View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4928_1D_low_35 (Length: 248)
Name: NF4928_1D_low_35
Description: NF4928_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4928_1D_low_35 |
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Alignment Details
Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 32469588 - 32469395
Alignment:
| Q |
24 |
gtatgatgctctatatcttcttgcatttgcccacaatgtcttaaaaatataaatattttgaattttttaatggaaactaagttattagtaacttcttagc |
123 |
Q |
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| T |
32469588 |
gtatgatgccctatatcttcttgcatttgcccacaatgtcgtaaaaatatagatattttgaattttttaatggaaactaagttattagtaacttcttagc |
32469489 |
T |
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| Q |
124 |
atcatctgatgtgggactattaacaataagggaacaaaatgaaacaattaaatgaattaaggaaccaaatatctataacttctctttaactcca |
217 |
Q |
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|| || |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32469488 |
attatttgatgtgggactcttaacaataagagaacaaaattaaacaattaaatgaattaaggaaccaaatatctataacttctctttaactcca |
32469395 |
T |
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