tcgtgagcttaactcagttggtatgaacaatgcataatatatgtaaggt 32923245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 50380899 - 50380839
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaa 424  Q
    |||||||||||  ||| |||||| |||||||||||||||||| |||||||  |||||||||    
T  50380899 tcgtgagcttaattcagttggtatgaacaatgcataatatatgtaaggtccggagttcaaa 50380839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 44243871 - 44243933
Alignment:
Q  365 tcgtgagcttagctcaattggtag-aacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||| |||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  44243871 tcgtgagtttagctcagttggtaggaacaatgcataatatatgtaaggtccagagttcaaacc 44243933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 42045440 - 42045373
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||||||||||||||| |||||| | ||||||||||||||||  ||||||| |||||||||||    
T  42045440 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaacc 42045373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 405
Target Start/End: Complemental strand, 50595952 - 50595905
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  50595952 gtgtcatcgtgagcttagctcaattggtatgaacaatgcataaaatat 50595905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 36371103 - 36371054
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtc 413  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  36371103 tcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtc 36371054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 421
Target Start/End: Complemental strand, 3136750 - 3136694
Alignment:
Q  366 cgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttc 421  Q
    |||||||| ||||||||||||| | |||||||||||||||| |||||||||| ||||    
T  3136750 cgtgagctgagctcaattggtaaagacaatgcataatatatgtaaggtctagggttc 3136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 414
Target Start/End: Complemental strand, 12522180 - 12522132
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  12522180 gtgagcttagctcaattggtatgaacaacgcataatatatacaaggtct 12522132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 32497549 - 32497482
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtag-aacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||| |||||| |||| ||||||| |||||||||||||||||  ||||||||| |||||||||    
T  32497549 tgtcttcgttagcttaactcagttggtaggaacaatgcataatatatgcaaggtctagggttcaaacc 32497482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 7925357 - 7925403
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatat 405  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||    
T  7925357 tgtcctcgtgagcttagctcagttggtagagacaatgcataatatat 7925403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 26498055 - 26498109
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    |||||||||||||||||||| |||||| | ||||||||||| |||| ||||||||    
T  26498055 gtcatcgtgagcttagctcagttggtacggacaatgcataaaatatgtaaggtct 26498109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 43356441 - 43356495
Alignment:
Q  372 cttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||| ||| ||||||| |||||||||||||||| |||||| | |||||||||||    
T  43356441 cttagttcagttggtaggacaatgcataatatatgtaaggtttggagttcaaacc 43356495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 7484762 - 7484713
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatatata 408  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||||||    
T  7484762 tgtcctcgtgagcttagctcagctggtagagacaatgcataatatatata 7484713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 25165153 - 25165092
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||| ||| ||||||||||| | |||||||||||||||| |||||||| | ||||||||||    
T  25165153 gtgagtttaactcaattggtatggacaatgcataatatatgtaaggtctcgggttcaaacct 25165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 35473946 - 35473991
Alignment:
Q  361 gtcatcgtgagcttagctcaattggt-agaacaatgcataatatat 405  Q
    |||||||||||||||||||||||||| || | ||||||||||||||    
T  35473946 gtcatcgtgagcttagctcaattggtaaggataatgcataatatat 35473991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 414
Target Start/End: Complemental strand, 38214050 - 38214001
Alignment:
Q  366 cgtgagcttagctcaattggtag-aacaatgcataatatatataaggtct 414  Q
    ||||||||||||||| || |||| ||||||| ||||||||||||||||||    
T  38214050 cgtgagcttagctcagttagtaggaacaatgtataatatatataaggtct 38214001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 45140068 - 45140007
Alignment:
Q  366 cgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||| |||||| | ||||||||||||||||  |||||| |||||| |||||    
T  45140068 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccagagtttaaacc 45140007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 421
Target Start/End: Original strand, 45701326 - 45701383
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttc 421  Q
    ||||||| |||||||| |||||| ||||||||||||| |||| |||||||| ||||||    
T  45701326 tcgtgagtttagctcagttggtatgaacaatgcataaaatatgtaaggtctggagttc 45701383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 48681996 - 48681955
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  48681996 tcgtgagcttagctcagttggtatgaacaatgcataatatat 48681955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 3157780 - 3157732
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| |||||    
T  3157780 tcgtgagcttagctcaattagtttgaacaatgcataatatatacaaggt 3157732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 3573387 - 3573339
Alignment:
Q  365 tcgtgagcttagctcaattggtag-aacaatgcataatatatataaggt 412  Q
    ||||||||||| |||| ||||||| ||||||||||||||||| ||||||    
T  3573387 tcgtgagcttaactcagttggtaggaacaatgcataatatatgtaaggt 3573339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 40411814 - 40411754
Alignment:
Q  367 gtgagcttagctcaattggt-agaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||||    
T  40411814 gtgagcttagctcaattggtaaggacaatacataatgtatgtaaggtccagggttcaaacc 40411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 45677277 - 45677345
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggt-agaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||||| |||||||| | || | ||||||||| |||| |||||| | |||||||||||    
T  45677277 gtgtcatcgtgagcttatctcaattgctaaggataatgcataacatatgtaaggtttggagttcaaacc 45677345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 9384730 - 9384794
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaac 425  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||| ||||||  || ||||||||    
T  9384730 gtcatcatgagtttaactcaattggtagaacaatgcataatatatgtaaggttcagggttcaaac 9384794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 405
Target Start/End: Original strand, 22608522 - 22608566
Alignment:
Q  362 tcatcgtgagcttagctcaattggtaga-acaatgcataatatat 405  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  22608522 tcatcgtgagcttagctcagttggtagagacaatgcataatatat 22608566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 412
Target Start/End: Complemental strand, 28825161 - 28825109
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtag-aacaatgcataatatatataaggt 412  Q
    ||||||||||||||| |||||||| ||| |||||||| |||||||||||||||    
T  28825161 gtcatcgtgagcttaactcaattgatagaaacaatgcttaatatatataaggt 28825109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 30191712 - 30191748
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataat 401  Q
    |||||| ||||||||||||||||||||||||||||||    
T  30191712 tcgtgaacttagctcaattggtagaacaatgcataat 30191748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 346192 - 346125
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||||||||||||||| |||||  ||| |||||||||||||| ||||||| || |||||||||    
T  346192 tgtcctcgtgagcttagctcagttggtttgaataatgcataatatatgtaaggtccagggttcaaacc 346125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 20455883 - 20455930
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  20455883 gtgtcctcgtgagcttagctcaattggtatggacaatgcataatatat 20455930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 7206118 - 7206164
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatat 405  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||    
T  7206118 tgtcctcgtgagcttagctcagttggtagagacaatgcataatatat 7206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 27412899 - 27412849
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtct 414  Q
    ||||||||||| |||| |||||||| |||||||||||||||| ||||||||    
T  27412899 tcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtct 27412849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 32204537 - 32204583
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  32204537 tgtcctcgtgagcttagctcaattggcatgaacaatgcataatatat 32204583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 3708692 - 3708753
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  3708692 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 3708753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 11868724 - 11868663
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  11868724 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 11868663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 21929469 - 21929530
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||| ||||| | ||||||||||| ||||| ||||||  | |||||||||    
T  21929469 tcgtgagcttagctcagttggttggacaatgcataaaatatacaaggtcaggggttcaaacc 21929530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 27244650 - 27244715
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaa 424  Q
    |||| |||||||||||||||| ||| |||  ||||||||||||||||  ||||||||| |||||||    
T  27244650 tgtcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaaggtctagggttcaaa 27244715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 35360117 - 35360056
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  35360117 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 35360056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 41555292 - 41555353
Alignment:
Q  365 tcgtgagcttagctcaattggtag-aacaatgcataatatatataaggtctagagttcaaac 425  Q
    ||||||| ||| |||| ||||||| |||||||||||||| |||||||||| | |||||||||    
T  41555292 tcgtgagtttaactcagttggtaggaacaatgcataatacatataaggtccaaagttcaaac 41555353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 44110945 - 44111010
Alignment:
Q  362 tcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||||||||||||| |||||| ||||| |||||| ||||| ||| |||||| |||||||||    
T  44110945 tcattgtgagcttagctcagttggtaggaacagtgcatagtatatgtaaagtctagggttcaaacc 44111010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 413
Target Start/End: Complemental strand, 7413251 - 7413203
Alignment:
Q  366 cgtgagcttagctcaattggta-gaacaatgcataatatatataaggtc 413  Q
    ||||||||||||||| |||||| | ||||||||||||||||| ||||||    
T  7413251 cgtgagcttagctcagttggtaaggacaatgcataatatatacaaggtc 7413203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 23250381 - 23250321
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||| |||| |||||| ||||||||||||||||||  |||||| || |||||||||    
T  23250381 gtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtccagggttcaaacc 23250321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 29544627 - 29544687
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||||||||| | ||||||||||||||||  ||||||  | |||||||||    
T  29544627 gtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaacc 29544687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 30243248 - 30243296
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggt 412  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| |||||    
T  30243248 tcgtgaacttagctcagttggtagagacaatgcataatatatacaaggt 30243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 412
Target Start/End: Complemental strand, 32957610 - 32957558
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    ||||||||||| |||||||  |||||| |||||||||||||||||| ||||||    
T  32957610 gtcatcgtgagtttagctcggttggtatgaacaatgcataatatatgtaaggt 32957558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 118812 - 118879
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||||||||||||||| |||||  ||||||||||||| |||| |||||||| |||||||||||    
T  118812 tgtcctcgtgagcttagctcagttggtttgaacaatgcataaaatatgtaaggtctggagttcaaacc 118879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 242297 - 242363
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||||| | |||||| ||||||||||||| | ||| ||||||| ||||| |||||    
T  242297 gtcatcgtgagcttagcttatttggtatgaacaatgcataaaacatacaaggtctggagtttaaacc 242363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 122885 - 122939
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  122885 gtcatcgtgagcttaactcaattggtatgaacaatgcataatatatgcaaggtct 122939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 41603059 - 41603121
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||| ||||| ||||||||||| |||||||||||||||||| |||||||| | |||||||||    
T  41603059 tcgtgggcttaactcaattggtatgaacaatgcataatatatgtaaggtctggggttcaaacc 41603121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 10732843 - 10732790
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  10732843 tgtcctcgtgagcttaactcaattggtatgaacaatgcataatatatacaaggt 10732790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 33445563 - 33445616
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  33445563 tgtcctcgtgagcttagctcagttggtaggaacaatgcataatatatacaaggt 33445616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 41625193 - 41625254
Alignment:
Q  366 cgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||| |||||| ||| |||||||||||||| |||||||||| |||| ||||    
T  41625193 cgtgagcttagctcagttggtatgaataatgcataatatatgtaaggtctagggttcgaacc 41625254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 427
Target Start/End: Original strand, 2181126 - 2181189
Alignment:
Q  365 tcgtgagcttagctcaattggtag-aacaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||||||||| || ||||||||| ||||||||||||||||| |||||||| | ||| ||||||    
T  2181126 tcgtgagcttaacttaattggtaggaacaatgcataatatatgtaaggtctggggtttaaacct 2181189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 425
Target Start/End: Original strand, 27191750 - 27191817
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggt-agaacaatgcataatatatataaggtctagagttcaaac 425  Q
    ||||| |||||||||||||||| ||||| |||||||| ||||||||||  |||||||  |||||||||    
T  27191750 gtgtcctcgtgagcttagctcagttggtaagaacaattcataatatatgcaaggtctgaagttcaaac 27191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 39821877 - 39821944
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||| |||||||||||||||| |||||| | ||||||||||||||||  ||||||| | |||||||||    
T  39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaacc 39821944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 6038343 - 6038277
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaac 425  Q
    |||| |||||| ||||||||| ||| || | |||||||||||||||| |||||||| ||||||||||    
T  6038343 tgtcttcgtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaac 6038277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 35103099 - 35103141
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataat 401  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  35103099 tgtcatcgtgagcttagctcagttggtatgaacaatgcataat 35103141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 20665425 - 20665364
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  20665425 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 20665364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 30550788 - 30550727
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  30550788 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 30550727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 37015899 - 37015858
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatat 405  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  37015899 tcgtgagcttagctcagttggtagagacaatgcataatatat 37015858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 37117587 - 37117546
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  37117587 tcgtgagcttagatcaattggtatgaacaatgcataatatat 37117546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 39975488 - 39975537
Alignment:
Q  365 tcgtgagcttagctcaattggt-agaacaatgcataatatatataaggtc 413  Q
    |||| ||||||||||||||||| |||||||| |||||||||| |||||||    
T  39975488 tcgtaagcttagctcaattggtaagaacaatacataatatatgtaaggtc 39975537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 44215537 - 44215476
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  44215537 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 44215476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 412
Target Start/End: Complemental strand, 3456888 - 3456836
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    |||||||||| |||| |||||||| || |||||||||||||||||| ||||||    
T  3456888 gtcatcgtgaacttaactcaattgatatgaacaatgcataatatatgtaaggt 3456836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 3650514 - 3650566
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtag-aacaatgcataatatatataaggt 412  Q
    ||||||||||||||| |||| ||||||| || |||||||||||||| ||||||    
T  3650514 gtcatcgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggt 3650566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 29652239 - 29652279
Alignment:
Q  387 agaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  29652239 agaacaatgcataatatatgcaaggtccagagttcaaacct 29652279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 405
Target Start/End: Original strand, 32878660 - 32878700
Alignment:
Q  366 cgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  32878660 cgtgagcttagctcagttggtaagaacaatgcataatatat 32878700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 36218272 - 36218232
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatat 405  Q
    ||||||||||| |||||||| || |||||||||||||||||    
T  36218272 tcgtgagcttaactcaattgttaaaacaatgcataatatat 36218232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 390
Target Start/End: Complemental strand, 41860521 - 41860489
Alignment:
Q  358 cgtgtcatcgtgagcttagctcaattggtagaa 390  Q
    |||||| ||||||||||||||||||||||||||    
T  41860521 cgtgtcctcgtgagcttagctcaattggtagaa 41860489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 3671818 - 3671884
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||| ||||||||| | |||| ||||||||||||||||||  ||||||| |||||||||||    
T  3671818 gtcatcgtgatcttagctcagtcggtatgaacaatgcataatatatgcaaggtctggagttcaaacc 3671884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 10242474 - 10242540
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||| |||| ||||||||  ||||||||||||||  |||||| || |||||||||    
T  10242474 tgtcatcgtgagcttaactcagttggtagataaatgcataatatatgcaaggtccagggttcaaacc 10242540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 19036164 - 19036103
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||| |||||||||||    
T  19036164 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtctggagttcaaacc 19036103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 20718472 - 20718533
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||| |||||||||||    
T  20718472 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtctggagttcaaacc 20718533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 426
Target Start/End: Complemental strand, 35001200 - 35001132
Alignment:
Q  358 cgtgtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||| ||||||| |||| |||||||| |||||||||||||||| |||||| | |||||||||||    
T  35001200 cgtgtcatcgcgagcttaactcatttggtagagacaatgcataatatatttaaggt-ttgagttcaaacc 35001132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 27993097 - 27993029
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||| ||||||||||| |||| |||||| ||||||||||||| ||||  ||||||||| ||||||||||    
T  27993097 tgtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtctagggttcaaacct 27993029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 36755008 - 36755060
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggt 412  Q
    |||| ||||||||||| |||| ||||||| |||||||||||||||| ||||||    
T  36755008 tgtcctcgtgagcttaactcagttggtaggacaatgcataatatatgtaaggt 36755060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 36760805 - 36760857
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggt 412  Q
    |||| ||||||||||| |||| ||||||| |||||||||||||||| ||||||    
T  36760805 tgtcctcgtgagcttaactcagttggtaggacaatgcataatatatgtaaggt 36760857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 424
Target Start/End: Complemental strand, 42435465 - 42435401
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaa 424  Q
    |||||||||||||||||||| |||||||| || |||||||||||||  ||||||||  |||||||    
T  42435465 gtcatcgtgagcttagctcagttggtagagactatgcataatatatgcaaggtctaatgttcaaa 42435401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 16537603 - 16537536
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||||||||| |||||||| |||||||  | ||||||||||||||| ||||||| | ||||||||||    
T  16537603 gtcatcgtgagtttagctcagttggtagggataatgcataatatatacaaggtctggggttcaaacct 16537536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 16628059 - 16628126
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||||||||| |||||||| |||||||  | ||||||||||||||| ||||||| | ||||||||||    
T  16628059 gtcatcgtgagtttagctcagttggtagggataatgcataatatatacaaggtctggggttcaaacct 16628126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 410
Target Start/End: Original strand, 5526723 - 5526769
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataag 410  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||    
T  5526723 tcgtgagcttagctcagttggtatggacaatgcataatatatataag 5526769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 22327672 - 22327726
Alignment:
Q  361 gtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtct 414  Q
    |||| ||||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  22327672 gtcaacgtgagcttagctcagttcgtaagaacaatgcataatatatgtaaggtct 22327726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 25602910 - 25602956
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggt-agaacaatgcataatatat 405  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  25602910 tgtcatcgtaagcttagctcaattgataagaacaatgcataatatat 25602956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 36803831 - 36803877
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatat 405  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||    
T  36803831 tgtcctcgtgagcttagctcagttggtagagacaatgcataatatat 36803877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 10409941 - 10409994
Alignment:
Q  361 gtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggtct 414  Q
    ||||||||||| |||||||||||| | | | ||||||||||||||| |||||||    
T  10409941 gtcatcgtgagtttagctcaattgatgggataatgcataatatatacaaggtct 10409994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 20763153 - 20763214
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  20763153 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 20763214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 25251509 - 25251570
Alignment:
Q  366 cgtgagcttagctcaattggtagaa-caatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||| |||| |||||| || |||||||||||||||||||||| | | |||||||||    
T  25251509 cgtgagcttaactcagttggtataaacaatgcataatatatataaggtttggggttcaaacc 25251570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 29488719 - 29488780
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  29488719 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 29488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 33232459 - 33232398
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  33232459 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 33232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 34284601 - 34284540
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  34284601 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 34284540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 4061801 - 4061741
Alignment:
Q  367 gtgagcttagctcaattggtagaa-caatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||||||| | | |||||||||| ||||  ||||||| |||||||||||    
T  4061801 gtgagcttagctcaattggttggagcaatgcataaaatatgaaaggtctggagttcaaacc 4061741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 7670427 - 7670495
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||| |||||||||||||||| |||||  ||||||||||||||||||  ||||||  | ||||||||||    
T  7670427 tgtcttcgtgagcttagctcagttggtttgaacaatgcataatatatgcaaggtccggggttcaaacct 7670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 36341125 - 36341065
Alignment:
Q  368 tgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||||||| |||| |||||| ||||||||||||| ||||| ||||||  ||||||||||||    
T  36341125 tgagcttaactcagttggtatgaacaatgcataaaatatacaaggtccggagttcaaacct 36341065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 38374252 - 38374192
Alignment:
Q  367 gtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||||||||||||||||||| | |||||||||| |||||  |||||| || |||||||||    
T  38374252 gtgagcttagctcaattggtatggacaatgcatagtatatgcaaggtccagggttcaaacc 38374192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 43539165 - 43539105
Alignment:
Q  367 gtgagcttagctcaattggtag-aacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| ||| ||| ||||||||||||||||| |||||||  | |||||||||    
T  43539165 gtgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaacc 43539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 45645276 - 45645236
Alignment:
Q  387 agaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  45645276 agaacaatacataatatatgtaaggtctaaagttcaaacct 45645236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 7083055 - 7082993
Alignment:
Q  365 tcgtgagcttagctcaattggt-agaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||||||||| || ||||||||||||||||  ||| ||| |||||||||||    
T  7083055 tcgtgagcttagctcaattggtaaggacaatgcataatatatgcaagatctggagttcaaacc 7082993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 12582289 - 12582230
Alignment:
Q  367 gtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||| | ||||||| ||||||||||| ||||  ||||||| |||||||||||    
T  12582289 gtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtctggagttcaaacc 12582230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 410
Target Start/End: Original strand, 5632132 - 5632178
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataag 410  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  5632132 tcgtgagcttaactcaattggtaggaacaatgtataatatatataag 5632178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 20744136 - 20744198
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||| |||||| | ||||||||||||||||  ||||||| | |||||||||    
T  20744136 tcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaacc 20744198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 247658 - 247719
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  247658 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 247719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 29740475 - 29740520
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatata 404  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||    
T  29740475 tgtcctcgtgagcttagctcaattggtatggacaatgcataatata 29740520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 33938742 - 33938701
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  33938742 tcgtgagcttagctcagttggtatgaacaatgcataatatat 33938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 412
Target Start/End: Original strand, 4826288 - 4826336
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggt 412  Q
    |||||| ||||| |||||||||||| |||||||||||||||| ||||||    
T  4826288 tcgtgaacttagttcaattggtagagacaatgcataatatatgtaaggt 4826336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 8138498 - 8138458
Alignment:
Q  387 agaacaatgcataatatatataaggtctagagttcaaacct 427  Q
    ||||||||||||||||||| |||||||| | ||||||||||    
T  8138498 agaacaatgcataatatatgtaaggtctggggttcaaacct 8138458  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 12256464 - 12256524
Alignment:
Q  354 gatccgtgtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggtct 414  Q
    ||||| |||| |||||||||||||||| ||||| ||| ||||||||| |||| ||| ||||    
T  12256464 gatccctgtcctcgtgagcttagctcagttggttgaataatgcataaaatatgtaaagtct 12256524  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 28592755 - 28592687
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacct 427  Q
    |||| |||||||||||| |||||||| | | |||||||||||||||| |||||||| | |||| |||||    
T  28592755 tgtcctcgtgagcttagttcaattggcaaagacaatgcataatatatgtaaggtctggggttcgaacct 28592687  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 33542869 - 33542829
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatat 405  Q
    |||||| ||| ||||||||||||| ||||||||||||||||    
T  33542869 tcgtgaactttgctcaattggtaggacaatgcataatatat 33542829  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 15889409 - 15889471
Alignment:
Q  365 tcgtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||| |||||||  ||||||||||||||||  ||||||||| |||||||||    
T  15889409 tcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaacc 15889471  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 10199012 - 10199065
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggt 412  Q
    |||| |||||||||||||||| |||||| | |||||||||||||||||||||||    
T  10199012 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatataaggt 10199065  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 6488999 - 6489067
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||||  ||||||| | |||||||||    
T  6488999 gtgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaacc 6489067  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 23422930 - 23422890
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatat 405  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  23422930 tcgtgaacttaactcaattggtagaacaatgcataatatat 23422890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 41939330 - 41939283
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatata 406  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  41939330 tgtcctcgtgagcttagctcaattggtatgaataatgcataatatata 41939283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 6345032 - 6345098
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||| |||||||||||||| ||||| | ||||||||||| ||||| |||||  || |||||||||    
T  6345032 tgtcattgtgagcttagctcagttggttggacaatgcataaaatatacaaggtacagggttcaaacc 6345098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Complemental strand, 27721743 - 27721697
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||    
T  27721743 tgtcctcgtgagcttagctcagttggtaggaacaatgcataatatat 27721697  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 30488918 - 30488984
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaac 425  Q
    ||||||||||||||||| ||| ||| || ||||||||||||||||||| ||||| | | ||||||||    
T  30488918 tgtcatcgtgagcttagttcagttgatatgaacaatgcataatatatacaaggtttggggttcaaac 30488984  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 405
Target Start/End: Complemental strand, 35413352 - 35413314
Alignment:
Q  367 gtgagcttagctcaattggtagaacaatgcataatatat 405  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35413352 gtgagcttaactcagttggtagaacaatgcataatatat 35413314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 19759927 - 19759968
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatat 405  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  19759927 tcgtgagcttagctcaattggtaggtacaatgcataatatat 19759968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 37462110 - 37462171
Alignment:
Q  365 tcgtgagcttagctcaattggtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||| | ||||||| ||||||||||| ||||  ||||||  |||||||||||    
T  37462110 tcgtgagcttagcttagttggtaggacaatgcataaaatatgcaaggtccggagttcaaacc 37462171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 4666542 - 4666510
Alignment:
Q  366 cgtgagcttagctcaattggtagaacaatgcat 398  Q
    ||||||| |||||||||||||||||||||||||    
T  4666542 cgtgagcatagctcaattggtagaacaatgcat 4666510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 413
Target Start/End: Original strand, 26409252 - 26409300
Alignment:
Q  366 cgtgagcttagctcaattggta-gaacaatgcataatatatataaggtc 413  Q
    ||||||||||||||| |||||| | |||||||||||||||| |||||||    
T  26409252 cgtgagcttagctcagttggtatggacaatgcataatatatgtaaggtc 26409300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 29667937 - 29667870
Alignment:
Q  362 tcatcgtgagcttagctcaattggtagaa-caatgcataatatatataa--ggtctagagttcaaacc 426  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||| ||  ||||||| |||||||||    
T  29667937 tcatcgtgaacttaactcaattggtaaaaacaatgcataatatatacaattggtctagggttcaaacc 29667870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 32158510 - 32158478
Alignment:
Q  366 cgtgagcttagctcaattggtagaacaatgcat 398  Q
    ||||||||||||||||||||||| |||||||||    
T  32158510 cgtgagcttagctcaattggtaggacaatgcat 32158478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 36623237 - 36623177
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaa 424  Q
    ||||||||||| |||| ||| || ||| ||||||||||||||  |||||||||||||||||    
T  36623237 tcgtgagcttaactcagttgataagaataatgcataatatatgcaaggtctagagttcaaa 36623177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 42473886 - 42473954
Alignment:
Q  359 gtgtcatcgtgagcttagctcaattg-gtagaacaatgcataatatatataaggtctagagttcaaacc 426  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||||  ||||||  | |||||||||    
T  42473886 gtgtcctcgtgagcttagctcaattgattggaacaatgcataatatatgcaaggtccggggttcaaacc 42473954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 505004 - 505049
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggtagaacaatgcataatatat 405  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  505004 tgtcatcgtgagcttagctcagttggtaggacaatgcataaaatat 505049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 412
Target Start/End: Complemental strand, 5485 - 5437
Alignment:
Q  364 atcgtgagcttagctcaattggtagaacaatgcataatatatataaggt 412  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||| |||||    
T  5485 atcgtgagcttagctcagttggtagaaaaatgcataaaatatacaaggt 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 1241 - 1307
Alignment:
Q  360 tgtcatcgtgagcttagctcaattggta-gaacaatgcataatatatataaggtctagagttcaaac 425  Q
    |||| |||||| ||||||||| ||| || | |||||||||||||||| |||||||| ||||||||||    
T  1241 tgtcttcgtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaac 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 5423 - 5464
Alignment:
Q  365 tcgtgagcttagctcaattggt-agaacaatgcataatatat 405  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  5423 tcgtgagcttagctcagttggtaagaacaatgcataatatat 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 349625 - 349670
Alignment:
Q  365 tcgtgagcttagctcaattggta-gaacaatgcataatatatataa 409  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||    
T  349625 tcgtgagcttagttcaattggtaggaacaatgtataatatatataa 349670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1515 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 426
Target Start/End: Complemental strand, 717 - 657
Alignment:
Q  367 gtgagcttagctcaattggtaga-acaatgcataatatatataaggtctagagttcaaacc 426  Q
    |||||||||||||||||| |||  ||| |||| |||||||| ||||| |||||||||||||    
T  717 gtgagcttagctcaattgatagggacagtgcaaaatatatacaaggtttagagttcaaacc 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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