View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928_1D_low_17 (Length: 303)

Name: NF4928_1D_low_17
Description: NF4928_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928_1D_low_17
NF4928_1D_low_17
[»] chr2 (48 HSPs)
chr2 (1-287)||(39456479-39456765)
chr2 (1-287)||(6799106-6799392)
chr2 (1-276)||(17697819-17698094)
chr2 (1-287)||(39663258-39663559)
chr2 (1-199)||(42517661-42517859)
chr2 (1-199)||(16376840-16377038)
chr2 (1-164)||(19906786-19906949)
chr2 (1-199)||(40561665-40561863)
chr2 (161-287)||(42517847-42517973)
chr2 (164-287)||(34400601-34400724)
chr2 (161-287)||(19907006-19907132)
chr2 (161-283)||(16377052-16377174)
chr2 (1-199)||(34400418-34400610)
chr2 (161-287)||(16764251-16764377)
chr2 (1-162)||(19581518-19581679)
chr2 (161-286)||(2577121-2577246)
chr2 (1-162)||(24205702-24205863)
chr2 (161-286)||(37021827-37021952)
chr2 (5-157)||(16764441-16764592)
chr2 (1-147)||(14387453-14387599)
chr2 (161-287)||(40561551-40561677)
chr2 (1-157)||(37022014-37022170)
chr2 (1-157)||(2577309-2577465)
chr2 (16-114)||(6783483-6783581)
chr2 (166-287)||(14387678-14387799)
chr2 (161-274)||(24205922-24206035)
chr2 (197-281)||(31474763-31474847)
chr2 (1-159)||(37646305-37646463)
chr2 (8-93)||(161968-162053)
chr2 (161-274)||(6783678-6783791)
chr2 (192-276)||(4047674-4047758)
chr2 (95-172)||(14387581-14387658)
chr2 (95-172)||(16764392-16764469)
chr2 (192-262)||(161784-161854)
chr2 (95-172)||(6783587-6783664)
chr2 (224-285)||(26581329-26581390)
chr2 (95-171)||(2577262-2577337)
chr2 (126-174)||(19906954-19907002)
chr2 (95-199)||(24205830-24205934)
chr2 (27-95)||(31474970-31475038)
chr2 (195-261)||(2359394-2359460)
chr2 (95-159)||(19581646-19581710)
chr2 (161-199)||(16377026-16377064)
chr2 (95-171)||(37021968-37022042)
chr2 (195-275)||(363405-363485)
chr2 (187-275)||(11021817-11021905)
chr2 (229-270)||(26581245-26581286)
chr2 (195-275)||(28247894-28247974)
[»] chr7 (58 HSPs)
chr7 (1-287)||(24226685-24226970)
chr7 (1-287)||(45360967-45361261)
chr7 (1-287)||(37114045-37114346)
chr7 (16-287)||(38472379-38472667)
chr7 (1-287)||(47384398-47384700)
chr7 (1-191)||(6605192-6605382)
chr7 (1-199)||(35691531-35691729)
chr7 (126-287)||(13169340-13169500)
chr7 (1-279)||(37791758-37792051)
chr7 (1-164)||(34775102-34775265)
chr7 (1-164)||(39857749-39857912)
chr7 (1-164)||(13169505-13169668)
chr7 (161-287)||(39857969-39858095)
chr7 (1-199)||(23904687-23904898)
chr7 (161-287)||(23904886-23905013)
chr7 (161-287)||(22155532-22155657)
chr7 (161-287)||(22211447-22211572)
chr7 (16-199)||(22211560-22211731)
chr7 (97-284)||(38549739-38549934)
chr7 (164-287)||(34775334-34775457)
chr7 (169-287)||(6605070-6605188)
chr7 (16-199)||(22155645-22155816)
chr7 (161-287)||(27664732-27664858)
chr7 (161-287)||(29995201-29995327)
chr7 (1-162)||(29994981-29995142)
chr7 (1-128)||(48227799-48227926)
chr7 (161-287)||(46437925-46438051)
chr7 (1-199)||(27664534-27664744)
chr7 (161-285)||(77690-77814)
chr7 (161-286)||(35402293-35402419)
chr7 (161-286)||(20479360-20479485)
chr7 (161-286)||(35403259-35403384)
chr7 (1-162)||(35403443-35403604)
chr7 (1-157)||(20479548-20479704)
chr7 (87-199)||(46437825-46437937)
chr7 (1-199)||(77802-77999)
chr7 (161-287)||(35691717-35691843)
chr7 (1-157)||(35402073-35402229)
chr7 (1-89)||(46437211-46437299)
chr7 (187-285)||(13036216-13036314)
chr7 (126-199)||(34775270-34775343)
chr7 (161-228)||(48227707-48227774)
chr7 (129-199)||(48227762-48227832)
chr7 (95-199)||(29995109-29995213)
chr7 (187-285)||(48311452-48311548)
chr7 (95-172)||(35402201-35402278)
chr7 (95-199)||(35403372-35403476)
chr7 (95-171)||(20479501-20479576)
chr7 (1-92)||(13039536-13039627)
chr7 (1-64)||(38549651-38549714)
chr7 (189-281)||(3921005-3921096)
chr7 (189-285)||(7403496-7403592)
chr7 (187-229)||(34692520-34692562)
chr7 (187-229)||(34784303-34784345)
chr7 (187-229)||(48302436-48302478)
chr7 (191-272)||(11685384-11685465)
chr7 (195-275)||(30108857-30108937)
chr7 (106-162)||(38549714-38549770)
[»] chr4 (70 HSPs)
chr4 (1-287)||(49524432-49524718)
chr4 (1-285)||(54387577-54387867)
chr4 (1-199)||(20493931-20494127)
chr4 (129-287)||(11254316-11254474)
chr4 (1-199)||(35401853-35402051)
chr4 (1-179)||(51013693-51013871)
chr4 (161-287)||(35402039-35402164)
chr4 (21-162)||(48645379-48645520)
chr4 (1-162)||(43520933-43521094)
chr4 (1-162)||(33264486-33264648)
chr4 (161-286)||(320540-320665)
chr4 (1-162)||(33265834-33265995)
chr4 (161-286)||(43507491-43507616)
chr4 (4-162)||(320724-320882)
chr4 (161-286)||(4172436-4172561)
chr4 (161-286)||(33264707-33264832)
chr4 (161-286)||(33265650-33265775)
chr4 (1-138)||(39345668-39345805)
chr4 (1-162)||(43507271-43507432)
chr4 (1-162)||(43508477-43508638)
chr4 (161-287)||(43520750-43520874)
chr4 (187-285)||(2691680-2691778)
chr4 (4-162)||(4173564-4173722)
chr4 (1-162)||(834866-835027)
chr4 (161-286)||(4173380-4173505)
chr4 (1-162)||(5439471-5439632)
chr4 (161-286)||(43508293-43508418)
chr4 (1-124)||(42982314-42982437)
chr4 (169-287)||(51013559-51013677)
chr4 (1-162)||(833327-833488)
chr4 (1-162)||(5437915-5438076)
chr4 (192-274)||(42982166-42982248)
chr4 (5-162)||(319381-319538)
chr4 (161-286)||(319597-319721)
chr4 (1-128)||(11254223-11254349)
chr4 (127-222)||(41759564-41759659)
chr4 (161-274)||(5439299-5439412)
chr4 (192-285)||(11641764-11641857)
chr4 (161-274)||(833547-833660)
chr4 (161-257)||(5438135-5438231)
chr4 (187-285)||(20820285-20820383)
chr4 (5-87)||(4169794-4169876)
chr4 (161-257)||(834710-834807)
chr4 (95-199)||(320653-320757)
chr4 (95-199)||(33264615-33264719)
chr4 (95-199)||(43508406-43508510)
chr4 (161-228)||(20494115-20494182)
chr4 (213-287)||(41760068-41760143)
chr4 (95-172)||(4172344-4172421)
chr4 (95-172)||(33265790-33265867)
chr4 (95-172)||(43507399-43507476)
chr4 (95-199)||(834795-834899)
chr4 (95-199)||(4173493-4173597)
chr4 (95-199)||(43520862-43520966)
chr4 (191-273)||(26397634-26397715)
chr4 (95-171)||(833455-833531)
chr4 (95-199)||(5438043-5438147)
chr4 (187-285)||(28100859-28100957)
chr4 (1-90)||(2691477-2691566)
chr4 (95-171)||(5439428-5439504)
chr4 (99-159)||(11641883-11641943)
chr4 (95-172)||(319505-319582)
chr4 (99-159)||(48645491-48645551)
chr4 (83-157)||(4172298-4172372)
chr4 (228-285)||(11641686-11641743)
chr4 (4-66)||(11641996-11642058)
chr4 (187-275)||(32653350-32653438)
chr4 (195-275)||(39190538-39190618)
chr4 (195-275)||(39922726-39922806)
chr4 (195-275)||(42879576-42879656)
[»] chr3 (81 HSPs)
chr3 (1-287)||(21350295-21350590)
chr3 (1-199)||(17516760-17516958)
chr3 (1-285)||(42282175-42282458)
chr3 (1-199)||(54412334-54412532)
chr3 (1-192)||(23291674-23291864)
chr3 (1-199)||(44268085-44268283)
chr3 (1-199)||(30598441-30598639)
chr3 (1-199)||(43766835-43767032)
chr3 (1-162)||(46113929-46114090)
chr3 (1-179)||(7883432-7883610)
chr3 (1-179)||(41979159-41979337)
chr3 (1-158)||(611050-611207)
chr3 (1-163)||(35903929-35904091)
chr3 (1-164)||(2378805-2378968)
chr3 (161-287)||(17516646-17516772)
chr3 (1-162)||(53092727-53092888)
chr3 (167-287)||(27897488-27897608)
chr3 (167-287)||(44268277-44268397)
chr3 (1-172)||(54899888-54900059)
chr3 (161-287)||(2378614-2378740)
chr3 (161-287)||(43766722-43766847)
chr3 (1-146)||(27897254-27897399)
chr3 (1-162)||(51686218-51686379)
chr3 (167-287)||(30598633-30598753)
chr3 (1-162)||(3150356-3150517)
chr3 (95-285)||(46113764-46113962)
chr3 (1-158)||(48829460-48829617)
chr3 (95-285)||(51686053-51686251)
chr3 (1-162)||(2661732-2661893)
chr3 (1-162)||(38193334-38193495)
chr3 (95-285)||(610890-611079)
chr3 (1-162)||(44795714-44795875)
chr3 (1-162)||(46308911-46309072)
chr3 (5-162)||(46310260-46310417)
chr3 (1-162)||(53187846-53188007)
chr3 (164-287)||(41979025-41979148)
chr3 (161-287)||(7883618-7883744)
chr3 (165-287)||(35904118-35904240)
chr3 (161-286)||(46309131-46309256)
chr3 (161-286)||(46609473-46609598)
chr3 (1-157)||(46611132-46611288)
chr3 (168-287)||(53188073-53188192)
chr3 (161-287)||(2661547-2661673)
chr3 (1-162)||(28626515-28626676)
chr3 (161-286)||(38192207-38192332)
chr3 (161-286)||(38193150-38193275)
chr3 (161-286)||(46310076-46310201)
chr3 (169-281)||(23291867-23291979)
chr3 (1-162)||(46609253-46609414)
chr3 (161-286)||(53093913-53094038)
chr3 (1-162)||(53094097-53094258)
chr3 (165-287)||(44795531-44795651)
chr3 (161-287)||(54899747-54899873)
chr3 (161-286)||(53092947-53093072)
chr3 (161-262)||(46610967-46611068)
chr3 (95-287)||(3150484-3150687)
chr3 (96-199)||(53092856-53092959)
chr3 (161-228)||(54412253-54412320)
chr3 (192-285)||(24846249-24846340)
chr3 (126-199)||(2378728-2378800)
chr3 (95-172)||(2661688-2661765)
chr3 (161-257)||(28626735-28626832)
chr3 (95-172)||(53187974-53188051)
chr3 (95-172)||(38193290-38193367)
chr3 (95-172)||(46310216-46310293)
chr3 (95-172)||(46609381-46609458)
chr3 (95-172)||(46611083-46611160)
chr3 (95-199)||(46309039-46309143)
chr3 (1-75)||(38191999-38192073)
chr3 (95-201)||(44795641-44795747)
chr3 (95-201)||(53094024-53094130)
chr3 (95-172)||(38192115-38192192)
chr3 (95-171)||(28626643-28626719)
chr3 (95-159)||(48829588-48829652)
chr3 (231-285)||(13466811-13466865)
chr3 (121-164)||(27897425-27897468)
chr3 (191-262)||(35861831-35861902)
chr3 (161-199)||(54412308-54412346)
chr3 (194-259)||(22218568-22218633)
chr3 (192-285)||(23875963-23876055)
chr3 (187-229)||(37865668-37865710)
[»] chr8 (74 HSPs)
chr8 (1-287)||(22273573-22273876)
chr8 (1-287)||(41040824-41041128)
chr8 (1-283)||(26238830-26239120)
chr8 (1-199)||(42943213-42943411)
chr8 (1-199)||(5037851-5038047)
chr8 (1-199)||(38548618-38548816)
chr8 (1-199)||(8608342-8608540)
chr8 (1-199)||(13283782-13283980)
chr8 (161-287)||(5037737-5037863)
chr8 (1-179)||(13106908-13107086)
chr8 (1-172)||(33707310-33707481)
chr8 (161-287)||(13484800-13484926)
chr8 (95-287)||(41824156-41824356)
chr8 (161-287)||(42943099-42943225)
chr8 (1-162)||(27692661-27692822)
chr8 (100-285)||(3152194-3152378)
chr8 (1-162)||(29237255-29237416)
chr8 (16-147)||(15308100-15308231)
chr8 (16-147)||(15488469-15488600)
chr8 (1-155)||(41823994-41824148)
chr8 (1-162)||(33761173-33761334)
chr8 (161-286)||(33761393-33761518)
chr8 (161-286)||(33762357-33762482)
chr8 (1-162)||(35509318-35509479)
chr8 (161-286)||(35509538-35509663)
chr8 (161-287)||(38548504-38548630)
chr8 (16-157)||(3152076-3152217)
chr8 (1-162)||(29239011-29239172)
chr8 (161-287)||(27692478-27692602)
chr8 (161-287)||(8608528-8608654)
chr8 (161-287)||(13107094-13107220)
chr8 (161-287)||(13283668-13283794)
chr8 (169-287)||(33707504-33707622)
chr8 (1-162)||(35510643-35510804)
chr8 (181-285)||(29694003-29694107)
chr8 (1-162)||(601528-601689)
chr8 (161-286)||(29238827-29238952)
chr8 (161-286)||(35510459-35510584)
chr8 (1-128)||(13484649-13484775)
chr8 (161-274)||(15307913-15308026)
chr8 (161-274)||(15488282-15488395)
chr8 (12-285)||(17807134-17807406)
chr8 (1-161)||(43261964-43262122)
chr8 (16-162)||(27404329-27404475)
chr8 (161-274)||(27404534-27404647)
chr8 (1-162)||(33762541-33762698)
chr8 (161-262)||(29237475-29237576)
chr8 (161-262)||(601368-601469)
chr8 (187-285)||(11719742-11719840)
chr8 (195-285)||(15562711-15562801)
chr8 (95-199)||(27692590-27692694)
chr8 (95-199)||(29238940-29239044)
chr8 (95-199)||(33761301-33761405)
chr8 (95-199)||(33762470-33762574)
chr8 (95-199)||(35509446-35509550)
chr8 (95-172)||(35510599-35510676)
chr8 (129-199)||(13484742-13484812)
chr8 (95-172)||(601484-601561)
chr8 (16-93)||(29694210-29694287)
chr8 (95-199)||(15308014-15308118)
chr8 (95-199)||(15488383-15488487)
chr8 (95-199)||(29237383-29237487)
chr8 (100-199)||(27404447-27404546)
chr8 (236-287)||(40338178-40338229)
chr8 (195-285)||(15684048-15684138)
chr8 (187-285)||(11790536-11790634)
chr8 (1-47)||(15562527-15562573)
chr8 (187-229)||(25705567-25705609)
chr8 (187-229)||(33369046-33369088)
chr8 (195-275)||(9186352-9186432)
chr8 (190-229)||(25370797-25370836)
chr8 (187-226)||(25402576-25402615)
chr8 (187-226)||(25707085-25707124)
chr8 (195-275)||(11031698-11031778)
[»] chr1 (63 HSPs)
chr1 (1-287)||(46582114-46582400)
chr1 (16-287)||(45045039-45045327)
chr1 (1-199)||(3011959-3012157)
chr1 (1-199)||(51894671-51894869)
chr1 (1-199)||(2870863-2871061)
chr1 (1-199)||(31236923-31237121)
chr1 (126-287)||(50554435-50554596)
chr1 (1-199)||(37087923-37088121)
chr1 (161-287)||(2870749-2870875)
chr1 (1-179)||(33599322-33599500)
chr1 (161-287)||(31237109-31237235)
chr1 (3-179)||(34776675-34776851)
chr1 (1-199)||(4854514-4854712)
chr1 (161-287)||(51894857-51894983)
chr1 (1-157)||(26223691-26223847)
chr1 (96-285)||(52642121-52642318)
chr1 (1-164)||(50554267-50554430)
chr1 (1-164)||(6816941-6817112)
chr1 (161-287)||(37087810-37087935)
chr1 (161-287)||(3012145-3012271)
chr1 (161-287)||(6817169-6817295)
chr1 (1-162)||(37345786-37345947)
chr1 (152-285)||(15106026-15106157)
chr1 (161-287)||(34776859-34776985)
chr1 (1-162)||(25276846-25277007)
chr1 (1-162)||(27089103-27089264)
chr1 (1-157)||(1444010-1444166)
chr1 (1-162)||(8168046-8168206)
chr1 (161-286)||(20944730-20944855)
chr1 (161-287)||(33599508-33599634)
chr1 (161-286)||(1443822-1443947)
chr1 (161-286)||(8168265-8168390)
chr1 (161-286)||(8169208-8169333)
chr1 (1-162)||(8169392-8169553)
chr1 (161-286)||(9120362-9120487)
chr1 (4-157)||(47011563-47011716)
chr1 (161-286)||(47011779-47011904)
chr1 (1-162)||(52641992-52642153)
chr1 (1-157)||(9120143-9120299)
chr1 (161-284)||(26223911-26224034)
chr1 (161-287)||(27088918-27089044)
chr1 (95-172)||(25277008-25277085)
chr1 (95-172)||(37345742-37345819)
chr1 (95-199)||(8168173-8168277)
chr1 (95-199)||(8169321-8169425)
chr1 (96-199)||(27089032-27089135)
chr1 (95-172)||(26223819-26223896)
chr1 (186-285)||(18058115-18058214)
chr1 (68-162)||(20944914-20945008)
chr1 (1-78)||(23577740-23577817)
chr1 (95-171)||(1443963-1444038)
chr1 (95-171)||(9120271-9120346)
chr1 (95-199)||(23577873-23577977)
chr1 (95-199)||(47011688-47011791)
chr1 (161-287)||(4854700-4854813)
chr1 (126-174)||(6817117-6817165)
chr1 (95-199)||(20944843-20944947)
chr1 (165-206)||(25277104-25277145)
chr1 (165-206)||(37345682-37345723)
chr1 (187-275)||(5784586-5784674)
chr1 (95-162)||(25276974-25277041)
chr1 (211-285)||(3369746-3369820)
chr1 (16-93)||(3369549-3369626)
[»] chr6 (42 HSPs)
chr6 (1-287)||(9399727-9400020)
chr6 (1-199)||(20525121-20525319)
chr6 (1-247)||(21091198-21091443)
chr6 (161-287)||(7371422-7371548)
chr6 (161-287)||(11356826-11356952)
chr6 (1-159)||(7051072-7051230)
chr6 (1-162)||(11357020-11357179)
chr6 (1-157)||(6902727-6902883)
chr6 (1-158)||(21068729-21068886)
chr6 (161-287)||(20525008-20525133)
chr6 (1-199)||(13610793-13610982)
chr6 (1-158)||(21045414-21045571)
chr6 (1-162)||(32518321-32518482)
chr6 (1-162)||(10569743-10569904)
chr6 (1-162)||(18644928-18645089)
chr6 (1-124)||(33267165-33267288)
chr6 (174-281)||(33267321-33267428)
chr6 (161-287)||(13610970-13611096)
chr6 (161-286)||(18644745-18644869)
chr6 (1-157)||(3480486-3480642)
chr6 (1-157)||(32437231-32437387)
chr6 (169-287)||(32437459-32437577)
chr6 (161-286)||(32454571-32454696)
chr6 (27-284)||(33276925-33277193)
chr6 (1-113)||(7371279-7371391)
chr6 (1-157)||(32454352-32454508)
chr6 (1-285)||(14337770-14338065)
chr6 (126-199)||(11356940-11357013)
chr6 (95-172)||(32518277-32518354)
chr6 (95-172)||(32437359-32437436)
chr6 (95-247)||(21045542-21045693)
chr6 (95-248)||(21068857-21069009)
chr6 (95-171)||(3480439-3480514)
chr6 (187-243)||(6902659-6902715)
chr6 (129-174)||(7371373-7371418)
chr6 (95-172)||(18644884-18644961)
chr6 (96-158)||(10569713-10569775)
chr6 (126-171)||(32454510-32454555)
chr6 (165-206)||(32518217-32518258)
chr6 (187-275)||(4289702-4289790)
chr6 (195-275)||(17950853-17950933)
chr6 (195-275)||(35174674-35174754)
[»] chr5 (52 HSPs)
chr5 (1-287)||(34328504-34328812)
chr5 (1-228)||(28813522-28813750)
chr5 (16-199)||(32134355-32134538)
chr5 (1-164)||(30464004-30464167)
chr5 (1-191)||(28821886-28822075)
chr5 (1-162)||(12738560-12738721)
chr5 (1-162)||(12801383-12801544)
chr5 (1-199)||(7269233-7269431)
chr5 (161-287)||(32134526-32134652)
chr5 (167-287)||(30464239-30464359)
chr5 (169-292)||(28821759-28821882)
chr5 (161-287)||(12738375-12738501)
chr5 (161-287)||(12801198-12801324)
chr5 (16-199)||(42471667-42471850)
chr5 (161-287)||(8540978-8541104)
chr5 (1-162)||(17577759-17577920)
chr5 (161-287)||(2181368-2181495)
chr5 (1-132)||(8541125-8541256)
chr5 (164-285)||(18623740-18623859)
chr5 (161-287)||(24540086-24540212)
chr5 (1-157)||(21842821-21842977)
chr5 (95-199)||(2181483-2181587)
chr5 (1-157)||(29620242-29620398)
chr5 (1-157)||(40782040-40782196)
chr5 (169-287)||(21842631-21842749)
chr5 (1-114)||(2852990-2853103)
chr5 (161-274)||(17576275-17576388)
chr5 (161-274)||(17577587-17577700)
chr5 (165-286)||(29620465-29620586)
chr5 (161-286)||(40781852-40781977)
chr5 (181-285)||(41494145-41494248)
chr5 (161-258)||(7269148-7269245)
chr5 (68-162)||(24539933-24540027)
chr5 (187-276)||(19998145-19998234)
chr5 (95-197)||(24539994-24540096)
chr5 (95-172)||(17577715-17577792)
chr5 (1-98)||(41493948-41494045)
chr5 (161-238)||(42471838-42471914)
chr5 (96-172)||(21842772-21842848)
chr5 (129-199)||(8541092-8541162)
chr5 (187-285)||(27077163-27077261)
chr5 (95-171)||(29620370-29620445)
chr5 (95-199)||(40781965-40782068)
chr5 (126-188)||(30464172-30464234)
chr5 (1-98)||(27077355-27077452)
chr5 (228-287)||(17575567-17575626)
chr5 (190-281)||(6116610-6116701)
chr5 (126-164)||(12738515-12738553)
chr5 (126-164)||(12801338-12801376)
chr5 (186-275)||(1344528-1344617)
chr5 (209-274)||(42471921-42471985)
chr5 (193-275)||(1343482-1343564)
[»] scaffold0564 (3 HSPs)
scaffold0564 (161-287)||(9571-9697)
scaffold0564 (133-199)||(9711-9777)
scaffold0564 (161-199)||(9685-9723)
[»] scaffold0345 (3 HSPs)
scaffold0345 (161-287)||(1187-1313)
scaffold0345 (1-162)||(1381-1540)
scaffold0345 (126-199)||(1301-1374)
[»] scaffold0058 (3 HSPs)
scaffold0058 (6-162)||(7061-7217)
scaffold0058 (161-287)||(6876-7002)
scaffold0058 (95-199)||(6990-7094)
[»] scaffold0004 (2 HSPs)
scaffold0004 (95-287)||(106891-107081)
scaffold0004 (39-162)||(106801-106924)
[»] scaffold1712 (3 HSPs)
scaffold1712 (1-162)||(1086-1247)
scaffold1712 (161-274)||(1306-1419)
scaffold1712 (95-171)||(1214-1290)
[»] scaffold0081 (3 HSPs)
scaffold0081 (161-286)||(53899-54024)
scaffold0081 (1-157)||(54087-54243)
scaffold0081 (95-171)||(54040-54115)
[»] scaffold0920 (2 HSPs)
scaffold0920 (196-285)||(1065-1154)
scaffold0920 (228-285)||(1175-1232)
[»] scaffold0722 (1 HSPs)
scaffold0722 (187-285)||(4442-4539)
[»] scaffold0001 (1 HSPs)
scaffold0001 (16-90)||(63617-63691)
[»] scaffold0070 (1 HSPs)
scaffold0070 (187-226)||(57665-57704)
[»] scaffold1041 (2 HSPs)
scaffold1041 (187-226)||(2352-2391)
scaffold1041 (186-215)||(2686-2715)


Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 39456765 - 39456479
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||| ||||||    
T  39456765 aaatcagtccatccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggacca 39456666  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  39456665 aattgattgatttatagaaaattgtcaaggactaaattgatggattttcagaaaattgccaacggctctttgtcatctttctcattaacggctctttctt 39456566  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39456565 tcccaaatatataaatttgaaactctaatgttataatttgtcacctagagttcaaaatccctcaaatttcttccatgaattgatgtc 39456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 6799392 - 6799106
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||||    
T  6799392 aaatcagtccctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggcttaccacgccagatgccacgcaagtagggacca 6799293  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    | |||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  6799292 agttgattgatttagagaaaattgccaaggaccaaattgatggattttcaaaaaattgtcaacggctctttctcctcttcctcattaacggctctttatt 6799193  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6799192 ccccaaatatataaatttggaaccctaatgttataatttgtcacctagagtttaaaatcccccaaatttgttccatgaattgatgtc 6799106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 17698094 - 17697819
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||| | | |||||||||||||||||||||||||| |||||| |||  ||||||||| ||||| |||||||||| ||||||    
T  17698094 aaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaatctcttaaaagacttaccacgttagatgtcacgcaagcagggacca 17697995  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||| |||  ||||   ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||  |||||||||    
T  17697994 aattaattagtttactgaaaattgtcaaggaccaaattgatggattttcagaaaattgtcaacgcctctttctcctattcctcattaacaactctttctt 17697895  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccat 276  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17697894 ccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccat 17697819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 39663258 - 39663559
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||| ||    
T  39663258 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagggatca 39663357  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg-----------------gctctttctcctcttcctc 183  Q
    ||||||||||||  || | ||||| ||||||||||||||||||||||||| |||||||||||||                 |||||||||||||||||||    
T  39663358 aattgattgatt--tacataattgccaaggaccaaattgatggattttcataaaattgccaacggctctttctcattaatagctctttctcctcttcctc 39663455  T
Q  184 attaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattga 283  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  | |||| |||||||||||| ||||||||| ||||||||||    
T  39663456 attaacggctctttcttccccaaatataaaaatttgaaaccctaatgttataatttgttgcatagaattcaaaatcccctaaatttcttacatgaattga 39663555  T
Q  284 tgtc 287  Q
    ||||    
T  39663556 tgtc 39663559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 42517661 - 42517859
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  42517661 aaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcatacaaggcttaccacgtcagatgccacgcaagcagggacca 42517760  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42517761 aattgattgatttacagaaaattgtcaaggagcaaattgatggattttcagaaaattgccaacggctctttctcctctttctcattaacggctctttct 42517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 16376840 - 16377038
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||| ||||| ||||| || | ||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||    
T  16376840 aaatcagtccctccgttaagttggtctattaacagaggtaacatttaacgttaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggacca 16376939  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  16376940 aattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgtcaacggctctttctcctctttctcattaacggctctttct 16377038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19906786 - 19906949
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||    
T  19906786 aaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgccacgcaaacagggacca 19906885  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  19906886 aattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgtcaacg 19906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 40561863 - 40561665
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    ||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  40561863 aaatcggtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 40561764  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | || |||  ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||  | | ||||||||||||||    
T  40561763 aattgattgatttacacaacatttccaaggaccaaattgatggattttcagaaaattggcaacggctatttctcttctttgtgagtaacggctctttct 40561665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 42517847 - 42517973
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42517847 aacggctctttctcctcttcctcattaacagctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcc 42517946  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    ||||| |||||||||||||||||||||    
T  42517947 cccaattttcttccatgaattgatgtc 42517973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 34400601 - 34400724
Alignment:
Q  164 ggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccc 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  34400601 ggctctttctcctcttcctcatttacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatccccc 34400700  T
Q  264 aaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||||||||    
T  34400701 aaatttcttccatgaattgatgtc 34400724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 19907006 - 19907132
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  19907006 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcc 19907105  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||| ||||||||||||||    
T  19907106 cccaaatttcttacatgaattgatgtc 19907132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 16377052 - 16377174
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  16377052 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctacagttcaaaatcc 16377151  T
Q  261 cccaaatttcttccatgaattga 283  Q
     | ||||||||||||||||||||    
T  16377152 tctaaatttcttccatgaattga 16377174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 34400418 - 34400610
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    ||||| |||| ||| ||||||||||||||||||||||||||  ||||| ||| ||||||||||||  ||||||||||||||| |||||       |||||    
T  34400418 aaatcggtccctccgttaagttggtctgttaacggaggtgatatgtaatgttgacctcttacaagacttaccacgtcagatgtcacgcc------gacca 34400511  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||    
T  34400512 aattgattgatttacagaaaaatgtcaaggaccaaattgatggtttttcagaaaattgtcaatggctctttctcctctttctcattaaaggctctttct 34400610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 16764377 - 16764251
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  16764377 aacgactctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacgtagagttcaaaatcc 16764278  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  16764277 ccaaaatttcttccatgaattgatgtc 16764251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 19581518 - 19581679
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| ||||||| || |||||||||||||||| ||||   ||||| |||||||||| ||||||||||| ||| |||||||||| ||||||    
T  19581518 aaatcagtctttccgttaagtttgtatgttaacggaggtgacatgtactattaacttcttacaaggcttaccacgtcaaatgtcacgcaagcagggacca 19581617  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||    
T  19581618 aattgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgccaa 19581679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 2577246 - 2577121
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  2577246 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 2577147  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  2577146 ccaaaatttcttccataaattgatgt 2577121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24205702 - 24205863
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| || |||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||| ||||||| ||||||    
T  24205702 aaattagtccctccgttcagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcagggacca 24205801  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  24205802 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 24205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 37021952 - 37021827
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  37021952 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 37021853  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  37021852 ccaaaatttcttccataaattgatgt 37021827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 16764592 - 16764441
Alignment:
Q  5 cagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaatt 104  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||| ||||||||||  ||||||| |    
T  16764592 cagtccctccgttaagttg-tctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccatgtcagatgtcacgcaagcagagaccaaact 16764494  T
Q  105 gattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    |||||||||| | ||||||  |||||||||||||||||||||| || ||||||    
T  16764493 gattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatt 16764441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14387453 - 14387599
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| || | ||||||| | |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  14387453 aaataagtccctccgttaaattagactgttaaagaaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 14387552  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattt 147  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||    
T  14387553 aactgattgatttacacaaaatttccaaggaccaaattgatggattt 14387599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 40561677 - 40561551
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||| ||||||||||||||||||  | || |||| ||||||||||    
T  40561677 aacggctctttctcctcttcctcattaagggctatttattcctcaaatatataaatttggaaccctaatgttataattccttacatagaattcaaaatcc 40561578  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||| ||||||||||    
T  40561577 ccaaaatttcttccataaattgatgtc 40561551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 37022170 - 37022014
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||| ||||||||| ||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  37022170 aaattagtccctccgttaatttggtccgttaacggaagtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggacca 37022071  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| | |||||| |||||||||||||| || ||||||    
T  37022070 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt 37022014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 2577465 - 2577309
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| ||||||||||||| |||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  2577465 aaattagtccctccgttaatttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggacca 2577366  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || | ||||||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  2577365 aactaattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 2577309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 6783483 - 6783581
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgattta 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| |||||||| |||||||||||    
T  6783483 ttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattta 6783581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 166 - 287
Target Start/End: Original strand, 14387678 - 14387799
Alignment:
Q  166 ctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaa 265  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||||||||| | ||| ||||||||||||  | || ||||||||||||||||| ||    
T  14387678 ctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggagcccgaatgttataattccttacatagagttcaaaatccccaaa 14387777  T
Q  266 atttcttccatgaattgatgtc 287  Q
    ||||||||||  ||||||||||    
T  14387778 atttcttccaataattgatgtc 14387799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 24205922 - 24206035
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||| |    
T  24205922 aacggctctttctccacttcctcatttagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaattc 24206021  T
Q  261 cccaaatttcttcc 274  Q
    || |||||| ||||    
T  24206022 ccaaaattttttcc 24206035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 31474847 - 31474763
Alignment:
Q  197 tcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaatt 281  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||| | | ||||||||||||||||    
T  31474847 tcttccccaaatatataaatttggaaccctaatattataatttgtgaccttgagttcaaaatcctcaagatttcttccatgaatt 31474763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37646463 - 37646305
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||  ||||||||| ||||||||||| ||||| ||||  ||||||| ||||||||| ||||||||||||||| |||||||||| |||| |    
T  37646463 aaatcagtccctctgttaagttggcctgttaacggacgtgacatgtactgttaaccgcttacaaggcttaccacgtcagatgtcacgcaagcagggacta 37646364  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc 159  Q
    | ||||  ||     | |||||| |||||||| |||||||| ||||| |||||||||||    
T  37646363 atttgaccgaaaatgataaaattatcaaggacaaaattgattgatttacagaaaattgc 37646305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 162053 - 161968
Alignment:
Q  8 tccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagca 93  Q
    ||||||| |||||||||||| |||||||||||||| |||| |||||||| ||||||||  ||||||||||||||| ||||||||||    
T  162053 tccatccgttaagttggtctattaacggaggtgacatgtaccgttaaccgcttacaagacttaccacgtcagatgtcacgcaagca 161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 6783678 - 6783791
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||| ||||||||| |||||||||| |   || ||||||||||||||||||||||||  ||||||||||||||||||  | || ||||||||||||| |    
T  6783678 aacggttctttctccacttcctcatttagaactatttcttccccaaatatataaatttagaaccctaatgttataattccttacatagagttcaaaattc 6783777  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  6783778 ccaaaatttcttcc 6783791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 4047758 - 4047674
Alignment:
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccat 276  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||| ||||  ||| |||||||||    
T  4047758 ctctttcttccccaaatctataaaattgaaaccctaattttataatttgtcatctagagttcaaagtcccaaaaacttcttccat 4047674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 14387581 - 14387658
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| ||||||   ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14387581 ggaccaaattgatggatttaggcaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 14387658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 16764469 - 16764392
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||   |||||||||||||||||||||||||||||||| |||||||||||||    
T  16764469 ggaccaaattgatggatttacacaaaatttctaaggaccaaattgatggattttcagaaaattggcaacggctctttc 16764392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 161854 - 161784
Alignment:
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccc 262  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||| | |||||||||||||    
T  161854 ctctttcttccccaaatataaaaatttggaaccctaattttataatttgtcgcctggtgttcaaaatcccc 161784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 6783587 - 6783664
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  |||||||||||||    
T  6783587 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctctttc 6783664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 26581329 - 26581390
Alignment:
Q  224 cctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  26581329 cctaattttataatttgtcacctagagttcaaaattcccaaaatttcttccattaattgatg 26581390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 2577337 - 2577262
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  2577337 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 2577262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 19906954 - 19907002
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctc 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19906954 caaggactaaattgatggattttcagaaaattgccaacggctctttctc 19907002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 24205830 - 24205934
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  |||||||||||||||||||||||||||||||   ||||||||||||| | ||||  | | |||||||||    
T  24205830 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatccgcaacggctctttcccttctttgtgagtaacggctc 24205929  T
Q  195 tttct 199  Q
    |||||    
T  24205930 tttct 24205934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 31475038 - 31474970
Alignment:
Q  27 tgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatg 95  Q
    |||||||||||||||||||||  ||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  31475038 tgttaacggaggtgacgtgtactgttaaccgcttacaatgcttaccacgtcagatgtcacgcaagcatg 31474970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 2359394 - 2359460
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccc 261  Q
    |||||||||||||| |||||| ||||||||||||| ||| ||||||||| ||||||| |||||||||    
T  2359394 tttcttccccaaatctataaaattgaaaccctaattttacaatttgtcatctagagtccaaaatccc 2359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 19581646 - 19581710
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc 159  Q
    |||||||||||||||||||  | ||||||| ||||||||||||| || |||||||||||||||||    
T  19581646 ggaccaaattgattgattttcagaaaattgccaaggaccaaatttattgattttcagaaaattgc 19581710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 16377026 - 16377064
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16377026 aacggctctttctcctcttcctcattaacggctctttct 16377064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 37022042 - 37021968
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||| |||||| |||||||||||||    
T  37022042 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcacaaaatt-ccaacggctcttt 37021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 363485 - 363405
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||||| | ||||||||||||    
T  363485 tttcttccccaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatcctcaaaatttcttcca 363405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 11021817 - 11021905
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  11021817 aacggctatttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 11021905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 26581245 - 26581286
Alignment:
Q  229 tgttataatttgtcacctagagttcaaaatcccccaaatttc 270  Q
    ||||||||||||||||||| |||||||||| ||| |||||||    
T  26581245 tgttataatttgtcacctaaagttcaaaattcccaaaatttc 26581286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 28247974 - 28247894
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  28247974 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 28247894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 24226685 - 24226970
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||| |||||| ||||||    
T  24226685 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttgacctcttacaaggcttaccacgtcagatatcacacaagcagggacca 24226784  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  24226785 aattgattgatttagagaaaattgtcaaggaccaaattgatggattttcagaaaattgccaac-gatctttctcctcttcctcattaacggctctttctt 24226883  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  24226884 ccccaaatatataaatttgaaaccctaatgttataatttgccacttagagttcaaaatcccccaaatttcttccatgaattgatgtc 24226970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 45361261 - 45360967
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||    
T  45361261 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagggacca 45361162  T
Q  101 aattgattgattt--ataaaa-----aa--ttgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacgg 191  Q
    |||||||  ||||  ||||||     ||  ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  45361161 aattgatgtattttcataaaattgccaacgttgccaaggaccaaattgatggattttcagaaaattgccaacagctctttctcctctccctcattaacgg 45361062  T
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  45361061 ctctttcttccccaaatat-taaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacaagaattgatgtc 45360967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 37114045 - 37114346
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  37114045 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcagatgccacgcaagcagggacca 37114144  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctc-----------------ctcttcctc 183  Q
    |||||||||||||| | ||||||| ||| || |||||||||||||||||||||||||||||| |||||||||||                 |||||||||    
T  37114145 aattgattgatttacagaaaattgccaatgatcaaattgatggattttcagaaaattgccaatggctctttctcctctttctcattaacggctcttcctc 37114244  T
Q  184 attaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattga 283  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  37114245 attaacggctctttcttccccaa--atataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccagatttcttccataaattga 37114342  T
Q  284 tgtc 287  Q
    ||||    
T  37114343 tgtc 37114346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 38472379 - 38472667
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||  |||||||||||||||||||     
T  38472379 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaaacagagaccaaattgattgatttac 38472478  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctc-----------------tttctcctcttcctcattaacggctctttc 198  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||| |||||||||||||  |||||     
T  38472479 agaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcattaacggctttttctccttttcctcattaacgattcttta 38472578  T
Q  199 ttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38472579 ttccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccgaatttcttccatgaattgatgtc 38472667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 47384398 - 47384700
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||    
T  47384398 aaatcagtccctccgttaagttggtatgttaacggaggtgacatgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagtgacca 47384497  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg----------------ccaacggctctttctcctcttcctca 184  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||                |||||| || ||||||||||| |||     
T  47384498 aattgattgatttacataaaattgtcaaggaccaaattgattgattttcagaaaattgccaaggaccaaaattcccaacgactatttctcctctttctct 47384597  T
Q  185 ttaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgat 284  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  47384598 ttaacggctatttcttccccaattatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatgtcttccatgaattgat 47384697  T
Q  285 gtc 287  Q
    |||    
T  47384698 gtc 47384700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 6605382 - 6605192
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |    
T  6605382 aaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggacta 6605283  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacgg 191  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  6605282 aattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttgctcttctttctcattaacgg 6605192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 35691531 - 35691729
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| | || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  35691531 aaatcagtcccttcactaaattggtctgttaacggaggtggcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 35691630  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||    
T  35691631 aattgattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgccaacggctctttctcttctttgtcattaacggcgctttct 35691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 126 - 287
Target Start/End: Complemental strand, 13169500 - 13169340
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccc 225  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||    
T  13169500 caaggactaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacagctctttcttccccaaatatataaatttg-gaccc 13169402  T
Q  226 taatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  13169401 taatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtc 13169340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 37791758 - 37792051
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||| ||| ||||||    
T  37791758 aaatcaatccatccattaagttggcatgttaacggaggtgacgtgtaccgttaaccacttacaaggcttaccacgtcagatgccatgcaggcagggacca 37791857  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg--------ccaacggctctttctc---------ctcttcctc 183  Q
    |||||||||||||| ||||||||| |||| ||||| ||||| ||||| ||||||||||        |||||   ||||| ||         ||||| |||    
T  37791858 aattgattgatttacaaaaaattgccaagaaccaacttgattgatttacagaaaattgcaaaatttccaacatatctttttcccccaacatctctttctc 37791957  T
Q  184 attaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaa 279  Q
    || ||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  37791958 atgaacg--tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccaaaaatttcttccctgaa 37792051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 34775102 - 34775265
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||    
T  34775102 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggacca 34775201  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  34775202 aattgattgatttacagaaaattgtcaaggactaaattgatggattttcataaaattgccaacg 34775265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39857749 - 39857912
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| || ||||||    
T  39857749 aaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaaacagggacca 39857848  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  39857849 aattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgccaacg 39857912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13169668 - 13169505
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||| ||||||    
T  13169668 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgttagatgtcacgcaagcagggacca 13169569  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  13169568 aattgattgatttacataaaattgccaatgaccaaattggtggattttcagaaaattgccaacg 13169505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 39857969 - 39858095
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  39857969 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcc 39858068  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||| ||||||||||||||    
T  39858069 cccaaatttcttacatgaattgatgtc 39858095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23904687 - 23904898
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaagg--------------tttaccacgtcagatgccac 86  Q
    |||||||||| ||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||              |||||||||||||||| |||    
T  23904687 aaatcagtccctccattaagttagtccgttaaggaaggtgacgtgtaacgttaacctcttacaaggctcctcttacaaggtttaccacgtcagatgtcac 23904786  T
Q  87 gcaagcatggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcatt 186  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  23904787 gcaagcagggaccaaattgattgatttatagaaaatt-tcaaggaccaaattgatgaattttcagaaaattgtcaacggctctttctcctctttctcatt 23904885  T
Q  187 aacggctctttct 199  Q
    |||| ||||||||    
T  23904886 aacgactctttct 23904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 23904886 - 23905013
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttcccc-aaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatc 259  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23904886 aacgactctttctcctcttccttattaacgactctttcttcccccaaatatataaatttggaaccctaatgttataatttgtcaactagagttcaaaatc 23904985  T
Q  260 ccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||||||||||||    
T  23904986 ccccaaatttcttccatgaattgatgtc 23905013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 22155657 - 22155532
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||    
T  22155657 aacggctctttctcctcttcctcattaacatctctttcttccccaaatatataaattggaa-ccttaatgttataatttgtcacttagagttcaaaatcc 22155559  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  22155558 cccaaatttcttccatgaattgatgtc 22155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 22211572 - 22211447
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||    
T  22211572 aacggctctttctcctcttcctcattaacatctctttcttccccaaatatataaattggaa-ccttaatgttataatttgtcacttagagttcaaaatcc 22211474  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  22211473 cccaaatttcttccatgaattgatgtc 22211447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 22211731 - 22211560
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||            |||||||||||| |||||||||| |||||||||     
T  22211731 ttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggctt------------gccacgcaagcagggaccaaattaattgatttac 22211644  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  22211643 agaaaattgccaaggaccaaattgatggattttcagaaaattgccaactgctttttctcctctttcttattaacggctctttct 22211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 97 - 284
Target Start/End: Original strand, 38549739 - 38549934
Alignment:
Q  97 accaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc--------caacggctctttctcctcttcctcattaa 188  Q
    |||||||| ||||||||  | || |||| |||||||||||||||| |||||| ||||||||||        ||| |||| ||||||||||| ||||| ||    
T  38549739 accaaattcattgattttcagaatattgccaaggaccaaattgattgatttttagaaaattgcaaaattcccaatggctttttctcctctttctcatgaa 38549838  T
Q  189 cggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgat 284  Q
    || || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38549839 cgactatttcttccctaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgat 38549934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 34775334 - 34775457
Alignment:
Q  164 ggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccc 263  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||    
T  34775334 ggctctttctcctcttcctcattaactactctttcttccctaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctccc 34775433  T
Q  264 aaatttcttccatgaattgatgtc 287  Q
    ||||||||| ||||||||||||||    
T  34775434 aaatttcttacatgaattgatgtc 34775457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 6605188 - 6605070
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    |||||| |||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6605188 tttctcatcttcctcattaatagctatttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatt 6605089  T
Q  269 tcttccatgaattgatgtc 287  Q
    |||||||||||||||||||    
T  6605088 tcttccatgaattgatgtc 6605070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 22155816 - 22155645
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||            |||||||||||| |||||||||| |||||||||     
T  22155816 ttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggctt------------gccacgcaagcagggaccaaattaattgatttac 22155729  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    | ||||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  22155728 agaaaattgccaaggaccaaatttatggattttcagaaaattgccaactgctttttctcctctttcttattaacggctctttct 22155645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 27664732 - 27664858
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  27664732 aacggctctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 27664831  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  27664832 ccaaaatttcttccatgaattgatgtc 27664858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 29995201 - 29995327
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| | || ||| |||||||||||    
T  29995201 aacggctctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataatttcttacatagggttcaaaatcc 29995300  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  29995301 ccaaaatttcttccatgaattgatgtc 29995327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29994981 - 29995142
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| |||| | || |||||||| |||||||||||||| ||||||    
T  29994981 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccacgtcatatgccacgcaagcagggacca 29995080  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  29995081 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 29995142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48227926 - 48227799
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  48227926 aaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaatgcttaccacgtcagatgccacgcaagcagggacca 48227827  T
Q  101 aattgattgatttataaaaaattgtcaa 128  Q
    |||||||  ||||  | |||||||||||    
T  48227826 aattgatgaattttcagaaaattgtcaa 48227799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 46437925 - 46438051
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  46437925 aacggctctttctcttcttcctcattaacaactatttcttccccaaatatataaatttggaaccctaatgttataatttatcacatagagttcaaaatcc 46438024  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
     ||||||||||||||| || |||||||    
T  46438025 tccaaatttcttccataaactgatgtc 46438051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27664534 - 27664744
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  27664534 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 27664633  T
Q  101 aattgattga------------tttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaa 188  Q
    || ||||| |            |||| | ||||||  |||||||||| |||||||||||||||||||||| ||||||||||||| | ||||  | | |||    
T  27664634 aactgattaatttactcaaaattttacacaaaatttccaaggaccaatttgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaa 27664733  T
Q  189 cggctctttct 199  Q
    |||||||||||    
T  27664734 cggctctttct 27664744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 161 - 285
Target Start/End: Complemental strand, 77814 - 77690
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||    || |||||||||||||||    
T  77814 aacggctctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccgtacatagagttcaaaatcc 77715  T
Q  261 cccaaatttcttccatgaattgatg 285  Q
    || ||||||||||||| ||||||||    
T  77714 ccaaaatttcttccataaattgatg 77690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 35402293 - 35402419
Alignment:
Q  161 aacggctctttctcctcttcctcattaac-ggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatc 259  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||||||||||    
T  35402293 aacgactctttctccacttcctcattaaaaggctatttcttccccaaatatataaatttggaaccctaatgttataatttcttacatagagttcaaaatc 35402392  T
Q  260 ccccaaatttcttccatgaattgatgt 286  Q
    ||| |||||||||||||||||||||||    
T  35402393 cccaaaatttcttccatgaattgatgt 35402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 20479485 - 20479360
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  20479485 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 20479386  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  20479385 ccaaaatttcttccataaattgatgt 20479360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 35403384 - 35403259
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  35403384 aacggctctttctccacttccttattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 35403285  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||| |||||||||||||    
T  35403284 ccaaaatttctttcatgaattgatgt 35403259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35403604 - 35403443
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||| ||||| |||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  35403604 aaatcagtccctccgttaaattggtatgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 35403505  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || |||||| |||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  35403504 aactgattggtttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 35403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20479704 - 20479548
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||| ||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  20479704 aaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggacca 20479605  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| | |||||| |||||||||||||| || ||||||    
T  20479604 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt 20479548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 46437825 - 46437937
Alignment:
Q  87 gcaagcatggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcatt 186  Q
    ||||||| ||||||||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  46437825 gcaagcagggaccaaattgattgatttactgaaaattgcaaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcattctcatt 46437924  T
Q  187 aacggctctttct 199  Q
    |||||||||||||    
T  46437925 aacggctctttct 46437937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 77999 - 77802
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||| ||||| || ||||||||||||||   |||| | |||||| |||||||  || ||||||| ||||||    
T  77999 aaatcagtccctccgttaagttggtctgttaacagaggttacatgtaacgttaaccttcgacaaagcttaccatgtcagatttcatgcaagcagggacca 77900  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    || ||||||||||| | ||||||  ||||||||||||||||||| || |||||||||| |||||||| |||||| ||||  | | ||||||||||||||    
T  77899 aactgattgatttacacaaaatttccaaggaccaaattgatgga-ttccagaaaattggcaacggctatttctcttctttgtgagtaacggctctttct 77802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 35691717 - 35691843
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||  |||||||||||||||||| ||||| |||||||||||||||    
T  35691717 aacggcgctttctcctcttcctcattaacgattgtttcttccccaaatatataaattttgaaccctaatgttataattcgtcacatagagttcaaaatcc 35691816  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
     | | ||||||||||||||| ||||||    
T  35691817 tcaatatttcttccatgaatcgatgtc 35691843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 35402073 - 35402229
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| | ||| |||||||||||||| | ||||| ||||||    
T  35402073 aaatcagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttatcacgtcagatgccatgtaagcagggacca 35402172  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||| ||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  35402173 aactgattaatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 35402229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46437211 - 46437299
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgca 89  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  46437211 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttaccacgtcagatgccacgca 46437299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 13036314 - 13036216
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| |||||||||||||||||||||||||||| || ||| || |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  13036314 aacgtctctttcttccccaaatatataaatttggaatccttattttataatttgtcacctagagttcaaaatccccaaaatttcttccattaattgatg 13036216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 34775270 - 34775343
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  34775270 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctttttctcattaatggctctttct 34775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 48227774 - 48227707
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaa 228  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  48227774 aacggctctttctcctcttcctcattaacgactctttcttccccaaatatataaatttggaaccctaa 48227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 48227832 - 48227762
Alignment:
Q  129 ggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  48227832 ggaccaaattgatgaattttcagaaaattgtcaacggctctttctcctctttctcattaacggctctttct 48227762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 29995109 - 29995213
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||| ||| | ||||  | | |||||||||    
T  29995109 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctcgttcccttctttgtgagtaacggctc 29995208  T
Q  195 tttct 199  Q
    |||||    
T  29995209 tttct 29995213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 48311548 - 48311452
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| ||||||||||||||||||||||  |||| |||| |||| ||||||||||||||||||| |||||||||| | ||||||||| ||| ||||||||    
T  48311548 aacgtctctttcttccccaaatatata--tttggaaccttaattttataatttgtcacctagaattcaaaatcctcaaaatttctttcattaattgatg 48311452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 35402201 - 35402278
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | |||||| |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35402201 ggacgaaattgatggatttacacaaaattttcaaggactaaattgatggattttcagaaaattggcaacggctctttc 35402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 35403476 - 35403372
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||| |||| | ||||  | | |||||||||    
T  35403476 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctttttcccttctttgtgagtaacggctc 35403377  T
Q  195 tttct 199  Q
    |||||    
T  35403376 tttct 35403372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 20479576 - 20479501
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  20479576 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 20479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13039627 - 13039536
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagc 92  Q
    ||||||||||||   ||||||||| |||||||| |||||||||| || |||||||| ||||||||  ||||||||| ||||| |||||||||    
T  13039627 aaatcagtccatatgttaagttggcctgttaacagaggtgacgtttaccgttaaccgcttacaagacttaccacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38549651 - 38549714
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaa 64  Q
    |||||||||| | | ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38549651 aaatcagtcccttcgttaagttggtctgttaacgaaggtgacgtgtaccgttaacctcttacaa 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 3921005 - 3921096
Alignment:
Q  189 cggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaatt 281  Q
    |||||||||||||||| ||| |||||| |||||| ||||||  || ||| ||| | ||| ||| |||||||||| ||||||||||||| ||||    
T  3921005 cggctctttcttccccgaatctataaaattgaaa-cctaattctacaatctgtaatctatagtacaaaatccccaaaatttcttccattaatt 3921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 7403592 - 7403496
Alignment:
Q  189 cggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||| ||||||| ||| || ||| ||||||| | ||| ||| ||| | ||||||| ||||||| || | ||||||||||| ||||||||    
T  7403592 cggctctttctttcccaaatctattaaattggaaccctagttttacaatatgtaatctagagtccaaaatctccaagatttcttccattaattgatg 7403496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 34692562 - 34692520
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||    
T  34692562 aacggctatttcttccccaaatatataaaattggaaccctaat 34692520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 34784303 - 34784345
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    |||| |||||||||||||||||||||||| ||| |||||||||    
T  34784303 aacgactctttcttccccaaatatataaaattggaaccctaat 34784345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 48302436 - 48302478
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  48302436 aacggctatttcttccccaaatatataaaattgaaactctaat 48302478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 11685465 - 11685384
Alignment:
Q  191 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttctt 272  Q
    ||||||||| ||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || |||||||||    
T  11685465 gctctttctcccccaaatatataaaattggaaccctaattttacaatctgtaatctacactccaaaatctccaaaatttctt 11685384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 30108857 - 30108937
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  30108857 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 30108937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 38549714 - 38549770
Alignment:
Q  106 attgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||||| | ||||||| |||| |||||||| || ||||||||||| ||||||||    
T  38549714 attgatttacagaaaattgccaagaaccaaattcattgattttcagaatattgccaa 38549770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 49524718 - 49524432
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||| ||||||    
T  49524718 aaatcagtccttccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttaccaggcttaccacgtcatatgtcacgcaagcagggacca 49524619  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||| |||||||||    
T  49524618 aattgattgatttacagaaaattgtcaaggaccaaattgatggattttgagaaaattgtcaacggctctttcttctctttctcattaacgactctttctt 49524519  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  49524518 ccccaagtatataaatttggaaccctaatgttataatttgtcacctggagttcaaaatcccccaaatttcttacatgaattgatgtc 49524432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 54387867 - 54387577
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||| |    
T  54387867 aaatcagttcatccgttaagttggtctgttaacggaggtga-gtgtaccgttaacctcttacaaggcttaccacgtcaaatgccacgcaagcagggacta 54387769  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg-------ccaacggctctttctcctcttcctcattaacggct 193  Q
    || ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||       || ||| |||||||||||||| ||||  |||| ||    
T  54387768 aactgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgcaaaattcccacgactctttctcctctttctcaagaacgact 54387669  T
Q  194 ctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  54387668 ctttctgccctaaatatataaatttggaaccctaatgttacaatttgtcacctagagttcaaaatcctcaaaatttcttccatgaattgatg 54387577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 20493931 - 20494127
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  20493931 aaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggacca 20494030  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||  ||| |||||||||| ||||||||    
T  20494031 aattgattgatttacataaaattggcaaggaccaaattgatggattttcagaaaattgtcaacagctctttctc--ctttctcattaacgactctttct 20494127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 129 - 287
Target Start/End: Original strand, 11254316 - 11254474
Alignment:
Q  129 ggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaa 228  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11254316 ggaccaaattgatggattttcataaaattgtcaacggctctttctcctcttcctcattaacagctctttcttccccaaatatataaatttgaaaccctaa 11254415  T
Q  229 tgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  11254416 tgttataatttgtcacctagagttcaaaatcccccaaaattcttccattaattgatgtc 11254474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 35401853 - 35402051
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||    
T  35401853 aaatcagtccctccgttaagctggtctgttaacggaggtgacgtgtaacgttaacctcttacaaaccttaccacgtcagatgccacgcaagcagggacca 35401952  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  35401953 aattgattgatttacagaaaattgccaagcaccaaattgatggattttcataaaattgccaacggctctttcttctctttctcattaacgactctttct 35402051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 51013871 - 51013693
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  51013871 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 51013772  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctt 179  Q
    || ||||| ||||| | ||||||  ||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||    
T  51013771 aactgattaatttacacaaaatttccaaggaccaaattgatggatttttagaaaattggcaacggctatttctcttctt 51013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 35402039 - 35402164
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  35402039 aacgactctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttc-aaatcc 35402137  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  35402138 cccaaatttcttccatgaattgatgtc 35402164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 48645379 - 48645520
Alignment:
Q  21 ttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttataaaaa 120  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| | |||    
T  48645379 ttggtctgttaacgaaggtgacgtgtattgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaa 48645478  T
Q  121 attgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  48645479 attgtcaaggatcaaattgattgattttcagaaaattgccaa 48645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 43521094 - 43520933
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||| | ||| |||||||| |||||||||| ||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  43521094 aaatcagttcttccgttaagttgttctgttaacgtaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 43520995  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | |||||| ||||||||||||||||||||||| || |||||| ||||    
T  43520994 aactgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaaatttccaa 43520933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33264486 - 33264648
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||| ||||||||||||    
T  33264486 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgtaagcatggacca 33264585  T
Q  101 aattgattgatttataaaaaattgtc-aaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || |||||||||||   |||||| || |||||| |||||||||||||| || |||||| ||||    
T  33264586 aactgattgatttacgcaaaattttcgaaggacgaaattgatggatttacacaaaatttccaa 33264648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 320665 - 320540
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  320665 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 320566  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  320565 ccaaaatttcttccatgaattgatgt 320540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33265995 - 33265834
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  33265995 aaatcagtccctccgttaagttagtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 33265896  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  33265895 aactgattgatttacataaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 33265834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 43507491 - 43507616
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||    
T  43507491 aacgactctttctccacttcctcattaaaggctatttcttccccaaatatataaatttgaaaccctaatgttataattccttacatagagttcaaaatcc 43507590  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  43507591 ccaaaatttcttccatgaattgatgt 43507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 320882 - 320724
Alignment:
Q  4 tcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaat 103  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||||     
T  320882 tcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaac 320783  T
Q  104 tgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  320782 tgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 320724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 4172436 - 4172561
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  4172436 aacgactctttctccacttcctcattaaaggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 4172535  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  4172536 ccaaaatttcttccatgaattgatgt 4172561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 33264707 - 33264832
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  33264707 aacggctctttctccacttcctcattaagggatatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 33264806  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  33264807 ccaaaatttcttccatgaattgatgt 33264832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 33265775 - 33265650
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  33265775 aacgactctttctccacttcctcattaaaggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 33265676  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  33265675 ccaaaatttcttccatgaattgatgt 33265650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39345668 - 39345805
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||| ||||||    
T  39345668 aaatcagtctctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacataagatgccacacaagcagggacca 39345767  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaatt 138  Q
    |||||||||||||| | ||||||| |||||| ||||||    
T  39345768 aattgattgatttacagaaaattgccaaggatcaaatt 39345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43507271 - 43507432
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  43507271 aaatcagtccctccgttaagttggactgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggacca 43507370  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  43507371 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 43507432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 43508638 - 43508477
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||| ||||||||| ||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  43508638 aaatcagtccctccgttaagttggcctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 43508539  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  43508538 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 43508477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 43520874 - 43520750
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | ||  ||||||||||||||    
T  43520874 aacggctctttctcctcttccttattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttac--agagttcaaaatcc 43520777  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  43520776 ccaaaatttcttccatgaattgatgtc 43520750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 2691680 - 2691778
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  2691680 aacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctccaaaatttcttccattaattgatg 2691778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 4173722 - 4173564
Alignment:
Q  4 tcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaat 103  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||| |||| | |||||||||||||||||||||||||| ||||||||     
T  4173722 tcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacatctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaac 4173623  T
Q  104 tgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  4173622 tgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 4173564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 835027 - 834866
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||||| ||||||    
T  835027 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggacca 834928  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||| |||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  834927 aattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaa 834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 4173505 - 4173380
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||  | || |||||||||||||||    
T  4173505 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttatacttccttacatagagttcaaaatcc 4173406  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    |  |||||||||||||||||||||||    
T  4173405 ctaaaatttcttccatgaattgatgt 4173380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5439632 - 5439471
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||||| ||||||    
T  5439632 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggacca 5439533  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||| |||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  5439532 aattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaa 5439471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 43508418 - 43508293
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  43508418 aacggctctttctccacttcctcattaagggctatttctttcccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 43508319  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||| ||||||||||||||||    
T  43508318 ccaaaatttattccatgaattgatgt 43508293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 42982437 - 42982314
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||| |||| |||||||  ||||||||||||||||||| |||||| ||||||    
T  42982437 aaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttgaccttttacaagccttaccacgtcagatgccacacaagcagggacca 42982338  T
Q  101 aattgattgatttataaaaaattg 124  Q
    |||||||||||||| | |||||||    
T  42982337 aattgattgatttagagaaaattg 42982314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 51013677 - 51013559
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||  | || || |||||||||||||| |||||    
T  51013677 tttctcctcttcctcattaagggctatttctttcccaaatatataaatttggaaccctaatgttataattccttacatatagttcaaaatccccaaaatt 51013578  T
Q  269 tcttccatgaattgatgtc 287  Q
    |||||||||||||||||||    
T  51013577 tcttccatgaattgatgtc 51013559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 833327 - 833488
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||||| ||||||    
T  833327 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggacca 833426  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||  ||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  833427 aattgatgaatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaa 833488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5437915 - 5438076
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| |  || |||||||||||||||||||||| ||||||    
T  5437915 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaacacgtcagatgccacgcaagcagggacca 5438014  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||| |||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  5438015 aattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaa 5438076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 192 - 274
Target Start/End: Complemental strand, 42982248 - 42982166
Alignment:
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcc 274  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42982248 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacttagagttcaaaatcccccaaatttcttcc 42982166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 319381 - 319538
Alignment:
Q  5 cagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaatt 104  Q
    |||||| ||| |||||||||||||||||| |||||||||||| |||||||||||| ||||   ||||||||||||||| |||||||||| |||||||| |    
T  319381 cagtccctccgttaagttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaaacttaccacgtcagatgtcacgcaagcagggaccaaact 319480  T
Q  105 gattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||| | ||||||   |||||| ||||||||| |||| || |||||| ||||    
T  319481 gattgatttacacaaaatttcgaaggacgaaattgatgtatttacacaaaatttccaa 319538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 319597 - 319721
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||| |    
T  319597 aacgactctttctccacttcttcattaaaggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaat-c 319695  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  319696 ccaaaatttcttccatgaattgatgt 319721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11254223 - 11254349
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||| ||||||| ||||||    
T  11254223 aaatcagtccctccgttaagttggtttgttaacggaggtgatgtgtaacgttatc-tcttacaaggcttaccacgtcagatgccatgcaagcagggacca 11254321  T
Q  101 aattgattgatttataaaaaattgtcaa 128  Q
    ||||||| |||||  | |||||||||||    
T  11254322 aattgatggattttcataaaattgtcaa 11254349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 41759564 - 41759659
Alignment:
Q  127 aaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaa 222  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  41759564 aaggaccaaattgatggattttcagaaaattggcaacgagtctttctcctctttctcgttaacggctctttctttcccaaatatataaatttgaaa 41759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 5439412 - 5439299
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||| ||| ||||||||||  | || |||||||||||||||    
T  5439412 aacggctctttctccacttcctcatttaaggctatttcttccccaaatatataaatttggaactctactgttataattccttacatagagttcaaaatcc 5439313  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  5439312 ccaaaatttcttcc 5439299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 11641857 - 11641764
Alignment:
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  11641857 ctctttcttccccaaatatatgatatcgaaaccctaatgttataatttgtcaactagagttcaaaatccccaaaatttcttccatggattgatg 11641764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 833547 - 833660
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||| ||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||| ||| ||||||||||  | || |||||||||||||||    
T  833547 aacggctttttctccacttcctcatttaaggctatttcttccccaaatatataaatttggaactctactgttataattccttacatagagttcaaaatcc 833646  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  833647 ccaaaatttcttcc 833660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 5438135 - 5438231
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaa 257  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||    
T  5438135 aacggctctttctccacttcctcatttaaggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaa 5438231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 20820285 - 20820383
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| ||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||  ||||||||    
T  20820285 aacgtctctttctttctcaaatatataaatttggaaccctaattttataatttgtcacctaaagtttaaaatccccaaaatttcttccactaattgatg 20820383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 4169794 - 4169876
Alignment:
Q  5 cagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacg 87  Q
    |||||| ||| ||||||||||||||||| ||||||||||||| |||||||||||| |||| | ||||||||||||||||||||    
T  4169794 cagtccctccgttaagttggtctgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacg 4169876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 834807 - 834710
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttcccc-aaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaa 257  Q
    ||||||||||||||| |||||||||| | |||| |||||||||| ||||||||||||||| ||||||||||||||||||  | || ||||||||||||    
T  834807 aacggctctttctccacttcctcatttaaggctatttcttcccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaa 834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 320757 - 320653
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  320757 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 320658  T
Q  195 tttct 199  Q
    |||||    
T  320657 tttct 320653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 33264615 - 33264719
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  33264615 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 33264714  T
Q  195 tttct 199  Q
    |||||    
T  33264715 tttct 33264719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 43508510 - 43508406
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  43508510 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 43508411  T
Q  195 tttct 199  Q
    |||||    
T  43508410 tttct 43508406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 20494115 - 20494182
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaa 228  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20494115 aacgactctttctcctcttcttcattaacgactctttcttccccaaatatataaatttggaaccctaa 20494182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 41760068 - 41760143
Alignment:
Q  213 aaatttgaaaccctaatgttataatttgtcacctagagttcaaaa-tcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||    
T  41760068 aaatttgaaaccctattgttataatttgtcacatagagttcaaaattccccaaaatttcttccatgaattgttgtc 41760143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 4172344 - 4172421
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  4172344 ggacgaaattgatggatttacacaaaattttcaaggaccaaattgatggattttcagaaaattggcaacgactctttc 4172421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 33265867 - 33265790
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33265867 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 33265790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 43507399 - 43507476
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  43507399 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 43507476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 834899 - 834795
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| | ||||  | | |||||||||    
T  834899 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctctttcccttctttgtgagtaacggctc 834800  T
Q  195 tttct 199  Q
    |||||    
T  834799 tttct 834795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 4173597 - 4173493
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  | | |||||||||    
T  4173597 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttttagaaaattgacaacggctctttcccttctttgtgagtaacggctc 4173498  T
Q  195 tttct 199  Q
    |||||    
T  4173497 tttct 4173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 43520966 - 43520862
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||||  | | |||||||||    
T  43520966 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattggcaacgactctttcccttctttgtgagtaacggctc 43520867  T
Q  195 tttct 199  Q
    |||||    
T  43520866 tttct 43520862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 26397715 - 26397634
Alignment:
Q  191 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttc 273  Q
    |||||||||||| ||||| |||||| ||  ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  26397715 gctctttcttcctcaaatctataaaattagaaccctaat-ttataatttgtcatctagagttcaaaatccccaaaatttcttc 26397634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 833455 - 833531
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||    
T  833455 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctcttt 833531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 5438043 - 5438147
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  |||| |||||||| | ||||  | | |||||||||    
T  5438043 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacagctctttcccttctttgtgagtaacggctc 5438142  T
Q  195 tttct 199  Q
    |||||    
T  5438143 tttct 5438147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 28100859 - 28100957
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||| |||||||||||||||| |||||| ||||||| |||||  || ||||| | | ||||||| |||||| ||| ||||||||||||| ||||||||    
T  28100859 aacggttctttcttccccaaatctataaaattgaaactctaattgtacaatttataatctagagtccaaaattcccaaaatttcttccattaattgatg 28100957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2691477 - 2691566
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaa 90  Q
    ||||||||| |||| ||||||||| ||||||| |||||||| ||| | |||||| | ||||||||  ||||||||||| |||||||||||    
T  2691477 aaatcagtcaatccgttaagttggcctgttaagggaggtgatgtgcatcgttaatcgcttacaagacttaccacgtcaaatgccacgcaa 2691566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 5439504 - 5439428
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  |||||| |||||||||||||||||||||||||  ||||||||||||    
T  5439504 ggactaaattgatggatttacacaaaatttccaaggatcaaattgatggattttcagaaaattcgcaacggctcttt 5439428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 11641943 - 11641883
Alignment:
Q  99 caaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc 159  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||| ||| |||||||    
T  11641943 caaattgattgatttacagaaaattgtcaaggaccaaattgattgatttacaggaaattgc 11641883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 319505 - 319582
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| ||||||||  ||||| | ||||||  ||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  319505 ggacgaaattgatgtatttacacaaaatttccaaggaccaaattgatgaattttcagaaaattggcaacgactctttc 319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 48645491 - 48645551
Alignment:
Q  99 caaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc 159  Q
    |||||||||||||||  | ||||||| |||||| ||||||||| |||||||||||||||||    
T  48645491 caaattgattgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgc 48645551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 4172298 - 4172372
Alignment:
Q  83 ccacgcaagcatggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    ||||||||||| |||||||| ||||||||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  4172298 ccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 4172372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 11641743 - 11641686
Alignment:
Q  228 atgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||||| |||||||||| ||||  | |||||||||| |||||||||||    
T  11641743 atgttataatttgtcaactagagttcagaatctacaaaatttcttcgatgaattgatg 11641686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 11642058 - 11641996
Alignment:
Q  4 tcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaagg 66  Q
    ||||||||||  |||||||||  ||||||||||||||||||||| | |||||| |||| ||||    
T  11642058 tcagtccatctgttaagttggcttgttaacggaggtgacgtgtaccattaaccgcttataagg 11641996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 32653438 - 32653350
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||| ||||||||| ||||||||||| ||||||| ||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  32653438 aacggctatttcttcccaaaatatataaaattgaaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 32653350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 39190618 - 39190538
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  39190618 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 39190538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 39922806 - 39922726
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  39922806 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 39922726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 42879576 - 42879656
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  42879576 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 42879656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 21350590 - 21350295
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  21350590 aaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 21350491  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctct---------ttctcctcttcctcattaacgg 191  Q
    |||||||||||||| | ||||||| |||| |||||||||||| ||||||||||||||||||||||||||         ||||||||||||| |||||||     
T  21350490 aattgattgatttacagaaaattgccaagaaccaaattgatgaattttcagaaaattgccaacggctctttcttctctttctcctcttccttattaacga 21350391  T
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21350390 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagtttaaaatcccccaaatttcttccatgaattgatgtc 21350295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17516958 - 17516760
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  17516958 aaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggacca 17516859  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  17516858 aattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgccaatggctctttctcctctgtctcattaacggctctttct 17516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 42282458 - 42282175
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42282458 aaatcagtccctccgttaagttggtatgttaaccgaggtgacatgtaccgttaacctcttacaaggtttaccacgtcagatgccacgcaagcagggacca 42282359  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||||||||||||| | ||||||| |||||||||||||||| | |||| |||||||||| ||   | |   |  ||||| ||||| |||| |||||||||    
T  42282358 aattgattgatttacagaaaattgccaaggaccaaattgattgtttttaagaaaattgcaaaattc-ccaacggctctttctcatgaacgactctttctt 42282260  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||| ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  42282259 ccctaaatatataaatttggaaccctaatgttataatttgtcacatagaattcaaaatccccaaaatttcttccatgaattgatg 42282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 54412532 - 54412334
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||    
T  54412532 aaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaaccttttacaatgcttaccacgtcagatgccacgcaagcagggacca 54412433  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  54412432 aattgattgatttacagaaaattgccaaggaccaaattgatggattttcataaaattgtcaacggctctttctcctctttctcattaacggttctttct 54412334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 23291674 - 23291864
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  23291674 aaatcagtccctccgttaagttagtctgtta-cagaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 23291772  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggc 192  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23291773 aattgattaatttacagaaaattgtcgaggaccaaattgatggattttcagaaaattgccaacgactctttctcctctttctcattaacggc 23291864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 44268085 - 44268283
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||    
T  44268085 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcctacaaggtttaccacgtcagttgccacgtaagcagggacca 44268184  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||| |||||||| | ||||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||| || |||||||    
T  44268185 aattggttgatttacagaaaattgccaaggaccaaattgatggacttttagaaaattgccaatggctctttctcctctttctcattaatggttctttct 44268283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 30598441 - 30598639
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||  |||||    
T  30598441 aaattagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaaactcttacaaggcttgccacgtcagataccacgcaagcagagacca 30598540  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||| |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||  |||||||    
T  30598541 aatagattgatttacagaaaattgtcaatgaccaaattgatggattttcagaaaattgccaacggctttttctcctctttttcattaacgattctttct 30598639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 43767032 - 43766835
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||| |||||||||| ||||||    
T  43767032 aaatcagtcactccgttacgttggtctgttaacggaggtgatgtgtaacgttaacctcttataaggcttaccacgtcaaatgtcacgcaagcagggacca 43766933  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||||   |||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  43766932 aattgattgatttacggaaaattgtcaaggaccaaattgat-gatttttggaaaattgccaatggctctttctcctctttctcattaacggctctttct 43766835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46114090 - 46113929
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||    
T  46114090 aaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccatgtcagatgccacgcaagcagagacca 46113991  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||||    
T  46113990 aattgattgatttacagaaaattgtcaaggactaaattgatggattttcagaatattgccaa 46113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 7883432 - 7883610
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  7883432 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 7883531  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctt 179  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||    
T  7883532 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcaaaaaattggcaacggctatttctcttctt 7883610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 41979337 - 41979159
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  41979337 aaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 41979238  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctt 179  Q
    || ||||||||||| | |||||| || ||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  41979237 aactgattgatttacacaaaattttcgaggaccaaattgatggattttcagaaaattggcaacggctatttctcttctt 41979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 611207 - 611050
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||    
T  611207 aaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgttagatgccacgcaagcagggatca 611108  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg 158  Q
    |||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||||    
T  611107 aattgattgatttacagaaaattgccaaggactaaattgatggattttcagaaaattg 611050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35903929 - 35904091
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||| ||||||    
T  35903929 aaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacatcagatgccacgcaagcagggacca 35904028  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaac 163  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||    
T  35904029 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaac 35904091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2378968 - 2378805
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||| |||||| |||||||  | ||||||||||||||| |||||||||| ||||||    
T  2378968 aaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaatgttaacatcttacatagcttaccacgtcagatgtcacgcaagcagggacca 2378869  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2378868 aattgattgatttaaagaaaattgccaatgaccaaattgatggattttcagaaaattgccaacg 2378805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 17516772 - 17516646
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  17516772 aacggctctttctcctcttcctcattaacgactctttcttccccaaatatataaatttggaactctaatgttataatttgtaacctagagttcaaaatcc 17516673  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
     ||||||||||||||||||||||||||    
T  17516672 tccaaatttcttccatgaattgatgtc 17516646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 53092727 - 53092888
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  53092727 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggacca 53092826  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  ||| |||||||||||||||||| || |||||| ||||    
T  53092827 aactgattgatttacacaaaatttccaatgaccaaattgatggatttacacaaaatttccaa 53092888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 27897488 - 27897608
Alignment:
Q  167 tctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaa 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  27897488 tctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatccctcaaa 27897587  T
Q  267 tttcttccatgaattgatgtc 287  Q
    |||||| ||||||||||||||    
T  27897588 tttcttacatgaattgatgtc 27897608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 44268277 - 44268397
Alignment:
Q  167 tctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaa 266  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  44268277 tctttctcctcttcctcgttaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaa 44268376  T
Q  267 tttcttccatgaattgatgtc 287  Q
    ||||||||||||||| |||||    
T  44268377 tttcttccatgaattaatgtc 44268397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 54900059 - 54899888
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||| |||| | ||||||||||| ||||||||||||||  |||||    
T  54900059 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacgtctgacaaagcttaccacgtcaaatgccacgcaagcagagacca 54899960  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    || ||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  54899959 aactgattgatttacacaaaattttcaaggaccaaattgatggatttttagaaaattggcaacagctctttc 54899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 2378740 - 2378614
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  2378740 aacggctctttctcctcttccacattaacgactctttcttccccaaatatataaatttggaaccctaatattataatttgttacctagagttcaaaatcc 2378641  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||| ||||||||||||||    
T  2378640 cccaaatttcttacatgaattgatgtc 2378614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 43766847 - 43766722
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  43766847 aacggctctttctcctcttcctcattaacgactttttcttccccaaatatataaatttggaaccctaatgtgataatttgtcacc-agagttcaaaatcc 43766749  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  43766748 cccaaatttcttccatgaattgatgtc 43766722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27897254 - 27897399
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| | ||||||    
T  27897254 aaattagtccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagtagggacca 27897353  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggatt 146  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||    
T  27897354 aattgattgatttacagaaaattgccaaggaccaaattgatggatt 27897399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 51686379 - 51686218
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||  | |||||||| |||||||| |||||||||||| |||||||||||||||| | ||||||||||||||| |||||||||| ||||||    
T  51686379 aaatcagtccctctgtcaagttggtatgttaacgaaggtgacgtgtaccgttaacctcttacaaagcttaccacgtcagatgtcacgcaagcagggacca 51686280  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||    
T  51686279 aattgattgatttacagaaaattgccaaggaccaaattgatcgattttcagaaaattgccaa 51686218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 30598633 - 30598753
Alignment:
Q  167 tctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaa 266  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  30598633 tctttctcctcttcctcattaactactctttctaccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaa 30598732  T
Q  267 tttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||    
T  30598733 tttcttccatgaattgatgtc 30598753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3150356 - 3150517
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||||   |||||    
T  3150356 aaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagacca 3150455  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  3150456 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 3150517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 95 - 285
Target Start/End: Complemental strand, 46113962 - 46113764
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc--------caacggctctttctcctcttcctcatt 186  Q
    |||| |||||||| |||||  | || |||| |||||||||||||||| ||||||||||||||||         ||||| |||||||||||||| ||||||    
T  46113962 ggactaaattgatggattttcagaatattgccaaggaccaaattgattgattttcagaaaattgtaaaattctcaacgactctttctcctctttctcatt 46113863  T
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| || ||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  46113862 aacgcctttttcttccccaaatatataaatttggaaccttaatgttataatttttcgcctagagttcaaaatccccaaaatttcttccatgaattgatg 46113764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 48829460 - 48829617
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||  |||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||| | |||||||||| ||||||    
T  48829460 aaatcagtccctcggttaagttggtctgttaacggaggtgaagtgtactgttaacctcttacaaggcttaccacgtcagaggtcacgcaagcaaggacca 48829559  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg 158  Q
    |||||||||||||| | |||||||||||||||||||||||  |||||| |||||||||    
T  48829560 aattgattgatttacagaaaattgtcaaggaccaaattgaatgatttttagaaaattg 48829617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 95 - 285
Target Start/End: Complemental strand, 51686251 - 51686053
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc--------caacggctctttctcctcttcctcatt 186  Q
    ||||||||||||| |||||  | ||||||| |||||| ||||||||| |||||||||||||||||        ||||  | |||||||||||| |||||     
T  51686251 ggaccaaattgatcgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgcaaaattcccaactaccctttctcctctttctcatg 51686152  T
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| |  ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51686151 aacgacattttcttccccaaatatataaatttctaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatg 51686053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2661893 - 2661732
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| | ||||||||||| |||||| ||||||| ||||||    
T  2661893 aaatcagtccctccattaagttggtctgttaacagaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcatatgccatgcaagcagggacca 2661794  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || | ||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  2661793 aactaattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 2661732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38193495 - 38193334
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  38193495 aaatcagtccatccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 38193396  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  38193395 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 38193334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 95 - 285
Target Start/End: Complemental strand, 611079 - 610890
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||  | |||||||||||||||||||||||| ||||||||||||||||| ||   |||   |   |||| ||||||||||||||    
T  611079 ggactaaattgatggattttcagaaaattgtcaaggaccaaattgattgattttcagaaaattgcaaaattctcaa-cgattctttctcattaacggctc 610981  T
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  610980 tttcttccccaaatatataattttggaaccttaatgttataatttgtcaccaagagttcacaatccccaaaatttctttcatgaattgatg 610890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44795875 - 44795714
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||| ||| ||    
T  44795875 aaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggatca 44795776  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  ||||||||||||||||| |||| || |||||| ||||    
T  44795775 aactgattgatttacacaaaatttccaaggaccaaattgatgaatttacacaaaatttccaa 44795714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46308911 - 46309072
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  46308911 aaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 46309010  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  46309011 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 46309072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 46310417 - 46310260
Alignment:
Q  5 cagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaatt 104  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| |||||||| |    
T  46310417 cagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaact 46310318  T
Q  105 gattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  46310317 gattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 46310260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 53187846 - 53188007
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||   |||||    
T  53187846 aaatcagtccctccgttaagttgatctggtaacggaggtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagacca 53187945  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  53187946 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 53188007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 41979148 - 41979025
Alignment:
Q  164 ggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccc 263  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||||     
T  41979148 ggctctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcccca 41979049  T
Q  264 aaatttcttccatgaattgatgtc 287  Q
    ||||||||| ||||||||||||||    
T  41979048 aaatttctttcatgaattgatgtc 41979025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 7883618 - 7883744
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  7883618 aacgactctttctcctcttcttcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 7883717  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  7883718 ccaaaatttcttccatgaattgatgtc 7883744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 35904118 - 35904240
Alignment:
Q  165 gctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccca 264  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||||||| |    
T  35904118 gctctttctcctcttcttcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatccccaa 35904217  T
Q  265 aatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||    
T  35904218 aatttcttccatgaattgatgtc 35904240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 46309131 - 46309256
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||  | || |||||||||||||||    
T  46309131 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttatacttccttacatagagttcaaaatcc 46309230  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  46309231 ccaaaatttcttccatgaattgatgt 46309256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 46609473 - 46609598
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  46609473 aacgactctttctccacttcctcattaaaggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 46609572  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  46609573 ccaaaatttcttccatgaattgatgt 46609598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 46611288 - 46611132
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||| ||||||| ||||||    
T  46611288 aaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaaggacca 46611189  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  46611188 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 46611132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 168 - 287
Target Start/End: Original strand, 53188073 - 53188192
Alignment:
Q  168 ctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaat 267  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||||||| ||||    
T  53188073 ctttctcctcttcctcattacgggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatccccaaaat 53188172  T
Q  268 ttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||||    
T  53188173 ttcttccatgaattgatgtc 53188192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 2661673 - 2661547
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||| ||||||||||||||||| |||| |||| | ||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  2661673 aacggttctttctcctcttcctcgttaagggctatgtcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 2661574  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  2661573 ccaaaatttcttccatgaattgatgtc 2661547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28626515 - 28626676
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||||| ||||||    
T  28626515 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggacca 28626614  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||| |||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  28626615 aattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaa 28626676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 38192207 - 38192332
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||    
T  38192207 aacgactctttctccacttcctcattaaaggttatttcttccccaaatatataaatttgaaaccctaatgttataattccttacatagagttcaaaatcc 38192306  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    |  |||||||||||||||||||||||    
T  38192307 caaaaatttcttccatgaattgatgt 38192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 38193275 - 38193150
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || || ||||||||||||    
T  38193275 aacgactctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacataaagttcaaaatcc 38193176  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  38193175 ccaaaatttcttccatgaattgatgt 38193150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 46310201 - 46310076
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  46310201 aacgactctttctccactttctcattaaaggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 46310102  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  46310101 ccaaaatttcttccatgaattgatgt 46310076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 23291867 - 23291979
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    ||||||||||||||| |||||||||||||||||   ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  23291867 tttctcctcttcctcgttaacggctctttcttctataaatatataaatttggaaccctaatgttataattcgtcatctagagttcaaaatctcccaaatt 23291966  T
Q  269 tcttccatgaatt 281  Q
    |||||||||||||    
T  23291967 tcttccatgaatt 23291979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46609253 - 46609414
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| | | |||||||||| |||||| ||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  46609253 aaatcagtccctacgttaagttggtttgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggacca 46609352  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  46609353 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 46609414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 53094038 - 53093913
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||| ||||| | |||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  53094038 aacggctttttcttcacttcctcattaagggctatttcttccccaaaaatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 53093939  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  53093938 ccaaaatttcttccatgaattgatgt 53093913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 53094258 - 53094097
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| ||||||||||  |||||    
T  53094258 aaatgagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagtgacca 53094159  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||| | | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  53094158 aactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 53094097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 165 - 287
Target Start/End: Complemental strand, 44795651 - 44795531
Alignment:
Q  165 gctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccca 264  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | ||  | |||||||||||||| |    
T  44795651 gctctttcttctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttac--aaagttcaaaatccccaa 44795554  T
Q  265 aatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||    
T  44795553 aatttcttccatgaattgatgtc 44795531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 54899873 - 54899747
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||| |||||   || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  54899873 aacgactctttctcctcttccttattaagcactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 54899774  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||| ||||||||||||||    
T  54899773 ccaaaatttctttcatgaattgatgtc 54899747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 53092947 - 53093072
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||| ||  ||||||||||||||||| || |||||||||||||||  | || |||||||||||||||    
T  53092947 aacggctctttctccacttcctcattaagggctatttattttccaaatatataaatttggaatcctaatgttataattccttacatagagttcaaaatcc 53093046  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  53093047 ccaaaatttcttccatgaattgatgt 53093072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 46611068 - 46610967
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  46611068 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 46610969  T
Q  261 cc 262  Q
    ||    
T  46610968 cc 46610967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 3150484 - 3150687
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||  | | |||||||||    
T  3150484 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacgactctttcccttctttgtgagtaacggctc 3150583  T
Q  195 tttct-----------tccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattga 283  Q
    |||||           ||||||||||||||||||||  |||||||||||||||||  | || ||||||||||||||||| |||    || ||||||||||    
T  3150584 tttctcctcttcctcatccccaaatatataaatttgggaccctaatgttataattccttacatagagttcaaaatccccaaaaaaaattacatgaattga 3150683  T
Q  284 tgtc 287  Q
    ||||    
T  3150684 tgtc 3150687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 53092856 - 53092959
Alignment:
Q  96 gaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctct 195  Q
    |||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | ||||||||||    
T  53092856 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctct 53092955  T
Q  196 ttct 199  Q
    ||||    
T  53092956 ttct 53092959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 54412320 - 54412253
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaa 228  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||    
T  54412320 aacggctctttctcctcttcctcattaacgaccctttcttccccaaatatataaatttggaaccctaa 54412253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 24846340 - 24846249
Alignment:
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||||||||||||||||||  |||||| |||||||| || |||||||||||||||||||||||||||| | | |||||||| |||||||||||    
T  24846340 ctctttcttccccaaatata--aatttggaaccctaaggtgataatttgtcacctagagttcaaaatcctcaagatttcttctatgaattgatg 24846249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 2378800 - 2378728
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  2378800 caaggatcaaattgatggattttcagaaaattgtcaacggctctttctcctctttctc-ttaacggctctttct 2378728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 2661765 - 2661688
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2661765 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 2661688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 28626735 - 28626832
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttcccc-aaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaa 257  Q
    ||||||||||||||| |||||||||| | |||| |||||||||| ||||||||||||||| ||||||||||||||||||  | || ||||||||||||    
T  28626735 aacggctctttctccacttcctcatttaaggctatttcttcccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaa 28626832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 53187974 - 53188051
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  53187974 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 53188051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 38193367 - 38193290
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38193367 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 38193290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 46310293 - 46310216
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46310293 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 46310216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 46609381 - 46609458
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46609381 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 46609458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 46611160 - 46611083
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  46611160 ggacgaaattgatggatttacacaaaattttcaaggaccaaattgatggatttttagaaaattggcaacggctctttc 46611083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 46309039 - 46309143
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  | | |||||||||    
T  46309039 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttttagaaaattgacaacggctctttcccttctttgtgagtaacggctc 46309138  T
Q  195 tttct 199  Q
    |||||    
T  46309139 tttct 46309143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38191999 - 38192073
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacg 75  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||| |||| | ||||||||    
T  38191999 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacg 38192073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 44795747 - 44795641
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||||||||||||  ||||| | ||||||  ||||||||||||||||||||||||||||||||| || |||||||||| | ||||  | | |||| ||||    
T  44795747 ggaccaaattgatgaatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcagcggctctttcccttctttgtgagtaacagctc 44795648  T
Q  195 tttcttc 201  Q
    |||||||    
T  44795647 tttcttc 44795641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 53094130 - 53094024
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||  | | ||||||||     
T  53094130 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacgactctttcccttctttgtgagtaacggctt 53094031  T
Q  195 tttcttc 201  Q
    |||||||    
T  53094030 tttcttc 53094024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 38192115 - 38192192
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| ||||| || |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38192115 ggacgaaattaatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 38192192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 28626643 - 28626719
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||    
T  28626643 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctcttt 28626719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 48829588 - 48829652
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc 159  Q
    |||||||||||| |||||| || |||||||||||||| ||||||||| |||||||||||||||||    
T  48829588 ggaccaaattgaatgatttttagaaaattgtcaaggaacaaattgattgattttcagaaaattgc 48829652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 13466865 - 13466811
Alignment:
Q  231 ttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  13466865 ttataatttgtcacctagagttcaaaatccctaaaatttcttccattaattgatg 13466811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 27897425 - 27897468
Alignment:
Q  121 attgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  27897425 attgccaaggaccaaattgatggattttcagaaaattgccaacg 27897468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 35861831 - 35861902
Alignment:
Q  191 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccc 262  Q
    |||||||||||||||||| |||||| |||||||||||||  || ||||||| | ||| ||| ||||||||||    
T  35861831 gctctttcttccccaaatctataaaattgaaaccctaattataaaatttgtaatctatagtccaaaatcccc 35861902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 54412346 - 54412308
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  54412346 aacggttctttctcctcttcctcattaacggctctttct 54412308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 22218568 - 22218633
Alignment:
Q  194 ctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatc 259  Q
    ||||| |||| |||| |||||| ||| ||||||||| |||||||||||||| || |||||||||||    
T  22218568 ctttcctcccaaaatctataaaattggaaccctaattttataatttgtcacttaaagttcaaaatc 22218633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 23875963 - 23876055
Alignment:
Q  192 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||| |||| || ||| ||| |||||| || |||| ||||||||  ||||||||||||| | | ||||||||||||| ||||||||    
T  23875963 ctctttcttcccaaaatctacaaaattggaacccttattttatcatttgtcat-tagagttcaaaattctcaaaatttcttccattaattgatg 23876055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 37865668 - 37865710
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||    
T  37865668 aacggctatttcttccccaaatatataaaattggaaccctaat 37865710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 22273876 - 22273573
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| ||||||    
T  22273876 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacacaagcagggacca 22273777  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctt-----------------tctcctcttcctc 183  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||||||||||||                 |||||||||||||    
T  22273776 aattgattgatttacagaaaattgccaaggaccaaattgatggatttttagaaaattgccaacggctctttctcattaacgactctttctcctcttcctc 22273677  T
Q  184 attaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattga 283  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22273676 attaacgactctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattga 22273577  T
Q  284 tgtc 287  Q
    ||||    
T  22273576 tgtc 22273573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 41040824 - 41041128
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    ||||| |||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||| ||||||    
T  41040824 aaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaacgttgacctcttacaagacttaccacgtcagatgtcacgcaagcagggacca 41040923  T
Q  101 aattgattgattt-ataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg-----------------gctctttctcctcttcct 182  Q
    ||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||                 |||||||||| |||||||    
T  41040924 aattgattgattttagagaaaattgtcaaggagcaaattgatggattttcagaaaattgccaacgactctttctcattaacggctctttctcttcttcct 41041023  T
Q  183 cattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattg 282  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41041024 cattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattg 41041123  T
Q  283 atgtc 287  Q
    |||||    
T  41041124 atgtc 41041128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 26238830 - 26239120
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||| |||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  26238830 aaatcagtccctccgttaagttagtctgttaacggaggtgatgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcatggacca 26238929  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg--------ccaacggctctttctcctcttcctcattaacggc 192  Q
    |||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||        |||||| |||||||||||||| ||||| |||| |    
T  26238930 aattgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgcaaaatttccaacgactctttctcctctttctcatgaacgac 26239029  T
Q  193 tctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattga 283  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26239030 tctttcttccctaaatatattaatttggaaccctaatgttataatttgtcacatagagttcaaaatccccaaaatttcttccatgaattga 26239120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 42943411 - 42943213
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  42943411 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 42943312  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  42943311 aattgattgatttacagaaaattgccaaggaccaaattgatggatttttagaaaattgtcaacggctctttctcctctttctcattaacggctctttct 42943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 5038047 - 5037851
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  5038047 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctcttacaaggcttaccacgtcagatgccacgcaa--atggacca 5037950  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | |||||||  ||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5037949 aattgattgatttacagaaaattgctaaggaccagcttgatggattttcagaaaattaccaacggctctttctcctctttctcattaacggctctttct 5037851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 38548816 - 38548618
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  38548816 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 38548717  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    || ||||||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||   | | ||||||||||||||    
T  38548716 aactgattgatttacacaaaattttcaaggaccaaattgatggattttcagaaaattggcaacggctatttctcttctctgtgagtaacggctctttct 38548618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 8608342 - 8608540
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||| ||||||    
T  8608342 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgcaacgcaagcagggacca 8608441  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||  | | ||||||||||||||    
T  8608442 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctatttctcttctttgtgagtaacggctctttct 8608540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 13283980 - 13283782
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||| |||||||||| ||||||    
T  13283980 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttatcacgtcagatgtcacgcaagcagggacca 13283881  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||| || |||||| ||||  | ||||||||||||||||    
T  13283880 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacgactatttctcttctttgtgattaacggctctttct 13283782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 5037863 - 5037737
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5037863 aacggctctttctcctcttcctcattaacggctctttcttccctaaatatataaatttgaaaccctaatgttataatttgtcacttagagttcaaaatcc 5037764  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
     ||||||||||||||||||||||||||    
T  5037763 tccaaatttcttccatgaattgatgtc 5037737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 13106908 - 13107086
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  13106908 aaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 13107007  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctt 179  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||| || |||||| ||||    
T  13107008 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacgactatttctcttctt 13107086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 33707310 - 33707481
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| || ||||||| ||||||    
T  33707310 aaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgtcaagcaagcagggacca 33707409  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    || ||||||||||| | |||||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33707410 aactgattgatttacacaaaattttcaaggaccaaattgatggattttcataaaattggcaacggctctttc 33707481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 13484800 - 13484926
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  13484800 aacgactctttctcctcttcctcattaacgactctttcttccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcc 13484899  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  13484900 cccaaatttcttccatgaattgatgtc 13484926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 41824156 - 41824356
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa--------cggctctttctcctcttcctcatt 186  Q
    ||||||||||||||||| |  | || |||| ||| || ||||||||| ||||||||||||||||| ||        ||||||||||||||||| |||||     
T  41824156 ggaccaaattgattgatattcagaatattgccaatgatcaaattgattgattttcagaaaattgcaaaattaccgacggctctttctcctctttctcatg 41824255  T
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgt 286  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  41824256 aacgactctttcttccccaaatatatatatttgaaaccctaatgttataatttgtcacgtagagttcaaaatccccaaaatttcttccatgaattgatgt 41824355  T
Q  287 c 287  Q
    |    
T  41824356 c 41824356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 42943225 - 42943099
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||     
T  42943225 aacggctctttctcctcttcctcattaacggctctttctttcccaaatatataaatttggaaccctaatgttataatttgtcacattgagttcaaaatct 42943126  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  42943125 cccaaatttcttccatgaattgatgtc 42943099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27692822 - 27692661
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||| ||||||    
T  27692822 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggacca 27692723  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  27692722 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 27692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 100 - 285
Target Start/End: Original strand, 3152194 - 3152378
Alignment:
Q  100 aaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||||  | |||||| ||||||||||||||||| ||||||||||||||||| ||   | |   |  ||||| ||||||||||||| |||||    
T  3152194 aaattgattgattttcagaaaattatcaaggaccaaattgattgattttcagaaaattgcaaaattcccaa-cgactctttctcattaacggctatttct 3152292  T
Q  200 tccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3152293 tcccaaaatatataaatttggaaccttgatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatg 3152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29237255 - 29237416
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  29237255 aaattagtccctccattaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaaggacca 29237354  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  29237355 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 29237416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 15308231 - 15308100
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15308231 ttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttat 15308132  T
Q  116 aaaaaattgtcaaggaccaaattgatggattt 147  Q
    | |||||| | |||||| |||| |||||||||    
T  15308131 acaaaattttgaaggacgaaatcgatggattt 15308100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 15488600 - 15488469
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15488600 ttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttat 15488501  T
Q  116 aaaaaattgtcaaggaccaaattgatggattt 147  Q
    | |||||| | |||||| |||| |||||||||    
T  15488500 acaaaattttgaaggacgaaatcgatggattt 15488469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 41823994 - 41824148
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||| |||||||||||||| ||||  |||||||||||||| || ||||||||||||| ||||||||| || ||||||    
T  41823994 aaatcagtccctccgttaagttggtctattaacggaggtgacttgtacagttaacctcttacatggcttaccacgtcagaagccacgcaaacagggacca 41824093  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaa 155  Q
    |||||||||||||| | ||||||| |||||| ||||||||| |||||||||||||    
T  41824094 aattgattgatttacataaaattgccaaggatcaaattgattgattttcagaaaa 41824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33761173 - 33761334
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||| | ||||||    
T  33761173 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggacca 33761272  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  33761273 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 33761334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 33761393 - 33761518
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  33761393 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattctttacatagagttcaaaatcc 33761492  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  33761493 ccaaaatttcttccatgaattgatgt 33761518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 33762482 - 33762357
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  33762482 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 33762383  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  33762382 ccaaaatttcttccatgaattgatgt 33762357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 35509318 - 35509479
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||||||| ||||||||  ||||||||| ||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  35509318 aaatcagtccatccgttaagttgacctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 35509417  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| ||||||||   |||||| |||||||||||||| || |||||| ||||    
T  35509418 aactgattgatttacaaaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 35509479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 35509538 - 35509663
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  35509538 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 35509637  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  35509638 ccaaaatttcttccatgaattgatgt 35509663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 38548630 - 38548504
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||||||  | || |||||||||||||||    
T  38548630 aacggctctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctactgttataattcattacatagagttcaaaatcc 38548531  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||| ||||||||||||||||||||    
T  38548530 ccaaaaattcttccatgaattgatgtc 38548504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 3152076 - 3152217
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    |||||||||| ||||||  || ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  3152076 ttaagttggtatgttaatagatgtgacatgtaatgttaacctcttacaaggtttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttac 3152175  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    | ||||||| ||| ||| |||||||| |||||||||||||||    
T  3152176 agaaaattgccaatgactaaattgattgattttcagaaaatt 3152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 29239172 - 29239011
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  29239172 aaattagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggacca 29239073  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  29239072 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 29239011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 27692602 - 27692478
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | ||  ||||||||||||||    
T  27692602 aacggctctttctcctcttccttattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttac--agagttcaaaatcc 27692505  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  27692504 ccaaaatttcttccatgaattgatgtc 27692478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 8608528 - 8608654
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||| |||||||  | || ||||||||||||||     
T  8608528 aacggctctttctcctcttcctcgttaagggctatttcttccccaaatatataaatttggaaccctaatgctataattccttacatagagttcaaaatct 8608627  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  8608628 ccaaaatttcttccatgaattgatgtc 8608654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 13107094 - 13107220
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || || |||||||||| |    
T  13107094 aacgactctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacataaagttcaaaattc 13107193  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  13107194 ccaaaatttcttccatgaattgatgtc 13107220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 13283794 - 13283668
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||| || |||||||||||||||  | || |||||||||||||||    
T  13283794 aacggctctttctcctcttcctcattaaggactatttattccccaaatatataaatttggaatcctaatgttataattccttacatagagttcaaaatcc 13283695  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  13283694 ccaaaatttcttccatgaattgatgtc 13283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 33707504 - 33707622
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||  | || ||||||||||||||||| |||||    
T  33707504 tttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccataatgttataattccttacatagagttcaaaatccccaaaatt 33707603  T
Q  269 tcttccatgaattgatgtc 287  Q
    |||||||||||||||||||    
T  33707604 tcttccatgaattgatgtc 33707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35510804 - 35510643
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| | |||||||||||| |||| | ||| ||||||||||| |||||||||| ||||||    
T  35510804 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtatcacgttaacctctgacaaagcttaacacgtcagatgtcacgcaagcagggacca 35510705  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  35510704 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 35510643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 29694107 - 29694003
Alignment:
Q  181 ctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaat 280  Q
    ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  29694107 ctcataaacggttctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccgcaagatttcttccatgaat 29694008  T
Q  281 tgatg 285  Q
    |||||    
T  29694007 tgatg 29694003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 601689 - 601528
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||| | |||||||||||| |||| | ||||||||||| || ||||||||||| ||||||    
T  601689 aaattagtccctccgttaagttggtctgttaacggaggtgacgtttcacgttaacctctgacaaagcttaccacgtcaaataccacgcaagcagggacca 601590  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  601589 aactgattgatttacagaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 601528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 29238952 - 29238827
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| || | ||||||| ||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  29238952 aacggctctttctccacttcctcattaagggttatttcttctccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 29238853  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||| ||||    
T  29238852 ccaaaatttcttccatgaattcatgt 29238827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 35510584 - 35510459
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | |  ||||||||||||| |    
T  35510584 aacgactctttctccacttcctcattaaaggctatttcttccccaaatatataaatttggaaccctaatgttataattctttagatagagttcaaaattc 35510485  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  35510484 ccaaaatttcttccatgaattgatgt 35510459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13484649 - 13484775
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  13484649 aaatcagtccctccattaagttggtctattaacgaaggtgacgtg-aacgttaaccttttacaaggcttaccacgtcagatgccacacaagcagggacca 13484747  T
Q  101 aattgattgatttataaaaaattgtcaa 128  Q
    ||||||| |||||  | |||||||||||    
T  13484748 aattgatggattttcagaaaattgtcaa 13484775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 15308026 - 15307913
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  15308026 aacggctctttctccacttcctcatttagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 15307927  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  15307926 ccaaaatttcttcc 15307913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 15488395 - 15488282
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  15488395 aacggctctttctccacttcctcatttagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 15488296  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  15488295 ccaaaatttcttcc 15488282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 285
Target Start/End: Original strand, 17807134 - 17807406
Alignment:
Q  12 tccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgat 111  Q
    ||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||| |||| | |||||||| |||| |||||||||| || ||| | ||     
T  17807134 tccattaagttggcctgttaacggaggtgacatgtactgttaacctcttacaaggcttacgatgtcagatgtcacgtaagcatggactaatttggtcgaa 17807233  T
Q  112 ttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttcttccccaaatata 211  Q
           |||||  ||| |||||||||||| ||| | || |||||||| ||     |  | || |||| ||  | |||| ||||||||||| ||||||||    
T  17807234 aatgttgaaattaccaaagaccaaattgattgatatacaaaaaattgcaaattctccaatgtc-tctttcttctcaacgtctctttcttccacaaatata 17807332  T
Q  212 taaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  17807333 taaatttggaaccctaattttataatttgtcacctagagttcaaaatccccaaaaattcttccattaattgatg 17807406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 43262122 - 43261964
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| ||||||||||||||||||||  ||||| | || |||||||||||||||| | |||||||||| |||| |||||||||| ||||||    
T  43262122 aaatcagtctctccgttaagttggtctgttaacgg--gtgacatctaccgttaacctcttacaaagcttaccacgtctgatgtcacgcaagcagggacca 43262025  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgcca 161  Q
    |||||||||||||  | |||||| |||| |||||||||||| |||||| | ||||||||||    
T  43262024 aattgattgattttcagaaaattttcaaagaccaaattgattgattttaaaaaaattgcca 43261964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 27404329 - 27404475
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||| |  |||||||||||||| |||||||||| |||||||| |||||||||||     
T  27404329 ttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgtcacgcaagcagggaccaaactgattgatttac 27404428  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    | ||||||   || ||| ||||||||| |||| || |||||| ||||    
T  27404429 acaaaatttcgaatgactaaattgatgaatttacacaaaatttccaa 27404475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 27404534 - 27404647
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||||| ||||||||||||  | || |||||||||||||||    
T  27404534 aacggctctttctccacttcctcatttagggctatttcttccccaaatatataaatttggaaccccaatgttataattccttacatagagttcaaaatcc 27404633  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  27404634 ccaaaatttcttcc 27404647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33762698 - 33762541
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||    || | ||||||||||||||| |||||||||| ||||||    
T  33762698 aaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctc----aaagcttaccacgtcagatgtcacgcaagcagggacca 33762603  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||| | | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  33762602 aactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 33762541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 29237475 - 29237576
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || || ||||||||||||    
T  29237475 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattctttacataaagttcaaaatcc 29237574  T
Q  261 cc 262  Q
    ||    
T  29237575 cc 29237576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 601469 - 601368
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||| |||||||||||| |||| || |||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  601469 aacgactctttctccacttcctcattaagggctattacttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 601370  T
Q  261 cc 262  Q
    ||    
T  601369 cc 601368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 11719742 - 11719840
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||||||||||| |||||| ||| ||||| ||| ||| ||||| ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  11719742 aacggctctttcttccccaaatctataaaattggaaccccaattttacaatttatcacctagagtccaaaatccccaaaatttcttccattaattgatg 11719840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 15562711 - 15562801
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||||||||||| || ||||||||| ||||| ||| || ||||||||||||||||||| ||||||||||||| ||||||||    
T  15562711 tttcttccccaaatatataaatatggaaccctaattttatagtttatctcctagagttcaaaatccccaaaatttcttccattaattgatg 15562801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 27692694 - 27692590
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    ||||||||||||| |||||| | ||||||  |||||||||||||||| |||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  27692694 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatagattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 27692595  T
Q  195 tttct 199  Q
    |||||    
T  27692594 tttct 27692590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 29239044 - 29238940
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||  | | |||||||||    
T  29239044 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacagctctttctcttctttgtgagtaacggctc 29238945  T
Q  195 tttct 199  Q
    |||||    
T  29238944 tttct 29238940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 33761301 - 33761405
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  33761301 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 33761400  T
Q  195 tttct 199  Q
    |||||    
T  33761401 tttct 33761405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 33762574 - 33762470
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  33762574 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 33762475  T
Q  195 tttct 199  Q
    |||||    
T  33762474 tttct 33762470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 35509446 - 35509550
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  35509446 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 35509545  T
Q  195 tttct 199  Q
    |||||    
T  35509546 tttct 35509550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 35510676 - 35510599
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35510676 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 35510599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 13484742 - 13484812
Alignment:
Q  129 ggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||||| || ||||||| ||||||||    
T  13484742 ggaccaaattgatggattttcagaaaattgtcaactgctctttatcctctttcttattaacgactctttct 13484812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 601561 - 601484
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  601561 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaaaggctctttc 601484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 29694287 - 29694210
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagca 93  Q
    ||||||| | |||||||||||||||| |||||   |||||| ||||||||||||||||||||| ||||||||||||||    
T  29694287 ttaagttagcctgttaacggaggtgatgtgtactattaaccgcttacaaggtttaccacgtcatatgccacgcaagca 29694210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 15308118 - 15308014
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||| ||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| | ||||  | | |||||||||    
T  15308118 ggacgaaatcgatggatttaaacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctctttcccttctttgtgagtaacggctc 15308019  T
Q  195 tttct 199  Q
    |||||    
T  15308018 tttct 15308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 15488487 - 15488383
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||| ||| |||||| | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| | ||||  | | |||||||||    
T  15488487 ggacgaaatcgatggatttaaacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctctttcccttctttgtgagtaacggctc 15488388  T
Q  195 tttct 199  Q
    |||||    
T  15488387 tttct 15488383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 29237383 - 29237487
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  |||||  |||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  29237383 ggacgaaattgatggatttacacaaaatttccaagggtcaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 29237482  T
Q  195 tttct 199  Q
    |||||    
T  29237483 tttct 29237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 27404447 - 27404546
Alignment:
Q  100 aaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||  ||||| | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| | ||||  | | ||||||||||||||    
T  27404447 aaattgatgaatttacacaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctctttcccttctttgtgagtaacggctctttct 27404546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 40338178 - 40338229
Alignment:
Q  236 atttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  40338178 atttgtcacctagagatcaaaattccccaaatttcttccatgaattgatgtc 40338229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 15684048 - 15684138
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||| |||||| ||| ||||| ||| ||| ||| ||| | |||||||||||||| ||  ||||||||||||| ||||||||    
T  15684048 tttcttccccaaatctataaaattggaaccccaattttacaatctgtaatctagagttcaaaattccaaaaatttcttccattaattgatg 15684138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 11790634 - 11790536
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||| ||||||||| ||||| ||||||  || |||| | || ||| ||||||| | ||| ||| |||||||||| ||||||||||||| ||||||||    
T  11790634 aacggcactttcttcctcaaatctataaaaatggaaccttgattttacaatttgttatctatagtccaaaatccccaaaatttcttccattaattgatg 11790536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15562527 - 15562573
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgta 47  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  15562527 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgta 15562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 25705567 - 25705609
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  25705567 aacggctctttcttccccaaatatataaaattggaaccctaat 25705609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 33369046 - 33369088
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  33369046 aacggctctttcttccccaaatatataaaattggaaccctaat 33369088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 9186432 - 9186352
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    |||||||||||||||| |||| ||||||||||||| ||| ||| ||| | ||| | | |||||||||  ||||||||||||    
T  9186432 tttcttccccaaatatttaaaattgaaaccctaattttacaatctgtaatctacactccaaaatcccataaatttcttcca 9186352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 25370797 - 25370836
Alignment:
Q  190 ggctctttcttccccaaatatataaatttgaaaccctaat 229  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  25370797 ggctctttcttccccaaatatataaaattggaaccctaat 25370836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 25402615 - 25402576
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccct 226  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  25402615 aacgactctttcttccccaaatatataaaattgaaaccct 25402576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 25707124 - 25707085
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccct 226  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  25707124 aacgactctttcttccccaaatatataaaattgaaaccct 25707085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 11031698 - 11031778
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| || |||||| ||| ||| | | | ||| | | |||||||||| ||||||||||||    
T  11031698 tttcttccccaaatatataaaattggaagcctaattttacaatctataatctacactccaaaatccccaaaatttcttcca 11031778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 5e-99; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 46582114 - 46582400
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  46582114 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 46582213  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    || |||| |||||| | |||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| || | ||||||    
T  46582214 aaatgatagatttacacaaaattttcaagaaccaaattgatggattttcataaaattggcaacggctctttctccacttcctcattaagggttatttctt 46582313  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||| |||||||||||||||| |  | || ||||||||||||||||| ||||||||||||||||||| ||||    
T  46582314 ccccaaatatataaatttggaaccctaatgttataactccttacatagagttcaaaatccccaaaatttcttccatgaattgttgtc 46582400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 45045039 - 45045327
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||     
T  45045039 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttac 45045138  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgcc-----------------aacggctctttctcctcttcctcattaacggctctttc 198  Q
    | ||||||| |||| ||||||||||||||||||||||||||| ||                 |||||||||||| ||||||||||||||||  |||||||    
T  45045139 agaaaattgccaagaaccaaattgatggattttcagaaaattaccaacgactctttatcattaacggctctttcccctcttcctcattaacaactctttc 45045238  T
Q  199 ttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  45045239 ttccccaaatatataaatttggaaccctaatgttataatttatcacatagagttcaaaatcccccaaatttcttccatgaattgatgtc 45045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3011959 - 3012157
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||  |||||    
T  3011959 aaatcagtccatccgttaagttggtctattaacggagatgacgtgtaacgttaacctcttacaaggcttatcacgtcagataccacgcaagcagagacca 3012058  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3012059 aattgattgatttacagaaaattgctaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctttctcattaacggctctttct 3012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 51894671 - 51894869
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||| ||||||||||||| |||| ||||||    
T  51894671 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaaactcttacaagacttaccacatcagatgccacgccagcagggacca 51894770  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  51894771 aattgattgatttacagaaaattgtcaacgaccaaattgatggattttcagaaaattgccaacggctctttctcctctttctcattaacggttctttct 51894869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2871061 - 2870863
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  2871061 aaatcagtccctccgttaagttgctctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggacca 2870962  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||  | ||||||| ||||||||||||||||||||||||| |||||||||| || |||||||||||||| |||||||||||||||||||    
T  2870961 aattgattgatttgcagaaaattgccaaggaccaaattgatggattttcataaaattgccaccgactctttctcctctttctcattaacggctctttct 2870863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 31236923 - 31237121
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||  |||||    
T  31236923 aaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaaccgcttacaaggcttaccacgtcagataccacgcaagcagagacca 31237022  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||  || |||||||||||||||||||    
T  31237023 aattgattgatttacataaaattgtcaaggaccaaattaatggattttcagaaaattcccaacggctctttctcccgtttctcattaacggctctttct 31237121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 126 - 287
Target Start/End: Original strand, 50554435 - 50554596
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  50554435 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcatcttcctcattaacagctctttcttccccaaatatataaatttggaaccc 50554534  T
Q  226 taatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  50554535 taatgttataatttgttacctagacttcaaaatcccccaaatttcttacatgaattgatgtc 50554596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37088121 - 37087923
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||| | |||||||||| ||||||||||||||||  |||||| |||||||||||| |||| | ||||||    
T  37088121 aaatcagtccctccgttaagttggtttgttaacggtgatgacgtgtaaagttaacctcttacaagacttaccaagtcagatgccacacaagtagggacca 37088022  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | ||||||||||||| |||||||||| |||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  37088021 aattgattgatttagagaaaattgtcaagggccaaattgattgatttttagaaaattgtcaacgactctttctcctctttctcattaacggctctttct 37087923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 2870875 - 2870749
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  2870875 aacggctctttctcctcttcctcattaacggctctttctttcccaaatatatcaatttggaaccctaatgttataatttgtcacctagagttcaaaatcc 2870776  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  2870775 cccaaatttcttccatgaattgatgtc 2870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 33599322 - 33599500
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||| |||||||||||||| ||||||    
T  33599322 aaatcagtccctccattaagttggtctgttaacggaggtgacgtgtaactttaacctcttacaaaacttaccacgtcatatgccacgcaagcagggacca 33599421  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctt 179  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| ||| |||||| |||| ||||    
T  33599422 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaatggctctctctcttctt 33599500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 31237109 - 31237235
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  31237109 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataattttggaaccctaatgttataatttgttacctagagttcaaaatcc 31237208  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||| ||||||||||    
T  31237209 cccaaatttcttccattaattgatgtc 31237235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 34776675 - 34776851
Alignment:
Q  3 atcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaa 102  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||  ||||||||| ||||||||    
T  34776675 atcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaacacgtcagatgaaacgcaagcagggaccaaa 34776774  T
Q  103 ttgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctctt 179  Q
     ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  34776775 ctgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctatttctcttctt 34776851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4854514 - 4854712
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||| |||||||||||||| ||||||    
T  4854514 aaatcagtcactccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctctgacaaagcttaccacgtcatatgccacgcaagcagggacca 4854613  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    || ||||||||||| | ||||||  ||||||||||||||||| ||||||||||||||| ||||| || |||||| ||||  | | ||||||||||||||    
T  4854614 aactgattgatttacacaaaatttccaaggaccaaattgatgtattttcagaaaattggcaacgactatttctcttctttgtgagtaacggctctttct 4854712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 51894857 - 51894983
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||     
T  51894857 aacggttctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaactctaatgttatattttgtcacctagagttcaaaatct 51894956  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  51894957 cccaaatttcttccatgaattgatgtc 51894983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26223691 - 26223847
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  26223691 aaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 26223790  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || ||||||    
T  26223791 aactgattgatttaaacaaaatttccaaggaccaaattgatggatttacacaaaatt 26223847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 96 - 285
Target Start/End: Original strand, 52642121 - 52642318
Alignment:
Q  96 gaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc--------caacggctctttctcctcttcctcatta 187  Q
    ||||||||||||||||||  | ||||||| |||||| || |||||| |||||||||||||||||        ||||  | |||||||||||| ||||| |    
T  52642121 gaccaaattgattgattttcagaaaattgccaaggaacagattgattgattttcagaaaattgcaaaatttccaacaacactttctcctctttctcatga 52642220  T
Q  188 acggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  52642221 acgactctttcttccccaaatatataaatttgtaaccctaatgttataattagtcacatagagttcaaaatccccaaaatttcttccatgaattgatg 52642318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 50554267 - 50554430
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||| || ||||  | ||||||    
T  50554267 aaatcagtcccttcgttaagttggtctgttaacgggggtgacgtgtaacgttaacctcttacatggcttaccacgtcaaatgtcatgcaataagggacca 50554366  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  50554367 aattgattgatttacacaaaattgccaaggaccaaattgatggattttcagaaaattgtcaacg 50554430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6816941 - 6817112
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  6816941 aaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaagggttaccacgtcagatgccacgcaaacaaggacca 6817040  T
Q  101 aattgattgatttataaaaa--------attgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    ||||||| |||||  | |||         ||| |||||||||||||||||||||||||||||||||||||||    
T  6817041 aattgatagattttcagaaattaccaacgttgccaaggaccaaattgatggattttcagaaaattgccaacg 6817112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 37087935 - 37087810
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |    
T  37087935 aacggctctttctcatcttcctcattaacggatctttcttccccaaatatataaatttggaaccctatcgttataatttgtcacctagagttcaaaat-c 37087837  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  37087836 cccaaatttcttccatgaattgatgtc 37087810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 3012145 - 3012271
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||     
T  3012145 aacggctctttctcctcttccgtattaaccgctctttcttccccaaatatataaatttggaaccctaatgttctaatttgtcacctatagttcaaaatct 3012244  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
     ||||||||||||||||||||||||||    
T  3012245 accaaatttcttccatgaattgatgtc 3012271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 6817169 - 6817295
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |    
T  6817169 aacgactctttctcctcttcctcattaacgactctttcttccccaaatatataaatttagaaccctaatgttataatttgttacctagagttcaaaattc 6817268  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |  ||||||||||||||||||||||||    
T  6817269 ctaaaatttcttccatgaattgatgtc 6817295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 37345947 - 37345786
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  37345947 aaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 37345848  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||| ||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  37345847 aactgattgacttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 37345786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 15106157 - 15106026
Alignment:
Q  152 aaaattgccaacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagt 251  Q
    |||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||    
T  15106157 aaaatttccaacggctctttctcctct--ctcattaacggctatttcttccccaaatatataaatttggaatcctaatgttataattcgtcacctacagt 15106060  T
Q  252 tcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||||||||| ||||||||| ||||||||||||    
T  15106059 tcaaaatccccaaaatttcttacatgaattgatg 15106026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 34776859 - 34776985
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  34776859 aacgactctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 34776958  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  34776959 ccaaaatttcttccatgaattgatgtc 34776985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 25276846 - 25277007
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||| | ||||||    
T  25276846 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggacca 25276945  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  25276946 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 25277007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27089264 - 27089103
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||| | ||||    
T  27089264 aaatcagtccttccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgttagatgccacgcaagcaggaacca 27089165  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  ||| |||||||||||||||||| || |||||| ||||    
T  27089164 aactgattgatttacacaaaatttccaatgaccaaattgatggatttacacaaaatttccaa 27089103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 1444166 - 1444010
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  1444166 aaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 1444067  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| | |||||| |||||||||||||| || ||||||    
T  1444066 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt 1444010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 8168046 - 8168206
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||| | ||||||    
T  8168046 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagta-ggacca 8168144  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  8168145 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 8168206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 20944855 - 20944730
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||| |||||    
T  20944855 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcagaatcc 20944756  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  20944755 ccaaaatttcttccatgaattgatgt 20944730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 33599508 - 33599634
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||| ||||||||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||| ||||||||  | || |||||||||||||||    
T  33599508 aacggatctttctcctcttcctcattaacagctatttcttccacaaatatataaatttggaaccctaattttataattccttacatagagttcaaaatcc 33599607  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  33599608 ccaaaatttcttccatgaattgatgtc 33599634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 1443947 - 1443822
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  1443947 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 1443848  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  1443847 ccaaaatttcttccataaattgatgt 1443822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 8168265 - 8168390
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||| |    
T  8168265 aacggctctttctccacttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattatttacatagagttcaaaattc 8168364  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||| ||||||||||||||||    
T  8168365 ccaaaattttttccatgaattgatgt 8168390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 8169333 - 8169208
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||  | || ||||||||||||||     
T  8169333 aacggctctttctccacttcctcattaagggctatttcttccccagatatataaatttggaaccctaatgttataattccttacatagagttcaaaatct 8169234  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  8169233 ccaaaatttcttccatgaattgatgt 8169208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8169553 - 8169392
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  8169553 aaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggacca 8169454  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||| | | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  8169453 aactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 8169392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 9120362 - 9120487
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  9120362 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 9120461  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  9120462 ccaaaatttcttccataaattgatgt 9120487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 47011563 - 47011716
Alignment:
Q  4 tcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaat 103  Q
    ||||||| ||| |||| |||| ||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||||     
T  47011563 tcagtccctccgttaatttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaac 47011662  T
Q  104 tgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    ||||||||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  47011663 tgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 47011716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 47011779 - 47011904
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  47011779 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 47011878  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  47011879 ccaaaatttcttccataaattgatgt 47011904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52641992 - 52642153
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| | |||||||||||||| |||| ||||||| ||||||||   ||||||||||||||||||| |||||| ||||||    
T  52641992 aaatcagtccctccgttaagttggtatattaacggaggtgacatgtaccgttaacttcttacaaaacttaccacgtcagatgccacacaagcagggacca 52642091  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||  | ||||||   || |||||||||||| ||||||||||||||||||||    
T  52642092 aattgattgattttcagaaaatttctaatgaccaaattgattgattttcagaaaattgccaa 52642153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9120143 - 9120299
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||| |||||||| |||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  9120143 aaattagtccctccgttaatttggtccgttaacgggggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggacca 9120242  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| | |||||| |||||||||||||| || ||||||    
T  9120243 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt 9120299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 26223911 - 26224034
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |||||||||||||||| |  | || |||||||||||||||    
T  26223911 aacgtctctttctcctcttcctcattaagggctatttctttcccaaatatataaatttggaaccctaatgttataactccttacatagagttcaaaatcc 26224010  T
Q  261 cccaaatttcttccatgaattgat 284  Q
    |  |||||||||||||||||||||    
T  26224011 ctaaaatttcttccatgaattgat 26224034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 27089044 - 27088918
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| |||||||||||||||||| |||| |  | |||||| |||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  27089044 aacgtctctttctcctcttcctctttaaggtttatttctttcccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 27088945  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || |||    |||||||||||||||||    
T  27088944 ccaaaaaaaattccatgaattgatgtc 27088918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 25277008 - 25277085
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  25277008 ggaccaaattgatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 25277085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 37345819 - 37345742
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  37345819 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 37345742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 8168173 - 8168277
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  8168173 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 8168272  T
Q  195 tttct 199  Q
    |||||    
T  8168273 tttct 8168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 8169425 - 8169321
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  8169425 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgagtaacggctc 8169326  T
Q  195 tttct 199  Q
    |||||    
T  8169325 tttct 8169321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 27089135 - 27089032
Alignment:
Q  96 gaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctct 195  Q
    |||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||| |||||||| | ||||  | ||||||| ||||    
T  27089135 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaactgctctttcccttctttttgattaacgtctct 27089036  T
Q  196 ttct 199  Q
    ||||    
T  27089035 ttct 27089032  T

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Target: chr1; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 26223819 - 26223896
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | |||||| |||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  26223819 ggaccaaattgatggatttacacaaaattttcaacgaccaaattgatggattttcagaaaattggcaacagctctttc 26223896  T

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Target: chr1; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 18058115 - 18058214
Alignment:
Q  186 taacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||| ||||||||||||||||| |||||| ||| |||| |||| ||| ||||||||| |||||||||||||||| | ||| |||||| || ||||||||    
T  18058115 taacgactctttcttccccaaatttataaaattggaaccttaattttacaatttgtcatctagagttcaaaatcctcaaaacttcttcaattaattgatg 18058214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 20945008 - 20944914
Alignment:
Q  68 ttaccacgtcagatgccacgcaagcatggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  20945008 ttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaa 20944914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23577740 - 23577817
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtca 78  Q
    |||||||||| ||| |||| |||| ||||||||||||||||||||| |||||||||||| |||| | |||||||||||    
T  23577740 aaatcagtccgtccgttaaattggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtca 23577817  T

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Target: chr1; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 1444038 - 1443963
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1444038 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 1443963  T

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Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 9120271 - 9120346
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  9120271 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 9120346  T

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Target: chr1; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 23577873 - 23577977
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| ||||| || |||||| | |||||| |||||||||||||||||||||||||||||||||| ||||| || |||| | ||||  ||| ||||||||     
T  23577873 ggacgaaatttatggatttacacaaaattttcaaggaccaaattgatggattttcagaaaattggcaacgcctatttcccttctttgtcagtaacggcta 23577972  T
Q  195 tttct 199  Q
    |||||    
T  23577973 tttct 23577977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 47011688 - 47011791
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  |||||| |||||||||||||||||||||||||| |||||||||||| || ||||  | | |||||||||    
T  47011688 ggacgaaattgatggatttacacaaaattc-caaggatcaaattgatggattttcagaaaattggcaacggctctttttcttctttgtgagtaacggctc 47011786  T
Q  195 tttct 199  Q
    |||||    
T  47011787 tttct 47011791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 4854700 - 4854813
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| |||| |||||||||||             | |||||| |||||||||||  | || |||||||||||||||    
T  4854700 aacggctctttctcctcttcctcattaagggctatttcttcccca-------------ggaaccctgatgttataattccttacatagagttcaaaatcc 4854786  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||| ||||||||||||||    
T  4854787 ccaaaatttctttcatgaattgatgtc 4854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 6817117 - 6817165
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctc 174  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  6817117 caaggaccaaattgatgaattttcataaaattgccaacggctctttctc 6817165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 20944947 - 20944843
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  |||| |||||||||||||||||||||||||||  |||| |||||||| | ||||  | | |||||||||    
T  20944947 ggacgaaattgatggatttacacaaaatttccaagaaccaaattgatggattttcagaaaatttgcaacagctctttcccttctttgtgagtaacggctc 20944848  T
Q  195 tttct 199  Q
    |||||    
T  20944847 tttct 20944843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 25277104 - 25277145
Alignment:
Q  165 gctctttctcctcttcctcattaacggctctttcttccccaa 206  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  25277104 gctctttctcctcttcctcattaagggctatttcttccccaa 25277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 37345723 - 37345682
Alignment:
Q  165 gctctttctcctcttcctcattaacggctctttcttccccaa 206  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  37345723 gctctttctcctcttcctcattaagggctatttcttccccaa 37345682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 5784674 - 5784586
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  5784674 aacggctatttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 5784586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 25276974 - 25277041
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||| |||||||| |||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  25276974 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttacataaaatttccaa 25277041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 3369746 - 3369820
Alignment:
Q  211 ataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||| ||| ||||||||| |||||||||||| || |||||| |||||  || |||||||||| || ||||||||    
T  3369746 ataaaattggaaccctaattttataatttgtcgccaagagtttaaaatttccaaaatttcttctattaattgatg 3369820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 3369549 - 3369626
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagca 93  Q
    ||||||||| ||||||||||||||||| ||||  ||| |||||| |||||| ||  || |||||||| ||| ||||||    
T  3369549 ttaagttggcctgttaacggaggtgacatgtattgtttacctctcacaaggcttgtcatgtcagatgtcacacaagca 3369626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 9400020 - 9399727
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||     
T  9400020 aaatcagtctctccgttaagttggtctgttaacagaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgccacgcaagcagggacct 9399921  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggc--tctttctc-----ctcttcctcattaacggct 193  Q
    |||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||| | |     ||| |     ||||| ||| ||||||| |    
T  9399920 aattgattgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgccaaggaccaaaattcccaacgactctttctctttaacggat 9399821  T
Q  194 ctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9399820 ctttcttccccaattatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccctaaaatttcttccatgaattgatgtc 9399727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20525319 - 20525121
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  20525319 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgcaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggacca 20525220  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||| | || |||| ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  20525219 aattgattgatttacagaacattgccaatgaccaaattgatggattttcagaaaattgtcaatggctctttctcctctttctcattaacgactctttct 20525121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 21091198 - 21091443
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| ||||||||||||||| |    
T  21091198 aaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatgtcacgcaagcatggacta 21091297  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||| |||    ||   |  ||||| ||||| |||| |||||||||    
T  21091298 aattgattgatttatagaaaattgtcaaggaccaaattgattgattttcataaaattg-caaaatttccaacggctctttctcatgaacgactctttctt 21091396  T
Q  201 ccccaaatatataaatttgaaaccctaatgttataatttgtcaccta 247  Q
    ||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  21091397 ccctaaatatataaatttggaactctaatgttataatttgtcaccta 21091443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 7371422 - 7371548
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7371422 aacgactctttctcctcttcctcattaacgactctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcc 7371521  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  7371522 cccaaatttcttccatgaattgatgtc 7371548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 11356952 - 11356826
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
T  11356952 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatct 11356853  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  11356852 cccaaatttcttccatgaattgatgtc 11356826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 7051230 - 7051072
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  7051230 aaattagtccctccattaagttggtctgttaacggaggtgacgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 7051131  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgc 159  Q
    |||||||||||||| | ||||||| |||||| ||||||||| |||||||||||||||||    
T  7051130 aattgattgatttacagaaaattgccaaggaacaaattgattgattttcagaaaattgc 7051072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11357179 - 11357020
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||    
T  11357179 aaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagacca 11357082  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||    
T  11357081 aattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattgccaa 11357020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6902883 - 6902727
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||  |||||    
T  6902883 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaccgttaacctcttacaagacttaccacgtcagatgtcacgcaagcagagacca 6902784  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    |||||||||||||| | ||||||||||||||| |||||||| |||||||||||||||    
T  6902783 aattgattgatttacagaaaattgtcaaggactaaattgattgattttcagaaaatt 6902727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 21068729 - 21068886
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||  |||||||||| ||||||    
T  21068729 aaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagcaaggacca 21068828  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg 158  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  21068829 aattgattgatttatagaaaattgccaaggaccaaattgattgattttcagaaaattg 21068886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 20525133 - 20525008
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  20525133 aacgactctttctcctcttcctcattaacgactctttcttccccaaatatataa-tttgaaaccctgatgttataatttgtcacctagagttaaaaatcc 20525035  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  20525034 cccaaatttcttccatgaattgatgtc 20525008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 13610793 - 13610982
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| |    ||||    
T  13610793 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaaccccttacaaggcttaccacgtcagatgacacgcaaac----acca 13610888  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
         ||||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  | | ||||||||||||||    
T  13610889 -----attgatttacaaaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttctcttctttgtgagtaacggctctttct 13610982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 21045414 - 21045571
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||||||| ||||||| | ||| ||| ||||||||||||||  ||||| ||||||||||| ||||||||||||||  |||||||||| ||||||    
T  21045414 aaatcagtccatccgttaagttagcctggtaatggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagcagggacca 21045513  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg 158  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  21045514 aattgattgatttattaaaaattgtcaaggaccaaattgattgattttcagaaaattg 21045571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32518482 - 32518321
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  32518482 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 32518383  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  32518382 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 32518321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 10569904 - 10569743
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| | || |||||||||||||||||||||||||||  |||||||||||||  || |||||| ||||||||||||||||||| ||| ||    
T  10569904 aaatcagtccctccgtcaaattggtctgttaacggaggtgacgtgtactgttaacctcttacgtggcttaccatgtcagatgccacgcaagcagggatca 10569805  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  10569804 aattgattgatttacagaaaattgccaaagaccaaattgattgattttcagaaaattgccaa 10569743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 18645089 - 18644928
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||   ||||||||| ||||| |||||||||| ||||||    
T  18645089 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgtaacgttaacctctgacaaaacttaccacgttagatgtcacgcaagcagggacca 18644990  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || |||| |||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  18644989 aactgatcgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 18644928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 33267165 - 33267288
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||| |||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  33267165 aaatcagtccttccgttaaattggcctgttaacggaggtgacgtgtagtgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggacca 33267264  T
Q  101 aattgattgatttataaaaaattg 124  Q
    |||||||||||||| | |||||||    
T  33267265 aattgattgatttacacaaaattg 33267288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 33267321 - 33267428
Alignment:
Q  174 cctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttc 273  Q
    |||||| ||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33267321 cctctttctcatgaacggctttttcttccccaaatatacaaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttc 33267420  T
Q  274 catgaatt 281  Q
    ||||||||    
T  33267421 catgaatt 33267428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 13610970 - 13611096
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| ||    |||||||||||||||    
T  13610970 aacggctctttctcctcttcctcattaacggttatttcttccccaaatatataaatttggaaccctaatgttataattcgttttatagagttcaaaatcc 13611069  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||| |||||||||| |||||    
T  13611070 ccaaaatttcctccatgaatttatgtc 13611096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 18644869 - 18644745
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||||  | || |||||||||||||||    
T  18644869 aacgactctttctcctcttcctcattaagggctatttcttccccaaatatataa-tttggaaccctaatgttataattccttacatagagttcaaaatcc 18644771  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || |||||||||||||||||||||||    
T  18644770 ccaaaatttcttccatgaattgatgt 18644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 3480642 - 3480486
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| ||||||| |||| |||| | |||||||||||||||||||||||||| ||||||    
T  3480642 aaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaatctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 3480543  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  3480542 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 3480486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 32437231 - 32437387
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||| ||| ||| |||||||||| ||||||||||| ||||||||||||||||||||| |||| | |||||||||||||| ||||||||||| ||||||    
T  32437231 aaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcagataccacgcaagcagggacca 32437330  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | || |||  | |||||||||||||||||||| || ||||||    
T  32437331 aactgattgatttacacaacatttccgaggaccaaattgatggatttacacaaaatt 32437387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 32437459 - 32437577
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||||||| |||||    
T  32437459 tttctcctcttcctcattaagggttatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatccccaaaatt 32437558  T
Q  269 tcttccatgaattgatgtc 287  Q
    |||| ||||||||||||||    
T  32437559 tctttcatgaattgatgtc 32437577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 32454571 - 32454696
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| |  | |||||| |||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  32454571 aacggctctttctccacttcctcattaaggtttatttctttcccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 32454670  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  32454671 ccaaaatttcttccataaattgatgt 32454696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 284
Target Start/End: Original strand, 33276925 - 33277193
Alignment:
Q  27 tgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttataaaaaattgtc 126  Q
    |||||||||||||||| ||||  ||||| |||||| |||  | ||||||||||||| ||||   ||   ||||||||||||||||||||| ||||||||     
T  33276925 tgttaacggaggtgacatgtactgttaatctcttataagactgaccacgtcagatgtcacgtttgc---gaccaaattgattgatttatagaaaattgta 33277021  T
Q  127 aaggaccaaattgatggattttcagaaaattgc--------caacggctctttctcc--------tcttcctcattaacggctctttcttccccaaatat 210  Q
    ||||| ||||||||| |||||||||||||||||        ||||   ||||| |||        |||| ||||| || | |||||||||| | ||||||    
T  33277022 aaggatcaaattgattgattttcagaaaattgcaaaatttccaacatatctttttccccaacgtctctttctcatgaaag-ctctttcttctc-aaatat 33277119  T
Q  211 ataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgat 284  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33277120 ataaatttggaaccctgattttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgat 33277193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7371279 - 7371391
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||  |||||||||||||| ||||||||||| ||||||    
T  7371279 aaatcagtccctcctttaagttggtctgttaaaggaggtgacgtgtaacattaacctcttataagacttaccacgtcagataccacgcaagcagggacca 7371378  T
Q  101 aattgattgattt 113  Q
    ||||||| |||||    
T  7371379 aattgatggattt 7371391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 32454352 - 32454508
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||||||  |||||    
T  32454352 aaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgccacgcaagcagagacca 32454451  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | ||||||   |||||| |||| ||| ||||| || ||||||    
T  32454452 aactgattgatttacacaaaatttcgaaggacgaaatcgatagatttacacaaaatt 32454508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 14337770 - 14338065
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||||||||||||| |||||||| |||||||| ||||   ||||||||||||||| || |||| |||||||| ||||||||||  ||| |    
T  14337770 aaatcagtccctccattaagttggcctgttaacagaggtgacatgtactattaacctcttacaagctt-accatgtcagatgtcacgcaagcagagacaa 14337868  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg--------ccaacggctctttctcc------tcttcctcatt 186  Q
    | |||  |||     |  ||||| ||||||||||||||||| ||||| ||||||||||        |||||  |||||| |||      |||| ||  |     
T  14337869 atttggctgaaaatgatgaaattatcaaggaccaaattgattgatttacagaaaattgaaaattccccaacatctctttttccccaacgtctttcttctc 14337968  T
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    ||||  |||||||| || ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  14337969 aacg--tctttctttccgaaatatataaatttggaaccctaattttataatttgtcacatagagttcaaaatccccaaaatttcttccattaattgatg 14338065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 11357013 - 11356940
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  11357013 caaggaccaaattgatggattttcagaaaattgccaacgactctttctcctctttatcattaacggctctttct 11356940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 32518354 - 32518277
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32518354 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttc 32518277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 32437359 - 32437436
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | |||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||    
T  32437359 ggaccaaattgatggatttacacaaaattttcacggaccaaattgatggattttcagaaaattggcaacagctctttc 32437436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 247
Target Start/End: Original strand, 21045542 - 21045693
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||||||||||||||||||  | |||||||||||| | ||||||||| |||||||| |||||||| ||    ||   |  ||||| ||||| |||| |||    
T  21045542 ggaccaaattgattgattttcagaaaattgtcaagaatcaaattgattgattttcataaaattgcaaaatt-tccaacgactctttctcatgaacgactc 21045640  T
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcaccta 247  Q
    ||||||||| ||||||||||||||| ||  ||||| |||||||||||||||||    
T  21045641 tttcttccctaaatatataaatttggaaatctaattttataatttgtcaccta 21045693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 248
Target Start/End: Original strand, 21068857 - 21069009
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||||||||||||||||||  | |||||||||||| | ||||||||| |||||||| |||||||  ||    ||   |  ||||| ||||| |||| |||    
T  21068857 ggaccaaattgattgattttcagaaaattgtcaagaatcaaattgattgattttcacaaaattgaaaaatt-tccaacgactctttctcatgaacgactc 21068955  T
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctag 248  Q
    ||||||||| ||||||||||||||| ||  ||||| ||||||||||||||||||    
T  21068956 tttcttccctaaatatataaatttggaaatctaattttataatttgtcacctag 21069009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 3480514 - 3480439
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  3480514 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 3480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 6902715 - 6902659
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtca 243  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6902715 aacgactctttcttccctaaatatataaatttggaaccctaatgttataatttgtca 6902659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 7371373 - 7371418
Alignment:
Q  129 ggaccaaattgatggattttcagaaaattgccaacggctctttctc 174  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7371373 ggaccaaattgatggattttccgaaaattgccaacggctctttctc 7371418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 18644961 - 18644884
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||| ||||||| ||||  |||||||    
T  18644961 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattggcaacaactctttc 18644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 10569775 - 10569713
Alignment:
Q  96 gaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattg 158  Q
    ||||||||||||||||||  | ||||||| |||||| ||||||||| ||||||||||||||||    
T  10569775 gaccaaattgattgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattg 10569713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 32454510 - 32454555
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  32454510 caaggaccaaattgatgaattttcagaaaattggcaacgactcttt 32454555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 32518258 - 32518217
Alignment:
Q  165 gctctttctcctcttcctcattaacggctctttcttccccaa 206  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  32518258 gctctttctcctcttcctcattaagggctatttcttccccaa 32518217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 4289702 - 4289790
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||| ||||||||||||||||||||| ||| || |||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  4289702 aacggctatttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctatactccaaaatctccaaattttcttcca 4289790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 17950853 - 17950933
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  17950853 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 17950933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 35174674 - 35174754
Alignment:
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | ||||||| || || |||||||||    
T  35174674 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttcca 35174754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 7e-86; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 34328812 - 34328504
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaag----gtttaccacgtcagatgccacgcaagcatgg 96  Q
    |||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||    | |||||||||||||||||||||||||| ||    
T  34328812 aaatcagtcgctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggctagcttaccacgtcagatgccacgcaagcaggg 34328713  T
Q  97 accaaattgattgatttataaaaaattgtcaaggacc-aaattgatggattttcagaaaattgccaac-----------------ggctctttctcctct 178  Q
    ||||||||||||||||||  | ||||| ||||||||| ||||||||||||||||||||||||||||||                 |||||||||||||||    
T  34328712 accaaattgattgattta-gagaaattttcaaggaccaaaattgatggattttcagaaaattgccaacgactctttctcattaatggctctttctcctct 34328614  T
Q  179 tcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccc-aaatttcttccatg 277  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  34328613 tcctcattaacgactctttcttccccaaatatataaatttggaaccctaatattataatttgtcgcctagagttcaaaatcccccaaaatttcttccatg 34328514  T
Q  278 aattgatgtc 287  Q
    ||||||||||    
T  34328513 aattgatgtc 34328504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 28813750 - 28813522
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||  |||||    
T  28813750 aaatcagtccctccgttaaattggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgtcacgcaagcagcgacca 28813651  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttctt 200  Q
    |||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  28813650 aattgattgatttacagaaaattgccaaggaccaaattgatgaattttcagaaaattgtcaacggctctttctcatctttctcattaacggctctttctt 28813551  T
Q  201 -ccccaaatatataaatttgaaaccctaa 228  Q
     ||||||||||||||||||| ||||||||    
T  28813550 cccccaaatatataaatttggaaccctaa 28813522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 32134355 - 32134538
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||||||||     
T  32134355 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttatcacgtcagatgccacgcaagcagggaccaaattgattgatttac 32134454  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    | ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  32134455 agaaaattgccaaggaccaaattgatgaattttcataaaattgccaacggctctttctcctctttctcattaacggctctttct 32134538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30464004 - 30464167
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||    
T  30464004 aaatcagtccctctgttaagttggtctgtttacggaggtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgtcacgcaagcagggacca 30464103  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  30464104 aattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacg 30464167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 28822075 - 28821886
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||    
T  28822075 aaatcagtccctccgttaagttggtctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgccaagcaagcagggacca 28821976  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacgg 191  Q
    |||||||||||||| | ||||||| |||||  |||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||||    
T  28821975 aattgattgatttacagaaaattgccaagg-tcaaattgatggattttcagaaaattgtcaacgactatttctcctctttctcattaacgg 28821886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12738721 - 12738560
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||    
T  12738721 aaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggacca 12738622  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  12738621 aattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgccaa 12738560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12801544 - 12801383
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||    
T  12801544 aaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggacca 12801445  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  12801444 aattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgccaa 12801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 7269431 - 7269233
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| | ||||||    
T  7269431 aaatcagtcagtccgttaagttgatctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggacca 7269332  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    || ||||||||||| | ||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||  | | ||||||||||||||    
T  7269331 aactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattgacaacggctatttctcttctttgtgagtaacggctctttct 7269233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 32134526 - 32134652
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  32134526 aacggctctttctcctcttcctcattaacggctctttcttctacaaatatataaatttggaaccctaatgttataatttgtcacctatagttcaaaatcc 32134625  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  32134626 cccaaatttcttccatgaattgatgtc 32134652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 30464239 - 30464359
Alignment:
Q  167 tctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaa 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30464239 tctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaa 30464338  T
Q  267 tttcttccatgaattgatgtc 287  Q
    |||||||||||| ||||||||    
T  30464339 tttcttccatgacttgatgtc 30464359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 28821882 - 28821759
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28821882 tttcacctattcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 28821783  T
Q  269 tcttccatgaattgatgtccatct 292  Q
    |||||||| |||||||||| ||||    
T  28821782 tcttccattaattgatgtcaatct 28821759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 12738501 - 12738375
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  12738501 aacggctctttctcctcttcctcattaacgactctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcc 12738402  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||| ||||||||||||||    
T  12738401 cccaaatttcttacatgaattgatgtc 12738375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 12801324 - 12801198
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  12801324 aacggctctttctcctcttcctcattaacgactctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcc 12801225  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||| ||||||||||||||    
T  12801224 cccaaatttcttacatgaattgatgtc 12801198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 42471667 - 42471850
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||||| |||| |||||||| ||||||     
T  42471667 ttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggactaaattgatggatttac 42471766  T
Q  116 aaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    | ||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| | ||||  | | ||||||||||||||    
T  42471767 acaaaatttccaaggaccaaattgatggattttcagaaaattcgcaacggctctttcccatctttgtgagtaacggctctttct 42471850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 8541104 - 8540978
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||     
T  8541104 aacggctctttctcctcttcctcattaacggttctttcttccccaaatatataaatttggaaccctaatattataattcgtcacctaaagttcaaaatct 8541005  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||||||||| |||||||    
T  8541004 cccaaatttcttccatgaaatgatgtc 8540978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 17577920 - 17577759
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  17577920 aaatcagtccctccgttaaattggtctgttaacggagctgacgtgtaacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggacca 17577821  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    || ||||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  17577820 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 17577759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 2181495 - 2181368
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaattt-gaaaccctaatgttataatttgtcacctagagttcaaaatc 259  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||||||| | |||||||||||||||||    
T  2181495 aacggctctttctcctctttctcattaacgactctttctaccccaaatatataaatttagaacccctaatgttataattttttacctagagttcaaaatc 2181396  T
Q  260 ccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||||||| ||||||||||||||    
T  2181395 ccccaaatttcttacatgaattgatgtc 2181368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 8541256 - 8541125
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  8541256 aaatcagtccctccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcatgcaagcagggacca 8541157  T
Q  101 aattgattgatttataaaaaattgtcaaggac 132  Q
    |||||||||||||| | ||||||| |||||||    
T  8541156 aattgattgatttacagaaaattgccaaggac 8541125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 18623740 - 18623859
Alignment:
Q  164 ggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccc 263  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||     
T  18623740 ggctctttctcctcg--ctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataattcgtcacctagagttcaaaatcccca 18623837  T
Q  264 aaatttcttccatgaattgatg 285  Q
    ||||||||| ||||||||||||    
T  18623838 aaatttcttacatgaattgatg 18623859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 24540086 - 24540212
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||||  | || |||||||||||||||    
T  24540086 aacggctctttttcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgctataattccttacatagagttcaaaatcc 24540185  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  24540186 ccaaaatttcttccatgaattgatgtc 24540212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21842977 - 21842821
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||  | | |||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  21842977 aaatcagtccctccgttaagttttttttttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 21842878  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| |||| |||||||||||||||||| || ||||||    
T  21842877 aactgattgatttacacaaaattttcaatgaccaaattgatggatttacacaaaatt 21842821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 2181587 - 2181483
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  2181587 ggaccaaattgattaatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgccaacgactctttctcctctttctcattaacggctc 2181488  T
Q  195 tttct 199  Q
    |||||    
T  2181487 tttct 2181483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 29620242 - 29620398
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||| ||||||||||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||| ||||||    
T  29620242 aaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggacca 29620341  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| | |||||| |||||||||||||| || ||||||    
T  29620342 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt 29620398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 40782196 - 40782040
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||| ||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  40782196 aaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 40782097  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | ||||||   |||||| |||||||||||||| || ||||||    
T  40782096 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt 40782040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 21842749 - 21842631
Alignment:
Q  169 tttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatt 268  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||||||| |||||    
T  21842749 tttctcctcttcctcaataagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatccccaaaatt 21842650  T
Q  269 tcttccatgaattgatgtc 287  Q
    ||||||| |||||||||||    
T  21842649 tcttccacgaattgatgtc 21842631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2852990 - 2853103
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||| | ||||    
T  2852990 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacttcagatgccacgcaagcaggaacca 2853089  T
Q  101 aattgattgattta 114  Q
    || |||||||||||    
T  2853090 aactgattgattta 2853103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 17576388 - 17576275
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  17576388 aacgactctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 17576289  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  17576288 ccaaaatttcttcc 17576275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 17577700 - 17577587
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  17577700 aacgactctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 17577601  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  17577600 ccaaaatttcttcc 17577587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 29620465 - 29620586
Alignment:
Q  165 gctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatccccca 264  Q
    ||||||||||| |||||||||||| | || |||||||| |||||||||||||||| ||||||||||||||||||  | || ||||||||||||||||| |    
T  29620465 gctctttctccacttcctcattaaggactatttcttcctcaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatccccaa 29620564  T
Q  265 aatttcttccatgaattgatgt 286  Q
    |||||||||||| |||||||||    
T  29620565 aatttcttccataaattgatgt 29620586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 40781977 - 40781852
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||| ||||| |    
T  40781977 aacggctctttctccacttcctcattaaggactatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagtttaaaattc 40781878  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  40781877 ccaaaatttcttccataaattgatgt 40781852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 41494145 - 41494248
Alignment:
Q  181 ctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaat 280  Q
    ||||| ||||||| ||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41494145 ctcatgaacggctttttctaccc-aaatatataaatttggaacccgaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaat 41494243  T
Q  281 tgatg 285  Q
    |||||    
T  41494244 tgatg 41494248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 7269245 - 7269148
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaat 258  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||    
T  7269245 aacggctctttctcctcttcctcattaagggctatttcttccccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaat 7269148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 24539933 - 24540027
Alignment:
Q  68 ttaccacgtcagatgccacgcaagcatggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| | |||||| ||||||||||||||||||||||| || |||||| ||||    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaaatttccaa 24540027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 19998234 - 19998145
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccat 276  Q
    |||| ||||||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||| ||||| | | |||||||||||||    
T  19998234 aacgtctctttcttccccaaatctataaaatggaaaccctaattttataatttgtcacctagagtttaaaattctcaaaatttcttccat 19998145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 24539994 - 24540096
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| |||| |||||||| | ||||  | | |||||||||    
T  24539994 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaactgctctttcccttctttgtgagtaacggctc 24540093  T
Q  195 ttt 197  Q
    |||    
T  24540094 ttt 24540096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 17577792 - 17577715
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  17577792 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattggcaacggctctttc 17577715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41493948 - 41494045
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggac 98  Q
    ||||| |||||||| ||||||||| |||||||||||| ||||||||| |||||||  ||||||||| | ||||| ||||||| ||| |||||||||||    
T  41493948 aaatccgtccatccgttaagttggcctgttaacggagatgacgtgtaccgttaactgcttacaaggctcaccacatcagatgtcacacaagcatggac 41494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 42471838 - 42471914
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatt 238  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| || |||||||||||||||    
T  42471838 aacggctctttctccacttcctcatttaaggctatttcttccccaaatatataaatttggaa-cctaatgttataatt 42471914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 21842848 - 21842772
Alignment:
Q  96 gaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttc 172  Q
    |||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  21842848 gaccaaattgatggatttacacaaaattttcaaggaccaaattgatggatttttagaaaattggcaacagctctttc 21842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 8541162 - 8541092
Alignment:
Q  129 ggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||| ||| |||||||||||||||||||    
T  8541162 ggaccaaattgattgatttacagaaaattgccaaggactctttctcccctttctcattaacggctctttct 8541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 27077261 - 27077163
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||| |||||||||||||||||  ||||  ||| ||||||||| ||||||||||||||  ||||||||||||| |  ||||||||||||| ||||||||    
T  27077261 aacgtctctttcttccccaaatccataacattggaaccctaattttataatttgtcactgagagttcaaaatctctaaaatttcttccattaattgatg 27077163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 29620370 - 29620445
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  29620370 ggacgaaattgatggatttacacaaaattc-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 29620445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 40782068 - 40781965
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||| |||||||| |||||| | ||||||  |||||| |||||||||||||||||||||||||| |||||||||||| || ||||  | | |||||||||    
T  40782068 ggacgaaattgatggatttacacaaaattc-caaggatcaaattgatggattttcagaaaattggcaacggctctttttcttctttgtgagtaacggctc 40781970  T
Q  195 tttct 199  Q
    |||||    
T  40781969 tttct 40781965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 30464172 - 30464234
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaa 188  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||  || ||||||||    
T  30464172 caaggaccaaattgatggattttcagaaaattcccaacgactctttctcccgtttctcattaa 30464234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27077452 - 27077355
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggac 98  Q
    ||||| |||| ||| |||||||||  |||||| ||||||||||||||  |||||||||| |||||| || ||| |||||||||||| ||| |||||||    
T  27077452 aaatcggtccctccgttaagttggcatgttaatggaggtgacgtgtactgttaacctctcacaaggcttgccatgtcagatgccacacaaacatggac 27077355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 17575626 - 17575567
Alignment:
Q  228 atgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||  | || ||||||||||||||||| ||||||||||||||||||||||||    
T  17575626 atgttataattccttacatagagttcaaaatccccaaaatttcttccatgaattgatgtc 17575567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 6116701 - 6116610
Alignment:
Q  190 ggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaatt 281  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||  ||| | | | ||| |||  ||||||||| ||||||||||||| ||||    
T  6116701 ggctctttcttccccaaatctataaaattgaaaccctaatttttcaatctctaatctacagtcaaaaatccccaaaatttcttccattaatt 6116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 12738553 - 12738515
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  12738553 caaggactaaattgatggattttcagaaaattgccaacg 12738515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 12801376 - 12801338
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacg 164  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  12801376 caaggactaaattgatggattttcagaaaattgccaacg 12801338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 1344617 - 1344528
Alignment:
Q  186 taacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||| ||| ||| | | | ||| | | ||||||| || ||||||||||||    
T  1344617 taacggctctttcttccctaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttcttcca 1344528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 42471921 - 42471985
Alignment:
Q  209 atataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcc 274  Q
    ||||||||||| |||| |||||||||||||  | || ||||||||||||||||| |||||||||||    
T  42471921 atataaatttggaacc-taatgttataattccttacatagagttcaaaatccccaaaatttcttcc 42471985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 275
Target Start/End: Original strand, 1343482 - 1343564
Alignment:
Q  193 tctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttcca 275  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||| | | | ||| | | ||||||| || ||||||||||||    
T  1343482 tctttcttccctaaatatataaaattgacaccctaattttataatctttaaactacactccaaaatctccaaaatttcttcca 1343564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 9697 - 9571
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9697 aacggctctttctcctcttcctcattaacgactctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 9598  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  9597 cccaaatttcttccatgaattgatgtc 9571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 9777 - 9711
Alignment:
Q  133 caaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  9777 caaattgatggattttcagaaaattaccaacggctctttctcctctttctcattaacggctctttct 9711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 9723 - 9685
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttct 199  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9723 aacggctctttctcctcttcctcattaacggctctttct 9685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 1313 - 1187
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
T  1313 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatct 1214  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    |||||||||||||||||||||||||||    
T  1213 cccaaatttcttccatgaattgatgtc 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 1540 - 1381
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||    
T  1540 aaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagacca 1443  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||    
T  1442 aattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattgccaa 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 1374 - 1301
Alignment:
Q  126 caaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctctttct 199  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  1374 caaggaccaaattgatggattttcagaaaattgccaacgactctttctcctctttatcattaacggctctttct 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 101; Significance: 4e-50; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 7217 - 7061
Alignment:
Q  6 agtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattg 105  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||| ||    
T  7217 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactg 7118  T
Q  106 attgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||||| | ||||||  |||||||||||||||||||||| || |||||| ||||    
T  7117 attgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaa 7061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 7002 - 6876
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    |||||||||||||||||||||||||||| | || |||||| |||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  7002 aacggctctttctcctcttcctcattaaggtctatttcttacccaaatatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 6903  T
Q  261 cccaaatttcttccatgaattgatgtc 287  Q
    || ||||||||||||||||||||||||    
T  6902 ccaaaatttcttccatgaattgatgtc 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 7094 - 6990
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  | | |||||||||    
T  7094 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattggcaacggctctttcccttctttgtgaataacggctc 6995  T
Q  195 tttct 199  Q
    |||||    
T  6994 tttct 6990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 106891 - 107081
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctctttctcctcttcctcattaacggctc 194  Q
    |||||||||||||||||||  | ||||||| |||||||||||||||| |||||||| |||||||  ||   | |   |  ||||| |||||||||| |||    
T  106891 ggaccaaattgattgattttcataaaattgccaaggaccaaattgattgattttcaaaaaattgtgaaattcccag-cggctctttctcattaacgactc 106989  T
Q  195 tttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtc 287  Q
    ||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  106990 tttcttcccaaattatataatttcgaa-ccctaatgttataatttgtcacctagagttcaaaatcctcaaaatttcttccatgaattgatgtc 107081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 162
Target Start/End: Original strand, 106801 - 106924
Alignment:
Q  39 tgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggaccaaattgattgatttataaaaaattgtcaaggaccaaatt 138  Q
    ||||||||| |||| ||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  106801 tgacgtgtaccgttgacctcttacaaggcttaccacgttagatgtcacgcaagcagggaccaaattgattgatttacgtaaaattgtcaaggaccaaatt 106900  T
Q  139 gatggattttcagaaaattgccaa 162  Q
    ||| |||||||| |||||||||||    
T  106901 gattgattttcataaaattgccaa 106924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1086 - 1247
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||| |||||||||||| |||| |  |||||||||| |||||||||||||| ||||||    
T  1086 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaaatgccacgcaagcagggacca 1185  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaa 162  Q
    ||||||| |||||| | ||||||   |||||| |||||||||||||| || |||||| ||||    
T  1186 aattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaa 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 1306 - 1419
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||| ||| ||||||||||  | || |||||||||||||||    
T  1306 aacggctctttctccacttcctcatttaaggctatttcttccccaaatatataaatttggaactctactgttataattccttacatagagttcaaaatcc 1405  T
Q  261 cccaaatttcttcc 274  Q
    || |||||||||||    
T  1406 ccaaaatttcttcc 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 1214 - 1290
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  |||||| |||||||||||||||||||||||||  ||||||||||||    
T  1214 ggactaaattgatggatttacacaaaatttccaaggaacaaattgatggattttcagaaaattcgcaacggctcttt 1290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 54024 - 53899
Alignment:
Q  161 aacggctctttctcctcttcctcattaacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcc 260  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||| ||||||||||| ||||||||||||||||||  | || |||||||||||||||    
T  54024 aacggctctttctccacttcctcattaaggactatttcttccccaaagatataaatttggaaccctaatgttataattccttacatagagttcaaaatcc 53925  T
Q  261 cccaaatttcttccatgaattgatgt 286  Q
    || ||||||||||||| |||||||||    
T  53924 ccaaaatttcttccataaattgatgt 53899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 54243 - 54087
Alignment:
Q  1 aaatcagtccatccattaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaagcatggacca 100  Q
    |||| ||||| ||| |||| |||||| ||||||||||||||||||| |||||||||| | |||| | ||||||||||||||| |||||||||| ||||||    
T  54243 aaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctttgacaaagcttaccacgtcagatgacacgcaagcagggacca 54144  T
Q  101 aattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaatt 157  Q
    || ||||||||||| | |||||| | |||||| |||||||||||||| || ||||||    
T  54143 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt 54087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 54115 - 54040
Alignment:
Q  95 ggaccaaattgattgatttataaaaaattgtcaaggaccaaattgatggattttcagaaaattgccaacggctcttt 171  Q
    |||| |||||||| |||||| | ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  54115 ggacgaaattgatggatttacacaaaatta-caaggaccaaattgatggattttcagaaaattggcaacggctcttt 54040  T

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Target: scaffold0920 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 1065 - 1154
Alignment:
Q  196 ttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  1065 ttcttctccaaatatataattttgataccctaatgttataatttgtcaactagagttcaaaatccacaaaatttcttccatgaattgatg 1154  T

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Target: scaffold0920; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 1175 - 1232
Alignment:
Q  228 atgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||||| |||||||| ||||| | | ||||||||||||||||||||||    
T  1175 atgttataatttgtcaactagagtttaaaattcacaaaatttcttccatgaattgatg 1232  T

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Target: scaffold0722 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 4442 - 4539
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatg 285  Q
    |||||||||||||| | ||||| |||||| ||| ||| ||||| ||| ||||||||| |||||||| ||||| | ||||| ||||||||| ||||||||    
T  4442 aacggctctttctttctcaaatctataaaattggaactctaattttacaatttgtcatctagagtttaaaat-ctccaaaattcttccattaattgatg 4539  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 63691 - 63617
Alignment:
Q  16 ttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgtcagatgccacgcaa 90  Q
    ||||||||||| |||||| || ||||| || |  ||||||||||||||||| ||||||||||||||| |||||||    
T  63691 ttaagttggtcagttaactgatgtgacatgcagtgttaacctcttacaaggcttaccacgtcagatgtcacgcaa 63617  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 57665 - 57704
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccct 226  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  57665 aacggctctttcttccccaaatatataaaattgaaaccct 57704  T

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Target: scaffold1041 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 2352 - 2391
Alignment:
Q  187 aacggctctttcttccccaaatatataaatttgaaaccct 226  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  2352 aacggctctttcttccccaaatatataaaattggaaccct 2391  T

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Target: scaffold1041; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Complemental strand, 2715 - 2686
Alignment:
Q  186 taacggctctttcttccccaaatatataaa 215  Q
    ||||||||||||||||||||||||||||||    
T  2715 taacggctctttcttccccaaatatataaa 2686  T

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