View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4928_1D_low_40 (Length: 241)
Name: NF4928_1D_low_40
Description: NF4928_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4928_1D_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 34426823 - 34427044
Alignment:
| Q |
1 |
ggtcaagtcaagaaaggattatctaaaaagctacaatatttaaggttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacataaaggg |
100 |
Q |
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| T |
34426823 |
ggtcaagtcaagaaaggattatctaacaagctacaatatttaaggttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacataaaggg |
34426922 |
T |
|
| Q |
101 |
cacaggatgtttgacatcaggagtacaaagttaatcaagatatgagataatatttcatagtttatacctctctggtgttttcaggcatggaatcgtcaaa |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426923 |
cacaggatgtttgacatcagtagtacaaagttaatcaagatatgagataataattcatagtttatacctctctggtgttttcaggcatggaatcgtcaaa |
34427022 |
T |
|
| Q |
201 |
tctaacacagtaaagtaaaaag |
222 |
Q |
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||||| |||||||||||||||| |
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| T |
34427023 |
tctaatacagtaaagtaaaaag |
34427044 |
T |
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