View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928_1D_low_50 (Length: 226)

Name: NF4928_1D_low_50
Description: NF4928_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928_1D_low_50
NF4928_1D_low_50
[»] chr5 (8 HSPs)
chr5 (119-220)||(19870694-19870795)
chr5 (122-218)||(10826807-10826903)
chr5 (122-211)||(7250281-7250370)
chr5 (122-210)||(42449759-42449847)
chr5 (118-181)||(9042150-9042213)
chr5 (172-220)||(9042232-9042280)
chr5 (122-196)||(23062445-23062518)
chr5 (15-53)||(19870859-19870896)
[»] chr4 (6 HSPs)
chr4 (118-220)||(39390637-39390739)
chr4 (118-208)||(55741193-55741283)
chr4 (122-211)||(12028095-12028184)
chr4 (122-218)||(31302491-31302586)
chr4 (122-192)||(54603945-54604014)
chr4 (1-53)||(39390524-39390576)
[»] chr3 (11 HSPs)
chr3 (118-220)||(55146789-55146891)
chr3 (119-220)||(30716101-30716202)
chr3 (118-220)||(48161715-48161817)
chr3 (118-210)||(18946279-18946371)
chr3 (118-210)||(45031707-45031799)
chr3 (122-211)||(37222546-37222635)
chr3 (126-211)||(47867779-47867864)
chr3 (122-192)||(4950648-4950717)
chr3 (122-190)||(53562248-53562315)
chr3 (1-53)||(55146954-55147006)
chr3 (25-53)||(183464-183492)
[»] chr6 (4 HSPs)
chr6 (118-220)||(5614036-5614138)
chr6 (118-220)||(1259816-1259918)
chr6 (143-219)||(19273476-19273552)
chr6 (25-53)||(19273358-19273386)
[»] chr7 (12 HSPs)
chr7 (118-220)||(46529240-46529342)
chr7 (118-196)||(3938708-3938786)
chr7 (118-210)||(13953208-13953300)
chr7 (122-172)||(1804814-1804864)
chr7 (122-192)||(31592603-31592672)
chr7 (122-192)||(17733817-17733886)
chr7 (122-172)||(41957980-41958030)
chr7 (142-192)||(2393260-2393310)
chr7 (144-192)||(11409457-11409505)
chr7 (118-189)||(28510512-28510583)
chr7 (122-169)||(45414538-45414584)
chr7 (25-53)||(41958108-41958136)
[»] chr2 (6 HSPs)
chr2 (118-220)||(40614479-40614581)
chr2 (118-211)||(19508050-19508143)
chr2 (122-211)||(26170638-26170727)
chr2 (122-218)||(29899370-29899466)
chr2 (125-192)||(34457205-34457271)
chr2 (122-192)||(2121032-2121101)
[»] chr1 (7 HSPs)
chr1 (122-218)||(31385552-31385648)
chr1 (122-218)||(42465085-42465181)
chr1 (122-192)||(46200924-46200993)
chr1 (122-188)||(13706360-13706425)
chr1 (122-218)||(15292537-15292632)
chr1 (127-218)||(42058388-42058478)
chr1 (157-218)||(27108852-27108913)
[»] chr8 (6 HSPs)
chr8 (122-211)||(1550818-1550906)
chr8 (122-218)||(44119153-44119249)
chr8 (122-184)||(23877952-23878014)
chr8 (122-192)||(20495281-20495350)
chr8 (122-174)||(42100498-42100549)
chr8 (122-192)||(23718453-23718522)
[»] scaffold0013 (1 HSPs)
scaffold0013 (122-220)||(86660-86763)
[»] scaffold1813 (1 HSPs)
scaffold1813 (122-196)||(605-678)
[»] scaffold0251 (1 HSPs)
scaffold0251 (122-192)||(1803-1872)
[»] scaffold0184 (1 HSPs)
scaffold0184 (122-192)||(28395-28464)
[»] scaffold0078 (1 HSPs)
scaffold0078 (122-192)||(44380-44449)


Alignment Details
Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 19870795 - 19870694
Alignment:
Q  119 ctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19870795 ctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaataacttacttgtgaattaattgatgaaatttggcgcaaat 19870696  T
Q  219 tc 220  Q
    ||    
T  19870695 tc 19870694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 10826807 - 10826903
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||| | || |||||||||| |||||    
T  10826807 aaaattatgaaaactaacaccctaaacaacctacattgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttggctcaaat 10826903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 7250370 - 7250281
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaaga-acttacttgtgaattaatggatgaaatttgg 211  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||    
T  7250370 aaaattatgaaaactaacaccctaagcaacctacattgcatgtaaataagaag-aaagatacttacttgtgaattaattgatgaaatttgg 7250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 42449759 - 42449847
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttg 210  Q
    |||||||||||||||||||| |||||||| |||||||||||| |||||| ||| ||| ||||||||||| ||||| | || ||||||||    
T  42449759 aaaattatgaaaactaacaccctaaacaacctacattgcatgcaaatagaaagaaaataacttacttgttaattacttgaagaaatttg 42449847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 9042150 - 9042213
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaa 181  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  9042150 gctcaaatttatgaaaactaacaccctaaacaaactacattacatgtaaatagaaaggaaagaa 9042213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 9042232 - 9042280
Alignment:
Q  172 aaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaattc 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9042232 aaggaaagaacttacttgtgaattaattgatgaaatttggcgcaaattc 9042280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 23062518 - 23062445
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaatta 196  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||  ||| ||||||||||| |||||    
T  23062518 aaaattatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaataaaataacttacttgttaatta 23062445  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 19870896 - 19870859
Alignment:
Q  15 tacttttacactaaacaacaattccagcataaacaatac 53  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19870896 tacttttacactaaacaacaatt-cagcataaacaatac 19870859  T

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Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 39390637 - 39390739
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  39390637 gctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaggaacttacttgtgaattaattgatgaaatttggcgcaaa 39390736  T
Q  218 ttc 220  Q
    |||    
T  39390737 ttc 39390739  T

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Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 55741193 - 55741283
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatt 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||    
T  55741193 gctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtaaataggaagaaaagaactttcttgtgaattaattgaagaaatt 55741283  T

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Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 12028095 - 12028184
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttgg 211  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||| |||| || | |||||||||||||||||| ||||||||||||    
T  12028095 aaaattatgaaaactaacaccctaagcaacctacattgcatgtaaataagaagaaaggtacttacttgtgaattaattgatgaaatttgg 12028184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 31302586 - 31302491
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||  ||| ||||||||||| ||||| | || |||||||||| |||||    
T  31302586 aaaattatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaataaaataacttacttgttaattacttgaagaaatttggctcaaat 31302491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 54603945 - 54604014
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| |||||||| ||||||||| ||||||||||||| || | ||||||||||||    
T  54603945 aaaattatgaaaa-taacaccctaaacaacctacattgcttgtaaataggaagaaaggtacttacttgtga 54604014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39390524 - 39390576
Alignment:
Q  1 ggctagattatacttacttttacactaaacaacaattccagcataaacaatac 53  Q
    ||||| ||| ||| ||| ||||||||||||||||||||||  |||||||||||    
T  39390524 ggctacattgtacctacatttacactaaacaacaattccataataaacaatac 39390576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 55146891 - 55146789
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55146891 gctcaaaattatgaaaactaacaccctaaagaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttggcgcaaa 55146792  T
Q  218 ttc 220  Q
    |||    
T  55146791 ttc 55146789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 30716202 - 30716101
Alignment:
Q  119 ctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30716202 ctcaaaattatgaaaactaacaccctaaacaaactacactgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttggcgcaaat 30716103  T
Q  219 tc 220  Q
    ||    
T  30716102 tc 30716101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 48161817 - 48161715
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  48161817 gctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaagaaaagaacttacttatgaattaattgatgaaatttggcgcaaa 48161718  T
Q  218 ttc 220  Q
    |||    
T  48161717 ttc 48161715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 18946279 - 18946371
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttg 210  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18946279 gctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaataacttacttgtgaattaattgatgaaatttg 18946371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 45031799 - 45031707
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttg 210  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  45031799 gctcaaatttatgaaaactaacatcctaaacaaactacattgcatgtaaacaggaaggaaataacttacttgtgaattaattgatgaaatttg 45031707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 37222546 - 37222635
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttgg 211  Q
    |||||||||||||||||||| ||||  || |||||||||||||||||| |||| || | |||| ||||| ||||||| ||||||||||||    
T  37222546 aaaattatgaaaactaacaccctaagaaacctacattgcatgtaaataagaagaaaggtactttcttgtaaattaattgatgaaatttgg 37222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 47867864 - 47867779
Alignment:
Q  126 ttatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttgg 211  Q
    |||||||||||||||| |||| ||| |||||||||||||||||| |||| || | ||||||  |||||||||| ||||||||||||    
T  47867864 ttatgaaaactaacaccctaagcaacctacattgcatgtaaataagaagaaaggtacttaccagtgaattaattgatgaaatttgg 47867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 4950648 - 4950717
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||| ||| ||| |||||||||||||    
T  4950648 aaaattatgaaaa-taacaccctaaacaaactaccttgcatgtaaatagaaagaaaataacttacttgtga 4950717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 53562248 - 53562315
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgt 190  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| || | ||||||||||    
T  53562248 aaaattatgaaaac-aacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgt 53562315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 55147006 - 55146954
Alignment:
Q  1 ggctagattatacttacttttacactaaacaacaattccagcataaacaatac 53  Q
    ||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||    
T  55147006 ggctacattgtacctacatttacactaaacaacaattccagcataaacaatac 55146954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 183464 - 183492
Alignment:
Q  25 ctaaacaacaattccagcataaacaatac 53  Q
    |||||||||||||||||||||||||||||    
T  183464 ctaaacaacaattccagcataaacaatac 183492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 5614138 - 5614036
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  5614138 gctcaaacttatgaaaactaacaccctaaacagactacattgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttggtgcaaa 5614039  T
Q  218 ttc 220  Q
    |||    
T  5614038 ttc 5614036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 1259816 - 1259918
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  1259816 gctcaaaattataaaaactaacaccctaaacaaactacattgcatataaataggaaggaaagaacttacttgtgaattaattgaagaaattgggcgcaaa 1259915  T
Q  218 ttc 220  Q
    |||    
T  1259916 ttc 1259918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 19273476 - 19273552
Alignment:
Q  143 ctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaatt 219  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||| ||| ||||||    
T  19273476 ctaaacaaactacattgcatgtaaatatgaaggaaaaaacttacttgtgaattaattgaagaaattgggctcaaatt 19273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 19273358 - 19273386
Alignment:
Q  25 ctaaacaacaattccagcataaacaatac 53  Q
    |||||||||||||||||||||||||||||    
T  19273358 ctaaacaacaattccagcataaacaatac 19273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 46529240 - 46529342
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  46529240 gctcaaatttatgaaaactaacaccctaaacaaactacattgcatttaaataggaaggaaataacttacttgtgaattaattgatgaaatttagcgcaaa 46529339  T
Q  218 ttc 220  Q
    |||    
T  46529340 ttc 46529342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 3938786 - 3938708
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaatta 196  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3938786 gctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtaaataggaagaaaagaacttacttgtgaatta 3938708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 13953208 - 13953300
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttg 210  Q
    |||||||| |||| ||| ||| ||  ||||||||||||||||| |||||||| |||| | | ||||||||||||||||||| |||||||||||    
T  13953208 gctcaaaaatatgtaaaataaaaccttaaacaaactacattgcttgtaaatatgaagaatataacttacttgtgaattaattgatgaaatttg 13953300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 1804814 - 1804864
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaatagga 172  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1804814 aaaattatgaaaactagcaccctaaacaaactacattgcatgtaaatagga 1804864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 31592672 - 31592603
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  31592672 aaaattatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtga 31592603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 17733817 - 17733886
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    |||||||| |||| |||||| |||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  17733817 aaaattattaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtga 17733886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 41958030 - 41957980
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaatagga 172  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  41958030 aaaattatgaaaactagcaccctaaacaaactacattgcatctaaatagga 41957980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 2393260 - 2393310
Alignment:
Q  142 tctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||| ||||||||||||||||||||||| |||  ||||||||||||    
T  2393260 tctaaacaagctacattgcatgtaaataggaagaaaatgacttacttgtga 2393310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 11409457 - 11409505
Alignment:
Q  144 taaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||| ||||||||||||||||| | ||| |||||||||||||||||    
T  11409457 taaacaacctacattgcatgtaaatcgaaagaaaagaacttacttgtga 11409505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 28510512 - 28510583
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttg 189  Q
    ||||||||||| | ||| |||  | |||||||| ||||||||||||||||||||||| |||  |||||||||    
T  28510512 gctcaaaattaagtaaaataaagccctaaacaacctacattgcatgtaaataggaagaaaatgacttacttg 28510583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 45414584 - 45414538
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaata 169  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  45414584 aaaattatgaaaa-taacaccctaaacaaactacattgcgtgtaaata 45414538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 41958136 - 41958108
Alignment:
Q  25 ctaaacaacaattccagcataaacaatac 53  Q
    |||||||||||||||||||||||||||||    
T  41958136 ctaaacaacaattccagcataaacaatac 41958108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 40614479 - 40614581
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaa 217  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || ||| ||||||||    
T  40614479 gctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtatataggaaggaaagaacttacttgtgaattaatcgaagacattgggcgcaaa 40614578  T
Q  218 ttc 220  Q
    |||    
T  40614579 ttc 40614581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 19508143 - 19508050
Alignment:
Q  118 gctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttgg 211  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19508143 gctcaaaattataaaaactaacaccctaaacaaagtacattgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttgg 19508050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 26170727 - 26170638
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttgg 211  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||    
T  26170727 aaaattatgagaactaacaccctaaacaacctacattgcatgtaaataagaagaaaagaacttacttgtgagttaattgatgaaatttgg 26170638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 29899466 - 29899370
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||||||||||||||| |||||||| |||||||||||  |||||||||| ||| ||| ||||||| ||||| | || |||||||||| |||||    
T  29899466 aaaattatgaaaactaacaccctaaacaacctacattgcattgaaataggaagaaaataacatacttgttaattacttgaagaaatttggctcaaat 29899370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 34457271 - 34457205
Alignment:
Q  125 attatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  34457271 attatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaagaaaataacttacttgtga 34457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 2121032 - 2121101
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| || ||||| ||||||||||||||||||||||| ||   ||||||||||||    
T  2121032 aaaattatgaaaa-taacaccctgaacaacctacattgcatgtaaataggaagaaatatacttacttgtga 2121101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 31385648 - 31385552
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||| | || |||||||||| |||||    
T  31385648 aaaattatgaaaactaacaccctaaacaacctacattgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttggctcaaat 31385552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 42465085 - 42465181
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||| ||||||||||| ||||| | || |||||||| |||||||    
T  42465085 aaaattatgaaaactaacaccctaaacaacctacatttcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttgacgcaaat 42465181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 46200924 - 46200993
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  46200924 aaaattatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtga 46200993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 13706425 - 13706360
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttactt 188  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||  ||| |||||||||    
T  13706425 aaaattatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaacaaaataacttactt 13706360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 15292537 - 15292632
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||  ||  ||| ||||||||||| ||||| | ||  ||||||||| |||||    
T  15292537 aaaattatgaaaa-taacaccctaaacaaactacaatgcatgtaaataaaaataaaataacttacttgttaattacttgaacaaatttggctcaaat 15292632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 42058388 - 42058478
Alignment:
Q  127 tatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||| ||| |||||||||||||||| |||||||||||||| ||  ||| ||||||||||| ||||| | ||  ||||||||| |||||    
T  42058388 tatgaaaa-taatactctaaacaaactacgttgcatgtaaatagaaataaaataacttacttgttaattacttgaacaaatttggctcaaat 42058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 27108852 - 27108913
Alignment:
Q  157 ttgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||||||||||||||||| ||| ||||||||||| ||||| | || |||||||||| |||||    
T  27108852 ttgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttggctcaaat 27108913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 1550906 - 1550818
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttgg 211  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||    
T  1550906 aaaattatgaaaactaataccctaaacaatctacattgcatgtaaataggaagaaaataacttacttgtgaatt-attgatgaaatttgg 1550818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 44119153 - 44119249
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaatggatgaaatttggcgcaaat 218  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||| | || |||| ||||| |||||    
T  44119153 aaaactatgaaaactaacaccctaaacaacctacattgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaagttggctcaaat 44119249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 23878014 - 23877952
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaactt 184  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  23878014 aaaattataaaaactaacaccctaaacaatctacattgcatgtaaataggaagaaaagaactt 23877952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 20495281 - 20495350
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||| | |||||| |||||||| ||||||||||||||||||||| | || | ||||||||||||    
T  20495281 aaaattatgaata-taacaccctaaacaacctacattgcatgtaaataggaggaaaggtacttacttgtga 20495350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 42100498 - 42100549
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaag 174  Q
    ||||||||||||| |||||| ||||| || |||||||||||||||||||||||    
T  42100498 aaaattatgaaaa-taacaccctaaataacctacattgcatgtaaataggaag 42100549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 23718453 - 23718522
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| ||  || |||||||| ||||||||||||||||||||||| || | ||||| ||||||    
T  23718453 aaaattatgaaaa-tacaaccctaaacaacctacattgcatgtaaataggaagaaaggtacttatttgtga 23718522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 86660 - 86763
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaa-----cttacttgtgaattaatggatgaaatttggcgcaa 216  Q
    |||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||     ||||||||||||||||| || |||||| ||| |||    
T  86660 aaaattatgaaaactaacaccctaaacaacctacattgtatgtaaataggaagaaaagaaaagagcttacttgtgaattaattgaagaaattgggctcaa 86759  T
Q  217 attc 220  Q
    ||||    
T  86760 attc 86763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1813 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1813
Description:

Target: scaffold1813; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 605 - 678
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaatta 196  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||    
T  605 aaaattatgaaaa-taacatcctaaacaaactacattgcatgtaaatagaaagaaaataacttacttgttaatta 678  T

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Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 1803 - 1872
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  1803 aaaattatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtga 1872  T

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Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 28395 - 28464
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  28395 aaaattatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtga 28464  T

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Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 44449 - 44380
Alignment:
Q  122 aaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 192  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  44449 aaaattatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtga 44380  T

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