View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928-Insertion-28 (Length: 1049)

Name: NF4928-Insertion-28
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928-Insertion-28
NF4928-Insertion-28
[»] chr4 (54 HSPs)
chr4 (8-614)||(55262339-55262933)
chr4 (116-614)||(55269044-55269524)
chr4 (811-953)||(55262199-55262345)
chr4 (616-751)||(15186242-15186374)
chr4 (644-750)||(28755645-28755750)
chr4 (618-777)||(19503136-19503289)
chr4 (616-756)||(43944506-43944643)
chr4 (609-751)||(54897300-54897439)
chr4 (9-111)||(55269694-55269796)
chr4 (616-756)||(789580-789717)
chr4 (644-751)||(7768963-7769069)
chr4 (644-751)||(54655931-54656037)
chr4 (650-744)||(4220226-4220319)
chr4 (616-751)||(12356243-12356375)
chr4 (616-751)||(16536047-16536179)
chr4 (617-720)||(24679727-24679827)
chr4 (616-751)||(29591188-29591320)
chr4 (644-775)||(32202514-32202641)
chr4 (644-756)||(32217070-32217180)
chr4 (616-751)||(43202438-43202570)
chr4 (616-756)||(47231922-47232059)
chr4 (617-756)||(3783551-3783687)
chr4 (615-747)||(42815108-42815237)
chr4 (644-747)||(54945837-54945939)
chr4 (615-756)||(4268872-4269010)
chr4 (615-756)||(18067929-18068067)
chr4 (649-751)||(39843937-39844038)
chr4 (615-751)||(4089140-4089273)
chr4 (615-748)||(55882682-55882811)
chr4 (616-751)||(6164093-6164224)
chr4 (616-756)||(52533835-52533972)
chr4 (644-751)||(33108728-33108833)
chr4 (649-756)||(36395129-36395235)
chr4 (649-751)||(37987965-37988066)
chr4 (617-747)||(54054548-54054675)
chr4 (615-720)||(42898831-42898934)
chr4 (620-756)||(50619089-50619222)
chr4 (616-776)||(5091643-5091797)
chr4 (669-751)||(30387189-30387270)
chr4 (646-751)||(53655933-53656037)
chr4 (644-751)||(30154218-30154323)
chr4 (645-743)||(49915185-49915282)
chr4 (616-747)||(46688264-46688397)
chr4 (653-751)||(46148973-46149070)
chr4 (615-711)||(50167589-50167681)
chr4 (646-751)||(31680518-31680622)
chr4 (670-751)||(41265510-41265589)
chr4 (644-688)||(1432659-1432703)
chr4 (683-751)||(39877304-39877371)
chr4 (646-741)||(50603254-50603348)
chr4 (669-743)||(53268770-53268842)
chr4 (694-751)||(8133782-8133838)
chr4 (671-720)||(31517217-31517266)
chr4 (650-751)||(52697083-52697182)
[»] chr5 (28 HSPs)
chr5 (616-751)||(13661807-13661939)
chr5 (616-751)||(35132521-35132652)
chr5 (617-756)||(34650883-34651018)
chr5 (644-747)||(19647717-19647819)
chr5 (617-756)||(11958017-11958153)
chr5 (617-747)||(10069969-10070095)
chr5 (617-781)||(35504267-35504426)
chr5 (618-782)||(20175228-20175387)
chr5 (644-751)||(13470176-13470282)
chr5 (647-756)||(9721657-9721765)
chr5 (616-751)||(10054408-10054539)
chr5 (653-756)||(11846106-11846208)
chr5 (652-751)||(40564459-40564557)
chr5 (617-751)||(6283562-6283693)
chr5 (617-751)||(12506296-12506427)
chr5 (616-751)||(8787338-8787470)
chr5 (647-735)||(31909659-31909746)
chr5 (650-735)||(21547465-21547549)
chr5 (646-720)||(2619642-2619716)
chr5 (646-751)||(39066990-39067095)
chr5 (652-750)||(40057340-40057437)
chr5 (616-751)||(39069380-39069509)
chr5 (644-720)||(4837282-4837358)
chr5 (646-716)||(6284822-6284892)
chr5 (646-751)||(19436893-19436995)
chr5 (671-776)||(10956004-10956105)
chr5 (677-751)||(4268620-4268692)
chr5 (617-678)||(40608662-40608722)
[»] chr3 (45 HSPs)
chr3 (616-782)||(46352633-46352794)
chr3 (644-756)||(22248911-22249022)
chr3 (614-756)||(272217-272356)
chr3 (617-756)||(48725271-48725407)
chr3 (617-751)||(4168183-4168314)
chr3 (645-751)||(858615-858720)
chr3 (645-751)||(41553995-41554100)
chr3 (615-756)||(49893329-49893467)
chr3 (616-751)||(52520680-52520812)
chr3 (644-751)||(40362635-40362741)
chr3 (611-751)||(20923986-20924123)
chr3 (651-751)||(13159929-13160028)
chr3 (617-756)||(39074419-39074554)
chr3 (644-776)||(42964281-42964410)
chr3 (614-751)||(41304002-41304134)
chr3 (617-751)||(43786871-43787002)
chr3 (645-751)||(43269794-43269899)
chr3 (617-751)||(53489879-53490012)
chr3 (646-751)||(7468438-7468542)
chr3 (617-744)||(2119431-2119555)
chr3 (646-782)||(10617310-10617443)
chr3 (649-756)||(2505379-2505485)
chr3 (616-751)||(11308265-11308397)
chr3 (617-756)||(28139309-28139445)
chr3 (646-751)||(50395618-50395721)
chr3 (616-751)||(18014671-18014803)
chr3 (651-751)||(29241669-29241768)
chr3 (671-775)||(33140937-33141038)
chr3 (644-751)||(24488391-24488497)
chr3 (644-751)||(50359241-50359347)
chr3 (642-756)||(42548118-42548231)
chr3 (644-741)||(52246607-52246703)
chr3 (644-751)||(49529321-49529430)
chr3 (647-751)||(50299000-50299103)
chr3 (668-747)||(2362881-2362958)
chr3 (651-751)||(38852246-38852348)
chr3 (647-751)||(2938095-2938198)
chr3 (676-756)||(6842676-6842755)
chr3 (657-751)||(31514829-31514921)
chr3 (646-704)||(52718194-52718252)
chr3 (644-700)||(2391632-2391688)
chr3 (644-700)||(2393393-2393449)
chr3 (651-743)||(41993682-41993773)
chr3 (663-751)||(21010041-21010124)
chr3 (694-751)||(52552549-52552604)
[»] chr6 (35 HSPs)
chr6 (619-776)||(2350654-2350806)
chr6 (616-747)||(20897947-20898075)
chr6 (644-747)||(34477609-34477711)
chr6 (644-776)||(13416991-13417123)
chr6 (616-782)||(7851185-7851346)
chr6 (616-756)||(3515765-3515902)
chr6 (617-751)||(392096-392227)
chr6 (644-751)||(18276670-18276776)
chr6 (616-756)||(1391228-1391364)
chr6 (649-751)||(25165468-25165569)
chr6 (620-756)||(32985243-32985376)
chr6 (644-756)||(26467174-26467285)
chr6 (644-751)||(23402163-23402269)
chr6 (645-751)||(12145172-12145277)
chr6 (642-765)||(11115139-11115258)
chr6 (616-756)||(32929558-32929695)
chr6 (646-751)||(35043917-35044020)
chr6 (617-756)||(21878397-21878533)
chr6 (616-782)||(12525718-12525879)
chr6 (615-756)||(27433490-27433628)
chr6 (650-756)||(28225252-28225356)
chr6 (644-782)||(29451141-29451276)
chr6 (611-735)||(34396598-34396719)
chr6 (617-756)||(2580952-2581088)
chr6 (616-751)||(4215694-4215826)
chr6 (617-776)||(29978233-29978386)
chr6 (614-751)||(31280318-31280452)
chr6 (644-744)||(23629638-23629737)
chr6 (644-751)||(3026064-3026170)
chr6 (661-751)||(961051-961140)
chr6 (644-718)||(13529480-13529554)
chr6 (645-765)||(1840289-1840407)
chr6 (651-776)||(34851881-34852003)
chr6 (619-751)||(9660988-9661117)
chr6 (645-756)||(5323426-5323536)
[»] chr1 (56 HSPs)
chr1 (617-756)||(5694321-5694457)
chr1 (645-751)||(3784768-3784873)
chr1 (616-756)||(51065798-51065935)
chr1 (620-751)||(12072117-12072245)
chr1 (644-756)||(15227764-15227875)
chr1 (617-750)||(17333338-17333467)
chr1 (614-776)||(19031847-19032004)
chr1 (615-756)||(29657769-29657907)
chr1 (645-751)||(47010019-47010124)
chr1 (648-751)||(3097688-3097790)
chr1 (644-751)||(9266783-9266889)
chr1 (616-751)||(18043161-18043293)
chr1 (614-751)||(45431276-45431409)
chr1 (613-747)||(29210409-29210540)
chr1 (619-751)||(38701988-38702117)
chr1 (652-776)||(6770370-6770491)
chr1 (616-751)||(42770045-42770177)
chr1 (613-751)||(48071479-48071613)
chr1 (644-782)||(38162875-38163010)
chr1 (644-751)||(24178518-24178624)
chr1 (649-756)||(30294431-30294537)
chr1 (617-751)||(38335170-38335300)
chr1 (646-756)||(35985671-35985780)
chr1 (642-756)||(36446375-36446487)
chr1 (615-751)||(13961210-13961342)
chr1 (620-756)||(48383161-48383294)
chr1 (642-720)||(15282599-15282677)
chr1 (646-751)||(43286749-43286853)
chr1 (616-756)||(14350327-14350464)
chr1 (616-735)||(30657607-30657723)
chr1 (616-751)||(51368840-51368972)
chr1 (644-751)||(23473519-23473625)
chr1 (616-751)||(29683194-29683327)
chr1 (616-751)||(12306917-12307048)
chr1 (652-751)||(50128227-50128325)
chr1 (649-735)||(8472985-8473070)
chr1 (663-751)||(37315323-37315409)
chr1 (616-716)||(39912368-39912466)
chr1 (644-756)||(41730330-41730444)
chr1 (651-720)||(47532756-47532824)
chr1 (645-721)||(26228219-26228295)
chr1 (644-751)||(52749627-52749733)
chr1 (649-751)||(45449299-45449400)
chr1 (670-751)||(52431632-52431711)
chr1 (647-716)||(35700739-35700808)
chr1 (652-743)||(39497340-39497430)
chr1 (644-751)||(30217785-30217893)
chr1 (668-748)||(37503263-37503341)
chr1 (644-688)||(19011113-19011157)
chr1 (644-761)||(49867454-49867570)
chr1 (646-716)||(3838866-3838936)
chr1 (642-688)||(10976019-10976065)
chr1 (617-716)||(39081803-39081898)
chr1 (617-678)||(52702272-52702332)
chr1 (647-685)||(14881086-14881124)
chr1 (670-751)||(16590271-16590349)
[»] chr8 (47 HSPs)
chr8 (645-782)||(42035007-42035141)
chr8 (617-756)||(34228682-34228818)
chr8 (617-756)||(37373206-37373341)
chr8 (616-756)||(27988549-27988686)
chr8 (616-756)||(28045851-28045988)
chr8 (618-751)||(16888599-16888728)
chr8 (616-751)||(33357184-33357316)
chr8 (616-809)||(4537745-4537931)
chr8 (646-751)||(11112666-11112770)
chr8 (620-756)||(29444190-29444323)
chr8 (651-751)||(16890535-16890634)
chr8 (616-751)||(168465-168597)
chr8 (617-751)||(30675627-30675758)
chr8 (613-751)||(43119213-43119348)
chr8 (616-743)||(16785086-16785209)
chr8 (646-751)||(36730471-36730575)
chr8 (616-756)||(9063102-9063238)
chr8 (616-776)||(4648194-4648348)
chr8 (619-751)||(20831608-20831737)
chr8 (618-756)||(21595848-21595982)
chr8 (644-751)||(40831302-40831408)
chr8 (644-756)||(28626793-28626904)
chr8 (644-751)||(9253957-9254062)
chr8 (615-756)||(12203853-12203990)
chr8 (615-756)||(12448281-12448418)
chr8 (617-751)||(16394116-16394247)
chr8 (646-756)||(2805310-2805419)
chr8 (614-776)||(3930265-3930421)
chr8 (652-744)||(7304580-7304671)
chr8 (649-765)||(10870382-10870496)
chr8 (648-751)||(42433599-42433700)
chr8 (647-720)||(9537909-9537982)
chr8 (620-720)||(13643015-13643113)
chr8 (620-720)||(13743440-13743538)
chr8 (620-720)||(10618021-10618119)
chr8 (649-756)||(32113938-32114045)
chr8 (616-720)||(9278211-9278313)
chr8 (653-747)||(34192809-34192902)
chr8 (646-742)||(17467630-17467725)
chr8 (617-751)||(29235235-29235366)
chr8 (645-688)||(12652656-12652699)
chr8 (670-751)||(22451835-22451914)
chr8 (684-744)||(24843341-24843400)
chr8 (644-761)||(22956731-22956845)
chr8 (673-761)||(30933367-30933453)
chr8 (695-756)||(39406918-39406978)
chr8 (642-686)||(36923782-36923826)
[»] scaffold0674 (1 HSPs)
scaffold0674 (644-747)||(7956-8058)
[»] scaffold0549 (1 HSPs)
scaffold0549 (644-747)||(7313-7415)
[»] chr7 (43 HSPs)
chr7 (644-751)||(30810680-30810786)
chr7 (618-756)||(28587911-28588045)
chr7 (617-751)||(8754640-8754771)
chr7 (616-756)||(24798453-24798589)
chr7 (644-809)||(4628591-4628751)
chr7 (650-765)||(47083086-47083199)
chr7 (613-756)||(47839489-47839628)
chr7 (616-751)||(18485960-18486092)
chr7 (615-782)||(5239283-5239445)
chr7 (616-756)||(29993537-29993674)
chr7 (616-751)||(12218491-12218623)
chr7 (616-751)||(34333283-34333414)
chr7 (616-747)||(34546373-34546501)
chr7 (616-751)||(5729345-5729477)
chr7 (644-751)||(34606286-34606392)
chr7 (611-756)||(24438471-24438613)
chr7 (647-776)||(11686354-11686482)
chr7 (651-751)||(18117175-18117274)
chr7 (614-744)||(27456175-27456301)
chr7 (644-756)||(42044343-42044454)
chr7 (618-756)||(47656981-47657114)
chr7 (646-751)||(7689255-7689359)
chr7 (645-750)||(23363223-23363327)
chr7 (649-756)||(13064926-13065033)
chr7 (617-720)||(1736980-1737081)
chr7 (645-751)||(22739850-22739955)
chr7 (646-751)||(525130-525234)
chr7 (650-751)||(28262062-28262157)
chr7 (646-751)||(43594091-43594195)
chr7 (648-756)||(45045799-45045906)
chr7 (669-744)||(37674166-37674240)
chr7 (617-751)||(18469995-18470126)
chr7 (615-744)||(37631604-37631730)
chr7 (647-751)||(36437405-36437507)
chr7 (645-736)||(4100594-4100684)
chr7 (663-753)||(18220724-18220812)
chr7 (646-751)||(33636479-33636583)
chr7 (646-752)||(4087650-4087753)
chr7 (648-711)||(18220625-18220688)
chr7 (649-756)||(46716668-46716774)
chr7 (650-716)||(3021922-3021988)
chr7 (650-716)||(18220527-18220593)
chr7 (694-751)||(47118044-47118100)
[»] chr2 (41 HSPs)
chr2 (617-756)||(20552931-20553067)
chr2 (612-756)||(31438641-31438782)
chr2 (644-756)||(38590924-38591035)
chr2 (644-782)||(31390037-31390172)
chr2 (616-756)||(30486209-30486346)
chr2 (651-756)||(26387114-26387218)
chr2 (616-743)||(561581-561705)
chr2 (617-756)||(44587902-44588038)
chr2 (617-751)||(43637165-43637295)
chr2 (645-751)||(4381821-4381926)
chr2 (616-756)||(34442582-34442718)
chr2 (646-751)||(22567629-22567733)
chr2 (650-751)||(27584769-27584869)
chr2 (612-756)||(32360919-32361060)
chr2 (644-756)||(22068370-22068480)
chr2 (646-739)||(2898098-2898190)
chr2 (646-751)||(3668168-3668272)
chr2 (615-756)||(6580187-6580325)
chr2 (614-751)||(22887747-22887881)
chr2 (615-747)||(26891722-26891851)
chr2 (616-751)||(27856451-27856583)
chr2 (617-751)||(38296178-38296308)
chr2 (644-751)||(8969462-8969568)
chr2 (647-809)||(13574031-13574187)
chr2 (649-751)||(1859192-1859293)
chr2 (644-744)||(32860127-32860226)
chr2 (645-756)||(11021272-11021382)
chr2 (644-751)||(35851806-35851912)
chr2 (645-751)||(5881243-5881352)
chr2 (647-751)||(4022534-4022636)
chr2 (35-111)||(8300857-8300933)
chr2 (644-751)||(28600992-28601097)
chr2 (645-751)||(5093594-5093699)
chr2 (663-751)||(15079014-15079100)
chr2 (663-750)||(39531868-39531953)
chr2 (646-756)||(25782883-25782989)
chr2 (649-751)||(29102338-29102439)
chr2 (611-751)||(34123080-34123216)
chr2 (228-271)||(8298016-8298059)
chr2 (670-751)||(15146683-15146762)
chr2 (616-676)||(45261902-45261962)
[»] scaffold0021 (1 HSPs)
scaffold0021 (620-756)||(116207-116340)
[»] scaffold0264 (1 HSPs)
scaffold0264 (616-751)||(22960-23092)
[»] scaffold1152 (1 HSPs)
scaffold1152 (613-751)||(674-809)
[»] scaffold0188 (1 HSPs)
scaffold0188 (644-764)||(6153-6271)
[»] scaffold0002 (1 HSPs)
scaffold0002 (651-751)||(146960-147059)
[»] scaffold0038 (1 HSPs)
scaffold0038 (650-756)||(25750-25854)
[»] scaffold0003 (1 HSPs)
scaffold0003 (615-756)||(53735-53873)
[»] scaffold0034 (1 HSPs)
scaffold0034 (620-756)||(95635-95767)
[»] scaffold0045 (2 HSPs)
scaffold0045 (644-751)||(50573-50679)
scaffold0045 (646-720)||(53431-53505)
[»] scaffold0190 (1 HSPs)
scaffold0190 (644-756)||(14921-15032)
[»] scaffold0524 (1 HSPs)
scaffold0524 (645-751)||(851-956)
[»] scaffold0325 (1 HSPs)
scaffold0325 (642-751)||(17526-17633)
[»] scaffold0206 (1 HSPs)
scaffold0206 (646-747)||(11029-11129)
[»] scaffold1266 (1 HSPs)
scaffold1266 (644-751)||(317-423)
[»] scaffold0050 (2 HSPs)
scaffold0050 (644-751)||(69251-69357)
scaffold0050 (645-716)||(33770-33841)
[»] scaffold0014 (1 HSPs)
scaffold0014 (616-756)||(68340-68477)
[»] scaffold0425 (1 HSPs)
scaffold0425 (680-756)||(10771-10846)
[»] scaffold0113 (1 HSPs)
scaffold0113 (652-776)||(40952-41073)
[»] scaffold0263 (1 HSPs)
scaffold0263 (650-742)||(19649-19740)
[»] scaffold0533 (1 HSPs)
scaffold0533 (670-716)||(5090-5136)
[»] scaffold0015 (1 HSPs)
scaffold0015 (647-751)||(74528-74632)
[»] scaffold0007 (1 HSPs)
scaffold0007 (691-744)||(233925-233977)


Alignment Details
Target: chr4 (Bit Score: 442; Significance: 0; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 8 - 614
Target Start/End: Complemental strand, 55262933 - 55262339
Alignment:
Q  8 acaagagcttggtggggagatcactctgcaaccagggccaattcctggccttaacacaaaggtcacttcctttttagatccagatggatggaaaactgta 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55262933 acaagagcttggaggggagatcactctgcaaccagggccaattcctggccttaacacaaaggtcacttcctttttagatccagatggatggaaaactgta 55262834  T
Q  108 agtttgtgtttcctccaaacttccgtacaaaatcttagtggtcgg----tcggtgaacgaccacattacaaatgcatcaatgcctataggtttctaatat 203  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55262833 agtttgtgtttcctccaaactcccgtacaaaaccttagtggtcggtcgttcggtgaacgaccacattacaaatgcatcaatgcctataggtttctaatat 55262734  T
Q  204 catgtttaannnnnnngtgtaggcgttggttgacaatgaggatttcctgaaggaactggagtgaagagcgagctaataacaagaaataaggagcagtcct 303  Q
    |||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||    
T  55262733 catgtttaatttttttgtgtaggcgttggttgacaatgaagatttcctgaaggaactggagtgaagagcgagc---taacaagaaataagtagcagtcct 55262637  T
Q  304 aggtagcgacactagggtagtgcttttgtgtgaacaataaaac--actcgcaatgtttatcggcgatcattatgtttaggaaaatgtttatttttgtgtt 401  Q
    |||||| ||||||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||||            ||||||||| |||||||    
T  55262636 aggtagtgacactagggtagtgc--ttgtgtgaacaataaaacggtctcgcaatgtttatcggcgatcatt------------atgtttattattgtgtt 55262551  T
Q  402 aactttcatgtggttgtgtaataatctattttaaagcacacttaacactcccttttgcatgttaatctactactattattattattttgatttatgatca 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55262550 aactttcatgtggttgtgtaataatctattttaaagcacacttaacact-ccttttgcatgttaatctactactattattaatattttgatttatgatca 55262452  T
Q  502 gtcatatagtgagtttcttttagcaatggaaccacatctcatctcatccaaatttgaagaaatgagatgaaagcatccataatctattatttctatttta 601  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55262451 gtcacatagtgagtttcttttagcaatggaaccacatctcatctcatcccaatttgaagaaatgagatgaaagcatccataatctattatttatatttta 55262352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 116 - 614
Target Start/End: Complemental strand, 55269524 - 55269044
Alignment:
Q  116 tttcctccaaacttccgtacaaaatcttagtggtcggtcggtgaacgaccacattacaaatgcatcaatgcctataggtttctaatatcatgtttaannn 215  Q
    |||||||||||||  ||||||||| ||||||| |||||| ||||| |||||||| ||||||||||||||||||| |||||||||| |||||||| |        
T  55269524 tttcctccaaactctcgtacaaaaccttagtgttcggtcagtgaatgaccacatgacaaatgcatcaatgcctagaggtttctaacatcatgttaatttt 55269425  T
Q  216 nnnngtgtaggcgttggttgacaatgaggatttcctgaaggaactggagtgaagagcgagctaataacaagaaataaggagcagtcctaggtagcgacac 315  Q
        ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| |||||    
T  55269424 ttgtgtgtaggtgttagttgacaatgaagatttcctgaaggaactggagtgaagagcgagctaa---caagaaataagtagcagtcctaggtagtgacac 55269328  T
Q  316 tagggtagtgcttttgtgtgaacaataaaaca--ctcgcaatgtttatcggcgatcattatgtttaggaaaatgtttatttttgtgttaactttcatgtg 413  Q
    |||||||||||||  ||||||||||||||||   |||||||||||||||| |||||| |            ||||||||| | ||||| |||||||||||    
T  55269327 tagggtagtgctt--gtgtgaacaataaaacggtctcgcaatgtttatcgacgatcaatt-----------atgtttattatcgtgtttactttcatgtg 55269241  T
Q  414 gttgtgtaataatctattttaaagcacacttaacactc-ccttttgcatgttaatctactactattattattattttgatttatgatcagtcatatagtg 512  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| | ||||||||||||||| |||| ||| ||    
T  55269240 gttgtgtaataatctattttaaagcacacttaacacactccttctgcatgttaatctactactattattaatcttttgatttatgatctgtcacatattg 55269141  T
Q  513 agtttcttttagcaatggaaccacatctcatctcatccaaatttgaagaaatgagatgaaagcatccataatctattatttctattttatatgcattcat 612  Q
    |||||||||||||||||||||||||||||||| ||     ||||| || ||||||| ||||||| |||||||| |||| |||||||||||||||||||||    
T  55269140 agtttcttttagcaatggaaccacatctcatccca-----atttggaggaatgagacgaaagcaaccataatccattacttctattttatatgcattcat 55269046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 811 - 953
Target Start/End: Complemental strand, 55262345 - 55262199
Alignment:
Q  811 ttcatataaaagtgcatggagta--caaattgatagagatgtgagaaaaggtgaggtagagagtatttgagatgacatg--aatattataaagaaatatt 906  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| |||  || ||||||||||||||||    
T  55262345 ttcatataaaagtgcatggagtatacaaattgatagagatgtgagaaa-ggtgaggtagagagtatttgagatgaaatgaaaagattataaagaaatatt 55262247  T
Q  907 tgaaacgaact-aaataaataaggagaaaatggggatttataaatatt 953  Q
    ||||||||||| |||||||||| ||||||||| | |||||||||||||    
T  55262246 tgaaacgaactaaaataaataaagagaaaatgtgaatttataaatatt 55262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 15186242 - 15186374
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  15186242 agggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttata 15186339  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  15186340 at-aatgtcaaaaacagtttccttttatggtaataa 15186374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 644 - 750
Target Start/End: Original strand, 28755645 - 28755750
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  28755645 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagttagaaacagtttccttttat 28755743  T
Q  744 ggtaata 750  Q
    | |||||    
T  28755744 gataata 28755750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 618 - 777
Target Start/End: Complemental strand, 19503289 - 19503136
Alignment:
Q  618 ggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataat 717  Q
    |||||||||||||||||||| ||   || |||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||| |||||    
T  19503289 ggaaatgctaaccggtgctcccg---ggtactggttaaggatatgaaaaaggaaattatatactagttaatacattgaaattgtgtaattaatttataat 19503193  T
Q  718 aaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaact 777  Q
     ||||||| ||||||||| ||||||| ||||| ||| ||||||||||  |||||||||||    
T  19503192 -aaagtcaaaaacagtttccttttattgtaat-aattcccttttatg-gtatgcttaact 19503136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 616 - 756
Target Start/End: Original strand, 43944506 - 43944643
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | |||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  43944506 agggaaatgctaaccggtgc-ctccgg-ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 43944603  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || || |||| ||||||||| ||||||||||||||| ||||    
T  43944604 at-aatgtcaaaaacagtttccttttatggtaataattccc 43944643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 609 - 751
Target Start/End: Original strand, 54897300 - 54897439
Alignment:
Q  609 tcatattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaatta 708  Q
    ||||||| ||||||||||||||||||| | || |  ||||||||||||||||||| || |||||||||||||||||||||  ||||||||||| ||||||    
T  54897300 tcatatttgggaaatgctaaccggtgcccccggg--gcactggttaaggatatgagaaaggaaattatatagtagttaatgcattgaaattgtataatta 54897397  T
Q  709 attgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||| ||||| ||||||| ||||| ||| |||||||||||||||    
T  54897398 atttataat-aaagtcaaaaacaatttccttttatggtaataa 54897439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 55269796 - 55269694
Alignment:
Q  9 caagagcttggtggggagatcactctgcaaccagggccaattcctggccttaacacaaaggtcacttcctttttagatccagatggatggaaaactgtaa 108  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||| |||  ||| |||||||||||||||||||||||||||||||    
T  55269796 caagagcttggagggaagatcactcggcaaccagggccaattcccggccttaacacaaaagtcgtttcttttttagatccagatggatggaaaactgtaa 55269697  T
Q  109 gtt 111  Q
    |||    
T  55269696 gtt 55269694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 789717 - 789580
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  |||| |||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  789717 agggaaatgctaaccggtgcccccggg--gcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 789620  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || || |||| ||||||||| ||||||||||||||| ||||    
T  789619 at-aatgtcaaaaacagtttccttttatggtaataattccc 789580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 7768963 - 7769069
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| || || | ||||||||| |||||||    
T  7768963 ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aatgttaaaaacagtttccttttat 7769061  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  7769062 ggtaataa 7769069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 54656037 - 54655931
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||     
T  54656037 ggcactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacaattttcttttag 54655939  T
Q  744 ggtaataa 751  Q
    | ||||||    
T  54655938 gataataa 54655931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 650 - 744
Target Start/End: Original strand, 4220226 - 4220319
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||    
T  4220226 ggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacaattttcttttatg 4220319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 12356243 - 12356375
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |  ||||   |||||||||||||||||||| |||||||||||||||||||||  ||||||||| | ||||||||| |||    
T  12356243 agggaaatgctaaccggtgcccctgagat--actggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattatataattaatttata 12356340  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| ||||||||| |||||||| ||||||    
T  12356341 at-aaagtcaaaaacagtttccttttatgataataa 12356375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 16536047 - 16536179
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  |||| | |||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  16536047 agggaaatgctaaccggtgcccccggg--gcacggattaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 16536144  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  16536145 at-aatgtcaaaaacagtttccttttatggtaataa 16536179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 617 - 720
Target Start/End: Complemental strand, 24679827 - 24679727
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  24679827 gggaaatgctaaccggtg-tctcggg--gcactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 24679731  T
Q  717 taaa 720  Q
    ||||    
T  24679730 taaa 24679727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 29591188 - 29591320
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| | || |  |||||||||||| ||||||| | |||||||||||||||||||||  |||||||||||||| |||||| |||    
T  29591188 agggaaatgctaactggtgcccccggg--gcactggttaagaatatgaataaggaaattatatagtagttaatgcattgaaattgtgtacttaatttata 29591285  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| ||||||||| |||||||||||||||    
T  29591286 at-aaagtcaaaaacagtttccttttatggtaataa 29591320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 644 - 775
Target Start/End: Complemental strand, 32202641 - 32202514
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||    
T  32202641 ggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttat 32202543  T
Q  744 ggtaataaatccccttttatgaatatgcttaa 775  Q
    | |||||| |  ||||||||| ||||||||||    
T  32202542 gataataatt--ccttttatg-atatgcttaa 32202514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 644 - 756
Target Start/End: Original strand, 32217070 - 32217180
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||    
T  32217070 ggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttt-ttttat 32217167  T
Q  744 ggtaataaatccc 756  Q
    | |||||| ||||    
T  32217168 gataataattccc 32217180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 43202570 - 43202438
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||| ||||||| |||||||| ||||||||||||||| |||||  ||| ||||||||||||||||| |||    
T  43202570 agggaaatgctaaccggtgcccccggg--gcactagttaagggtatgaaaaaggaaattatatagtaattaatgcattaaaattgtgtaattaatttata 43202473  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| |||||||||||||||||||||||||    
T  43202472 at-aatgtcaaaaacagttttcttttatggtaataa 43202438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 47232059 - 47231922
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || ||| |||||||||||||| |||||| |||||||||||| ||||||||  ||||||||  |||||||||||||||    
T  47232059 agggaaatgctaaccggtgcccccg-gag-cactggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgata 47231962  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| |||||||| |||||| ||||    
T  47231961 at-aaagtcaaaaacagtttccttttatgataataattccc 47231922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 617 - 756
Target Start/End: Complemental strand, 3783687 - 3783551
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  | ||||| ||||||  |||||||||  ||||||||||||||||||||  ||| ||||||| ||||||||||||||    
T  3783687 gggaaatgctaaccggtgc-ctccgg-ggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcattaaaattgtttaattaattgataa 3783590  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||||||||||||||||||||||||| ||||    
T  3783589 t-aaagtcaaaaacagttttcttttatggtaataattccc 3783551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 615 - 747
Target Start/End: Original strand, 42815108 - 42815237
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    |||| ||||||||||||||||||| |||    |||||||||||||||||||| |||||||||||  |||||||| |||||||||| ||||||||||| ||    
T  42815108 taggaaaatgctaaccggtgctctggagt---actggttaaggatatgaaaaaggaaattatatcatagttaatgtattgaaattatgtaattaatttat 42815204  T
Q  715 aataaaagtcagaaacagttt-tcttttatggta 747  Q
    ||| ||||||| ||||||||| ||||||||||||    
T  42815205 aat-aaagtcaaaaacagtttctcttttatggta 42815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 644 - 747
Target Start/End: Complemental strand, 54945939 - 54945837
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||| ||||| |||  ||||||    
T  54945939 ggcactggttaaggatatgaaaaaggaaattatatagcagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacaatttcgttttat 54945841  T
Q  744 ggta 747  Q
    ||||    
T  54945840 ggta 54945837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 615 - 756
Target Start/End: Complemental strand, 4269010 - 4268872
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  ||||||||||||| |||||||| ||||| |||||||||||||||  ||||||||| ||||||||||| ||    
T  4269010 tagggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttat 4268913  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||| || |||| |||||||||  |||||||||||||| ||||    
T  4268912 aat-aatgtcaaaaacagtttctttttatggtaataattccc 4268872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 615 - 756
Target Start/End: Complemental strand, 18068067 - 18067929
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||    
T  18068067 tagggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttat 18067970  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     || || |||| ||| ||||| ||||||||||||||| ||||    
T  18067969 cat-aatgtcaaaaatagtttccttttatggtaataattccc 18067929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 649 - 751
Target Start/End: Original strand, 39843937 - 39844038
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||||||||||||||  ||||||||||||||||||||  ||||||||| ||||||||||| ||||| ||||||| ||||||||| ||||||||||||    
T  39843937 tggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataat-aaagtcaaaaacagtttccttttatggtaa 39844035  T
Q  749 taa 751  Q
    |||    
T  39844036 taa 39844038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 751
Target Start/End: Original strand, 4089140 - 4089273
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| |  | |  |||||| |||||| |||||||| | |||||||||||||||||||  ||||||||||||||||||||| ||    
T  4089140 tagggaaatgctaaccggtgcccctggg--gcactgattaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttat 4089237  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||| || |||| ||||||||| |||||||||||||||    
T  4089238 aat-aatgtcaaaaacagtttccttttatggtaataa 4089273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 748
Target Start/End: Original strand, 55882682 - 55882811
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    |||||||||||||||||||| ||||  | |||||| ||||||||||||||||   ||||||||||||| |||||  ||||||||||||||||||||| ||    
T  55882682 tagggaaatgctaaccggtg-tctccgg-ggcactcgttaaggatatgaaaaaa-aaattatatagtaattaatgcattgaaattgtgtaattaatttat 55882778  T
Q  715 aataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||| ||||||| ||||||||||||||||||||||    
T  55882779 aat-aaagtcaaaaacagttttcttttatggtaa 55882811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 6164093 - 6164224
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||| ||||||||||||| | |  ||||||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||| |||    
T  6164093 agggaaatgataaccggtgctcttggg--gcactggttaaggatatcaaaaga-aaattatatagtagttaatgcattgaaattgtgtaattaatttata 6164189  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||  | ||||||||| |||||||||||||||    
T  6164190 at-aaagcaaaaaacagtttccttttatggtaataa 6164224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 52533972 - 52533835
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||| |||||||||| ||| || | ||||||||||| ||||||||| |||||||||||||||||||||  | ||||||||  |||||||||||||    
T  52533972 agggaaatgttaaccggtgc-ctccag-gacactggttaagaatatgaaaaaggaaattatatagtagttaatgcactgaaattgaataattaattgata 52533875  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||  ||||||||| ||||||||||||||| ||||    
T  52533874 at-aaagtcgaaaacagtttccttttatggtaataattccc 52533835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 33108833 - 33108728
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||||  |||||||| || ||||||||||||||| ||||||| ||||||||| |||||||    
T  33108833 ggcactggttaag-atatgaaaaaggaaattatataatagttaatgcattgaaatagtataattaattgataat-aaagtcaaaaacagtttccttttat 33108736  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  33108735 ggtaataa 33108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 649 - 756
Target Start/End: Original strand, 36395129 - 36395235
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    |||||||  ||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||    
T  36395129 tggttaaaaatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaagcagttttcttttatgataa 36395227  T
Q  749 taaatccc 756  Q
    ||| ||||    
T  36395228 taattccc 36395235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 649 - 751
Target Start/End: Original strand, 37987965 - 37988066
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| || || | ||||||||| ||||||| ||||    
T  37987965 tggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aatgttaaaaacagtttccttttattgtaa 37988063  T
Q  749 taa 751  Q
    |||    
T  37988064 taa 37988066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 617 - 747
Target Start/End: Original strand, 54054548 - 54054675
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || | ||||| |||||||||||||||||  ||||||||||| ||||||||  |||||||| |||||||||||||||||    
T  54054548 gggaaatgctaaccggtgccc-cggg-ggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcattgaaatagtgtaattaattgataa 54054645  T
Q  717 taaaagtcagaaacagttttcttttatggta 747  Q
    | ||||||| ||||| ||| |||||||||||    
T  54054646 t-aaagtcaaaaacaatttccttttatggta 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 615 - 720
Target Start/End: Complemental strand, 42898934 - 42898831
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    |||||||||| ||| ||||||| || || |||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||    
T  42898934 tagggaaatgttaatcggtgct-tccag-ggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttat 42898837  T
Q  715 aataaa 720  Q
    ||||||    
T  42898836 aataaa 42898831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 620 - 756
Target Start/End: Original strand, 50619089 - 50619222
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||| ||||||| || |  |||||| ||||| ||||||||| | |||||||||||||||||||  |||||||||||||| |||||| ||||| |    
T  50619089 aaatgctaactggtgctcccggg--gcactgattaagaatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtacttaatttataat-a 50619185  T
Q  720 aagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||| | ||||||||| ||||||||||||||| ||||    
T  50619186 aagtaaaaaacagtttccttttatggtaataattccc 50619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 616 - 776
Target Start/End: Complemental strand, 5091797 - 5091643
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||| ||||||||| ||| || |  |||||||||||| |||||||||   |||||||||| || ||||| |||| ||||||||||||||||| |||    
T  5091797 agggaaatactaaccggtactcccggg--gcactggttaagaatatgaaaaataaaattatataataattaatatattaaaattgtgtaattaatttata 5091700  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaac 776  Q
    || ||||||| ||||||||| ||||||| ||||| ||| ||||||||||  ||||||||||    
T  5091699 at-aaagtcataaacagtttccttttatagtaat-aattcccttttatg--tatgcttaac 5091643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 669 - 751
Target Start/End: Complemental strand, 30387270 - 30387189
Alignment:
Q  669 gaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  30387270 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatggtaataa 30387189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 53656037 - 53655933
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||| ||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||| ||||| ||||| | ||| | |||| ||||||||    
T  53656037 cacttgttaaggatatgaaaaaagaaattatataatagttaatgtattgaaattgtgtaattaatttataat-aaagttaaaaataattttattttatgg 53655939  T
Q  746 taataa 751  Q
    ||||||    
T  53655938 taataa 53655933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 30154323 - 30154218
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||| ||||| ||| ||| |||    
T  30154323 ggcactagttaag-atatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaaa-tcaaaaacaatttccttatat 30154226  T
Q  744 ggtaataa 751  Q
    | ||||||    
T  30154225 gataataa 30154218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 49915185 - 49915282
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| ||||||||||||||| | || |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| | ||||||||| |||||||    
T  49915185 gcactgattaaggatatgaaaaagaaatttatatagtaattaatgtattgaaattgtgtaattaatttataat-aaagtaaaaaacagtttccttttat 49915282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 46688397 - 46688264
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaag-----ggaaattatatagtagttaatctattgaaattgtgtaattaat 710  Q
    |||||||||||||| ||||| | ||||  ||||||||||||||||||||||      | |||||||| ||||||||||  ||||||||||||||||||||    
T  46688397 agggaaatgctaactggtgcccccgag--gcactggttaaggatatgaaaaattaaagaaaattatacagtagttaatgcattgaaattgtgtaattaat 46688300  T
Q  711 tgataataaaagtcagaaacagttttcttttatggta 747  Q
    | ||||| ||||||| || |||||| |||||||||||    
T  46688299 ttataat-aaagtcaaaagcagtttccttttatggta 46688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 653 - 751
Target Start/End: Original strand, 46148973 - 46149070
Alignment:
Q  653 taaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||||||| |||||||||||| || |||||  ||||||||||||||||||||| ||||| ||||||| ||||| |||  ||||||||||||||    
T  46148973 taagaatatgaaaaaggaaattatataataattaatacattgaaattgtgtaattaatttataat-aaagtcaaaaacaatttctttttatggtaataa 46149070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 615 - 711
Target Start/End: Original strand, 50167589 - 50167681
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaatt 711  Q
    |||||||||||||||||||| ||||| |  ||||||||||| |||||||||| | ||||||||  |||||||||  |||||||||||||||||||||    
T  50167589 tagggaaatgctaaccggtgttctcggg--gcactggttaaagatatgaaaaagaaaattata--gtagttaatgcattgaaattgtgtaattaatt 50167681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 31680622 - 31680518
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||||||||||| |||||||| | || ||| ||| ||||||||  ||||||||||| ||||||||| ||||| ||||||| ||||| ||| |||||||||    
T  31680622 cactggttaagggtatgaaaaagaaagttacataatagttaatgcattgaaattgtataattaatttataat-aaagtcaaaaacaatttccttttatgg 31680524  T
Q  746 taataa 751  Q
    ||||||    
T  31680523 taataa 31680518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 41265510 - 41265589
Alignment:
Q  670 aaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||||||||||||||||  | ||||||||||||||||||| |||  |||| ||| ||||||||||||||||| |||||||    
T  41265510 aaattatatagtagttaatgcagtgaaattgtgtaattaatttata--aaaaatcaaaaacagttttcttttattgtaataa 41265589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 644 - 688
Target Start/End: Complemental strand, 1432703 - 1432659
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaat 688  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  1432703 ggcactggttaaggatatgaaaaaggaaattatataatagttaat 1432659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 683 - 751
Target Start/End: Complemental strand, 39877371 - 39877304
Alignment:
Q  683 gttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||||||  |||||| |||||||    
T  39877371 gttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttcattttatagtaataa 39877304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 646 - 741
Target Start/End: Original strand, 50603254 - 50603348
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    |||||||||||| | || ||| ||||||| |||| || |||||  ||||||||||||||||||||| ||||| || |||| |||||||||| ||||    
T  50603254 cactggttaagggtgtggaaaaggaaattgtataataattaatgcattgaaattgtgtaattaatttataat-aatgtcaaaaacagttttttttt 50603348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 53268770 - 53268842
Alignment:
Q  669 gaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||| ||||||||  ||| ||||||||||||||||| |||  |||||||| ||||| |||||||||||    
T  53268770 gaaattatatattagttaatgcattaaaattgtgtaattaatttata--aaaagtcaaaaacaattttcttttat 53268842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 751
Target Start/End: Original strand, 8133782 - 8133838
Alignment:
Q  694 gaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||    
T  8133782 gaaaatgtgtaattaatttataataaa-gtcaaaaatagttttcttttatggtaataa 8133838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 720
Target Start/End: Original strand, 31517217 - 31517266
Alignment:
Q  671 aattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    ||||||||| ||||||||  |||||||| |||||||||||||||||||||    
T  31517217 aattatataatagttaatgcattgaaatagtgtaattaattgataataaa 31517266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 650 - 751
Target Start/End: Original strand, 52697083 - 52697182
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaat 749  Q
    |||||||||||||||||   |||||||||||||||||||  ||| ||||| | ||| ||||| ||||| ||||||| ||| | ||||| ||||| |||||    
T  52697083 ggttaaggatatgaaaaacaaaattatatagtagttaatacattaaaattatataa-taatttataat-aaagtcaaaaataattttcctttattgtaat 52697180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 9e-42; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 13661807 - 13661939
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  13661807 agggaaatgctaaccggtgcccccg-gag-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgata 13661904  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||||||||||||| |||||||||||||||    
T  13661905 at-aaagtcagaaacagtttccttttatggtaataa 13661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 35132521 - 35132652
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || ||  ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  35132521 agggaaatgctaaccggtgcccccggga--cactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttata 35132618  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| ||||||||||| |||||||||||||    
T  35132619 at-aaagtcaaaaacagttttc-tttatggtaataa 35132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 617 - 756
Target Start/End: Complemental strand, 34651018 - 34650883
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | ||   |||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  34651018 gggaaatgctaaccggtgcccccg---ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 34650922  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | || |||| ||||||||| ||||||||||||||| ||||    
T  34650921 t-aatgtcaaaaacagtttccttttatggtaataattccc 34650883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 644 - 747
Target Start/End: Complemental strand, 19647819 - 19647717
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||| ||||||||| |||||||    
T  19647819 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataat-aaagtcataaacagtttccttttat 19647721  T
Q  744 ggta 747  Q
    ||||    
T  19647720 ggta 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 617 - 756
Target Start/End: Complemental strand, 11958153 - 11958017
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  |||| |||||| ||||| |||| |||||||||||||||||||||  | ||||||||||||||||||||||||    
T  11958153 gggaaatgctaaccggtgcccccggg--gcacaggttaaagatataaaaaaggaaattatatagtagttaatgcaatgaaattgtgtaattaattgataa 11958056  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||||||||| ||||||||||||||| ||||    
T  11958055 t-aaagtcaaaaacagtttccttttatggtaataattccc 11958017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 617 - 747
Target Start/End: Original strand, 10069969 - 10070095
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  10069969 gggaaatgctaaccggtgcccccggg--gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataa 10070065  T
Q  717 taaaagtcagaaacagttttcttttatggta 747  Q
    | ||||||| |||||||||  ||||||||||    
T  10070066 t-aaagtcaaaaacagtttctttttatggta 10070095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 617 - 781
Target Start/End: Complemental strand, 35504426 - 35504267
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || ||  |||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  35504426 gggaaatgctaaccggtgcccccggga--cactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 35504329  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtg 781  Q
    | || |||| ||||||||  ||||||||| ||| ||| ||||||||||  |||||||||| ||||    
T  35504328 t-aatgtcaaaaacagttcccttttatggcaat-aattcccttttatg-gtatgcttaacccgtg 35504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 618 - 782
Target Start/End: Original strand, 20175228 - 20175387
Alignment:
Q  618 ggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataat 717  Q
    ||||||||||||||||| ||||  ||| ||||||||||  |||| ||||  ||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  20175228 ggaaatgctaaccggtg-tctcc-gagacactggttaaaaatataaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 20175325  T
Q  718 aaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
     ||||||| ||||| |||||||||||| |||| ||| ||||||||| ||||||||||||| ||||    
T  20175326 -aaagtcaaaaacaattttcttttatgataat-aattcccttttat-aatatgcttaactagtgc 20175387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 13470176 - 13470282
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||  ||||||||||| ||||||||| ||||| ||||||| ||||||||| |||||||    
T  13470176 ggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcattgaaattgtataattaatttataat-aaagtcaaaaacagtttccttttat 13470274  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  13470275 ggtaataa 13470282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 647 - 756
Target Start/End: Complemental strand, 9721765 - 9721657
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggt 746  Q
    |||||||||| ||||||||| ||||||||||||||| |||||  ||||||||||| ||||||||| ||||| ||||||| |||||||||||||||||| |    
T  9721765 actggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtttaattaatttataat-aaagtcaaaaacagttttcttttatgat 9721667  T
Q  747 aataaatccc 756  Q
    ||||| ||||    
T  9721666 aataattccc 9721657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 10054539 - 10054408
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||| || |||||  ||||||||||||||||||||| |||    
T  10054539 agggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatataataattaatgcattgaaattgtgtaattaatttata 10054442  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  10054441 at-aatgtca-aaacagtttccttttatggtaataa 10054408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 653 - 756
Target Start/End: Original strand, 11846106 - 11846208
Alignment:
Q  653 taaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaa 752  Q
    ||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||  ||||| ||||||||||||||||    
T  11846106 taaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataat-aaagtcaaaagtagtttccttttatggtaataaa 11846204  T
Q  753 tccc 756  Q
    ||||    
T  11846205 tccc 11846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 652 - 751
Target Start/End: Complemental strand, 40564557 - 40564459
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||| |||| ||||||||||||||    
T  40564557 ttaaggatttgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacaatttttttttatggtaataa 40564459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 6283562 - 6283693
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  | |||||| ||||| |||||||||| | |||||||||| || |||||  ||||||||||||||||||||| ||||    
T  6283562 gggaaatgctaaccggtgc-ctccgg-ggcactagttaaagatatgaaaaagaaaattatataataattaatgcattgaaattgtgtaattaatttataa 6283659  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| ||||| |||||||||||||||||||    
T  6283660 t-aaagtcaaaaacaattttcttttatggtaataa 6283693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 12506296 - 12506427
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  ||| |||| ||||||  |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  12506296 gggaaatgctaaccggtgc-ctctggag-cactcgttaagagtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 12506393  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | || |||| ||||||||| ||||||| |||||||    
T  12506394 t-aatgtcaaaaacagtttccttttatagtaataa 12506427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 8787338 - 8787470
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||  | || |  ||| ||||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||||||||| |||    
T  8787338 agggaaatgctaaccggtgtccccggg--gcattggttaagggtatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttata 8787435  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| | ||| ||||||||| |||||||| ||||||    
T  8787436 ataata-tcaaaaacagtttccttttatgataataa 8787470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 647 - 735
Target Start/End: Original strand, 31909659 - 31909746
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttt 735  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||| ||||||| |||||||||    
T  31909659 actggttaaggatattaaaagggaaattatatagtagttaatgcattgaaattgtgtaattgatttataat-aaagtcaaaaacagttt 31909746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 650 - 735
Target Start/End: Complemental strand, 21547549 - 21547465
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttt 735  Q
    |||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  21547549 ggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttt 21547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 646 - 720
Target Start/End: Complemental strand, 2619716 - 2619642
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    |||| |||||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  2619716 cacttgttaaggatatgaaaaagaaaattatttagtagttaatgtattgaaattgtgtaattaatttataataaa 2619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 39067095 - 39066990
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagt-agttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||||||||||||||||||  ||||||||||| | ||||||| |||||||||| ||||||||||| ||||| ||||||| ||||| | | ||||||||    
T  39067095 cactggttaaggatatgaaaaaagaaattatataattagttaatatattgaaattatgtaattaatttataat-aaagtcaaaaacaatatccttttatg 39066997  T
Q  745 gtaataa 751  Q
    |||||||    
T  39066996 gtaataa 39066990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 652 - 750
Target Start/End: Original strand, 40057340 - 40057437
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    ||||||||||||||| ||||||||||||||||||| |  |||||||| || ||||||||| ||||||||| ||| || |||||||||||||| ||||||    
T  40057340 ttaaggatatgaaaaaggaaattatatagtagttagtgcattgaaatagtataattaatttataataaaa-tcaaaagcagttttcttttatagtaata 40057437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 39069380 - 39069509
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||||||||||||||| || || |||||||||||||| |||||||||| |||||||||||||||||||  ||| ||||||||||||||    |||    
T  39069380 agggaaatgctaaccggtgct-tccag-ggcactggttaagggtatgaaaagg-aaattatatagtagttaatgcattaaaattgtgtaatta---tata 39069473  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||  || | ||||| ||| |||||||||||||||    
T  39069474 ataattgtgaaaaacaatttccttttatggtaataa 39069509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 644 - 720
Target Start/End: Original strand, 4837282 - 4837358
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    ||||| ||||||| ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||||||    
T  4837282 ggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaa 4837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 646 - 716
Target Start/End: Original strand, 6284822 - 6284892
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||||||  |||| ||||||||||||||| ||||| |||||||||||| ||||||||| ||||    
T  6284822 cactggttaaggatactaaaaaggaaattatatagtaattaatgtattgaaattgtataattaatttataa 6284892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 19436995 - 19436893
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||| |||||||||||||||| |||||||||||||| |||||   ||||||||||| ||||||||| |||   ||||| | ||| |||||| ||||||||    
T  19436995 cactcgttaaggatatgaaaaaggaaattatatagtggttaaagcattgaaattgtataattaatttata--taaagttaaaaatagtttt-ttttatgg 19436899  T
Q  746 taataa 751  Q
    ||||||    
T  19436898 taataa 19436893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 776
Target Start/End: Original strand, 10956004 - 10956105
Alignment:
Q  671 aattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatg 770  Q
    ||||||| ||||||||||  ||||||||||| ||||||||| |||| ||| |||| ||||| ||| ||||||||||||| |||  ||||||||| |||||    
T  10956004 aattataaagtagttaatgcattgaaattgt-taattaatttataacaaa-gtcaaaaacaatttccttttatggtaat-aatttccttttatg-atatg 10956099  T
Q  771 cttaac 776  Q
    ||||||    
T  10956100 cttaac 10956105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 751
Target Start/End: Original strand, 4268620 - 4268692
Alignment:
Q  677 atagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||||  ||| ||||||||||||||||| |||  |||| | | ||||||||| |||||||||||||||    
T  4268620 atagtagttaatgcattaaaattgtgtaattaatttata--aaaaataaaaaacagtttccttttatggtaataa 4268692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 678
Target Start/End: Complemental strand, 40608722 - 40608662
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggat-atgaaaagggaaattatat 678  Q
    ||||||||||||||||||||| || ||  |||||||||||||| || ||||||||||||||||    
T  40608722 gggaaatgctaaccggtgctcccggga--cactggttaaggataataaaaagggaaattatat 40608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 9e-42; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 616 - 782
Target Start/End: Original strand, 46352633 - 46352794
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  |||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||    
T  46352633 agggaaatgctaaccggtgcccccggg--gcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaattgata 46352730  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    || ||||||||||||||||| ||||||||||||| ||| ||||||||||  |||||||||| |||||    
T  46352731 at-aaagtcagaaacagtttccttttatggtaat-aattcccttttatg-gtatgcttaacccgtgc 46352794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 644 - 756
Target Start/End: Original strand, 22248911 - 22249022
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22248911 ggcactagttaaggatatgaaaaaggaaattatatagtagttattgtattgaaattgtgtaattaattgataat-aaagtcaaaaacagttttcttttat 22249009  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  22249010 ggtaataattccc 22249022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 614 - 756
Target Start/End: Original strand, 272217 - 272356
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||||||||| | || |  |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |    
T  272217 ttagggaaatgctaaccggtgcccccggg--gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattta 272314  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||| ||||||| ||| ||||| ||||||||||||||| ||||    
T  272315 taat-aaagtcaaaaatagtttccttttatggtaataattccc 272356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 48725271 - 48725407
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || | ||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  48725271 gggaaatgctaaccggtgccc-cggg-ggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataa 48725368  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||||||||| ||||||||||||||| ||||    
T  48725369 t-aaagtcaaaaacagtttccttttatggtaataattccc 48725407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 4168183 - 4168314
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  | || ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  4168183 gggaaatgctaaccggtgc-ctccgg-ggaactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 4168280  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| |||||||||||||||||||||||||    
T  4168281 t-aaagtcaaaaacagttttcttttatggtaataa 4168314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 645 - 751
Target Start/End: Original strand, 858615 - 858720
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  858615 gcactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagtcaaaaacagtttccttttatg 858713  T
Q  745 gtaataa 751  Q
    |||||||    
T  858714 gtaataa 858720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 41554100 - 41553995
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  41554100 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatg 41554002  T
Q  745 gtaataa 751  Q
    |||||||    
T  41554001 gtaataa 41553995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 615 - 756
Target Start/End: Original strand, 49893329 - 49893467
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  |||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||  ||    
T  49893329 tagggaaatgctaaccggtgcccccggg--gcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctat 49893426  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||| ||||||| ||||||||| ||||||||||||||| ||||    
T  49893427 aat-aaagtcaaaaacagtttccttttatggtaataattccc 49893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 52520680 - 52520812
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  52520680 agggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 52520777  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  52520778 at-aatgtcaaaaacagtttccttttatggtaataa 52520812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 40362741 - 40362635
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  40362741 ggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcattaaaattgtgtaattaattgataat-aaagtcaaaaacagttttcttttat 40362643  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  40362642 ggtaataa 40362635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 611 - 751
Target Start/End: Original strand, 20923986 - 20924123
Alignment:
Q  611 atattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaat 710  Q
    ||||| ||||||||||||||||||||  |  | |||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  20923986 atatttgggaaatgctaaccggtgcttcc--ggggcactggttaagggtatgaaaaaggaaattatatagtagttaattcattgaaattgtgtaattaat 20924083  T
Q  711 tgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| | ||| ||||||||| |||||| ||||||||    
T  20924084 ttataataata-tcaaaaacagtttccttttaaggtaataa 20924123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 651 - 751
Target Start/End: Original strand, 13159929 - 13160028
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||||    
T  13159929 gttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataat-aaagtcaaaaacagttttctattacggtaata 13160027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 39074419 - 39074554
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  39074419 gggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 39074516  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | || |||| ||||||||| ||||||||||||||| ||||    
T  39074517 t-aatgtca-aaacagtttccttttatggtaataattccc 39074554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 644 - 776
Target Start/End: Complemental strand, 42964410 - 42964281
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||||||||||||  |||||| |||||||||||||  ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  42964410 ggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttcttttat 42964312  T
Q  744 ggtaataaatccccttttatgaatatgcttaac 776  Q
     ||||| ||| | |||||||| |||||||||||    
T  42964311 agtaat-aattcacttttatg-atatgcttaac 42964281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 614 - 751
Target Start/End: Original strand, 41304002 - 41304134
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||||||||| |||  | |||| |||||||||||||||||| ||||||||||||||| |||||  ||||||||  |||||||||||||    
T  41304002 ttagggaaatgctaaccggtgc-ctccgg-ggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaat--tgtaattaattga 41304097  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||||| ||||||||| |||||||||||||||    
T  41304098 taat-aaagtcaaaaacagtttccttttatggtaataa 41304134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 43786871 - 43787002
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  | |||||||||||| | |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  43786871 gggaaatgctaaccggtgc-ctccgg-ggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 43786968  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||| | ||| ||||||||| |||||||||||||||    
T  43786969 taata-tcaaaaacagtttccttttatggtaataa 43787002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 43269899 - 43269794
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||| ||||||||| ||| | ||||||| |||||||     
T  43269899 gcactggttaaggatatgaaaagggaaattacatagtagttaatgcattgaaattatgtaattaatttataataaaa-tcaaacacagtttccttttata 43269801  T
Q  745 gtaataa 751  Q
    |||||||    
T  43269800 gtaataa 43269794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 617 - 751
Target Start/End: Complemental strand, 53490012 - 53489879
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||| |||||| | |  | |||||||||||||| |||||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||||    
T  53490012 gggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataa 53489913  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | || |||| ||||||||| |||||||| ||||||    
T  53489912 t-aatgtcaaaaacagtttccttttatgataataa 53489879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 7468438 - 7468542
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||     
T  7468438 cactggttaaggaaatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataat-aaagtcaaaagcagttttcttttatga 7468536  T
Q  746 taataa 751  Q
    ||||||    
T  7468537 taataa 7468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 617 - 744
Target Start/End: Original strand, 2119431 - 2119555
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||| |||||||||  ||||||  ||||||||||| |||||||||| |||||||||||||||||||||  |||||||||| |||||||||| ||||    
T  2119431 gggaaatgttaaccggtgtcctcgag--gcactggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgagtaattaatttataa 2119528  T
Q  717 taaaagtcagaaacagttttcttttatg 744  Q
    | ||||||| ||||| ||| ||||||||    
T  2119529 t-aaagtcaaaaacaatttccttttatg 2119555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 646 - 782
Target Start/End: Complemental strand, 10617443 - 10617310
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||| |||||||||| |||| |||||||||||||||||||||  ||| ||||||||||||||||| ||||| ||||||| ||||| ||| |||||||||    
T  10617443 cactgattaaggatataaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataat-aaagtcaaaaacaatttccttttatgg 10617345  T
Q  746 taataaatccccttttatgaatatgcttaactcgtgc 782  Q
    |||| ||| ||||||||||  |||||||||| |||||    
T  10617344 taat-aattcccttttatg-gtatgcttaacccgtgc 10617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 649 - 756
Target Start/End: Original strand, 2505379 - 2505485
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||| |||||||||| ||||||||||||||||||| |  ||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||||    
T  2505379 tggttaaagatatgaaaaaggaaattatatagtagttagtgcattgaaattgtgtaattaattcataat-aaagtcaaaaatagtttccttttatggtaa 2505477  T
Q  749 taaatccc 756  Q
    ||| ||||    
T  2505478 taattccc 2505485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 11308397 - 11308265
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||||||||||||| |  || ||  ||||| |||||||| |||||| |||||||||||| ||||||||  ||||||||  |||||||||||||||    
T  11308397 agggaaatgctaaccggtgtttccggga--cactgattaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgata 11308300  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||| ||| ||| ||||| |||||||||||||||    
T  11308299 ataaaa-tcaaaaatagtttccttttatggtaataa 11308265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 28139309 - 28139445
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||| ||||| | | |||  |||||||||||||||||||||  ||||||| ||||||||||||  ||||||||||| ||||||||| ||||    
T  28139309 gggaaatgctaactggtgcccccaaga--cactggttaaggatatgaaaaaagaaattaaatagtagttaatgcattgaaattgtataattaatttataa 28139406  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| || ||| || ||||||||||||||| ||||    
T  28139407 t-aaagtcaaaagcagattccttttatggtaataattccc 28139445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 50395721 - 50395618
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||| ||||||||||| | |||||||| ||||||||||  || |||||||||||||||||||||||| ||||||| ||||| ||| |||||||||    
T  50395721 cactggttagggatatgaaaaagaaaattatacagtagttaatgcatagaaattgtgtaattaattgataat-aaagtca-aaacaatttccttttatgg 50395624  T
Q  746 taataa 751  Q
    ||||||    
T  50395623 taataa 50395618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 18014671 - 18014803
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| | || |  |||||| ||||||||||||||| | |||||||||||||||||||  |||||||||||||||||||   |||    
T  18014671 agggaaatgctaactggtgcccccggg--gcactgattaaggatatgaaaaagtaaattatatagtagttaatgcattgaaattgtgtaattaaactata 18014768  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||| | ||||||||| |||||||| ||||||    
T  18014769 at-aaagttaaaaacagtttccttttatgataataa 18014803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 651 - 751
Target Start/End: Original strand, 29241669 - 29241768
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||| ||||| ||||||| |||||| ||  ||||||| |||||    
T  29241669 gttaaggatatgaaaatggaaattatatagtagttaatgcattgaaattatgtaattaatttataat-aaagtcaaaaacagattctttttatgataata 29241767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 671 - 775
Target Start/End: Original strand, 33140937 - 33141038
Alignment:
Q  671 aattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatg 770  Q
    ||||||||||||||||||  ||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| ||| |||||||||| |||||    
T  33140937 aattatatagtagttaatgcattgaaattgtataattaatttataat-aaagtcaaaagcagttttcttttatggtaat-aattcccttttatg-atatg 33141033  T
Q  771 cttaa 775  Q
    |||||    
T  33141034 cttaa 33141038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 24488391 - 24488497
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||| || | |||| |||||||||||| ||||||||  || ||||| |||||||||||||||||||||| ||| |||||||||  ||||||    
T  24488391 ggcactggttaagaatgtaaaaaaggaaattatataatagttaatgcatggaaatagtgtaattaattgataataaaa-tcaaaaacagtttctttttat 24488489  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  24488490 ggtaataa 24488497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 50359347 - 50359241
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||| || |||||   |||||||||||||||||||  |||||||||| |||||||||  ||||| ||||||| ||||||||||||||| |    
T  50359347 ggcactggttaaggttaagaaaaaaaaaattatatagtagttaatgcattgaaattgggtaattaatatataat-aaagtcaaaaacagttttcttttgt 50359249  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  50359248 ggtaataa 50359241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 642 - 756
Target Start/End: Original strand, 42548118 - 42548231
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    ||||||||| |||| ||||||||||  ||||||||||||||||||||  ||||||||| ||||||||||| ||||| ||||||| ||| | |||  ||||    
T  42548118 gaggcactgcttaaagatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataat-aaagtcaaaaataatttcatttt 42548216  T
Q  742 atggtaataaatccc 756  Q
    |||||||||| ||||    
T  42548217 atggtaataattccc 42548231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 644 - 741
Target Start/End: Original strand, 52246607 - 52246703
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||  ||||||||||| ||||||||| ||||| ||||||| ||||| |||| ||||    
T  52246607 ggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcattgaaattgtataattaatttataat-aaagtcaaaaacaattttttttt 52246703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 49529430 - 49529321
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatata---gtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttt 740  Q
    ||||||| ||||||||||||||| | ||||||||||   |||||||||  ||||||||| ||||||||||| ||||| ||||||| ||||| ||| ||||    
T  49529430 ggcactgattaaggatatgaaaaagaaaattatatactagtagttaatgcattgaaattatgtaattaatttataat-aaagtcaaaaacattttccttt 49529332  T
Q  741 tatggtaataa 751  Q
    |||||||||||    
T  49529331 tatggtaataa 49529321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 647 - 751
Target Start/End: Complemental strand, 50299103 - 50299000
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggt 746  Q
    |||| |||| ||||| |||||| |||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||| |||||||||  ||||||| |    
T  50299103 actgattaaagatataaaaaggaaaattatatagtagttaatgcactgaaattgtgtaattaatttataat-aaagtcaaaaacagtttctttttatgat 50299005  T
Q  747 aataa 751  Q
    |||||    
T  50299004 aataa 50299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 668 - 747
Target Start/End: Original strand, 2362881 - 2362958
Alignment:
Q  668 ggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggta 747  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2362881 ggaaattatata-tagttaatgcattgaaatagtgtaattaattgataataaaa-tcaaaaacagttttcttttatggta 2362958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 651 - 751
Target Start/End: Original strand, 38852246 - 38852348
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagt---taatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggta 747  Q
    ||||||||||| ||||  ||||||||||||||||   ||||  ||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||| ||    
T  38852246 gttaaggatataaaaaatgaaattatatagtagtaattaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttattttatgata 38852344  T
Q  748 ataa 751  Q
    ||||    
T  38852345 ataa 38852348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 647 - 751
Target Start/End: Complemental strand, 2938198 - 2938095
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggt 746  Q
    ||||||||| ||||| |||| | |||||||||||||||||||  | ||||||||||| ||||||| ||||| ||||||| ||||| |||  |||||||||    
T  2938198 actggttaaagatataaaaaagaaaattatatagtagttaatgcactgaaattgtgtgattaatttataat-aaagtcaaaaacaatttcattttatggt 2938100  T
Q  747 aataa 751  Q
    |||||    
T  2938099 aataa 2938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 676 - 756
Target Start/End: Original strand, 6842676 - 6842755
Alignment:
Q  676 tatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||| ||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||| ||||    
T  6842676 tataatagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatggtaataattccc 6842755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 657 - 751
Target Start/End: Original strand, 31514829 - 31514921
Alignment:
Q  657 gatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||   ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||| ||||| |||| |||||| |||||||    
T  31514829 gatatgaaaaataaaattatatagtagttaatgtattaaaattgtgtaattaatttataataaaa-tcaaaaacaatttt-ttttatagtaataa 31514921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 646 - 704
Target Start/End: Original strand, 52718194 - 52718252
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgta 704  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||    
T  52718194 cactggttaaggatatgaaaaaggaaattatatagtagttaatacattaaaattgtgta 52718252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 2391632 - 2391688
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattg 700  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  2391632 ggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2391688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 644 - 700
Target Start/End: Original strand, 2393393 - 2393449
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattg 700  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  2393393 ggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 651 - 743
Target Start/End: Complemental strand, 41993773 - 41993682
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| |||| ||||  ||||||||||||||||||||  ||||||||| ||||||||||| ||||| ||||| | ||||||||| |||||||    
T  41993773 gttaagtatattaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataat-aaagttaaaaacagtttccttttat 41993682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 751
Target Start/End: Original strand, 21010041 - 21010124
Alignment:
Q  663 aaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||||||||||||||||||   ||||||||||| ||||||||| |||  |||||||| ||| |||||  ||||||||||||||    
T  21010041 aaaaaggaaattatatagtagttaa--cattgaaattgtataattaatttata--aaaagtca-aaaaagtttctttttatggtaataa 21010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 751
Target Start/End: Original strand, 52552549 - 52552604
Alignment:
Q  694 gaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||||||||||||||| ||||| ||||||| |||||| | ||||||||||||||||    
T  52552549 gaaattgtgtaattaatttataat-aaagtcaaaaacag-tatcttttatggtaataa 52552604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 4e-41; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 619 - 776
Target Start/End: Original strand, 2350654 - 2350806
Alignment:
Q  619 gaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataata 718  Q
    ||||||||||||||||||| || |  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||     
T  2350654 gaaatgctaaccggtgctcccggg--gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat- 2350750  T
Q  719 aaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaac 776  Q
    ||||||| ||| ||||| ||||||||||||| ||| |||||||||| |||||||||||    
T  2350751 aaagtcaaaaatagtttccttttatggtaat-aattcccttttatg-atatgcttaac 2350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 616 - 747
Target Start/End: Original strand, 20897947 - 20898075
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | | || ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  20897947 agggaaatgctaaccggtgccccc-ag-ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgata 20898044  T
Q  716 ataaaagtcagaaacagttttcttttatggta 747  Q
    || ||||||||||||||||| |||||||||||    
T  20898045 at-aaagtcagaaacagtttccttttatggta 20898075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 644 - 747
Target Start/End: Complemental strand, 34477711 - 34477609
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  34477711 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagtcagaaacagtttccttttat 34477613  T
Q  744 ggta 747  Q
    ||||    
T  34477612 ggta 34477609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 644 - 776
Target Start/End: Complemental strand, 13417123 - 13416991
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataata--aaagtcagaaacagttttctttt 741  Q
    |||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  13417123 ggcactagttaaggatatgaaaaaggaaattatatattagttaatgtattgaaattgtgtaattaatttataataataaagtcaaaaacagttttctttt 13417024  T
Q  742 atggtaataaatccccttttatgaatatgcttaac 776  Q
    |||||||| ||| | ||||||| ||||||||||||    
T  13417023 atggtaat-aattctcttttat-aatatgcttaac 13416991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 616 - 782
Target Start/End: Complemental strand, 7851346 - 7851185
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | | || ||||||||||||||||||||||| | ||||||||||||| |||||  ||| ||||||||||||||||| |||    
T  7851346 agggaaatgctaaccggtgccccc-ag-ggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattaaaattgtgtaattaatttata 7851249  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    || ||||||| ||||||||| ||||||||||||| ||| ||||||||||  ||||||||||||||||    
T  7851248 at-aaagtcaaaaacagtttccttttatggtaat-aattcccttttatg-gtatgcttaactcgtgc 7851185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 616 - 756
Target Start/End: Original strand, 3515765 - 3515902
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | | || |||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  3515765 agggaaatgctaaccggtgccccc-ag-ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 3515862  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || || |||| ||||||||| ||||||||||||||| ||||    
T  3515863 at-aatgtcaaaaacagtttccttttatggtaataattccc 3515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 392096 - 392227
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  392096 gggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 392193  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | || |||| ||||||||| |||||||||||||||    
T  392194 t-aatgtcaaaaacagtttccttttatggtaataa 392227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 18276776 - 18276670
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||| ||||| ||||||| ||||||||| |||||||    
T  18276776 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaatttgtgtaattaatttataat-aaagtcaaaaacagtttccttttat 18276678  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  18276677 ggtaataa 18276670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 1391364 - 1391228
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||||||||||||||||  |   || |||| ||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||| |||    
T  1391364 agggaaatgctaaccggtgctccgg---ggtactgattaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttata 1391268  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| |||||||||||||||||| |||||| ||||    
T  1391267 at-aaagtcaaaaacagttttcttttatgataataattccc 1391228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 649 - 751
Target Start/End: Complemental strand, 25165569 - 25165468
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||    
T  25165569 tggttaaggatatgaaaaaagaaattatatagtagttaatatattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttcttttatgataa 25165471  T
Q  749 taa 751  Q
    |||    
T  25165470 taa 25165468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 620 - 756
Target Start/End: Complemental strand, 32985376 - 32985243
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||| ||||||||| |||| |  ||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| |    
T  32985376 aaatgcaaaccggtgccctcggg--gcattggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-a 32985280  T
Q  720 aagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||| ||||||||| |||||||| |||||| ||||    
T  32985279 aagtcaaaaacagtttccttttatgataataattccc 32985243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 644 - 756
Target Start/End: Complemental strand, 26467285 - 26467174
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||| ||||| |||||||    
T  26467285 ggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaatagtttccttttat 26467187  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  26467186 ggtaataattccc 26467174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 23402163 - 23402269
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||| |||||||| ||||| ||||||| ||||||||| |||||||    
T  23402163 ggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataat-aaagtcaaaaacagtttccttttat 23402261  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  23402262 ggtaataa 23402269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 12145277 - 12145172
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  12145277 gcacttgttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatg 12145179  T
Q  745 gtaataa 751  Q
     ||||||    
T  12145178 ataataa 12145172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 642 - 765
Target Start/End: Complemental strand, 11115258 - 11115139
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||  ||||||||||||||||||||| |||||||   ||| ||| |||||||||||    
T  11115258 gaggcactggttaaggatataaaaaaggaaattatataatagttaatacattgaaattgtgtaattaatttataataa---tcaaaaatagttttctttt 11115162  T
Q  742 atggtaataaatccccttttatga 765  Q
    |||||||| ||| |||||||||||    
T  11115161 atggtaat-aattcccttttatga 11115139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 32929695 - 32929558
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||| ||||||||| |||||||| |||||||||||| || |||||  ||||||||||||||||||||| |||    
T  32929695 agggaaatgctaaccggtgcccccggg--gcaatggttaagggtatgaaaaaggaaattatatattaattaatgcattgaaattgtgtaattaatttata 32929598  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| ||||||||||||||| ||||    
T  32929597 at-aaagtcaaaaacagtttccttttatggtaataattccc 32929558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 35043917 - 35044020
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  35043917 cactggttaaggatatgaaaaaagaaattatatagtagttaattcattgaaattgtgt-attaatttataat-aaagtcaaaaacagttttcttttatgg 35044014  T
Q  746 taataa 751  Q
    ||||||    
T  35044015 taataa 35044020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 617 - 756
Target Start/End: Complemental strand, 21878533 - 21878397
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  | ||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||| | ||||||||| ||||    
T  21878533 gggaaatgctaaccggtgc-ctcccg-ggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatttaattaatttataa 21878436  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| |||||||||  |||||||||||||| ||||    
T  21878435 t-aaagtcaaaaacagtttctttttatggtaataattccc 21878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 616 - 782
Target Start/End: Original strand, 12525718 - 12525879
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | || ||||||||||| |||||||| |||||||||||||||||||||  ||||||| ||||||||||||| |||    
T  12525718 agggaaatgctaaccggtgc-ctccgg-ggtactggttaagggtatgaaaaaggaaattatatagtagttaatacattgaaaatgtgtaattaatttata 12525815  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    || || |||| | |||||||  |||||||||||| ||| |||||||||| |||||||||||| ||||    
T  12525816 at-aatgtcaaacacagtttcattttatggtaat-aattcccttttatg-atatgcttaactagtgc 12525879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 615 - 756
Target Start/End: Original strand, 27433490 - 27433628
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||    
T  27433490 tagggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttat 27433587  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     || || |||| ||| ||||| ||||||||||||||| ||||    
T  27433588 cat-aatgtcaaaaatagtttccttttatggtaataattccc 27433628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 650 - 756
Target Start/End: Original strand, 28225252 - 28225356
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaat 749  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||    
T  28225252 ggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacaattttcttttatggtaat 28225349  T
Q  750 aaatccc 756  Q
    || ||||    
T  28225350 aattccc 28225356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 644 - 782
Target Start/End: Complemental strand, 29451276 - 29451141
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||| | ||||||| |||||||    
T  29451276 ggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaaattataat-aaagtcaaacacagtttccttttat 29451178  T
Q  744 ggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    | |||| ||| ||||||||||  |||||||||| |||||    
T  29451177 gataat-aattcccttttatg-gtatgcttaacccgtgc 29451141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 611 - 735
Target Start/End: Complemental strand, 34396719 - 34396598
Alignment:
Q  611 atattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaat 710  Q
    |||| |||||||||||||||||||| | |  ||  ||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  34396719 atataagggaaatgctaaccggtgcccccagga--cacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaat 34396622  T
Q  711 tgataataaaagtcagaaacagttt 735  Q
    | ||||| ||||||| |||||||||    
T  34396621 ttataat-aaagtcaaaaacagttt 34396598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 2580952 - 2581088
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| || |||  | ||||||||| ||||| |||| |||||||||||||||||||||  ||||||||| ||||||||||| ||||    
T  2580952 gggaaatgctaaccggtgcccttgag--gtactggttaatgatataaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa 2581049  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||| | ||| ||||||||||||||| ||||    
T  2581050 t-aaagtcaaaaataatttccttttatggtaataattccc 2581088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 4215694 - 4215826
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||| |||||||||| | || |  ||||||||||||  |||||||| |||||||||||| ||||||||  ||||||||||||||||||||| |||    
T  4215694 agggaaatgttaaccggtgcccccggg--gcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttata 4215791  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  4215792 at-aatgtcaaaaacagtttccttttatggtaataa 4215826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 617 - 776
Target Start/End: Original strand, 29978233 - 29978386
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  ||  |||| |||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||  ||| ||||    
T  29978233 gggaaatgctaaccggtgc-ctccgga--cactagttaaggatatgaaaaaggaaattatatagtatttaatgtattgaaattatgtaatatatttataa 29978329  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaac 776  Q
    | ||||||| |||||||||  |||||||||||| ||| |||||||||| |||||||||||    
T  29978330 t-aaagtcaaaaacagtttaattttatggtaat-aattcccttttatg-atatgcttaac 29978386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 614 - 751
Target Start/End: Original strand, 31280318 - 31280452
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||||||||||| ||||  |||||| |||||   ||||||| |||||||||||||||||||||  ||||||||||| ||||||||| |    
T  31280318 ttagggaaatgctaaccggtgctcccgag--gcactgattaagagaatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattta 31280415  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| || |||| |||| |||| ||||||| |||||||    
T  31280416 taat-aatgtcaaaaacggtttccttttatagtaataa 31280452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 644 - 744
Target Start/End: Complemental strand, 23629737 - 23629638
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| ||||| ||| |||||||    
T  23629737 ggcactgattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattgtgtaattactttataat-aaagtcaaaaacaatttccttttat 23629639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 3026170 - 3026064
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||| ||||||||  ||||||||| ||||||||||  ||||||||||| ||||||||| ||||| || |||| |||||||||||||||||    
T  3026170 ggcactggttaagggtatgaaaaatgaaattatacagtagttaatgcattgaaattgtataattaatttataat-aatgtcaaaaacagttttcttttat 3026072  T
Q  744 ggtaataa 751  Q
     |||||||    
T  3026071 cgtaataa 3026064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 661 - 751
Target Start/End: Original strand, 961051 - 961140
Alignment:
Q  661 tgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||| |||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||    
T  961051 tgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaattgataat-aaagtcagaaacaatttccttttatgataataa 961140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 644 - 718
Target Start/End: Original strand, 13529480 - 13529554
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataata 718  Q
    |||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  13529480 ggcactggttaaggatgtgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 645 - 765
Target Start/End: Complemental strand, 1840407 - 1840289
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||||||| ||||  ||||||||||| || ||||| |||| ||||||||||||||||| ||||| ||||| | ||||||||| |||| |||    
T  1840407 gcactggttaaggatataaaaaaagaaattatataataattaatgtattaaaattgtgtaattaatttataat-aaagttaaaaacagtttcctttcatg 1840309  T
Q  745 gtaataaatccccttttatga 765  Q
    ||||| ||| |||||||||||    
T  1840308 gtaat-aattcccttttatga 1840289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 651 - 776
Target Start/End: Complemental strand, 34852003 - 34851881
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    ||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||| ||| ||||| ||||||| ||| | ||| ||||||| |||||     
T  34852003 gttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattgatttataat-aaagtcaaaaataatttccttttatagtaat- 34851906  T
Q  751 aatccccttttatgaatatgcttaac 776  Q
    ||| | ||||||| ||||||||||||    
T  34851905 aattctcttttat-aatatgcttaac 34851881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 619 - 751
Target Start/End: Original strand, 9660988 - 9661117
Alignment:
Q  619 gaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataata 718  Q
    ||||||||||||||||| |||| |  ||||  ||||||||||||||||  ||||||| ||| ||||||||  ||||||||||| ||||||||| | |||     
T  9660988 gaaatgctaaccggtgccctcgtg--gcaccagttaaggatatgaaaaaagaaattacataatagttaatgcattgaaattgtataattaatttaaaat- 9661084  T
Q  719 aaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||| | || |||||| |||||||||||||||    
T  9661085 aaagttaaaagcagtttccttttatggtaataa 9661117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 645 - 756
Target Start/End: Original strand, 5323426 - 5323536
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||| ||||| |||| |||| ||||||||||||||| ||||   ||| ||||| ||||||||||| ||||| ||||||| ||||| ||| ||||||||    
T  5323426 gcactgattaagaatataaaaaaggaaattatatagtaattaaagcattaaaattatgtaattaatttataat-aaagtcaaaaacaatttccttttatg 5323524  T
Q  745 gtaataaatccc 756  Q
    ||||||| ||||    
T  5323525 gtaataattccc 5323536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 5694321 - 5694457
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||  | |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  5694321 gggaaatgctaaccggtgc-ctccgg-ggcactggttaaggatataaaaagggaaattatatagtagttaatgcattgaaattgtgtaattaattgataa 5694418  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||||||||| ||||||||||||||| ||||    
T  5694419 t-aaagtcaaaaacagtttccttttatggtaataattccc 5694457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 3784873 - 3784768
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  3784873 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagtcaaaaacaattttcttttatg 3784775  T
Q  745 gtaataa 751  Q
    |||||||    
T  3784774 gtaataa 3784768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 51065935 - 51065798
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||  | || ||  ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| |||    
T  51065935 agggaaatgctaaccggtgtccccggga--cactggttaaggatatgaaaaagtaaattatatagtagttaatgtattgaaattgtgtaattaatttata 51065838  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| ||||||||||||||| ||||    
T  51065837 at-aaagtcaaaaacagtttccttttatggtaataattccc 51065798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 620 - 751
Target Start/End: Complemental strand, 12072245 - 12072117
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||| | || |  |||| ||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||||| |    
T  12072245 aaatgctaaccggtgcccccggg--gcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcattgaaattgtgtaattaattgataat-a 12072149  T
Q  720 aagtcagaaacagttttcttttatggtaataa 751  Q
    |||||| |||||||||||||||||||||||||    
T  12072148 aagtcaaaaacagttttcttttatggtaataa 12072117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 644 - 756
Target Start/End: Original strand, 15227764 - 15227875
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  15227764 ggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataat-aaagtcaaaaacagtttccttttat 15227862  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  15227863 ggtaataattccc 15227875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 617 - 750
Target Start/End: Complemental strand, 17333467 - 17333338
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | ||   ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  17333467 gggaaatgctaaccggtgcccccg---ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattcataa 17333371  T
Q  717 taaaagtcagaaacagttttcttttatggtaata 750  Q
    | ||||||| ||||||||| |||||||| |||||    
T  17333370 t-aaagtcaaaaacagtttccttttatgataata 17333338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 614 - 776
Target Start/End: Complemental strand, 19032004 - 19031847
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||||||||||| || | |||| | |||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||| |    
T  19032004 ttagggaaatgctaaccggtgctc-cggg-ggcattagttaaggatatgaaaaaggaaattatatagtagttaaaacattgaaattgtgtaattaattta 19031907  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaac 776  Q
    |||| ||||||| ||||||||| ||||||||||||| |||  ||||||||| |||||||||||    
T  19031906 taat-aaagtcaaaaacagtttccttttatggtaat-aatttccttttatg-atatgcttaac 19031847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 615 - 756
Target Start/End: Original strand, 29657769 - 29657907
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  ||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  29657769 tagggaaatgctaaccggtgcccccggg--gcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgat 29657866  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||| ||||||| ||||||||| ||||| ||||||||| ||||    
T  29657867 aat-aaagtcaaaaacagtttccttttttggtaataattccc 29657907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 645 - 751
Target Start/End: Original strand, 47010019 - 47010124
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| ||| ||||||||| ||||||||    
T  47010019 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaattcaaaaacagtttccttttatg 47010117  T
Q  745 gtaataa 751  Q
    |||||||    
T  47010118 gtaataa 47010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 648 - 751
Target Start/End: Original strand, 3097688 - 3097790
Alignment:
Q  648 ctggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggta 747  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  3097688 ctggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataat-aaagtcaaaaacagttttcttttatggta 3097786  T
Q  748 ataa 751  Q
    ||||    
T  3097787 ataa 3097790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 9266889 - 9266783
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||    
T  9266889 ggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaattcataat-aaagtcaaaaacagtttccttttat 9266791  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  9266790 ggtaataa 9266783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 18043161 - 18043293
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | |||||||||||||| ||| |||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  18043161 agggaaatgctaaccggtgc-ctccgg-ggcactggttaagggtataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 18043258  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| |||||||||||||||||||||||||    
T  18043259 at-aatgtcaaaaacagttttcttttatggtaataa 18043293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 614 - 751
Target Start/End: Original strand, 45431276 - 45431409
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||||||||| | |   |||  ||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |    
T  45431276 ttagggaaatgctaaccggtgccccc---agggcctgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaattta 45431372  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||||| ||| ||||| |||||||||||||||    
T  45431373 taat-aaagtcaaaaatagtttccttttatggtaataa 45431409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 613 - 747
Target Start/End: Original strand, 29210409 - 29210540
Alignment:
Q  613 attagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattg 712  Q
    ||||||||||||||||||||||| |||  | |||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||||||     
T  29210409 attagggaaatgctaaccggtgc-ctccgg-ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattt 29210506  T
Q  713 ataataaaagtcagaaacagttttcttttatggta 747  Q
    ||||| || |||| ||||||||| |||||||||||    
T  29210507 ataat-aatgtcaaaaacagtttccttttatggta 29210540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 619 - 751
Target Start/End: Complemental strand, 38702117 - 38701988
Alignment:
Q  619 gaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataata 718  Q
    ||||||||||||||||||| || |  ||||||||||||| |||||||| ||||| |||||||||||||||  ||||||||| ||||||||||| |||||     
T  38702117 gaaatgctaaccggtgctcccggg--gcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataat- 38702021  T
Q  719 aaagtcagaaacagttttcttttatggtaataa 751  Q
    || |||| |||||||||||||||||||||||||    
T  38702020 aatgtcaaaaacagttttcttttatggtaataa 38701988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 652 - 776
Target Start/End: Original strand, 6770370 - 6770491
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||  ||||||| |||| |    
T  6770370 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttcattttatgataat-a 6770467  T
Q  752 atccccttttatgaatatgcttaac 776  Q
    || |||||||||| |||||||||||    
T  6770468 attcccttttatg-atatgcttaac 6770491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 42770177 - 42770045
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||||||||| | |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  42770177 agggaaatgctaaccggtgcccccggg--gcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 42770080  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| | ||| ||||||||| |||||||||||||||    
T  42770079 ataata-tcaaaaacagtttccttttatggtaataa 42770045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 613 - 751
Target Start/End: Original strand, 48071479 - 48071613
Alignment:
Q  613 attagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattg 712  Q
    ||||||||||||||||||| |||||  |   || |||||||||||||||| ||| |||||||||||| ||||||||  |||||||||||||||||||||     
T  48071479 attagggaaatgctaaccgatgctccgg---ggtactggttaaggatatgtaaaaggaaattatataatagttaatgcattgaaattgtgtaattaattt 48071575  T
Q  713 ataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||| ||||||| ||||||||| |||||||||||||||    
T  48071576 ataat-aaagtcaaaaacagtttccttttatggtaataa 48071613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 644 - 782
Target Start/End: Original strand, 38162875 - 38163010
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||| |||||||| | |||||||||||||||||||  ||||||||||||||||||||| ||||| || |||| ||||||||| |||||||    
T  38162875 ggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aatgtcaaaaacagtttccttttat 38162973  T
Q  744 ggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    |||||| ||| ||||||||||  |||||||||| |||||    
T  38162974 ggtaat-aattcccttttatg-gtatgcttaacccgtgc 38163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 24178624 - 24178518
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||  ||||| ||||||| || |||||| |||||||    
T  24178624 ggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataat-aaagtcaaaagcagtttccttttat 24178526  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  24178525 ggtaataa 24178518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 649 - 756
Target Start/End: Complemental strand, 30294537 - 30294431
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| || |||| |||||||||  |||||||||||    
T  30294537 tggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aatgtcaaaaacagtttctttttatggtaa 30294439  T
Q  749 taaatccc 756  Q
    ||| ||||    
T  30294438 taattccc 30294431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 38335170 - 38335300
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||||||||| ||| | ||  |||||||||| |||||||||| ||||||||||||||| |||||  |||| |||||||||||||||| ||||    
T  38335170 gggaaatgctaaccggtg-tcttggga--cactggttaaagatatgaaaaaggaaattatatagtaattaatgcattgtaattgtgtaattaatttataa 38335266  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| |||||||||||||||||| ||||||    
T  38335267 t-aaagtcaaaaacagttttcttttatgataataa 38335300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 646 - 756
Target Start/End: Complemental strand, 35985780 - 35985671
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||| |||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||| | ||||||||| |||||||||    
T  35985780 cactgtttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtgaaaaacagtttccttttatgg 35985682  T
Q  746 taataaatccc 756  Q
    |||||| ||||    
T  35985681 taataattccc 35985671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 642 - 756
Target Start/End: Complemental strand, 36446487 - 36446375
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||    
T  36446487 gaggcactggttaagaatataaaaagg-aaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttcctttt 36446390  T
Q  742 atggtaataaatccc 756  Q
    || ||||||| ||||    
T  36446389 atagtaataattccc 36446375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 751
Target Start/End: Original strand, 13961210 - 13961342
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  |||| |||||||||||| ||||   |||||||||||||||||||  ||||||||||||||||||||||||    
T  13961210 tagggaaatgctaaccggtgcccccggg--gcacgggttaaggatataaaaaaa-aaattatatagtagttaatgcattgaaattgtgtaattaattgat 13961306  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||| ||||||| |||||||||  ||||||||||||||    
T  13961307 aat-aaagtcaaaaacagtttcattttatggtaataa 13961342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 620 - 756
Target Start/End: Complemental strand, 48383294 - 48383161
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||||| || |  ||||||||||||||| |||||| | |||||||||   ||||||| |||||||||  ||||||||||||||||| |    
T  48383294 aaatgctaaccggtgctcccggg--gcactggttaaggatgtgaaaaagaaaattatatgaaagttaatgtattgaaataatgtaattaattgataat-a 48383198  T
Q  720 aagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||| ||||||||| ||||||||||||||| ||||    
T  48383197 aagtcaaaaacagtttccttttatggtaataattccc 48383161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 642 - 720
Target Start/End: Complemental strand, 15282677 - 15282599
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  15282677 gaggtactggttaaggatatgaaaaagaaaattatatagtagttaatatattgaaattgtgtaattaatttataataaa 15282599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 43286749 - 43286853
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||||||||||||||| |||||||||||| |||||||| | |||||||| ||||||||||| ||||| ||||||| ||| ||||| ||||||| |    
T  43286749 cactggttaaggatatgaaaaaggaaattatataatagttaatgttttgaaattatgtaattaatttataat-aaagtcaaaaatagtttccttttatag 43286847  T
Q  746 taataa 751  Q
    ||||||    
T  43286848 taataa 43286853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 14350464 - 14350327
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || ||| ||| |||||||| |||||||| ||||||||||| |||||||||  ||| ||||||||||||||||| |||    
T  14350464 agggaaatgctaaccggtgcccccg-gag-caccggttaagggtatgaaaaaggaaattatattgtagttaatgcattaaaattgtgtaattaatttata 14350367  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || || |||| ||||| ||| ||||||||||||||| ||||    
T  14350366 at-aatgtcaaaaacaatttccttttatggtaataattccc 14350327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 616 - 735
Target Start/End: Original strand, 30657607 - 30657723
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||||| || |  ||||| |||||| |||||||||  ||||||||||||||||||||  ||||||||| ||||||||||| |||    
T  30657607 agggaaatgctaaccggtgctcccggg--gcactagttaagcatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttata 30657704  T
Q  716 ataaaagtcagaaacagttt 735  Q
    || ||||||| |||||||||    
T  30657705 at-aaagtcaaaaacagttt 30657723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 51368972 - 51368840
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||| | ||| || || ||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||| |||||| |||    
T  51368972 agggaaatgctaaccggtac-ctccag-ggtactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtagttaatttata 51368875  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||| ||||| ||||||| |||||||    
T  51368874 at-aatgtcaaaaatagtttccttttatagtaataa 51368840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 23473625 - 23473519
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||| |||||||||||||||||| ||| ||||||||| ||||||| |||||||||||| ||||||||| ||||| |||||   || |||||| |||||||    
T  23473625 ggcattggttaaggatatgaaaaaggagattatatagcagttaatgtattgaaattgtataattaatttataat-aaagtttaaagcagtttccttttat 23473527  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  23473526 ggtaataa 23473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 29683194 - 29683327
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaag-ggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    |||||||||||||||||||| | || |  ||||||||||| ||||| ||||  |||||||||||||||||||||  |||||||| || ||||||||| ||    
T  29683194 agggaaatgctaaccggtgcccccggg--gcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaatcgtataattaatttat 29683291  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||| ||||||| |||||||||  |||||| |||||||    
T  29683292 aat-aaagtcaaaaacagtttcattttatagtaataa 29683327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 12306917 - 12307048
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | ||| || ||||| |||| ||||| | ||||||||| |||||||||  ||||||||||||||||||||| |||    
T  12306917 agggaaatgctaaccggtgc-ctctgg-ggctctagttaatgatacgaaaaagaaaattatat-gtagttaatacattgaaattgtgtaattaatttata 12307013  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| |||||| || |||||||||||||||    
T  12307014 at-aaagtcaaaaacagattccttttatggtaataa 12307048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 652 - 751
Target Start/End: Complemental strand, 50128325 - 50128227
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||||||| | |||||| ||||||||||||  ||||||||||||||||||||| ||||| ||||| | || ||||||  ||||||||||||||    
T  50128325 ttaaggatatgaaaaagaaaattacatagtagttaatgcattgaaattgtgtaattaatttataat-aaagttaaaagcagtttcattttatggtaataa 50128227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 649 - 735
Target Start/End: Complemental strand, 8473070 - 8472985
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttt 735  Q
    ||||||||||||| |||| |||||||||||| ||||||||  ||| ||||||||||||||||| ||||| ||||||| |||||||||    
T  8473070 tggttaaggatataaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataat-aaagtcaaaaacagttt 8472985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 663 - 751
Target Start/End: Complemental strand, 37315409 - 37315323
Alignment:
Q  663 aaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| |||||||||||||||||||||  ||||||||| ||||||||||| |||  |||||||| | |||||||||||||||| ||||||    
T  37315409 aaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttata--aaaagtcaaagacagttttcttttatgctaataa 37315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 716
Target Start/End: Complemental strand, 39912466 - 39912368
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||| ||||||| || |||| |  |||||| |||||||||| ||||||||||||||||| ||||||||  ||||||||||||| ||||||| |||    
T  39912466 agggaaatgttaaccggcgcactcggg--gcactgattaaggatataaaaagggaaattatatactagttaatgcattgaaattgtgtgattaatttata 39912369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 644 - 756
Target Start/End: Original strand, 41730330 - 41730444
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtag---ttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttt 740  Q
    ||||| ||||||| |||||||||  |||||||||||||||   |||||  ||||||||||| ||||||||| ||||| ||||||| ||||||||| ||||    
T  41730330 ggcacgggttaagaatatgaaaaaagaaattatatagtagtaattaatgcattgaaattgtttaattaatttataat-aaagtcaaaaacagtttccttt 41730428  T
Q  741 tatggtaataaatccc 756  Q
    |||| |||||| ||||    
T  41730429 tatgataataattccc 41730444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 651 - 720
Target Start/End: Complemental strand, 47532824 - 47532756
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  47532824 gttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataataaa 47532756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 645 - 721
Target Start/End: Original strand, 26228219 - 26228295
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaa 721  Q
    |||||||||||||| || ||||  ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||    
T  26228219 gcactggttaaggagataaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaaa 26228295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 52749627 - 52749733
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||| ||||||| |||||||||| |||||||||||| |||||||| |||||||||||| || | |||| | ||| ||||| | ||||| |||| ||||||    
T  52749627 ggcattggttaaagatatgaaaaaggaaattatataatagttaatgtattgaaattgtatactaaatttacaat-aaagttaaaaacaatttttttttat 52749725  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  52749726 ggtaataa 52749733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 649 - 751
Target Start/End: Complemental strand, 45449400 - 45449299
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||| ||||| |||| | |||||||||||||||||||  ||| |||| |||||||||| | ||||| ||||||| || |||||| ||||||||||||    
T  45449400 tggttaaagatataaaaaagaaaattatatagtagttaatgcattaaaatagtgtaattaaattataat-aaagtcaaaagcagtttccttttatggtaa 45449302  T
Q  749 taa 751  Q
    |||    
T  45449301 taa 45449299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 52431632 - 52431711
Alignment:
Q  670 aaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||  ||| |||| || || |||||||||||||||||||    
T  52431632 aaattatatagtagttaatgcattgaaattgtgtaattaatttata--aaatgtcaaaagcaattttcttttatggtaataa 52431711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 647 - 716
Target Start/End: Complemental strand, 35700808 - 35700739
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||  |||| |||||||||| ||||||||||  ||||||||||||||||||||| ||||    
T  35700808 actggttaaggatactaaaaaggaaattatacagtagttaatacattgaaattgtgtaattaatttataa 35700739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 652 - 743
Target Start/End: Original strand, 39497340 - 39497430
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||| | |||||||||||||||||||  ||| ||||| | ||||||||| ||||| ||||||| ||| | |||||||||||    
T  39497340 ttaaggatatgaaaaagaaaattatatagtagttaatgcattaaaattatataattaatttataat-aaagtcaaaaataattttcttttat 39497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 30217785 - 30217893
Alignment:
Q  644 ggcactggttaaggatatgaaaag--ggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    |||||||| ||||||||||||||   || ||||| | ||||||||||  ||| ||||| | ||||||||| |||||||| |||| ||| |||||||||||    
T  30217785 ggcactggctaaggatatgaaaaaaagggaattagagagtagttaatgcatttaaattatttaattaatttataataaa-gtcaaaaatagttttctttt 30217883  T
Q  742 atggtaataa 751  Q
    ||||||||||    
T  30217884 atggtaataa 30217893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 668 - 748
Target Start/End: Original strand, 37503263 - 37503341
Alignment:
Q  668 ggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||  |||| ||| ||| | ||| ||||||||||||    
T  37503263 ggaaattatatagtagttaatacattgaaattgtgtaattaatttata--aaaaatcaaaaatattttccttttatggtaa 37503341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 644 - 688
Target Start/End: Complemental strand, 19011157 - 19011113
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaat 688  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  19011157 ggcacgggttaaggatatgaaaaaggaaattatatagtagttaat 19011113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 644 - 761
Target Start/End: Original strand, 49867454 - 49867570
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaa-ttatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttta 742  Q
    |||||||||||| ||||  ||||  |||| |||||||||| ||||| | ||||||||||||||||||||  ||  |||||||||||| | |||  |||||    
T  49867454 ggcactggttaatgatactaaaaaagaaagttatatagtaattaatgttttgaaattgtgtaattaatt--tacaaaaagtcagaaaaaatttcatttta 49867551  T
Q  743 tggtaataaatcccctttt 761  Q
    | ||||||||| |||||||    
T  49867552 tagtaataaattccctttt 49867570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 716
Target Start/End: Complemental strand, 3838936 - 3838866
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||| |||  |||| |||||||||||| ||||||||  ||| ||||||||||||||||| ||||    
T  3838936 cactggttaagcatactaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataa 3838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 10976065 - 10976019
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagttaat 688  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||    
T  10976065 gaggcacttgttaaggatatgaaaaaggagattatatagtagttaat 10976019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 617 - 716
Target Start/End: Original strand, 39081803 - 39081898
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||||||||| || ||   ||||||||||||| |||  ||||  ||||||||||| |||||||| |||||||||| | ||||||||| ||||    
T  39081803 gggaaatgctaaccggtgttc-cg---ggcactggttaagcatactaaaaatgaaattatatactagttaatgtattgaaattttataattaatttataa 39081898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 678
Target Start/End: Complemental strand, 52702332 - 52702272
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggat-atgaaaagggaaattatat 678  Q
    ||||||||||||||||||||| |  | |||||||||||||||| || ||||||||||||||||    
T  52702332 gggaaatgctaaccggtgctccc--ggggcactggttaaggataataaaaagggaaattatat 52702272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 647 - 685
Target Start/End: Complemental strand, 14881124 - 14881086
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagtt 685  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  14881124 actggttaaggatatgaaaaaggaaattatataatagtt 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 751
Target Start/End: Complemental strand, 16590349 - 16590271
Alignment:
Q  670 aaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||  | ||||| |||| ||||||||||||||||| ||||  || |||||||||| |||||||||||| ||||||    
T  16590349 aaattatataacaattaatgtatt-aaattgtgtaattaatttataa--aatgtcagaaacaattttcttttatgataataa 16590271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 4e-38; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 645 - 782
Target Start/End: Complemental strand, 42035141 - 42035007
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||    
T  42035141 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacaattttcttttatg 42035043  T
Q  745 gtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    ||||| ||| ||||||||||  |||||||||| |||||    
T  42035042 gtaat-aattcccttttatg-gtatgcttaacacgtgc 42035007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 34228682 - 34228818
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || | ||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  34228682 gggaaatgctaaccggtgccc-cggg-ggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataa 34228779  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||||||||| ||||||||||||||| ||||    
T  34228780 t-aaagtcaaaaacagtttccttttatggtaataattccc 34228818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 37373206 - 37373341
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | ||   | ||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  37373206 gggaaatgctaaccggtgcccccg---gacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaattgataa 37373302  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||  ||||||||||||||||||||||||| ||||    
T  37373303 t-aaagtcgaaaacagttttcttttatggtaataattccc 37373341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 27988686 - 27988549
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | ||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||| |||    
T  27988686 agggaaatgctaaccggtgc-ctccgg-ggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttata 27988589  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| ||||||||||||||| ||||    
T  27988588 at-aaagtcaaaaacagtttccttttatggtaataattccc 27988549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 28045988 - 28045851
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | ||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||||||| |||    
T  28045988 agggaaatgctaaccggtgc-ctccgg-ggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttata 28045891  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| ||||||||||||||| ||||    
T  28045890 at-aaagtcaaaaacagtttccttttatggtaataattccc 28045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 618 - 751
Target Start/End: Complemental strand, 16888728 - 16888599
Alignment:
Q  618 ggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataat 717  Q
    |||||||||||||||||| | ||   ||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  16888728 ggaaatgctaaccggtgcccccg---ggcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 16888632  T
Q  718 aaaagtcagaaacagttttcttttatggtaataa 751  Q
     ||||||| ||||||||| |||||||||||||||    
T  16888631 -aaagtcaaaaacagtttccttttatggtaataa 16888599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 33357316 - 33357184
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| | || ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  33357316 agggaaatgctaactggtgcccccg-gag-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 33357219  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| ||||||||| |||||||||||||||    
T  33357218 at-aaagtcaaaaacagtttccttttatggtaataa 33357184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 616 - 809
Target Start/End: Complemental strand, 4537931 - 4537745
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | |||||||||||||||||| |||  |||||||||||||||||||||  ||||||||| |||||||||||||||    
T  4537931 agggaaatgctaaccggtgc-ctccgg-ggcactggttaaggatataaaataggaaattatatagtagttaatgcattgaaattatgtaattaattgata 4537834  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtgcactaagaggcaccgggttagcaggacc 809  Q
    || ||||||| ||||||||| ||||||||||||| ||| ||||||||||  ||||||||||  |||| |  ||||||||| |||||||||||||    
T  4537833 at-aaagtcaaaaacagtttccttttatggtaat-aattcccttttatg-gtatgcttaacctgtgc-cccagaggcacc-ggttagcaggacc 4537745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 11112666 - 11112770
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||     
T  11112666 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttcttttatga 11112764  T
Q  746 taataa 751  Q
    ||||||    
T  11112765 taataa 11112770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 620 - 756
Target Start/End: Complemental strand, 29444323 - 29444190
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    ||||| |||||||||||| || |  |||||| ||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||| ||||| |    
T  29444323 aaatgttaaccggtgctcccggg--gcactgattaaggatatgaaaaaggaaattatatagtagttaacgcattgaaattgtgtaattaatttataat-a 29444227  T
Q  720 aagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  29444226 aagtcaaaaacagttttcttttatggtaataattccc 29444190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 651 - 751
Target Start/End: Complemental strand, 16890634 - 16890535
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  16890634 gttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagtcaaaaacagtttccttttatggtaata 16890536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 168465 - 168597
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |||  | |||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  168465 agggaaatgctaaccggtgc-ctccgg-ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 168562  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  168563 at-aatgtcaaaaacagtttccttttatggtaataa 168597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 617 - 751
Target Start/End: Complemental strand, 30675758 - 30675627
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  30675758 gggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 30675661  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | || |||| ||||||||| |||||||||||||||    
T  30675660 t-aatgtcaaaaacagtttccttttatggtaataa 30675627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 613 - 751
Target Start/End: Original strand, 43119213 - 43119348
Alignment:
Q  613 attagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattg 712  Q
    ||||||||||||||||||||||| |||| |  |||||| |||| |||||||||| | |||||||||||||||||||  ||||||||||| |||||||||     
T  43119213 attagggaaatgctaaccggtgccctcggg--gcactgattaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaattt 43119310  T
Q  713 ataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||| ||||||| |||||||||||||||||||| ||||    
T  43119311 ataat-aaagtcaaaaacagttttcttttatggtgataa 43119348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 616 - 743
Target Start/End: Original strand, 16785086 - 16785209
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||||||||||||||||  |   |||||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||| |||    
T  16785086 agggaaatgctaaccggtgctccag---ggcactggttaaggatatgaaaaaagaaattatatagcagttaatgtattgaaattgtgtaattaatttata 16785182  T
Q  716 ataaaagtcagaaacagttttcttttat 743  Q
    || ||||||| ||||||||| |||||||    
T  16785183 at-aaagtcaaaaacagtttccttttat 16785209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 36730471 - 36730575
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  36730471 cactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatgg 36730569  T
Q  746 taataa 751  Q
    ||||||    
T  36730570 taataa 36730575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 9063238 - 9063102
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||||||||||||| || || ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||| |||||||| |||    
T  9063238 agggaaatgctaaccggtg-tcccg-gag-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatcgtgcaattaatttata 9063142  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||| ||||||||||||||||||| ||||    
T  9063141 at-aaagtcaaaaacaattttcttttatggtaataattccc 9063102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 616 - 776
Target Start/End: Original strand, 4648194 - 4648348
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||   ||  | ||||||| ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  4648194 agggaaatgctaaccggtg---tcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttata 4648290  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaac 776  Q
    || || |||| |||||||||  ||| |||||||| ||| |||||||||| |||||||||||    
T  4648291 at-aatgtcaaaaacagtttcttttgatggtaat-aattcccttttatg-atatgcttaac 4648348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 619 - 751
Target Start/End: Complemental strand, 20831737 - 20831608
Alignment:
Q  619 gaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataata 718  Q
    ||||||||||||||||| | || ||  ||||||||||||||||||||| |||||||||||||||||||||  |||||||| || ||||||||| |||||     
T  20831737 gaaatgctaaccggtgcccccggga--cactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatagtataattaatttataat- 20831641  T
Q  719 aaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||| || |||||| |||||||||||||||    
T  20831640 aaagtcaaaagcagtttccttttatggtaataa 20831608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 618 - 756
Target Start/End: Original strand, 21595848 - 21595982
Alignment:
Q  618 ggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataat 717  Q
    |||||||||||||||||| | ||   |||||||||||||| |||||||| ||||||||||||| |||||||  ||||||||||||||||||||| |||||    
T  21595848 ggaaatgctaaccggtgcccccg---ggcactggttaagggtatgaaaaaggaaattatataggagttaatgcattgaaattgtgtaattaatttataat 21595944  T
Q  718 aaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     || |||| ||||||||| ||||||||||| ||| ||||    
T  21595945 -aatgtcaaaaacagtttccttttatggtattaattccc 21595982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 40831302 - 40831408
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||| |||||||||| | |||||||||||||||||||  ||||||||||| ||||||||| ||||| ||||||| ||||| |||||||||||    
T  40831302 ggcactggttaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataat-aaagtcaaaaacaattttcttttat 40831400  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  40831401 ggtaataa 40831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 644 - 756
Target Start/End: Original strand, 28626793 - 28626904
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||||||| |||||||||  ||||||    
T  28626793 ggcaccggttaaggatgtgaaaaaggaaattatatagtagttaatgtattgaaattgtgtgattaatttataat-aaagtcaaaaacagtttctttttat 28626891  T
Q  744 ggtaataaatccc 756  Q
    | |||||| ||||    
T  28626892 gataataattccc 28626904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 9254062 - 9253957
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||||||||||||  |||||| |||||||||||||  ||||||||||||||||||| ||||||| ||||||| ||||||||| |||||||    
T  9254062 ggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaa-tgataat-aaagtcaaaaacagtttccttttat 9253965  T
Q  744 ggtaataa 751  Q
     |||||||    
T  9253964 agtaataa 9253957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 615 - 756
Target Start/End: Original strand, 12203853 - 12203990
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | ||   || || |||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||||||||| ||    
T  12203853 tagggaaatgctaaccggtgcccccg---ggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttat 12203949  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||| || |||| ||||||||| |||||||| |||||| ||||    
T  12203950 aat-aatgtcaaaaacagtttccttttatgataataattccc 12203990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 615 - 756
Target Start/End: Original strand, 12448281 - 12448418
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | ||   || || |||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||||||||| ||    
T  12448281 tagggaaatgctaaccggtgcccccg---ggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttat 12448377  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||| || |||| ||||||||| |||||||| |||||| ||||    
T  12448378 aat-aatgtcaaaaacagtttccttttatgataataattccc 12448418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 617 - 751
Target Start/End: Complemental strand, 16394247 - 16394116
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  ||||||||||||||| |||||| | |||||||||| ||||||||  ||||||||  ||||||||||||||||    
T  16394247 gggaaatgctaaccggtgcccccggg--gcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatgtaattaattgataa 16394150  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| ||||||||| |||||||| ||||||    
T  16394149 t-aaagtcaaaaacagtttccttttatgctaataa 16394116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 756
Target Start/End: Complemental strand, 2805419 - 2805310
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||   ||||| ||||||| || |||||| |||||||||    
T  2805419 cactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaacctataat-aaagtcaaaagcagtttccttttatgg 2805321  T
Q  746 taataaatccc 756  Q
    |||||| ||||    
T  2805320 taataattccc 2805310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 614 - 776
Target Start/End: Complemental strand, 3930421 - 3930265
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    ||||||||||||||| |||||| | ||   |||||| |||||  ||||||||  |||||||||||||||||||||  |||||| ||||||||||||||||    
T  3930421 ttagggaaatgctaatcggtgcccccg---ggcactagttaataatatgaaagaggaaattatatagtagttaatgcattgaagttgtgtaattaattga 3930325  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaac 776  Q
    |||| ||||||| ||||||||| ||||| || |||| |||  ||||||||| |||||||||||    
T  3930324 taat-aaagtcaaaaacagtttccttttttgataat-aatttccttttatg-atatgcttaac 3930265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 7304671 - 7304580
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  7304671 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatg 7304580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 649 - 765
Target Start/End: Original strand, 10870382 - 10870496
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||| ||||| |||| | |||||||||| ||||||||  ||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  10870382 tggttaatgatataaaaaagaaaattatataatagttaatacattgaaattgtgtaattaatttataataaaa-tcaaaaacagtttccttttatggtaa 10870480  T
Q  749 taaatccccttttatga 765  Q
    | ||| |||||||||||    
T  10870481 t-aattcccttttatga 10870496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 648 - 751
Target Start/End: Complemental strand, 42433700 - 42433599
Alignment:
Q  648 ctggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggta 747  Q
    ||||||||| |||  |||| |||||||||||| ||||||||  ||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||    
T  42433700 ctggttaagcatactaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttata--aaaagtcaaaaacagttttcttttatggta 42433603  T
Q  748 ataa 751  Q
    ||||    
T  42433602 ataa 42433599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 647 - 720
Target Start/End: Complemental strand, 9537982 - 9537909
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  9537982 actggttaaggatatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaa 9537909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 620 - 720
Target Start/End: Original strand, 13643015 - 13643113
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||| | || |  |||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| ||||||||||| |||||||    
T  13643015 aaatgctaaccggtgcccccggg--gcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataa 13643112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 620 - 720
Target Start/End: Original strand, 13743440 - 13743538
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||| | || |  |||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| ||||||||||| |||||||    
T  13743440 aaatgctaaccggtgcccccggg--gcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataa 13743537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 620 - 720
Target Start/End: Original strand, 10618021 - 10618119
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||| ||| || ||||| ||||||||||||||||| | |||||||||||||||||||  | | |||||||||||||||||||||||||    
T  10618021 aaatgctaaccggtgc-ctctag-ggcacaggttaaggatatgaaaaagaaaattatatagtagttaatgcaattaaattgtgtaattaattgataataa 10618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 649 - 756
Target Start/End: Original strand, 32113938 - 32114045
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttt-tcttttatggta 747  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||| ||||| ||||| | |||||||||  |||||||| ||    
T  32113938 tggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtttaattaatttataat-aaagtaaaaaacagtttcccttttatgata 32114036  T
Q  748 ataaatccc 756  Q
    |||| ||||    
T  32114037 ataattccc 32114045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 720
Target Start/End: Original strand, 9278211 - 9278313
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| ||| || | |||| ||||| |||||||||| |||||||||||| ||||||||  ||||||||||||||||||||| |||    
T  9278211 agggaaatgctaactggtgc-ctc-agggacactcgttaaagatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttata 9278308  T
Q  716 ataaa 720  Q
    |||||    
T  9278309 ataaa 9278313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 653 - 747
Target Start/End: Original strand, 34192809 - 34192902
Alignment:
Q  653 taaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggta 747  Q
    |||| ||||||||| |||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||||||| ||| | |||| ||||||||||    
T  34192809 taagaatatgaaaaaggaaattatatactagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaataattttattttatggta 34192902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 646 - 742
Target Start/End: Original strand, 17467630 - 17467725
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttta 742  Q
    |||| ||||| |||||||||| |||||||||  |||| |||||  ||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||    
T  17467630 cactagttaatgatatgaaaaaggaaattatgcagtaattaatgcattgaaattgtgtaattaattgataataaaa-tcaaaaacaatttcctttta 17467725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 29235235 - 29235366
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||||||||| || || ||| || || |||||||||| ||||  ||||||||||||||||||||  ||| || |||||||||||||| ||||    
T  29235235 gggaaatgctaaccggtgttcccg-gag-cattgattaaggatataaaaaaagaaattatatagtagttaatgcattaaatttgtgtaattaatttataa 29235332  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||| ||| ||| || || |||||||| ||||||    
T  29235333 taaaa-tcaaaaataggttccttttatgataataa 29235366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 645 - 688
Target Start/End: Original strand, 12652656 - 12652699
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaat 688  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  12652656 gcactggttaaggatatgaaaaaggaaattatatagtagttaat 12652699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 22451835 - 22451914
Alignment:
Q  670 aaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||||||||| |||||||  ||||||||||||||||||||| |||  |||||||| ||| || || |||||||||||||||    
T  22451835 aaattatatagcagttaatgcattgaaattgtgtaattaatttata--aaaagtcaaaaatagcttccttttatggtaataa 22451914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 684 - 744
Target Start/End: Complemental strand, 24843400 - 24843341
Alignment:
Q  684 ttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||    
T  24843400 ttaatctattgaaattgtgtaattaatttataat-aaagtcaaaatcagtttccttttatg 24843341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 644 - 761
Target Start/End: Original strand, 22956731 - 22956845
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||||  ||| |||| |||| | |||| |||||||||  ||| ||||| ||||||||||| ||||| || |||| ||||||||| |||||||    
T  22956731 ggcactggttaagagtataaaaaaggaa-tcatatggtagttaatacattaaaattatgtaattaatttataat-aatgtcaaaaacagtttccttttat 22956828  T
Q  744 ggtaataaatcccctttt 761  Q
    ||||| |||| |||||||    
T  22956829 ggtaa-aaattccctttt 22956845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 673 - 761
Target Start/End: Complemental strand, 30933453 - 30933367
Alignment:
Q  673 ttatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaatcccctttt 761  Q
    |||||||||| |||||  ||||||||||||||||||||| |||  |||||| | ||||| |||||||||| | ||||||  ||||||||    
T  30933453 ttatatagtaattaatgcattgaaattgtgtaattaatttata--aaaagttaaaaacatttttcttttacgataataatgcccctttt 30933367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 695 - 756
Target Start/End: Original strand, 39406918 - 39406978
Alignment:
Q  695 aaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||||||||||||||||| ||||| ||||||| ||||||||| |||||||| |||||| ||||    
T  39406918 aaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatgataataattccc 39406978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 686
Target Start/End: Complemental strand, 36923826 - 36923782
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagtta 686  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  36923826 gaggcactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 644 - 747
Target Start/End: Complemental strand, 8058 - 7956
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  8058 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagtcagaaacagtttccttttat 7960  T
Q  744 ggta 747  Q
    ||||    
T  7959 ggta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 644 - 747
Target Start/End: Original strand, 7313 - 7415
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  7313 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-aaagtcagaaacagtttccttttat 7411  T
Q  744 ggta 747  Q
    ||||    
T  7412 ggta 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 5e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 30810680 - 30810786
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  30810680 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttcttttat 30810778  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  30810779 ggtaataa 30810786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 618 - 756
Target Start/End: Original strand, 28587911 - 28588045
Alignment:
Q  618 ggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataat 717  Q
    |||||||||||||||||| | ||   | ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  28587911 ggaaatgctaaccggtgcccccg---gacactggttaaggatatgaaaaaggaaattatatagtagtcaatgtattgaaattgtgtaattaatttataat 28588007  T
Q  718 aaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     ||||||| ||||| ||||||||||||||||||| ||||    
T  28588008 -aaagtcaaaaacaattttcttttatggtaataattccc 28588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 617 - 751
Target Start/End: Complemental strand, 8754771 - 8754640
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| || | ||| |||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  8754771 gggaaatgctaaccggtgccctgg-gag-cactggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 8754674  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| |||||||||| ||||||||||||||    
T  8754673 t-aaagtcaaaaacagttttgttttatggtaataa 8754640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 24798589 - 24798453
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | ||   |||||| ||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  24798589 agggaaatgctaaccggtgcccccg---ggcacttgttgaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 24798493  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| ||||||||||||||| ||||    
T  24798492 at-aaagtcaaaaacagtttccttttatggtaataattccc 24798453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 644 - 809
Target Start/End: Original strand, 4628591 - 4628751
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  4628591 ggcaccggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtttaattaatttataat-aaagtcagaaacagtttacttttat 4628689  T
Q  744 ggtaataaatccccttttatgaatatgcttaactcgtgcactaagaggcaccgggttagcaggacc 809  Q
    |||||| ||| ||||||||||  ||||||||||  |||| || || |||||| |||||||||||||    
T  4628690 ggtaat-aattcccttttatg-gtatgcttaaccagtgc-cttaggggcacc-ggttagcaggacc 4628751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 765
Target Start/End: Original strand, 47083086 - 47083199
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaat 749  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||    
T  47083086 ggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaattgataat-aaagttaaaaacagtttccttttatggtaat 47083184  T
Q  750 aaatccccttttatga 765  Q
     ||| |||||||||||    
T  47083185 -aattcccttttatga 47083199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 613 - 756
Target Start/End: Original strand, 47839489 - 47839628
Alignment:
Q  613 attagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattg 712  Q
    ||||||||||||||||||||||   ||  | || |||||||||||||||||||| |||| ||||||| ||||||||  |||||||||||||||||||||     
T  47839489 attagggaaatgctaaccggtg---tcccggggtactggttaaggatatgaaaaaggaatttatataatagttaatacattgaaattgtgtaattaattt 47839585  T
Q  713 ataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||||| ||||||| ||||||||| ||||||||||||||| ||||    
T  47839586 ataat-aaagtcaaaaacagtttccttttatggtaataattccc 47839628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 18485960 - 18486092
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  |||||||||||||||||  ||| ||||||||||||||| ||||| |||||||||||||||||||||| |||    
T  18485960 agggaaatgctaaccggtgcccccggg--gcactggttaaggatattgaaaaggaaattatatagtaattaatgtattgaaattgtgtaattaatttata 18486057  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||| | ||||||||| |||||||||||||||    
T  18486058 at-aaagttaaaaacagtttccttttatggtaataa 18486092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 615 - 782
Target Start/End: Original strand, 5239283 - 5239445
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| |||  ||| |||||||||| | |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||    
T  5239283 tagggaaatgctaaccggtgc-ctccggag-cactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttat 5239380  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    ||| || |||| |||||||||  |||||||||||| ||| ||||||||||  ||||||||||| ||||    
T  5239381 aat-aatgtcaaaaacagtttctttttatggtaat-aattcccttttatg-gtatgcttaacttgtgc 5239445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 29993674 - 29993537
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| | || |  |||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  29993674 agggaaatgctaacgggtgcccccggg--gcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 29993577  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| || || ||| ||||||||||||||| ||||    
T  29993576 at-aaagtcaaaatcaatttccttttatggtaataattccc 29993537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 12218623 - 12218491
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||||| |||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  12218623 agggaaatgctaaccggtgcccccggg--gcactggataagtatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 12218526  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||| | | ||| ||||| |||||||||||||||    
T  12218525 ataaaa-taaaaaatagtttccttttatggtaataa 12218491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 34333283 - 34333414
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  ||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||| |||    
T  34333283 agggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttata 34333380  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  34333381 at-aatgtca-aaacagtttccttttatggtaataa 34333414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 34546501 - 34546373
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||| ||| | ||||  | || ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  34546501 agggaaatgctaaccgatgcccccgag--gtaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 34546404  T
Q  716 ataaaagtcagaaacagttttcttttatggta 747  Q
     | ||||||| ||||||||| |||||||||||    
T  34546403 gt-aaagtcaaaaacagtttacttttatggta 34546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 5729345 - 5729477
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||| ||||||||| || || ||| ||||||||||||||||||||| |||||||||||| |||||||| |||||||||  |||||||||||||||    
T  5729345 agggaaatgttaaccggtgttcccg-gag-cactggttaaggatatgaaaaaggaaattatataatagttaatgtattgaaataatgtaattaattgata 5729442  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| ||| | ||||||||||| |||||||    
T  5729443 at-aaagtcaaaaataattttcttttatagtaataa 5729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 34606286 - 34606392
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||| |||||||| ||||| ||||||| || |||||| |||||||    
T  34606286 ggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataat-aaagtcaaaagcagtttccttttat 34606384  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  34606385 ggtaataa 34606392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 611 - 756
Target Start/End: Original strand, 24438471 - 24438613
Alignment:
Q  611 atattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaat 710  Q
    ||||| ||||||||||||||||||| | || |  ||||| ||||||| |||||||| ||||| |||||||||||||||  ||||||||| ||||||||||    
T  24438471 atatttgggaaatgctaaccggtgcccccggg--gcactagttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaat 24438568  T
Q  711 tgataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||| || |||| ||||||||| ||||||||||||||| ||||    
T  24438569 ttataat-aatgtcaaaaacagtttccttttatggtaataattccc 24438613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 647 - 776
Target Start/End: Complemental strand, 11686482 - 11686354
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacag--ttttcttttatg 744  Q
    ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||  |||| |||||||    
T  11686482 actggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttttttttttatg 11686384  T
Q  745 gtaataaatccccttttatgaatatgcttaac 776  Q
    ||||| ||| | |||||||| |||||||||||    
T  11686383 gtaat-aattctcttttatg-atatgcttaac 11686354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 651 - 751
Target Start/End: Original strand, 18117175 - 18117274
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||| |||||| ||||||    
T  18117175 gttaagtatatgaaagaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttttttttatagtaata 18117273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 614 - 744
Target Start/End: Complemental strand, 27456301 - 27456175
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||| ||||| | ||   ||||||||||||||||||| |||  ||||||||||||||||||||  ||||||||||||||||||||| |    
T  27456301 ttagggaaatgctaactggtgcccccg---ggcactggttaaggatatggaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaattta 27456205  T
Q  714 taataaaagtcagaaacagttttcttttatg 744  Q
    |||| ||||||| || |||||| ||||||||    
T  27456204 taat-aaagtcaaaagcagtttccttttatg 27456175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 644 - 756
Target Start/End: Complemental strand, 42044454 - 42044343
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| |||||| | ||||||||  ||||||||||||||||||||  ||||||||||||||||||||| ||||| || |||| |||||||||||||||||    
T  42044454 ggcaccggttaaaggtatgaaaaaagaaattatatagtagttaatagattgaaattgtgtaattaatttataat-aatgtcaaaaacagttttcttttat 42044356  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  42044355 ggtaataattccc 42044343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 618 - 756
Target Start/End: Original strand, 47656981 - 47657114
Alignment:
Q  618 ggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataat 717  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||| |||||    
T  47656981 ggaaatgctaaccggtgct-tcggg-ggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattgaaattgtgtaattaatttataat 47657078  T
Q  718 aaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     ||||| | || ||||||  |||||||||||||| ||||    
T  47657079 -aaagttaaaagcagttt--ttttatggtaataattccc 47657114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 7689359 - 7689255
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||| |||||||||| |||| ||||||| || |||| |||||  ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  7689359 cactgattaaggatataaaaaaggaaattttacagtaattaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttcttttatgg 7689261  T
Q  746 taataa 751  Q
    ||||||    
T  7689260 taataa 7689255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 645 - 750
Target Start/End: Complemental strand, 23363327 - 23363223
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||| |||||||||| ||||| ||||||| |||||||||||||  ||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||||    
T  23363327 gcactcgttaaggataagaaaaaggaaattgtatagtagttaatgcattgaaattgtgtaattaatttataat-aaagttaaaaacagtttccttttatg 23363229  T
Q  745 gtaata 750  Q
    ||||||    
T  23363228 gtaata 23363223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 649 - 756
Target Start/End: Complemental strand, 13065033 - 13064926
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtc-agaaacagttttcttttatggta 747  Q
    |||||||||||||||||| |||||||||||| || ||||| ||||||| |||||||||||||| ||||| |||||| | ||||||||| |||||||||||    
T  13065033 tggttaaggatatgaaaaaggaaattatataatatttaatgtattgaatttgtgtaattaatttataat-aaagtcaaaaaacagtttccttttatggta 13064935  T
Q  748 ataaatccc 756  Q
    |||| ||||    
T  13064934 ataattccc 13064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 617 - 720
Target Start/End: Original strand, 1736980 - 1737081
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||||||||||| ||  | |||||||||||||||||||||||  ||||||||||| ||||||||  |||||||| |||||||||||||||||    
T  1736980 gggaaatgctaaccggtgct-tctgg-ggcactggttaaggatatgaaaaatgaaattatataatagttaatgcattgaaatagtgtaattaattgataa 1737077  T
Q  717 taaa 720  Q
    ||||    
T  1737078 taaa 1737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 645 - 751
Target Start/End: Original strand, 22739850 - 22739955
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||| ||||||||||  |||||| ||| |||||||||||||||  ||||||||||||||||||||| |||| |||| | | ||||||||||||||||||    
T  22739850 gcactagttaaggatactaaaagg-aaagtatatagtagttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatg 22739948  T
Q  745 gtaataa 751  Q
    |||||||    
T  22739949 gtaataa 22739955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 525234 - 525130
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||||||||| |||||||||| | ||| |||| ||||||||||  ||||||||||| ||||||||| ||||||||| ||| ||||||||| |||||||||    
T  525234 cactggttaaagatatgaaaaagaaaagtatacagtagttaatgcattgaaattgtataattaatttataataaaa-tcaaaaacagtttccttttatgg 525136  T
Q  746 taataa 751  Q
    ||||||    
T  525135 taataa 525130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 650 - 751
Target Start/End: Original strand, 28262062 - 28262157
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaat 749  Q
    ||||||||||||||||| |||||||||||||||||     |||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||| |||||    
T  28262062 ggttaaggatatgaaaaaggaaattatatagtagt-----tattgaaattatgtaattaattgataataaaa-tcaaaaacagtttccttttatagtaat 28262155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 43594195 - 43594091
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||||||||||||||| |||| |||||||||||| ||||||||  ||||||||||| ||||||||| ||||| ||||||| ||||||||| || |||||     
T  43594195 cactggttaaggatataaaaaaggaaattatataatagttaatgcattgaaattgtataattaatttataat-aaagtcaaaaacagtttcctcttatga 43594097  T
Q  746 taataa 751  Q
    ||||||    
T  43594096 taataa 43594091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 648 - 756
Target Start/End: Original strand, 45045799 - 45045906
Alignment:
Q  648 ctggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggta 747  Q
    |||||||||| ||||||||  |||||||||||||| |||||  ||||||||||||||||||||| ||||| || |||| ||||||||| |||||||| ||    
T  45045799 ctggttaagggtatgaaaaatgaaattatatagtaattaatgcattgaaattgtgtaattaatttataat-aatgtcaaaaacagtttccttttatgata 45045897  T
Q  748 ataaatccc 756  Q
    |||| ||||    
T  45045898 ataattccc 45045906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 669 - 744
Target Start/End: Complemental strand, 37674240 - 37674166
Alignment:
Q  669 gaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  37674240 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttcttttatg 37674166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 617 - 751
Target Start/End: Complemental strand, 18470126 - 18469995
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || | ||||| ||||||| |||  |||| ||||||||||||| |||||||  |||||||||||||||||||||  ||     
T  18470126 gggaaatgctaaccggtgcccccggg-ggcaccggttaagcatactaaaaaggaaattatatagcagttaatacattgaaattgtgtaattaatt--tat 18470030  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
     |||||||| ||||||||   ||||||||||||||    
T  18470029 gaaaagtcaaaaacagttacattttatggtaataa 18469995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 615 - 744
Target Start/End: Complemental strand, 37631730 - 37631604
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    |||||||||| |||||||||||  |  | ||||| |||||||||||| |||| |||||||||||| || |||||  ||| ||||| ||||||||||| ||    
T  37631730 tagggaaatgttaaccggtgcttcc--ggggcacgggttaaggatataaaaaaggaaattatataataattaatgcattaaaattatgtaattaatttat 37631633  T
Q  715 aataaaagtcagaaacagttttcttttatg 744  Q
    ||||||| ||| ||||||||| ||||||||    
T  37631632 aataaaa-tcaaaaacagtttccttttatg 37631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 647 - 751
Target Start/End: Original strand, 36437405 - 36437507
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggt 746  Q
    ||||||||||||||  |||| || ||||||||||||| ||||  ||||||||||| ||||||||| |||  |||||||| ||| |||||||||||||| |    
T  36437405 actggttaaggatactaaaaaggtaattatatagtaggtaattcattgaaattgtttaattaatttata--aaaagtcaaaaatagttttcttttatgat 36437502  T
Q  747 aataa 751  Q
    |||||    
T  36437503 aataa 36437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 645 - 736
Target Start/End: Complemental strand, 4100684 - 4100594
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagtttt 736  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||| |||| ||||| ||| ||||||| ||||| ||| ||| ||||||||||    
T  4100684 gcaccggttaaggatatgaaaaaggaaattatatagtaattaatgtattaaaattatgttattaatttataatcaaa-tcaaaaacagtttt 4100594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 663 - 753
Target Start/End: Complemental strand, 18220812 - 18220724
Alignment:
Q  663 aaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaat 753  Q
    |||| ||||||||||||||| ||||| ||| |||||||||||||||||| |||  ||| | || ||| |||||||||||||||||||||||    
T  18220812 aaaaaggaaattatatagtaattaatgtatagaaattgtgtaattaatttata--aaatggcaaaaatagttttcttttatggtaataaat 18220724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 33636479 - 33636583
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||| |||||| ||||||||| | |||||||||| || |||||  ||||||||||||||||||||| ||||| ||||| | ||| |||||  ||||||||    
T  33636479 cactagttaagaatatgaaaaagaaaattatataataattaattcattgaaattgtgtaattaatttataat-aaagtaaaaaatagtttatttttatgg 33636577  T
Q  746 taataa 751  Q
    ||||||    
T  33636578 taataa 33636583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 646 - 752
Target Start/End: Original strand, 4087650 - 4087753
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||||| |||  |||| |||||||||||||||||||||  |||||||| |||| ||||||| |||  ||   ||| |||||| ||||||||||||    
T  4087650 cactggttaagcatactaaaaaggaaattatatagtagttaatgcattgaaatagtgtgattaatttata--aagtttcaaaaacag-tttcttttatgg 4087746  T
Q  746 taataaa 752  Q
    |||||||    
T  4087747 taataaa 4087753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 648 - 711
Target Start/End: Complemental strand, 18220688 - 18220625
Alignment:
Q  648 ctggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaatt 711  Q
    ||||||||| |||  |||| ||||||||||||||| ||| | ||||||||||||||||||||||    
T  18220688 ctggttaagaatactaaaaaggaaattatatagtaattactgtattgaaattgtgtaattaatt 18220625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 649 - 756
Target Start/End: Original strand, 46716668 - 46716774
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||| ||||| |||| |||||||||||| || |||||  | ||||||| ||||||||||| ||||| ||||||| ||| | ||| |||||||| |||    
T  46716668 tggttaaagatataaaaaaggaaattatataatacttaatgcactgaaattatgtaattaatttataat-aaagtcaaaaatattttccttttatgataa 46716766  T
Q  749 taaatccc 756  Q
    ||| ||||    
T  46716767 taattccc 46716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 650 - 716
Target Start/End: Original strand, 3021922 - 3021988
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||| |||| |||| |||||||||||| ||||||||  ||||||||||| ||||||||| ||||    
T  3021922 ggttaagcatattaaaaaggaaattatatactagttaatacattgaaattgtataattaatttataa 3021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 650 - 716
Target Start/End: Complemental strand, 18220593 - 18220527
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    |||||||||||  |||| | ||||||||||||| ||||| |||| ||||||||||||||||| ||||    
T  18220593 ggttaaggatactaaaaagaaaattatatagtaattaatgtattaaaattgtgtaattaatttataa 18220527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 751
Target Start/End: Complemental strand, 47118100 - 47118044
Alignment:
Q  694 gaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||||||||||||||| ||||| |||||||  | |||||| |||||||||||||||    
T  47118100 gaaattgtgtaattaatttataat-aaagtcaagagcagtttccttttatggtaataa 47118044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 5e-37; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 20552931 - 20553067
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || | ||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  20552931 gggaaatgctaaccggtgccc-cggg-ggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataa 20553028  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||||| ||||||||| ||||||||||||||| ||||    
T  20553029 t-aaagtcaaaaacagtttccttttatggtaataattccc 20553067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 612 - 756
Target Start/End: Original strand, 31438641 - 31438782
Alignment:
Q  612 tattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaatt 711  Q
    |||| ||||||||||||||||||||| || |  |||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||    
T  31438641 tatttgggaaatgctaaccggtgctcccggg--gcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaatt 31438738  T
Q  712 gataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     ||||| ||||||| ||||||||| |||||||| |||||| ||||    
T  31438739 tataat-aaagtcaaaaacagtttccttttatgataataattccc 31438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 644 - 756
Target Start/End: Complemental strand, 38591035 - 38590924
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  38591035 ggcactggttaagaatatgaaaaaggaaattatacagtagttaatgtattaaaattgtgtaattaattgataat-aaagtcaaaaacagttttcttttat 38590937  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  38590936 ggtaataattccc 38590924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 644 - 782
Target Start/End: Original strand, 31390037 - 31390172
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||    
T  31390037 ggcactagttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataat-aaagtcaaaaacagtttccttttat 31390135  T
Q  744 ggtaataaatccccttttatgaatatgcttaactcgtgc 782  Q
    |||||| ||| ||||||||||  |||||||||| |||||    
T  31390136 ggtaat-aattcccttttatg-gtatgcttaacccgtgc 31390172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 616 - 756
Target Start/End: Original strand, 30486209 - 30486346
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| | || |  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||   |||    
T  30486209 agggaaatgctaactggtgcccccggg--gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaaactata 30486306  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||| ||||||||||||||| ||||    
T  30486307 at-aaagtcaaaaacagtttccttttatggtaataattccc 30486346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 651 - 756
Target Start/End: Complemental strand, 26387218 - 26387114
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||||    
T  26387218 gttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacaattttcttttatggtaata 26387120  T
Q  751 aatccc 756  Q
    | ||||    
T  26387119 attccc 26387114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 616 - 743
Target Start/End: Complemental strand, 561705 - 561581
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || |  |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||    
T  561705 agggaaatgctaaccggtgcccccggg--gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 561608  T
Q  716 ataaaagtcagaaacagttttcttttat 743  Q
    || ||||||| || |||||| |||||||    
T  561607 at-aaagtcaaaatcagtttccttttat 561581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 617 - 756
Target Start/End: Original strand, 44587902 - 44588038
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | || |  |||| |||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  44587902 gggaaatgctaaccggtgcccccggg--gcaccggttaaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataa 44587999  T
Q  717 taaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    | ||||| | ||||||||| ||||||||||||||| ||||    
T  44588000 t-aaagtaaaaaacagtttccttttatggtaataattccc 44588038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 43637165 - 43637295
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| | |||||  ||||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  43637165 gggaaatgctaaccggtgccc-cgaga--cactggttaaggatatgaataaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 43637261  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| ||||| |||  ||||||||||||||    
T  43637262 t-aaagtcaaaaacaatttctttttatggtaataa 43637295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 645 - 751
Target Start/End: Original strand, 4381821 - 4381926
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| || |||| ||||||||| ||||||||    
T  4381821 gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aatgtcaaaaacagtttccttttatg 4381919  T
Q  745 gtaataa 751  Q
    |||||||    
T  4381920 gtaataa 4381926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 34442718 - 34442582
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| |  |   |||||  |||||||||||||||| | | |||||||||||||||||  ||||||||||||||||||||| |||    
T  34442718 agggaaatgctaaccggtgccccgg---ggcacatgttaaggatatgaaaaagaagattatatagtagttaatgcattgaaattgtgtaattaatttata 34442622  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||||| ||||||||||||||||||||||||| ||||    
T  34442621 at-aaagtcaaaaacagttttcttttatggtaataattccc 34442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 646 - 751
Target Start/End: Original strand, 22567629 - 22567733
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||| | ||| |||||||||    
T  22567629 cactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaataatttccttttatgg 22567727  T
Q  746 taataa 751  Q
    ||||||    
T  22567728 taataa 22567733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 751
Target Start/End: Original strand, 27584769 - 27584869
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaat 749  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||| ||| || |||||| |||||||||||||    
T  27584769 ggttaaggatatgaaaagggaaattatatagtagttaaagcattgaaattgtgtaattaatttataataaaa-tcaaaagcagtttccttttatggtaat 27584867  T
Q  750 aa 751  Q
    ||    
T  27584868 aa 27584869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 612 - 756
Target Start/End: Complemental strand, 32361060 - 32360919
Alignment:
Q  612 tattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaatt 711  Q
    |||||||||||||||||||||||| | || |  ||||||||||||||| |||||| | |||||||||| ||||||||  ||||||||  | |||||||||    
T  32361060 tattagggaaatgctaaccggtgcccccggg--gcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatataattaatt 32360963  T
Q  712 gataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||| ||||||| ||||||||| ||||||||||||||| ||||    
T  32360962 gataat-aaagtcaaaaacagtttccttttatggtaataattccc 32360919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 644 - 756
Target Start/End: Complemental strand, 22068480 - 22068370
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||  ||||||||||| ||||||||||||||| ||||||| ||||||||| |||||||    
T  22068480 ggcactggttaaggatatgaaaaagggaattatatagtagtt-atgcattgaaattgtataattaattgataat-aaagtcaaaaacagtttccttttat 22068383  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  22068382 ggtaataattccc 22068370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 646 - 739
Target Start/End: Original strand, 2898098 - 2898190
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctt 739  Q
    ||||||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  2898098 cactggttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagttttctt 2898190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 646 - 751
Target Start/End: Complemental strand, 3668272 - 3668168
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||||||||||| |||| ||| |||||||||||||||||||||  ||||||||||||||||||||| ||||| || |||| ||||||||| |||||||||    
T  3668272 cactggttaagggtatggaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aatgtcaaaaacagtttccttttatgg 3668174  T
Q  746 taataa 751  Q
    ||||||    
T  3668173 taataa 3668168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 756
Target Start/End: Original strand, 6580187 - 6580325
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    |||||||||||||||| |||| | || | |||||||||||||| |||||||| ||||| |||||||||||||||  ||||||||| ||||||||||| ||    
T  6580187 tagggaaatgctaaccagtgccc-cggg-ggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttat 6580284  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    ||| || |||| ||||||||| ||||||||||||||| ||||    
T  6580285 aat-aatgtcaaaaacagtttccttttatggtaataattccc 6580325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 614 - 751
Target Start/End: Original strand, 22887747 - 22887881
Alignment:
Q  614 ttagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattga 713  Q
    |||||||||||||||||| ||| |||  | |||| ||||||||||||||||||  ||||||||||||||||||||  ||||||||| ||||||||||| |    
T  22887747 ttagggaaatgctaaccgatgc-ctccgg-ggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaattta 22887844  T
Q  714 taataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||| | ||||||||| |||||||||||||||    
T  22887845 taat-aaagttaaaaacagtttccttttatggtaataa 22887881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 615 - 747
Target Start/End: Complemental strand, 26891851 - 26891722
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || ||  ||||| |||||||||| |||| |||||||||||| ||||||||  ||||||||||||||||||||| ||    
T  26891851 tagggaaatgctaaccggtgcccccggga--cactgattaaggatataaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaatttat 26891754  T
Q  715 aataaaagtcagaaacagttttcttttatggta 747  Q
    ||| ||||||| ||| ||||| |||||||||||    
T  26891753 aat-aaagtcaaaaatagtttccttttatggta 26891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 616 - 751
Target Start/End: Complemental strand, 27856583 - 27856451
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    ||||||||| |||||||||| | || |  ||||||||||||  |||||||| |||||||||||| ||||||||  ||||||||||||||||||||| |||    
T  27856583 agggaaatgttaaccggtgcccccggg--gcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttata 27856486  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || || |||| ||||||||| |||||||||||||||    
T  27856485 at-aatgtcaaaaacagtttccttttatggtaataa 27856451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 617 - 751
Target Start/End: Original strand, 38296178 - 38296308
Alignment:
Q  617 gggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||   ||  | |||||||||||| |||||||||| | ||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  38296178 gggaaatgctaaccggtg---tcttggggcactggttaaagatatgaaaaagaaaattatatagtaattaatacattgaaattgtgtaattaatttataa 38296274  T
Q  717 taaaagtcagaaacagttttcttttatggtaataa 751  Q
    | ||||||| |||||||||  ||||||||||||||    
T  38296275 t-aaagtcaaaaacagtttctttttatggtaataa 38296308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 8969568 - 8969462
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| |||||||||||||||| | |||||||||||||||||||  |||||||| |||||||||||| ||||| ||||||| || |||||| |||||||    
T  8969568 ggcactagttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaatagtgtaattaatttataat-aaagtcaaaagcagtttccttttat 8969470  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  8969469 ggtaataa 8969462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 647 - 809
Target Start/End: Complemental strand, 13574187 - 13574031
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggt 746  Q
    |||||||||||||||||||| ||||| ||||||  | ||||| |||||||||||||||||||||| ||||| ||||||| |||||||||  |||||||||    
T  13574187 actggttaaggatatgaaaaaggaaaatatataaaaattaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttctttttatggt 13574089  T
Q  747 aataaatccccttttatgaatatgcttaactcgtgcactaagaggcaccgggttagcaggacc 809  Q
    ||| |||  |||||||||  |||||||||| ||||| ||||||  |||| |||||||||||||    
T  13574088 aat-aatttccttttatg-gtatgcttaacccgtgccctaaga--cacc-ggttagcaggacc 13574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 649 - 751
Target Start/End: Original strand, 1859192 - 1859293
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    ||||||||||||| ||||  |||||| |||||||||||||  ||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  1859192 tggttaaggatataaaaaaagaaattgtatagtagttaatgcattgaaattatgtaattaatttataat-aaagtcaaaaacagttttcttttatggtaa 1859290  T
Q  749 taa 751  Q
    |||    
T  1859291 taa 1859293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 644 - 744
Target Start/End: Original strand, 32860127 - 32860226
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| |||||||||||| |||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||    
T  32860127 ggcacgggttaaggatataaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttat 32860225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 645 - 756
Target Start/End: Complemental strand, 11021382 - 11021272
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    |||||| |||| ||||||||||  |||||||||| |||||||||  ||||||||||||||||||||  ||||| ||||||| ||||||||||||||| ||    
T  11021382 gcactgattaaagatatgaaaaaagaaattatatggtagttaatgcattgaaattgtgtaattaatatataat-aaagtcaaaaacagttttcttttgtg 11021284  T
Q  745 gtaataaatccc 756  Q
    ||||||| ||||    
T  11021283 gtaataattccc 11021272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 35851912 - 35851806
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||  ||||||||  ||||||||||||||||| ||||||| |||||||||  ||||||    
T  35851912 ggcaccggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataat-aaagtcaaaaacagtttcattttat 35851814  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  35851813 ggtaataa 35851806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 645 - 751
Target Start/End: Original strand, 5881243 - 5881352
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctat----tgaaattgtgtaattaattgataataaaagtcagaaacagttttcttt 740  Q
    |||| ||||||||||||||||| |||||||||||||||||||||  ||    ||||||||||||||||||||||||| ||||||| ||| ||||| ||||    
T  5881243 gcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcatgcattgaaattgtgtaattaattgataat-aaagtcaaaaagagtttccttt 5881341  T
Q  741 tatggtaataa 751  Q
    |||| ||||||    
T  5881342 tatgataataa 5881352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 647 - 751
Target Start/End: Complemental strand, 4022636 - 4022534
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggt 746  Q
    |||| ||||| |||||||||  ||||||| |||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |    
T  4022636 actgattaagaatatgaaaaaagaaatta-atagtagttaatgtattgaaattctgtaattaatttataat-aaagtcagaaacagtttccttttatgat 4022539  T
Q  747 aataa 751  Q
    |||||    
T  4022538 aataa 4022534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 8300933 - 8300857
Alignment:
Q  35 gcaaccagggccaattcctggccttaacacaaaggtcacttcctttttagatccagatggatggaaaactgtaagtt 111  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| || |||||||||||||||||||||||||| ||||    
T  8300933 gcaaccagggccaatccctggcctcaacacaaagatcacttctttcttagatccagatggatggaaaactgtgagtt 8300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 28600992 - 28601097
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| || ||||||| ||||||| ||  ||||||||||| ||||||||||||||| ||||| | |||||||||  ||||||    
T  28600992 ggcactggttaaggatatgaaaaagggaattataaagtagtt-atgcattgaaattgtataattaattgataat-aaagttaaaaacagtttctttttat 28601089  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  28601090 ggtaataa 28601097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 5093699 - 5093594
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||  ||| ||||||||||||||||| ||||| ||||||| || || ||| ||||||||    
T  5093699 gcactagttaaggatatgaaaaaggaaattaaatagtagttaatgcattaaaattgtgtaattaatttataat-aaagtcaaaagcaatttccttttatg 5093601  T
Q  745 gtaataa 751  Q
     ||||||    
T  5093600 ataataa 5093594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 663 - 751
Target Start/End: Complemental strand, 15079100 - 15079014
Alignment:
Q  663 aaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||| ||||| ||| |||||||| ||||||    
T  15079100 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttata--aaaagtcaaaaacaatttccttttatgataataa 15079014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 663 - 750
Target Start/End: Original strand, 39531868 - 39531953
Alignment:
Q  663 aaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||| |||  || ||||| || |||||||||||||||||||||    
T  39531868 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata--aagagtcaaaaccagttttcttttatggtaata 39531953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 646 - 756
Target Start/End: Complemental strand, 25782989 - 25782883
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||| |||||| ||||||||| ||||||||||||||   ||||  |||||||||||||||||| || ||||| ||||||| ||||| ||||||||||||     
T  25782989 cactagttaagaatatgaaaaaggaaattatatagt---taatgcattgaaattgtgtaattattttataat-aaagtcaaaaacaattttcttttatga 25782894  T
Q  746 taataaatccc 756  Q
    |||||| ||||    
T  25782893 taataattccc 25782883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 649 - 751
Target Start/End: Complemental strand, 29102439 - 29102338
Alignment:
Q  649 tggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaa 748  Q
    |||||||| |||| |||| | |||||||||||  ||||||  ||||||||| | ||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  29102439 tggttaagaatatcaaaaagaaaattatatagcggttaatacattgaaattttataattaatttataat-aaagtcaaaaacagttttcttttatagtaa 29102341  T
Q  749 taa 751  Q
    |||    
T  29102340 taa 29102338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 611 - 751
Target Start/End: Complemental strand, 34123216 - 34123080
Alignment:
Q  611 atattagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaat 710  Q
    ||||||||||||||||||||||||| |||  | || ||||||| || |||  ||||  ||||||||||| ||||||||   ||||| |||||||||||||    
T  34123216 atattagggaaatgctaaccggtgc-ctccgg-ggtactggttgagcatactaaaaaagaaattatataatagttaatgctttgaatttgtgtaattaat 34123119  T
Q  711 tgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    | |||  |||||||| ||||||||| |||||||||| ||||    
T  34123118 ttata--aaaagtcaaaaacagtttccttttatggtcataa 34123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 8298059 - 8298016
Alignment:
Q  228 gttggttgacaatgaggatttcctgaaggaactggagtgaagag 271  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||    
T  8298059 gttggttgacaatcaagattttctgaaggaactggagtgaagag 8298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 15146683 - 15146762
Alignment:
Q  670 aaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    |||||||||| ||||||||  ||||||||||| ||||||||| |||  |||||||| ||| | ||| |||||||| ||||||    
T  15146683 aaattatataatagttaatacattgaaattgtataattaatttata--aaaagtcaaaaataatttccttttatgataataa 15146762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 676
Target Start/End: Original strand, 45261902 - 45261962
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggat-atgaaaagggaaattat 676  Q
    |||||||||||||||||||| | | || |||||||||||||||| || ||||||||||||||    
T  45261902 agggaaatgctaaccggtgccccccag-ggcactggttaaggataataaaaagggaaattat 45261962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 620 - 756
Target Start/End: Original strand, 116207 - 116340
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||| | || |  |||| |||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| |    
T  116207 aaatgctaaccggtgcccccggg--gcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataat-a 116303  T
Q  720 aagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||||||||||||| |||||||| |||||| ||||    
T  116304 aagtcagaaacagtttccttttatgataataattccc 116340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 616 - 751
Target Start/End: Original strand, 22960 - 23092
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||||||||| | || ||| ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||| |||    
T  22960 agggaaatgctaaccggtgcccccg-gag-cactggttaaggatatgaaaaaggaaattatatagtaattaatacattgaaattgtgtaattaatttata 23057  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataa 751  Q
    || ||||||| ||||||||| |||||||| ||||||    
T  23058 at-aaagtcaaaaacagtttccttttatgttaataa 23092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 613 - 751
Target Start/End: Original strand, 674 - 809
Alignment:
Q  613 attagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattg 712  Q
    |||||||||||||||| |||||| | | |||| ||| |||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||     
T  674 attagggaaatgctaatcggtgccccc-agag-cacgggttaaagatatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaattt 771  T
Q  713 ataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||| ||||||| |||| ||||||||||||||| ||||    
T  772 ataat-aaagtcaaaaactgttttcttttatggtgataa 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 644 - 764
Target Start/End: Complemental strand, 6271 - 6153
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||  |||| |||||||||||||| | ||||| ||||||| ||||||||| |||||||    
T  6271 ggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcattggaattgtgtaattaaattataat-aaagtcaaaaacagtttccttttat 6173  T
Q  744 ggtaataaatccccttttatg 764  Q
    |||||| ||||||||||||||    
T  6172 ggtaat-aatccccttttatg 6153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 651 - 751
Target Start/End: Complemental strand, 147059 - 146960
Alignment:
Q  651 gttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaata 750  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||||    
T  147059 gttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataat-aaagtcaaaaacagttttctattacggtaata 146961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 63; Significance: 8e-27; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 650 - 756
Target Start/End: Original strand, 25750 - 25854
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaat 749  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||    
T  25750 ggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataat-aaagtcaaaaacaattttcttttatggtaat 25847  T
Q  750 aaatccc 756  Q
    || ||||    
T  25848 aattccc 25854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 8e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 615 - 756
Target Start/End: Complemental strand, 53873 - 53735
Alignment:
Q  615 tagggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgat 714  Q
    ||||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||    
T  53873 tagggaaatgctaaccggtgcccccggg--gcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttat 53776  T
Q  715 aataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
     || || |||| ||| ||||| ||||||||||||||| ||||    
T  53775 cat-aatgtcaaaaatagtttccttttatggtaataattccc 53735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 620 - 756
Target Start/End: Complemental strand, 95767 - 95635
Alignment:
Q  620 aaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataa 719  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||| |||||||||||| || |||||  ||||||||| ||||||||||| ||||| |    
T  95767 aaatgctaaccggtgcccccgag--gtactggttaagaatatgaaaaaggaaattatataataattaatgaattgaaattatgtaattaatttataat-a 95671  T
Q  720 aagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  95670 aagtca-aaacagttttcttttatggtaataattccc 95635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 60; Significance: 5e-25; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 50573 - 50679
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||||| || || |||||||||||    
T  50573 ggcactggttaaagatatgaaaaaggaaattatatagtagttaatgttttgaaattgtataattaatttataat-aaagtcaaaatcaattttcttttat 50671  T
Q  744 ggtaataa 751  Q
    | ||||||    
T  50672 gataataa 50679  T

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Target: scaffold0045; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 646 - 720
Target Start/End: Complemental strand, 53505 - 53431
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaa 720  Q
    |||||||||||||||| |||| |||||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  53505 cactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaa 53431  T

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Target: scaffold0190 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 644 - 756
Target Start/End: Original strand, 14921 - 15032
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||||  | |||||||||||| |||||| ||||| ||||||| ||||||||| |||||||    
T  14921 ggcactggttaaagatataaaaaaagaaattatatagtagttaatgcactgaaattgtgtagttaatttataat-aaagtcaaaaacagtttccttttat 15019  T
Q  744 ggtaataaatccc 756  Q
    |||||||| ||||    
T  15020 ggtaataattccc 15032  T

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Target: scaffold0524 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 645 - 751
Target Start/End: Original strand, 851 - 956
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||| |||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| || || ||| |||||||     
T  851 gcactagttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaatcaatttccttttata 949  T
Q  745 gtaataa 751  Q
    |||||||    
T  950 gtaataa 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 642 - 751
Target Start/End: Complemental strand, 17633 - 17526
Alignment:
Q  642 gaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttt 741  Q
    ||||||||| ||| ||||||||||| | |||||||||||||| ||||  |||||||||||| |||||||| ||||| ||||||| |||||||||||||||    
T  17633 gaggcactgtttacggatatgaaaaagaaaattatatagtagctaatgcattgaaattgtg-aattaatttataat-aaagtcaaaaacagttttctttt 17536  T
Q  742 atggtaataa 751  Q
    ||| ||||||    
T  17535 atgataataa 17526  T

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Target: scaffold0206 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 646 - 747
Target Start/End: Complemental strand, 11129 - 11029
Alignment:
Q  646 cactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    ||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||   ||||| ||||||| |||||||||  ||||||||    
T  11129 cactggttaaggatatgaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaaactataat-aaagtcaaaaacagtttcattttatgg 11031  T
Q  746 ta 747  Q
    ||    
T  11030 ta 11029  T

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Target: scaffold1266 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 317 - 423
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    ||||||||||||| ||||||||| | |||||||||| ||||||||  |||||||||||||||| |||| ||||| ||||||| ||||||||| ||| ||     
T  317 ggcactggttaagcatatgaaaaagaaaattatataatagttaatgcattgaaattgtgtaataaatttataat-aaagtcaaaaacagtttccttctac 415  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  416 ggtaataa 423  T

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Target: scaffold0050 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 644 - 751
Target Start/End: Original strand, 69251 - 69357
Alignment:
Q  644 ggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttat 743  Q
    |||||| |||||||||||||||| | |||||||||||||||||||  ||| ||||| ||||||||||| ||||| ||||||| || ||||||| |||||     
T  69251 ggcactcgttaaggatatgaaaaagtaaattatatagtagttaatacattaaaattatgtaattaatttataat-aaagtcaaaagcagtttttttttaa 69349  T
Q  744 ggtaataa 751  Q
    ||||||||    
T  69350 ggtaataa 69357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 645 - 716
Target Start/End: Complemental strand, 33841 - 33770
Alignment:
Q  645 gcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||| |||||| |||| |||| |||||||||||| ||||||||  ||||||||||||||||||||| ||||    
T  33841 gcacttgttaagtatattaaaatggaaattatataatagttaatacattgaaattgtgtaattaatttataa 33770  T

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Target: scaffold0014 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 756
Target Start/End: Complemental strand, 68477 - 68340
Alignment:
Q  616 agggaaatgctaaccggtgctctcgagaggcactggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgata 715  Q
    |||||||||||||| ||||| | || |  ||||||||||||||||||||||  ||||||||||||||||||||  ||| ||||||||||| ||| | |||    
T  68477 agggaaatgctaactggtgcccccggg--gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattaaaattgtgtaaataaattata 68380  T
Q  716 ataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    || ||||| | || |||||| |||||| |||||||| ||||    
T  68379 at-aaagttaaaatcagtttccttttaaggtaataattccc 68340  T

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Target: scaffold0425 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 680 - 756
Target Start/End: Original strand, 10771 - 10846
Alignment:
Q  680 gtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataaatccc 756  Q
    |||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||| ||||    
T  10771 gtagttaatgcattgaaattgtgtaattaatttataat-aaagtcaaaaacagtttccttttatggtaataattccc 10846  T

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Target: scaffold0113 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 776
Target Start/End: Original strand, 40952 - 41073
Alignment:
Q  652 ttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatggtaataa 751  Q
    ||||| |||||||||  ||||||||||| ||||||||  ||||||||| ||||||||||| |||||  |||||| ||||||||| |||||||| |||| |    
T  40952 ttaagaatatgaaaaatgaaattatataatagttaatgcattgaaattatgtaattaatttataat-gaagtcaaaaacagtttccttttatgataat-a 41049  T
Q  752 atccccttttatgaatatgcttaac 776  Q
    ||  ||||||||| |||||||||||    
T  41050 atttccttttatg-atatgcttaac 41073  T

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Target: scaffold0263 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 650 - 742
Target Start/End: Complemental strand, 19740 - 19649
Alignment:
Q  650 ggttaaggatatgaaaagggaaattatatagtagttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttctttta 742  Q
    ||||||| |||||||||  ||||||||||| || |||||  |||||||||||||||| |||| ||||| ||||||| ||||||||| ||||||    
T  19740 ggttaagcatatgaaaaaagaaattatataataattaatgcattgaaattgtgtaatgaatttataat-aaagtcaaaaacagtttcctttta 19649  T

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Target: scaffold0533 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 670 - 716
Target Start/End: Original strand, 5090 - 5136
Alignment:
Q  670 aaattatatagtagttaatctattgaaattgtgtaattaattgataa 716  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  5090 aaattatatagtagttaatttattgaaattgtgtaattaatttataa 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 647 - 751
Target Start/End: Complemental strand, 74632 - 74528
Alignment:
Q  647 actggttaaggatatgaaaagggaaattatatagtag-ttaatctattgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatgg 745  Q
    |||| |||| ||||||||||   |||||||||||||  ||||| || ||||||||| ||||||||||||||| ||| | | |||||  ||||||||||||    
T  74632 actgattaaagatatgaaaaaaaaaattatatagtaaattaatgtagtgaaattgtataattaattgataat-aaattaaaaaacaaatttcttttatgg 74534  T
Q  746 taataa 751  Q
    ||||||    
T  74533 taataa 74528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 691 - 744
Target Start/End: Original strand, 233925 - 233977
Alignment:
Q  691 attgaaattgtgtaattaattgataataaaagtcagaaacagttttcttttatg 744  Q
    ||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||    
T  233925 attgaaattgtgtaattaatttataat-aaagtcaaaagcagtttccttttatg 233977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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