View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928_2D_low_12 (Length: 323)

Name: NF4928_2D_low_12
Description: NF4928_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928_2D_low_12
NF4928_2D_low_12
[»] chr2 (40 HSPs)
chr2 (21-132)||(39764881-39764991)
chr2 (99-191)||(40416374-40416466)
chr2 (106-180)||(3001386-3001460)
chr2 (98-191)||(21195660-21195753)
chr2 (99-191)||(42922414-42922507)
chr2 (98-177)||(39714991-39715070)
chr2 (99-178)||(42327392-42327471)
chr2 (103-193)||(9577840-9577930)
chr2 (102-191)||(13519036-13519126)
chr2 (98-191)||(34041572-34041665)
chr2 (99-191)||(11062360-11062452)
chr2 (145-193)||(33582019-33582067)
chr2 (98-177)||(29503270-29503349)
chr2 (99-189)||(18259730-18259820)
chr2 (98-191)||(4060198-4060291)
chr2 (100-180)||(16918573-16918653)
chr2 (99-191)||(19244109-19244201)
chr2 (97-177)||(37480073-37480153)
chr2 (98-193)||(11251086-11251181)
chr2 (97-176)||(29197375-29197454)
chr2 (98-192)||(7799018-7799112)
chr2 (107-177)||(21213777-21213847)
chr2 (110-175)||(12994376-12994441)
chr2 (98-191)||(14500276-14500369)
chr2 (98-191)||(23230589-23230681)
chr2 (96-191)||(33827686-33827779)
chr2 (154-195)||(39764988-39765029)
chr2 (98-179)||(42602553-42602634)
chr2 (99-191)||(41202250-41202342)
chr2 (99-170)||(28846691-28846762)
chr2 (107-193)||(6859294-6859380)
chr2 (206-236)||(39765116-39765146)
chr2 (98-191)||(1729815-1729908)
chr2 (99-176)||(4438978-4439055)
chr2 (99-180)||(5147674-5147755)
chr2 (99-180)||(13803495-13803576)
chr2 (98-191)||(19322767-19322860)
chr2 (99-184)||(23052514-23052599)
chr2 (98-191)||(45026742-45026835)
chr2 (96-177)||(45672376-45672457)
[»] chr7 (55 HSPs)
chr7 (98-214)||(23552117-23552233)
chr7 (106-193)||(41519247-41519333)
chr7 (99-191)||(15137553-15137645)
chr7 (99-191)||(26459394-26459486)
chr7 (98-179)||(45709704-45709785)
chr7 (98-193)||(23945860-23945955)
chr7 (99-170)||(48771938-48772009)
chr7 (99-189)||(25956279-25956368)
chr7 (98-180)||(43215183-43215265)
chr7 (98-191)||(17040996-17041089)
chr7 (99-184)||(23301593-23301678)
chr7 (99-191)||(39631844-39631936)
chr7 (110-177)||(21877819-21877886)
chr7 (130-193)||(37473645-37473708)
chr7 (99-177)||(22760863-22760941)
chr7 (97-191)||(35119381-35119475)
chr7 (106-191)||(15905658-15905742)
chr7 (99-183)||(18363696-18363780)
chr7 (100-164)||(22927477-22927541)
chr7 (99-191)||(24513797-24513889)
chr7 (116-191)||(9608613-9608688)
chr7 (116-191)||(9836185-9836260)
chr7 (122-193)||(21558151-21558222)
chr7 (106-193)||(42711965-42712052)
chr7 (99-190)||(43590907-43590998)
chr7 (99-177)||(20335829-20335907)
chr7 (97-191)||(33181194-33181288)
chr7 (140-193)||(2882991-2883044)
chr7 (119-176)||(8108601-8108658)
chr7 (98-191)||(25655212-25655305)
chr7 (96-193)||(30579332-30579429)
chr7 (106-179)||(43663091-43663164)
chr7 (129-193)||(5934151-5934215)
chr7 (99-155)||(25021355-25021411)
chr7 (99-191)||(33869429-33869521)
chr7 (106-193)||(4566410-4566497)
chr7 (99-170)||(7801180-7801251)
chr7 (98-191)||(17212050-17212141)
chr7 (106-177)||(19553461-19553531)
chr7 (99-178)||(30442488-30442567)
chr7 (99-193)||(39499703-39499795)
chr7 (149-192)||(41975937-41975980)
chr7 (99-150)||(45559200-45559251)
chr7 (110-165)||(48716291-48716346)
chr7 (98-180)||(13106777-13106858)
chr7 (119-177)||(25132376-25132434)
chr7 (110-179)||(14058264-14058333)
chr7 (110-179)||(14368292-14368361)
chr7 (96-177)||(18056773-18056854)
chr7 (102-155)||(36803647-36803700)
chr7 (99-168)||(42836008-42836077)
chr7 (99-191)||(25590611-25590703)
chr7 (99-191)||(31835192-31835284)
chr7 (102-166)||(39118493-39118557)
chr7 (120-192)||(45229008-45229080)
[»] chr3 (54 HSPs)
chr3 (99-191)||(37788449-37788541)
chr3 (103-193)||(2667866-2667956)
chr3 (99-210)||(203090-203201)
chr3 (98-193)||(36720380-36720475)
chr3 (99-193)||(4222141-4222235)
chr3 (99-193)||(14186648-14186741)
chr3 (98-179)||(10499105-10499186)
chr3 (98-191)||(27093345-27093438)
chr3 (98-191)||(31520589-31520682)
chr3 (106-191)||(53412952-53413037)
chr3 (103-179)||(4844507-4844583)
chr3 (103-179)||(4870203-4870279)
chr3 (110-193)||(32651420-32651503)
chr3 (135-193)||(52769965-52770023)
chr3 (106-191)||(13808869-13808954)
chr3 (99-180)||(16354887-16354968)
chr3 (98-191)||(30311305-30311398)
chr3 (99-191)||(8170672-8170764)
chr3 (99-170)||(2597225-2597296)
chr3 (98-177)||(5499405-5499484)
chr3 (106-189)||(30510185-30510268)
chr3 (99-180)||(10445134-10445216)
chr3 (98-192)||(32638944-32639038)
chr3 (104-178)||(38550401-38550475)
chr3 (98-180)||(46518627-46518709)
chr3 (106-192)||(53473372-53473458)
chr3 (100-177)||(47454615-47454692)
chr3 (99-191)||(8075111-8075203)
chr3 (99-179)||(16991542-16991622)
chr3 (99-191)||(31788955-31789046)
chr3 (98-191)||(34062532-34062627)
chr3 (107-191)||(51903862-51903946)
chr3 (98-169)||(7975417-7975488)
chr3 (98-169)||(8368805-8368876)
chr3 (107-170)||(11612307-11612370)
chr3 (99-190)||(14339610-14339701)
chr3 (106-169)||(49494152-49494215)
chr3 (98-191)||(15566612-15566702)
chr3 (99-191)||(21362937-21363027)
chr3 (98-191)||(15048045-15048138)
chr3 (122-191)||(28531042-28531111)
chr3 (99-191)||(28703388-28703480)
chr3 (99-191)||(40063619-40063711)
chr3 (107-170)||(12761520-12761583)
chr3 (98-192)||(11642192-11642286)
chr3 (145-191)||(20501742-20501788)
chr3 (129-191)||(44743839-44743901)
chr3 (134-191)||(3427537-3427594)
chr3 (152-193)||(13448376-13448417)
chr3 (99-191)||(32151419-32151508)
chr3 (99-180)||(37051289-37051370)
chr3 (106-177)||(17034995-17035064)
chr3 (99-179)||(21960551-21960631)
chr3 (98-134)||(26988995-26989031)
[»] chr1 (60 HSPs)
chr1 (90-192)||(33700756-33700858)
chr1 (98-191)||(8177166-8177259)
chr1 (99-192)||(11068826-11068919)
chr1 (99-192)||(51703779-51703872)
chr1 (99-191)||(9165179-9165271)
chr1 (98-192)||(4566547-4566641)
chr1 (97-191)||(6122792-6122886)
chr1 (98-180)||(36371469-36371551)
chr1 (110-191)||(52336758-52336839)
chr1 (98-193)||(6650594-6650689)
chr1 (106-193)||(17745238-17745325)
chr1 (99-177)||(19528325-19528403)
chr1 (98-191)||(8904413-8904506)
chr1 (106-191)||(15786304-15786389)
chr1 (98-192)||(35699951-35700047)
chr1 (98-191)||(40257398-40257491)
chr1 (100-193)||(44126396-44126489)
chr1 (112-192)||(28411343-28411423)
chr1 (106-193)||(21547462-21547549)
chr1 (99-190)||(52116766-52116857)
chr1 (97-191)||(2074000-2074093)
chr1 (99-176)||(9117119-9117196)
chr1 (139-192)||(40814391-40814444)
chr1 (99-192)||(42983357-42983450)
chr1 (98-179)||(51814493-51814574)
chr1 (111-191)||(2799874-2799954)
chr1 (99-191)||(10526823-10526915)
chr1 (99-191)||(38978927-38979018)
chr1 (98-191)||(15059515-15059606)
chr1 (98-169)||(25297771-25297842)
chr1 (145-184)||(26232352-26232391)
chr1 (99-193)||(7743307-7743401)
chr1 (99-169)||(47753714-47753784)
chr1 (117-191)||(50919972-50920046)
chr1 (99-192)||(2219972-2220065)
chr1 (98-191)||(11063555-11063648)
chr1 (102-135)||(35187922-35187955)
chr1 (123-179)||(12587294-12587350)
chr1 (99-191)||(31794248-31794340)
chr1 (99-191)||(44961765-44961857)
chr1 (100-191)||(2069657-2069747)
chr1 (106-177)||(17410238-17410309)
chr1 (126-193)||(17439944-17440011)
chr1 (98-193)||(25494051-25494146)
chr1 (119-178)||(31383795-31383854)
chr1 (99-193)||(50901581-50901675)
chr1 (106-180)||(1247120-1247194)
chr1 (99-191)||(8077641-8077731)
chr1 (99-177)||(12259260-12259338)
chr1 (99-177)||(15581140-15581217)
chr1 (99-177)||(16169976-16170054)
chr1 (99-153)||(19480527-19480581)
chr1 (146-192)||(30689059-30689105)
chr1 (123-180)||(3265948-3266005)
chr1 (106-163)||(26232398-26232455)
chr1 (98-175)||(41508830-41508907)
chr1 (145-193)||(3799952-3800000)
chr1 (99-191)||(16893394-16893486)
chr1 (152-192)||(28283584-28283624)
chr1 (123-195)||(31049637-31049709)
[»] chr4 (44 HSPs)
chr4 (99-192)||(51948480-51948573)
chr4 (93-193)||(7949436-7949536)
chr4 (99-191)||(37109335-37109427)
chr4 (106-191)||(7292782-7292867)
chr4 (99-191)||(28635696-28635788)
chr4 (106-193)||(21660126-21660213)
chr4 (106-193)||(21668890-21668977)
chr4 (97-192)||(27965486-27965588)
chr4 (106-193)||(13901749-13901836)
chr4 (154-193)||(47386773-47386812)
chr4 (99-193)||(39509070-39509164)
chr4 (99-177)||(47044717-47044795)
chr4 (114-191)||(38869783-38869860)
chr4 (99-210)||(33619206-33619318)
chr4 (106-193)||(43623426-43623513)
chr4 (99-177)||(19238575-19238653)
chr4 (117-191)||(23377974-23378048)
chr4 (99-177)||(55427198-55427276)
chr4 (99-193)||(2622377-2622475)
chr4 (116-177)||(30938217-30938278)
chr4 (106-191)||(49576878-49576963)
chr4 (111-191)||(4249189-4249269)
chr4 (99-191)||(7539590-7539682)
chr4 (99-191)||(8030188-8030280)
chr4 (99-191)||(31826609-31826701)
chr4 (108-179)||(2185028-2185099)
chr4 (99-170)||(9241030-9241101)
chr4 (98-191)||(32986190-32986281)
chr4 (106-193)||(41683756-41683843)
chr4 (117-191)||(16581711-16581785)
chr4 (98-192)||(19680771-19680865)
chr4 (99-191)||(33696392-33696482)
chr4 (99-180)||(37274454-37274536)
chr4 (99-191)||(40058965-40059055)
chr4 (103-193)||(43728399-43728488)
chr4 (99-193)||(46545711-46545805)
chr4 (146-191)||(9693482-9693527)
chr4 (116-193)||(13015444-13015521)
chr4 (98-127)||(21434810-21434839)
chr4 (102-191)||(44194968-44195057)
chr4 (98-151)||(51250546-51250599)
chr4 (120-189)||(52254390-52254459)
chr4 (99-191)||(5795393-5795485)
chr4 (98-170)||(24827824-24827896)
[»] chr8 (42 HSPs)
chr8 (99-193)||(23361631-23361725)
chr8 (98-193)||(16852339-16852434)
chr8 (98-190)||(19703472-19703564)
chr8 (102-192)||(35690047-35690137)
chr8 (117-193)||(6536538-6536614)
chr8 (99-191)||(11819776-11819868)
chr8 (110-191)||(43594302-43594383)
chr8 (98-191)||(44780098-44780191)
chr8 (99-179)||(968362-968442)
chr8 (101-177)||(2203494-2203570)
chr8 (98-166)||(5264543-5264611)
chr8 (99-191)||(6569755-6569847)
chr8 (99-191)||(18540298-18540390)
chr8 (99-191)||(26688865-26688957)
chr8 (99-191)||(27750730-27750822)
chr8 (99-191)||(30483868-30483960)
chr8 (101-179)||(3624582-3624660)
chr8 (98-191)||(12988427-12988520)
chr8 (149-193)||(7347887-7347931)
chr8 (99-191)||(33017214-33017306)
chr8 (104-192)||(42740499-42740587)
chr8 (99-154)||(20994479-20994534)
chr8 (99-178)||(29431011-29431090)
chr8 (151-192)||(34986149-34986190)
chr8 (98-178)||(3826774-3826854)
chr8 (99-191)||(8059632-8059724)
chr8 (99-155)||(32157191-32157247)
chr8 (99-191)||(33727857-33727949)
chr8 (93-193)||(43968980-43969080)
chr8 (98-193)||(8484998-8485093)
chr8 (101-180)||(8794340-8794419)
chr8 (98-177)||(10287474-10287553)
chr8 (99-170)||(23874387-23874458)
chr8 (98-177)||(28750570-28750648)
chr8 (100-175)||(29858049-29858124)
chr8 (145-192)||(40791878-40791925)
chr8 (98-172)||(4830486-4830560)
chr8 (99-191)||(42643231-42643321)
chr8 (114-179)||(1157074-1157139)
chr8 (117-180)||(31381374-31381434)
chr8 (98-179)||(35641897-35641978)
chr8 (109-177)||(18546360-18546428)
[»] chr5 (36 HSPs)
chr5 (99-191)||(25627057-25627149)
chr5 (106-178)||(43241679-43241751)
chr5 (99-193)||(29075781-29075875)
chr5 (97-191)||(34984804-34984898)
chr5 (98-191)||(87408-87500)
chr5 (98-191)||(14285160-14285253)
chr5 (98-190)||(30700603-30700693)
chr5 (98-191)||(30883182-30883275)
chr5 (99-179)||(14495801-14495881)
chr5 (99-191)||(21549121-21549213)
chr5 (106-193)||(22020844-22020931)
chr5 (99-193)||(6844729-6844823)
chr5 (99-193)||(16773807-16773901)
chr5 (99-193)||(43230756-43230852)
chr5 (99-191)||(7918453-7918545)
chr5 (99-191)||(19043458-19043550)
chr5 (112-191)||(37258350-37258429)
chr5 (99-173)||(892476-892550)
chr5 (97-179)||(29692382-29692464)
chr5 (98-175)||(30109308-30109385)
chr5 (106-190)||(1410645-1410728)
chr5 (99-170)||(5390857-5390926)
chr5 (99-177)||(16457810-16457888)
chr5 (99-193)||(17028246-17028340)
chr5 (99-193)||(21589288-21589382)
chr5 (130-179)||(12883871-12883920)
chr5 (106-191)||(41730549-41730634)
chr5 (110-191)||(43442207-43442288)
chr5 (138-193)||(29173529-29173584)
chr5 (138-193)||(29210397-29210452)
chr5 (99-132)||(3252332-3252365)
chr5 (106-191)||(19949600-19949684)
chr5 (99-191)||(33709614-33709703)
chr5 (106-170)||(16436625-16436688)
chr5 (109-193)||(18437095-18437179)
chr5 (123-191)||(25979194-25979262)
[»] scaffold0002 (1 HSPs)
scaffold0002 (106-192)||(94954-95040)
[»] scaffold0118 (1 HSPs)
scaffold0118 (99-191)||(41617-41709)
[»] chr6 (27 HSPs)
chr6 (98-193)||(12234489-12234584)
chr6 (97-191)||(12188287-12188381)
chr6 (99-193)||(3715452-3715546)
chr6 (99-177)||(24641188-24641266)
chr6 (98-179)||(33549103-33549184)
chr6 (98-193)||(24507518-24507613)
chr6 (101-192)||(32613123-32613214)
chr6 (106-188)||(10338161-10338243)
chr6 (99-193)||(30127400-30127494)
chr6 (100-193)||(6758404-6758497)
chr6 (106-191)||(6776591-6776676)
chr6 (106-191)||(11423573-11423658)
chr6 (98-191)||(13330086-13330179)
chr6 (123-191)||(4105075-4105143)
chr6 (119-179)||(6385882-6385942)
chr6 (99-190)||(21418470-21418561)
chr6 (98-169)||(31622997-31623068)
chr6 (106-177)||(34444810-34444881)
chr6 (99-191)||(13753234-13753324)
chr6 (158-191)||(4603046-4603079)
chr6 (99-192)||(12633009-12633102)
chr6 (110-191)||(28363948-28364029)
chr6 (99-191)||(3925744-3925836)
chr6 (108-191)||(11448875-11448955)
chr6 (147-191)||(14278095-14278139)
chr6 (115-191)||(20213057-20213133)
chr6 (115-191)||(22107080-22107156)
[»] scaffold0299 (1 HSPs)
scaffold0299 (106-191)||(11535-11620)
[»] scaffold0070 (1 HSPs)
scaffold0070 (99-192)||(42503-42596)
[»] scaffold0032 (1 HSPs)
scaffold0032 (99-193)||(112282-112376)
[»] scaffold0180 (1 HSPs)
scaffold0180 (110-191)||(19946-20027)
[»] scaffold0258 (1 HSPs)
scaffold0258 (99-179)||(15319-15399)
[»] scaffold0074 (1 HSPs)
scaffold0074 (122-193)||(45741-45812)
[»] scaffold1367 (1 HSPs)
scaffold1367 (106-183)||(832-909)
[»] scaffold0044 (1 HSPs)
scaffold0044 (120-176)||(92968-93024)
[»] scaffold0337 (1 HSPs)
scaffold0337 (98-193)||(1752-1847)
[»] scaffold0065 (1 HSPs)
scaffold0065 (98-193)||(12188-12283)
[»] scaffold0211 (1 HSPs)
scaffold0211 (99-180)||(24053-24134)
[»] scaffold0300 (1 HSPs)
scaffold0300 (107-191)||(4348-4432)
[»] scaffold0291 (1 HSPs)
scaffold0291 (99-177)||(2468-2546)
[»] scaffold0194 (1 HSPs)
scaffold0194 (109-179)||(13042-13112)
[»] scaffold0006 (1 HSPs)
scaffold0006 (103-193)||(162991-163081)
[»] scaffold0198 (1 HSPs)
scaffold0198 (138-179)||(10812-10853)
[»] scaffold0187 (2 HSPs)
scaffold0187 (99-132)||(12465-12498)
scaffold0187 (99-132)||(22793-22826)
[»] scaffold0063 (1 HSPs)
scaffold0063 (99-180)||(35384-35465)
[»] scaffold0013 (1 HSPs)
scaffold0013 (98-171)||(91124-91197)
[»] scaffold0009 (1 HSPs)
scaffold0009 (120-176)||(19846-19902)


Alignment Details
Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 39764881 - 39764991
Alignment:
Q  21 gcacaaacgactcctaattatactaatgttaagtcacttataaattgacctaaaataaagtaacttttaaattaatcaaacccatttgggttggcctagt 120  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  39764881 gcacaaacgactcctaattatactaatgttaagt-acttataaattgacctaaaacaaagtaacttttaaattaatcaaacccatttgggttgacctagt 39764979  T
Q  121 ggtattgacttg 132  Q
    ||||||| ||||    
T  39764980 ggtattggcttg 39764991  T

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Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 40416466 - 40416374
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||||||||||| || ||||  ||||||||||| ||||||||||||| ||||||||| ||| ||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaattt 40416374  T

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Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 3001386 - 3001460
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||| ||| |||||    
T  3001386 ttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgattatctct 3001460  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 21195753 - 21195660
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||| ||||||||||| | |||||||  | |||| |||||||||||  ||||||||||||| |||| |||||||||||||||    
T  21195753 aaacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaattt 21195660  T

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Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 42922414 - 42922507
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctcct-tgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||||| || |||| |||||||||||   ||||||||||||| ||||||||| ||| ||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaattt 42922507  T

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Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 39714991 - 39715070
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||| |||||||||| | ||||||||||||||| | || |||| ||||||||||| |||||||||||||| ||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

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Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 42327471 - 42327392
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  ||||||||||||| |||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 9577840 - 9577930
Alignment:
Q  103 catttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||  ||||||||||||||| ||| ||| || |||||||||||  |  ||||||||||||||| ||||||||| |||||||    
T  9577840 catttgggttggcacagtggtattgacttgaaatttagaagtgtgctcctcctcaatatctcaggttcaattccctctagtgttaatttag 9577930  T

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Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 13519126 - 13519036
Alignment:
Q  102 ccatttgggttggcctagtggtattgacttggaatctaggaga-gtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||||||  ||||||| | || |  ||||||||||||||||||||| |||| |||||||||| | |||||||    
T  13519126 ccatttgggttggcctagtggtattggtttggaatttggggggtgtgctcctccttgaggtctcaagttcgattctctctaatttcaattt 13519036  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 34041665 - 34041572
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||||||||||||||||||||||||| | ||||  ||| |||||||||||  ||||||||||||  |||| |||| ||| ||||||    
T  34041665 aaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaattt 34041572  T

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Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 11062360 - 11062452
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||| ||||| |||||||  | |||| ||||| |||||  ||||||||||||  ||||||||| ||||||||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaattt 11062452  T

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Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 33582019 - 33582067
Alignment:
Q  145 gtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  33582019 gtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttag 33582067  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 29503270 - 29503349
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||| ||||||||||||||||||||||  |||| | || |||| |||||||||||  ||||||||||||| ||||||    
T  29503270 aaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 18259730 - 18259820
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaat 189  Q
    |||||||||| |||||||| ||||||||| ||||  || |  ||| |||||||||||  ||||||||||||||| |||||| |||||||||    
T  18259730 aacccatttgagttggcctggtggtattggcttgagatttgagagtgtgctcctcctataggtctcaggttcaactctctccagtgtcaat 18259820  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 4060291 - 4060198
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||||||||||||||||  ||| || ||  ||| ||||| |||||  || |||||||||| ||||||||| ||||||||||    
T  4060291 aaacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaattt 4060198  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 16918653 - 16918573
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    ||||| ||||||||||||||||||||||  |||| |||| |||| |||||||||||  |||||| |||||  |||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctct 16918573  T

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Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 19244109 - 19244201
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||| ||| |||||||||||||| | ||  ||| ||||||||||   ||||||||||||| ||||||||| ||| ||||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaattt 19244201  T

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Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 37480073 - 37480153
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||||| |||||||||||| ||||||||| ||||| | ||  ||| |||||||||||  ||||||||||||| ||||||    
T  37480073 caaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 11251086 - 11251181
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| || ||||||| ||||||||||| ||||| |  | | || |||||||||||  ||||||||||||  ||||||||| ||||||||||||    
T  11251086 aaacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttag 11251181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 29197454 - 29197375
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattct 176  Q
    |||||||| |||||||||| | ||||||||||||||| |  | |||| |||||||||||||| |||||| |||| |||||    
T  29197454 caaacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattct 29197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 7799112 - 7799018
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||| |||||||| ||| ||||||||| ||||| |  | |||| ||||||||||| ||| |||||| ||| |||||||| |||| |||||||    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaattta 7799018  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 21213777 - 21213847
Alignment:
Q  107 tgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||||| || ||||||||| ||||| | || |||| ||| |||||||||||||||||||||| ||||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctc 21213847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 12994441 - 12994376
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattc 175  Q
    ||||| |||||||||||||||||| | || |||| |||||||||||| |||||||| |||| ||||    
T  12994441 gttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14500276 - 14500369
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||| |||||||||||||||   ||||  |||| |||| |||||||||||  ||||||||| ||| ||||||||| ||| ||||||    
T  14500276 aaacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaattt 14500369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 23230681 - 23230589
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||| | ||||||||||| |||| | || |||| |||||||||||  | ||  |||||||||||||||| |||||||||||    
T  23230681 aaacccaattgggttggtc-agtggtattgatttgggaactgggagtgtgctcctcctcaaagttccaggttcaattctctccagtgtcaattt 23230589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 33827779 - 33827686
Alignment:
Q  96 tcaaacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||| |||||||||||||  || ||||| |||| ||||| |||||||||  |||||||||||||| |||| |||| ||| ||||||    
T  33827779 tcaaacccatttggggttggcctagtggt--tggcttgggatcttggagattgctcctcca-gaggtctcaggttcgattccctctggtgccaattt 33827686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 39764988 - 39765029
Alignment:
Q  154 cttgaggtctcaggttcaattctctctagtgtcaatttagct 195  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  39764988 cttgaggtctcaggttcgattccctctagtgtcaatttagct 39765029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 42602553 - 42602634
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||| |||||||||||||||||||||| ||||| | || |||| |||||||| ||  |||||| |||||  ||||||||    
T  42602553 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctc 42602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 41202250 - 41202342
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||| ||||||||||| || ||||||||||| ||  |||| ||||  |||||||||| || |||| |||||||||| |||||  |||||||||    
T  41202250 aacctatttgggttggtctggtggtattgacctgagatctgggagtatgctcctcctcgaagtcttaggttcaattttctctgatgtcaattt 41202342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 28846691 - 28846762
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||| || |||||  |||||||||||||||||| | || |||| ||||||||||| || |||||||||||    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttc 28846762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 6859380 - 6859294
Alignment:
Q  107 tgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||| ||||| ||||||||||  || | |||| ||||||||| |  | ||||||||||| |||||||||| |||||| ||||    
T  6859380 tgggttggcatagtgatattgacttgtgatatgggagtgtgctcctcttcaaagtctcaggttcgattctctctaatgtcaacttag 6859294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 236
Target Start/End: Original strand, 39765116 - 39765146
Alignment:
Q  206 aaaaataaactcagtttttagtccttgaaat 236  Q
    |||||||||||||||||||||||||||||||    
T  39765116 aaaaataaactcagtttttagtccttgaaat 39765146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 1729815 - 1729908
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||| |||||||||||| ||||| |  | |||| |||||||||||  |||||| || ||  ||||||||| ||| ||||||    
T  1729815 aaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctggtgccaattt 1729908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 4439055 - 4438978
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattct 176  Q
    |||||| ||||||||||||| ||||||| |||||| ||||  ||| |||||||||||  ||||| || |||| |||||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgattct 4438978  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 5147755 - 5147674
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| ||||||||| |||||||||||||||||  |||| ||||  ||||||| ||  ||||||| | ||| |||||||||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctct 5147674  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 13803495 - 13803576
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||||||||||||  |||||| ||||| ||||  |  |||||| |||||||||||  ||||||||||||| ||| |||||    
T  13803495 aacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctct 13803576  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 19322767 - 19322860
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||  ||||||||||||  |||| | || |||| ||||||||| |  ||||||| ||||  ||||||||||||| ||||||    
T  19322767 aaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaattt 19322860  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 23052599 - 23052514
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtg 184  Q
    |||||| || ||||||||| ||||||||| ||||| |  | |||| ||||| |||||  ||||||||||||| |||||| ||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtg 23052514  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 45026742 - 45026835
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||| |||| ||| | ||| ||||||||||  |||||| |||||||||||  |||||||| |||  ||||||||| ||| ||||||    
T  45026742 aaacccacttggtttggtctattagtaatgacttggaacttaggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaattt 45026835  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 45672457 - 45672376
Alignment:
Q  96 tcaaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||| |||||||||||| ||||| ||| ||||  | || ||||  || |||||||  ||||||||||||||||||||    
T  45672457 tcaaacccacttgggttggccttgtggttttgccttgagaccttggagtatgttcctcctctaggtctcaggttcaattctc 45672376  T

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Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 23552117 - 23552233
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttagcttc 197  Q
    ||||||| |||||||||||||||| ||||||||||| | || |||| |||||||||||  |||||||| |||| |||||||||| || ||||||||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaatttagcttc 23552216  T
Q  198 ttaaaaataaaaataaa 214  Q
    ||||||| ||| |||||    
T  23552217 ttaaaaaaaaagataaa 23552233  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 41519333 - 41519247
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||  |||||||||||||  |||||||| ||||||||||||    
T  41519333 ttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttag 41519247  T

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Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 15137553 - 15137645
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||| |||||| |||||||| || |||||| |||||||||||  ||||||||||||  ||||||||| ||||||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaattt 15137645  T

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Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 26459486 - 26459394
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

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Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 45709785 - 45709704
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||||||||||||||||||||||||  ||||| ||||  ||| ||||||||||| |||||||||||||| ||| ||||    
T  45709785 aaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

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Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 23945860 - 23945955
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| |||||||| |||| |||||||||||| ||| ||  ||  ||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  23945860 aaacccacttgggttgacctaatggtattgacttagaacctgagaatgtgctcctcattgaggtctcaggttcgatcctctctaatgtcaatttag 23945955  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 48771938 - 48772009
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||| |||||||||| | ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttc 48772009  T

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Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 25956368 - 25956279
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaat 189  Q
    ||||||||||||||||||||||||||||| ||||| | || |||| |||||||| ||  |||||| ||||||||||||| || ||||||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcaattctccctggtgtcaat 25956279  T

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Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 43215183 - 43215265
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    ||||||| ||||||||| |||||||||||| ||||| | || |||| |||||||||||  ||||||||||||| |||||||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

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Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 17041089 - 17040996
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||| ||||||| |||| ||||| |||| | || |||||||||||  ||||||||||||| |||||||| |||| ||||||    
T  17041089 aaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaattt 17040996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 23301678 - 23301593
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtg 184  Q
    |||||| |||||||||||| ||||||||||||||| |  | |||| ||||||||||||||||||||| |||  ||||||| |||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtg 23301593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 39631844 - 39631936
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| | || ||||   |||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaattt 39631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 21877819 - 21877886
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||||||||||||||||||||| | || |||| |||||||||||| |||||||| |||| ||||||    
T  21877819 gttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctc 21877886  T

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Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 37473645 - 37473708
Alignment:
Q  130 ttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| |||||||||  ||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  37473645 ttgggatctaggagtttgctcctccttgaggtctcaggttcgattctccctaatgtcaatttag 37473708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 22760863 - 22760941
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| ||||||||| || ||||||||||||||| | || |||| |||||||||||  ||||||||||||| ||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 35119381 - 35119475
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||||||||||||||||| |||| || |  ||||| ||||  || | |||||||| ||||||| || || ||||||    
T  35119381 caaacccatttgggttggcctagtggtattgacttgggatctgggtgtatgctcatcctcaagatttcaggttcgattctctttaatgccaattt 35119475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 15905742 - 15905658
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| | ||||||| ||||| | || |||| |||||||||||| ||||||||||||| |||||| ||| |||||||||    
T  15905742 ttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctt-aggtctcaggttcgattctccctaatgtcaattt 15905658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 18363696 - 18363780
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagt 183  Q
    |||||| |||||||||||||||||||| | ||||  || | |||| |||||||||||  ||||||||||||  ||||||||||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagt 18363780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 22927477 - 22927541
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctc 164  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||| ||||| |||||  |||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtgcttctcctaaaggtctc 22927541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 24513797 - 24513889
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||  || | |||| || || |||||||||||||||||||| ||| || ||  |||||||||    
T  24513797 aacccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaattt 24513889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 9608688 - 9608613
Alignment:
Q  116 ctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||| | ||||| |||| |||| || ||||||||  || |||||||||| ||||||||||||||||||||    
T  9608688 ctagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaattt 9608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 9836260 - 9836185
Alignment:
Q  116 ctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||| | ||||| |||| |||| || ||||||||  || |||||||||| ||||||||||||||||||||    
T  9836260 ctagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaattt 9836185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 21558151 - 21558222
Alignment:
Q  122 gtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||| ||| ||  |||||||||||  ||||||||||||| ||||||||| ||| ||||||||    
T  21558151 gtattgacttggaacctaagaatgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttag 21558222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 42711965 - 42712052
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||| ||||||||||  ||||| |  | |||| |||||||||||  |||||||| |||| |||||| |||||||||||||||    
T  42711965 ttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttag 42712052  T

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Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 43590907 - 43590998
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    |||||| |||||||||||| ||||||||| ||||| |  | |||| |||||||||||  | ||||||||||| |||||| |||||| |||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 43590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 20335907 - 20335829
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| ||||||||| |||| ||||||| ||||| |  | |||| ||||||||||| |||||||||||||| ||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 33181288 - 33181194
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||| ||||||||||| | ||||| |  | |||| |||||||  ||  || |||||||||| |||| |||||||||||||||    
T  33181288 caaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctccaactcaagatctcaggttcgattccctctagtgtcaattt 33181194  T

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Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 2882991 - 2883044
Alignment:
Q  140 ggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| |||||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  2882991 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttag 2883044  T

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Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 8108601 - 8108658
Alignment:
Q  119 gtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattct 176  Q
    ||||||||||||||| || | |||| | |||||||||||||||||||||||| |||||    
T  8108601 gtggtattgacttgggatatgggagtgcgctcctccttgaggtctcaggttcgattct 8108658  T

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Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 25655305 - 25655212
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||  ||||||||  ||||||||||||||||| ||||  ||| ||| |||||||  |||| |||||||| ||||||||| ||| ||||||    
T  25655305 aaacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaattt 25655212  T

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Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 30579332 - 30579429
Alignment:
Q  96 tcaaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||| |||||||||||| ||||||||| ||||  | || |||| || | ||||||  ||||||||||||| ||| ||||| ||| ||||||||    
T  30579332 tcaaacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttag 30579429  T

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Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 43663164 - 43663091
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||||||||  |||||||||||||| | ||||||| ||| ||||||| ||| |||||||||| | ||||||    
T  43663164 ttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctc 43663091  T

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Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 5934151 - 5934215
Alignment:
Q  129 cttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||| |||| |||| ||||||||||||||||| ||| |||| |||| |||| ||||||||||||    
T  5934151 cttgggatctgggagtgtgctcctccttgaggtttcatgttcgattccctctggtgtcaatttag 5934215  T

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Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 25021411 - 25021355
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctcct 155  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 25021355  T

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Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 33869521 - 33869429
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||||||||| |||||| ||||  | || | || |||||||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaattt 33869429  T

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Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 4566497 - 4566410
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||||||||||| | | || |||| ||  |||| ||  ||||||||||||  ||||||||| ||| ||||||||    
T  4566497 ttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaatttag 4566410  T

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Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 7801180 - 7801251
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||| |||| ||||||| ||||||||||||||| | || |||| ||||||||| |  |||||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttc 7801251  T

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Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 17212050 - 17212141
Alignment:
Q  98 aaacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||| ||||| |||||||  || ||||| |||| ||||  |||||||||  |||||||||||||||||||||||| ||| ||||||    
T  17212050 aaacccatttggggttggcttagtggt--tggcttgggatcttggagtttgctcctcca-gaggtctcaggttcaattctctctggtgccaattt 17212141  T

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Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 19553461 - 19553531
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||||||||| ||||||||| ||||||  || |||| |||||||||||  |||||| |||||||||||||    
T  19553461 ttgggttggcctggtggtattggcttggac-ctgggagtgtgctcctcctcaaggtcttaggttcaattctc 19553531  T

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Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 30442488 - 30442567
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    |||||| ||||||||||| |||||||||| ||||| | || ||||  ||||||||||  |||||| |||||| |||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

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Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 39499795 - 39499703
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||||||||||||| ||||| | ||  ||| ||| ||||| || |||||||| |||| ||||| ||  ||||||||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgattctttc--gtgtcaatttag 39499703  T

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Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 41975937 - 41975980
Alignment:
Q  149 tcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||    
T  41975937 tcctcattgaggtctcaagttcgattctctctagtgtcaattta 41975980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 45559200 - 45559251
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctc 150  Q
    |||||| |||||||||||||||||||||| ||||||| || |||| ||||||    
T  45559200 aacccacttgggttggcctagtggtattggcttggaaccttggagtgtgctc 45559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 48716291 - 48716346
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctca 165  Q
    |||||| |||| ||||||||||||||||| |||| ||| |||||||| ||||||||    
T  48716291 gttggcttagtagtattgacttggaatctgggagtgtgttcctccttaaggtctca 48716346  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 13106858 - 13106777
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    ||||||| ||||||||  ||||| ||||||| |||| |||| |||| || ||||||||  ||||||||||||| |||||||||    
T  13106858 aaacccagttgggttgatctagtagtattgatttgggatct-ggagtgtactcctcctcaaggtctcaggttcgattctctct 13106777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 25132434 - 25132376
Alignment:
Q  119 gtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||||||| | | ||||||| |||||||| ||| ||||||||||||| ||||||    
T  25132434 gtggtattgacttaggacctaggagtgtgctccttcttaaggtctcaggttcgattctc 25132376  T

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Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 14058264 - 14058333
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||| ||||||||| ||||||| ||  ||| |||||| ||||  ||||||||||||| ||||||||    
T  14058264 gttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 14368292 - 14368361
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||| ||||||||| ||||||| ||  ||| |||||| ||||  ||||||||||||| ||||||||    
T  14368292 gttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

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Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 18056854 - 18056773
Alignment:
Q  96 tcaaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||| ||||||| | || |||||||||||||||    | |||| |||||||||||  ||||||||||||| ||||||    
T  18056854 tcaaacccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctc 18056773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 36803700 - 36803647
Alignment:
Q  102 ccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctcct 155  Q
    ||||||||||||| |||||||||||||||||| | || ||||  ||||||||||    
T  36803700 ccatttgggttggtctagtggtattgacttgggacctgggagtatgctcctcct 36803647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 42836077 - 42836008
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggt 168  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||| ||||  ||| |||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 25590611 - 25590703
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||| |||  |||||||| ||||  |||| |||| ||||||||||| |||||||| ||||| ||| |||   ||||||||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaattt 25590703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 31835192 - 31835284
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||| ||||| ||| |||||   || |||| |||||||||||  ||||||||||||| ||| || || ||| ||||||    
T  31835192 aacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattt 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 39118493 - 39118557
Alignment:
Q  102 ccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcag 166  Q
    |||||||||||| | |||||||||||||||  |||||| ||| ||||| || ||| |||||||||    
T  39118493 ccatttgggttgacttagtggtattgacttaaaatctacgagtgtgcttcttcttaaggtctcag 39118557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 45229080 - 45229008
Alignment:
Q  120 tggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||||  |||| | ||||||| ||||| || |||||||| | |||||| |||||||| ||||||||||||    
T  45229080 tggtattggtttgggacctaggagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaattta 45229008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 37788541 - 37788449
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt 37788449  T

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Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 2667866 - 2667956
Alignment:
Q  103 catttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||||||||| ||||||||| ||||| |||| |||| |||||| |||| |||||||||||||| ||| ||||||||||||||||||    
T  2667866 catttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttag 2667956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 203090 - 203201
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttagcttct 198  Q
    |||||| |||||||||||||||||||||||||||| |||  |||| |||||  ||||| |||| | |||||| ||| |||||||||  ||||||||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtgtgcttttccttaaggtttgaggttcgattatctctagtggtaatttagcttct 203189  T
Q  199 taaaaataaaaa 210  Q
    |||||| |||||    
T  203190 taaaaaaaaaaa 203201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 36720380 - 36720475
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| ||||||||| || ||||||||| ||||| || | |||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  36720380 aaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttag 36720475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 4222141 - 4222235
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||| ||||||||||| ||||| |||| |||| |||||||||||  | |||| |||||| ||||||||| ||||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttag 4222235  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 14186648 - 14186741
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  ||||||||||||| ||||||||  ||||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttag 14186741  T

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Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 10499186 - 10499105
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||| |||||||||||| ||||||||| ||||| |||| ||||  ||||| ||||||||||||||||||| ||||||||    
T  10499186 aaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctc 10499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 27093438 - 27093345
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||||||||||||||||||||| |||||||  | |||| |||||||||||  ||||||||||||  ||||||||| ||| ||||||    
T  27093438 aaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 27093345  T

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Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 31520682 - 31520589
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||||||||||| |||| |||| ||||| |||| |||| ||||||||||| ||||||| |||||  |||||||| |||||||||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaattt 31520589  T

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Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 53412952 - 53413037
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| |||||||||||| |||| || || |||| |||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  53412952 ttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaattt 53413037  T

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Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 4844583 - 4844507
Alignment:
Q  103 catttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||||||| || ||||||||||||||| |||| |||| ||||||||||| ||||||||||| || ||||||||    
T  4844583 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4844507  T

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Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 4870279 - 4870203
Alignment:
Q  103 catttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||||||| || ||||||||||||||| |||| |||| ||||||||||| ||||||||||| || ||||||||    
T  4870279 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4870203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 32651503 - 32651420
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||| ||||| | || |||| |||||||||||  || |||||| ||| ||||||||||||||||||||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttag 32651420  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 52770023 - 52769965
Alignment:
Q  135 atctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  52770023 atctgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttag 52769965  T

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Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 13808954 - 13808869
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| || ||  ||||||||||| |||| | || |||||||||||  |||||||||||||||||||||||| |||||||||    
T  13808954 ttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaattt 13808869  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 16354968 - 16354887
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| |||||||||||||||||||||| ||||||| ||  ||| |||||||||||   |||||||||||| |||||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctct 16354887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 30311305 - 30311398
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||  ||||||||||||||||||| | ||||| |||| |||| |||||||||||  ||||||||||||| ||||||| | ||| ||||||    
T  30311305 aaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaattt 30311398  T

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Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 8170672 - 8170764
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||||||||| |||| ||  | |||| |||||||| ||  ||||||||||||| |||  |||| ||||||||||    
T  8170672 aacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaattt 8170764  T

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Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 2597296 - 2597225
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||| ||||||||| || ||||||||| ||| | || |||||| ||||||||||||||||||||||||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtctcaggttc 2597225  T

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Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 5499484 - 5499405
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||| |||||||||||| ||||||||||||||  ||||  ||| |||||||||||| |||||| |||||| ||||||    
T  5499484 aaacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtctaaggttctattctc 5499405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 30510268 - 30510185
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaat 189  Q
    |||||||| ||| |||||| || ||||| | |||||||  ||||||| || |||||||||||||| ||||||||||||||||||    
T  30510268 ttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctctagtgtcaat 30510185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 10445216 - 10445134
Alignment:
Q  99 aacccatttgggttggcctagtggta-ttgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| ||||||||||||||||| | ||| ||||| | || |||| ||||||||||| |||||||||||||| |||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctct 10445134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 32638944 - 32639038
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||||||||||||  || ||||||||| ||||||| || |||| ||| || || | |||||||||||||| ||| |||| ||||||||||||    
T  32638944 aaacccatttgggttgttctggtggtattggcttggaaactgggagtgtgttcatcttcgaggtctcaggttcgattttctccagtgtcaattta 32639038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 38550475 - 38550401
Alignment:
Q  104 atttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    ||||||||||||||  |||||||||||| |  | | |||| ||||||||||||||||||| ||||||||||||||    
T  38550475 atttgggttggcctgttggtattgacttagggtttgggagtgtgctcctccttgaggtctgaggttcaattctct 38550401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 46518627 - 46518709
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    ||||||| |||||||||| ||||||||||| ||||| |||| |||| |||||||||||  |||| |||||||  |||||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctct 46518709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 53473372 - 53473458
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||| ||| ||| ||||||||||||||  ||||||||   | |||||||||||||| ||| ||||||||||||||| ||||||||||    
T  53473372 ttggtttgtcctggtggtattgacttgagatctaggattttactcctccttgaggtatcatgttcaattctctctaatgtcaattta 53473458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 47454692 - 47454615
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||| ||||||||  |||||||||||| ||||  |||| |||| ||||||||||| |||||||||||||| ||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 8075203 - 8075111
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||| |||||||||| ||||||||||| | ||||| |  | |||| |||||||||||  |||| |||||||| |||| |||||||||||||||    
T  8075203 aacctatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaattt 8075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 16991542 - 16991622
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||||||||||||||| ||||||||| ||||| |||| |||| || ||| || |||||||||||| ||  ||||||||    
T  16991542 aacccatttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtctcagttttgattctctc 16991622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 31789046 - 31788955
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||| ||||| ||||| |||| |||| ||||||||||| ||||| | |||||  ||| ||||| ||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctct-gtgtcaattt 31788955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 34062627 - 34062532
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctc--ctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||||| |||| ||||| |||| ||| | |||| ||||||  |||||  ||||||||||||||||||||||| ||| ||||||    
T  34062627 aaacccacttgggttggcccagtgatattggcttgaaatttgggagtgtgctctcctcctcaaggtctcaggttcaattctctctggtgccaattt 34062532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 51903946 - 51903862
Alignment:
Q  107 tgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||  |||||||| ||||| |||| |||| ||||||||||| | |||||||||||| ||||||||  ||||||||||    
T  51903946 tgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaattt 51903862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 7975417 - 7975488
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggtt 169  Q
    |||||||||| ||||||||||||||||| | ||||| |||| |||| |||||||||||  |||||| |||||    
T  7975417 aaacccatttaggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtcttaggtt 7975488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 8368876 - 8368805
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggtt 169  Q
    ||||||| ||| ||||||||||||||||||||||| || || | || |||||| |||| |||||||||||||    
T  8368876 aaacccaattgagttggcctagtggtattgacttgaaacctggtagtgtgctcatcctcgaggtctcaggtt 8368805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 11612307 - 11612370
Alignment:
Q  107 tgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    ||||||||||| |||||||| |||||| | || |||| |||||||||||| |||||||||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttc 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 14339610 - 14339701
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    |||||| |||| ||||||| ||||||||| ||||| || | |||| |||||||||||  | ||||||||||| |||||| |||||| |||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 14339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 49494215 - 49494152
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggtt 169  Q
    ||||||| ||||||||||||||||||| ||| | |||| |||||| |||| |||||||||||||    
T  49494215 ttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtt 49494152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 15566702 - 15566612
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||||||||||||  ||| ||||  |||| ||||  |||||||||  |||||||||||||| |||| |||||||| ||||||    
T  15566702 aaacccatttgggttggcctagtgg--ttggcttgagatcttggagtttgctcctcc-agaggtctcaggttcgattccctctagtgccaattt 15566612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 21362937 - 21363027
Alignment:
Q  99 aacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| |||||||||||||  |||||||| |||| ||||  |||||||||  |||||||||||||| |||| |||| ||||||||||    
T  21362937 aacccatttggggttggcctagtggt--tgacttgggatcttggagtttgctcctcca-gaggtctcaggttcgattccctctggtgtcaattt 21363027  T

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Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 15048138 - 15048045
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||||||||| || |||||| | ||||| |||| |||  |||||||||||  ||||||||||||| ||| ||||| ||| ||||||    
T  15048138 aaacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaattt 15048045  T

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Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 28531111 - 28531042
Alignment:
Q  122 gtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||| |||| ||||  |||||||||| ||||||| ||| |||||||||||| ||||||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaattt 28531042  T

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Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 28703480 - 28703388
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||| | |||| ||||  ||||| |||| |||| ||||||||| |  ||||||||||||| ||||||||| ||| ||||||    
T  28703480 aacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaattt 28703388  T

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Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 40063619 - 40063711
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||| | |||| |||||| ||||| ||||  |||  ||||||||||| |||||||| |||| |||||||| |||| ||||||    
T  40063619 aacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaattt 40063711  T

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Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 12761520 - 12761583
Alignment:
Q  107 tgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||||| || ||||||||||||||| | || |||| ||| ||||||||||| ||||||||||    
T  12761520 tgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttc 12761583  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 11642286 - 11642192
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||| |||| |||||||| ||||||  |||||| ||||  ||  ||| |||||||  ||||||||||||| ||| ||| |||||||||||||    
T  11642286 aaacccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcaggttcgattatctttagtgtcaattta 11642192  T

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Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 20501742 - 20501788
Alignment:
Q  145 gtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||||||    
T  20501742 gtgctcctccttaaggtctcaggttcgattctctccagtgccaattt 20501788  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 44743901 - 44743839
Alignment:
Q  129 cttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| |||| |||| ||||||||||| |||||||||||||| ||| |||| |||| ||||||    
T  44743901 cttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaattt 44743839  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 3427594 - 3427537
Alignment:
Q  134 aatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| |||| |||||||||||  ||||||||| ||| ||||||||||||| ||||||    
T  3427594 aatctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaattt 3427537  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 13448376 - 13448417
Alignment:
Q  152 tccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| |||||||||||||||||| |||||| |||||||||||    
T  13448376 tcctcgaggtctcaggttcaattttctctactgtcaatttag 13448417  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 32151419 - 32151508
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||||  ||||||||| |||| ||||  |||||||||   |||| |||  ||| ||||||||||||| ||||||    
T  32151419 aacccatttgggttggcctagtgg--ttgacttgggatcttggagtttgctcctcc-aaaggtttcaaattcgattctctctagtgccaattt 32151508  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 37051370 - 37051289
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| ||||||||   ||||| |||||| |||| |||| |||| ||| |||||||| | ||||||||||| |||||||||    
T  37051370 aacccacttgggttgatttagtgatattgatttgggatctgggagtgtgttcctccttaaagtctcaggttcgattctctct 37051289  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 17034995 - 17035064
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||  || ||||||||||||||| ||||  |||||||||| ||||  ||||||||||||| ||||||    
T  17034995 ttgggttgctctggtggtattgacttgggatct--gagagtgctcatcctcaaggtctcaggttcgattctc 17035064  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 21960551 - 21960631
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||| ||||||||  || ||||||||| ||||| | ||  ||| ||||||||||| |||||||||| ||| ||||||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 26988995 - 26989031
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttgga 134  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  26988995 aaacccacttgggttggcctagtggtattggcttgga 26989031  T

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Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 33700858 - 33700756
Alignment:
Q  90 aattaatcaaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaat 189  Q
    ||||||| || |||| |||||||||||||||||||||| |||||||||| |||| |||||||||||  ||||||||||||| ||||||||| ||| ||||    
T  33700858 aattaattaagcccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaat 33700759  T
Q  190 tta 192  Q
    |||    
T  33700758 tta 33700756  T

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Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 8177259 - 8177166
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||| |||||||||||||||||| ||||| |||| |||| |||||||||||  |||| |||||||| ||||||||| ||| ||||||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaattt 8177166  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 11068919 - 11068826
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||||||||||||  || ||||||||||||||| ||| ||||| ||||||||| |||||  ||||| |||||||||||| ||||||||||||    
T  11068919 aacccatttgggttgatctggtggtattgacttgggatccaggagtgtgctcctctttgagacctcagattcaattctctccagtgtcaattta 11068826  T

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Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 51703779 - 51703872
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||  | || |||||||| ||||||||| || ||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctggtatcaattta 51703872  T

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Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 9165271 - 9165179
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  | ||||||||||||||||||||| ||| ||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaattt 9165179  T

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Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 4566547 - 4566641
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||| |||||||||||||||| ||||| ||||||| || |||| |||||||||||   |||||||||||| |||||||||  ||||||||||    
T  4566547 aaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaattta 4566641  T

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Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 6122792 - 6122886
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||| ||||||||||| | ||||| |  | |||| |||||||||||  ||||||||||||| |||| |||||||||||||||    
T  6122792 caaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaattt 6122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 36371469 - 36371551
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    ||||||| |||||||||||||||||||||| ||||||| || |||| |||||||||||  |||||| |||||| |||||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctct 36371551  T

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Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 52336839 - 52336758
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||||| ||||| |||| |||| |||||||||||| || |||||||||| ||| ||||| ||||||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaattt 52336758  T

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Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 6650594 - 6650689
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| || ||||||||||||||||||| ||||| |||  ||||  ||||||||||  | ||||||||||| ||||||||| ||||||||||||    
T  6650594 aaacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttag 6650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 17745325 - 17745238
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||||||| ||||| | ||  | | ||||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  17745325 ttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttag 17745238  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 19528403 - 19528325
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| |||||||||||| ||||||||| ||||| ||||| ||| |||||||||||  ||||||||||||| ||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 8904413 - 8904506
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||||||||| |||||||||||| || |  ||| |||||||||||  |||||||| |||| ||||||||| ||| ||||||    
T  8904413 aaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaattt 8904506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 15786389 - 15786304
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| ||||| |||||| ||||| |||| |||| |||||||||||  ||||||||||||| ||||||| | ||||||||||    
T  15786389 ttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 35699951 - 35700047
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctca--ggttcaattctctctagtgtcaattta 192  Q
    |||| ||||||||||||||||||||||||||||||||| || | || ||||| || ||  ||||||||  ||||| ||||||||| |||||||||||    
T  35699951 aaactcatttgggttggcctagtggtattgacttggaaactggaagtgtgcttctgctcaaggtctcaggggttcgattctctctggtgtcaattta 35700047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 40257398 - 40257491
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||||||||||| ||||||||| ||||  | || |||| ||||||||||| ||||||||| |||||||||| ||  ||||||||||    
T  40257398 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaattt 40257491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 44126396 - 44126489
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||| |||||||||||| ||||||||||| ||| | || |||| ||||||||||  |||||||||| ||  ||||||||||||| ||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttag 44126489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 28411343 - 28411423
Alignment:
Q  112 tggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||| ||||||||||||||| || |  ||| ||||||||| |||||||||||| ||||||||||||| ||| |||||||    
T  28411343 tggcctggtggtattgacttgggatatgagagtgtgctcctctttgaggtctcagattcaattctctctggtgccaattta 28411423  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 21547549 - 21547462
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||||||| ||||| |  | |||| ||||||||||| ||||| |||||||| |||||||||  || ||||||||    
T  21547549 ttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttag 21547462  T

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Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 52116857 - 52116766
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    |||||| |||||||||||| ||||||||| ||||| |  | |||| |||||||||||  | |||||||||||||||||| |||||| |||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaatt 52116766  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 2074000 - 2074093
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||| || |||||||||||| ||||| | | ||||||||||| || ||||||  ||||| || |||| ||||||||||    
T  2074000 caaacccatttgggttggcctggttgtattgacttgggatcta-gcgtgtgctcctcctcgaagtctcatattcaaatccctctggtgtcaattt 2074093  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 9117119 - 9117196
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattct 176  Q
    ||||||||||||||||||   |||||| | ||||| |||| | || |||||||||||||||||||||||||| |||||    
T  9117119 aacccatttgggttggccggttggtatgggcttgggatctggaagtgtgctcctccttgaggtctcaggttcgattct 9117196  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 40814444 - 40814391
Alignment:
Q  139 aggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||| |||||| |||||||||| |||||||| |||||||||||||||||||||    
T  40814444 aggagtgtgctcatccttgaggtttcaggttcgattctctctagtgtcaattta 40814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 42983450 - 42983357
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||| |||||||||||| | ||||||||||||||  |||| |||| ||| ||||||||||||||  |||||| ||||||||  ||| |||||||    
T  42983450 aacctatttgggttggcatggtggtattgacttgagatctgggagtgtggtcctccttgaggtccgaggttcgattctctcaggtgccaattta 42983357  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 51814493 - 51814574
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||| ||||||||||||  |||||||||||||  ||||  ||| |||||||||||  ||||||||||||| ||||||||    
T  51814493 aaacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 2799874 - 2799954
Alignment:
Q  111 ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||| | ||||  |||| |||| |||||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  2799874 ttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 2799954  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 10526823 - 10526915
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||| | |||||||||| ||||| | || ||||  ||||||||||  ||||||||| ||| ||||||||| | ||||||||    
T  10526823 aacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaattt 10526915  T

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Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 38979018 - 38978927
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||||||||||||||  | ||||||| |||||  |||   |||||||| |||||| |||||| |||| ||||||    
T  38979018 aacccatttgggttggcctagtggtattgacttgagacctaggagtgtgct-ttccacaaggtctcatgttcaactctctccagtgccaattt 38978927  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 15059606 - 15059515
Alignment:
Q  98 aaacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||| |||||||||||||  || |||||||||| ||||  |||||||||  |||||||||||||| ||||||||| ||| ||||||    
T  15059606 aaacccatttggggttggcctagtggt--tggcttggaatcttggagtttgctcctcca-gaggtctcaggttcgattctctctggtgccaattt 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 25297771 - 25297842
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggtt 169  Q
    ||||||| ||||||||| |||||||||||||||| | ||||  ||| ||||||||||| ||||||| |||||    
T  25297771 aaacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtt 25297842  T

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Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 26232391 - 26232352
Alignment:
Q  145 gtgctcctccttgaggtctcaggttcaattctctctagtg 184  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  26232391 gtgctcctccttgaggtctcaggttcaattctctccagtg 26232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 7743401 - 7743307
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||||||||||||||| ||| ||||| | |||| ||| |||||||  |||||||| |||| ||| |||  | |||||||||||    
T  7743401 aacccacttgggttggcctagtggtattaactaggaatttgggagtgtggtcctcctctaggtctcaagttcgattatctaaaatgtcaatttag 7743307  T

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Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 47753714 - 47753784
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggtt 169  Q
    ||||||||| ||||| ||| || |||||||||||| ||||||||  |||||||||||  ||||||||||||    
T  47753714 aacccatttaggttgacctggtcgtattgacttgggatctaggactgtgctcctcctcaaggtctcaggtt 47753784  T

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Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 50919972 - 50920046
Alignment:
Q  117 tagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||| || ||  ||| |||||| ||||| |||| |||||||| ||||||||| ||||||||||    
T  50919972 tagtggtattgacttgaaacctgagagtgtgctcatccttaaggtttcaggttcgattctctctggtgtcaattt 50920046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 2219972 - 2220065
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||| ||||||||  || ||||||||| ||||||| ||   || ||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaattta 2220065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 11063555 - 11063648
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||  |||||||||||| ||||| | ||   || ||| |||||||  |||||| |||||| ||||||||||||| ||||||    
T  11063555 aaacccatttgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctctagtgccaattt 11063648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 35187922 - 35187955
Alignment:
Q  102 ccatttgggttggcctagtggtattgacttggaa 135  Q
    ||||||||||||||||||||||||||||||||||    
T  35187922 ccatttgggttggcctagtggtattgacttggaa 35187955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 12587294 - 12587350
Alignment:
Q  123 tattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||||||| ||||  ||| ||||||||||| |||||||||||||| ||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 31794340 - 31794248
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| |  | |||| |||||||||||  ||||||   |||| |||| |||| ||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaattt 31794248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 44961765 - 44961857
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||| |  ||||||||  ||||  || || ||| |||||||||||   |||||||||||| ||||||||||||||||||||    
T  44961765 aacccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaattt 44961857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 2069657 - 2069747
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||||| || |||||||||||| |||| ||   ||||||||||| || ||||||  ||||| || |||| ||||||||||    
T  2069657 acccatttgggttggcctggttgtattgacttgggatct-ggcatgtgctcctcctcgaagtctcatattcaaatccctctggtgtcaattt 2069747  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 17410238 - 17410309
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||||||||||||||||  |||| |||| |||| ||| ||||||| ||| ||||| |||| ||||||    
T  17410238 ttgggttggcctagtggtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctc 17410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 17439944 - 17440011
Alignment:
Q  126 tgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| | |||| |||| ||||||||||| ||||||||| |||  |||||||| |||||||||||||    
T  17439944 tgacttaggatctgggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaatttag 17440011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 25494146 - 25494051
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| |||  ||| ||||||||||||| ||||| |||||||||  |||| ||||| ||||||||  ||||  ||||| |||||| ||||||||    
T  25494146 aaacccacttgaattgacctagtggtattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttag 25494051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 31383854 - 31383795
Alignment:
Q  119 gtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    ||||||||| ||||| | || |||| ||||||||||||| |||||||||||| |||||||    
T  31383854 gtggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctct 31383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 50901581 - 50901675
Alignment:
Q  99 aacccatttgggttggcctagtggt-attgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||||||||| |||| ||||| | || | || ||||||||||| |||||||||  ||| |||||||| |||| ||||||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttag 50901675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 1247120 - 1247194
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||||||| |||||||| ||| ||| || || |||| || ||||||||  ||||||||||||| |||||||||    
T  1247120 ttgggttggcttagtggtactgatttgaaacctgggagtgtactcctcctcaaggtctcaggttcgattctctct 1247194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 8077641 - 8077731
Alignment:
Q  99 aacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| |||||||||||||  || ||||| |||| ||||  |||||||||  |||||||||||||| ||||||||| ||| ||||||    
T  8077641 aacccatttggggttggcctagtggt--tggcttgggatcttggagtttgctcctcca-gaggtctcaggttcgattctctctggtgccaattt 8077731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 12259260 - 12259338
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| |||||||||| ||||| |||| |||||| || | |||| ||||||||||| || |||||| |||| ||||||    
T  12259260 aacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 15581217 - 15581140
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| |||||||||||| ||||| ||| ||||| | || |||| |||||||| ||  ||||||||||||||||||||    
T  15581217 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctaaaggtctcaggttcaattctc 15581140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 16170054 - 16169976
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| ||||||| |||| ||||||||||||||| | || |||| ||| |||||||  |||| |||||||| ||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 19480527 - 19480581
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctc 153  Q
    |||||||||||||||||||  |||| ||||||||| |||| |||| |||||||||    
T  19480527 aacccatttgggttggccttatggtgttgacttgggatcttggagtgtgctcctc 19480581  T

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Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 30689059 - 30689105
Alignment:
Q  146 tgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||||||||||||||||| ||||||||||| | |||| |||||||    
T  30689059 tgctcctccttgaggtctcatgttcaattctccccagtgccaattta 30689105  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 3265948 - 3266005
Alignment:
Q  123 tattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||||||||||  | |||| |||||||||||  ||||||||||||| |||||||||    
T  3265948 tattgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctct 3266005  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 26232455 - 26232398
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtct 163  Q
    ||||||||| |||||||||||| ||||  |||| |||| |||||||| ||||||||||    
T  26232455 ttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggtct 26232398  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 41508830 - 41508907
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattc 175  Q
    ||||||| |||||||||||| |||||| ||  |||| |||| |||| |||||||||||  ||||||||| || |||||    
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattc 41508907  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 3799952 - 3800000
Alignment:
Q  145 gtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||||| || || |||||||| ||||||||||||| ||||||||    
T  3799952 gtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttag 3800000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 16893394 - 16893486
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||| |||  |||||||| ||||  || | |||| || |||||||| |||||||||||||| ||| ||||  ||||||||||    
T  16893394 aacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaattt 16893486  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 28283584 - 28283624
Alignment:
Q  152 tccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||| ||||||||||| ||||||||| |||||||||||    
T  28283584 tccttgatgtctcaggttcgattctctctggtgtcaattta 28283624  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 31049637 - 31049709
Alignment:
Q  123 tattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttagct 195  Q
    ||||| ||||| ||||||||| |||||||||||  || |||||  ||| ||||||||| |||||| |||||||    
T  31049637 tattggcttgggatctaggagtgtgctcctcctaaagatctcatcttcgattctctctggtgtcagtttagct 31049709  T

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Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 51948480 - 51948573
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||| |||||||| ||| || |||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaattta 51948573  T

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Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 7949536 - 7949436
Alignment:
Q  93 taatcaaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||| ||||||| ||||| |||||||| ||||||| ||||| | || |||| |||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  7949536 taatgaaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattta 7949437  T
Q  193 g 193  Q
    |    
T  7949436 g 7949436  T

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Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 37109427 - 37109335
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

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Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 7292867 - 7292782
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| |||||||||||| ||||||| || |||| |||||||||||  | ||||||||||| ||||||||||||| ||||||    
T  7292867 ttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaattt 7292782  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 28635696 - 28635788
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||| ||| |||||| |||||||| |||| |||| ||||||||||| ||||||| |||||| ||||||||| ||| ||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaattt 28635788  T

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Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 21660213 - 21660126
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||| || ||||||||||||||  |||| |||| |||||| |||| ||||||||| |||| ||| ||||||||||||||||||    
T  21660213 ttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttag 21660126  T

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Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 21668977 - 21668890
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||| || ||||||||||||||  |||| |||| |||||| |||| ||||||||| |||| ||| ||||||||||||||||||    
T  21668977 ttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttag 21668890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 27965588 - 27965486
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtg-------ctcctccttgaggtctcaggttcaattctctctagtgtcaat 189  Q
    |||||||| |||||||||||||||||||||| ||||| |||| |||| |||       |||||||||||||||||| |||| |||||||||| |||| ||    
T  27965588 caaacccacttgggttggcctagtggtattggcttgggatctgggagtgtgcagtggactcctccttgaggtctcaagttcgattctctctaatgtcgat 27965489  T
Q  190 tta 192  Q
    |||    
T  27965488 tta 27965486  T

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Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 13901749 - 13901836
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||| |||||||||||| ||||  | || |||| ||| ||||||||||||||||| |||||||||| |||| ||| |||||||    
T  13901749 ttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctcaagttcaattctatctaatgttaatttag 13901836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 47386812 - 47386773
Alignment:
Q  154 cttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  47386812 cttgaggtctcaggttcaattctctctagtgtcaatttag 47386773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 39509070 - 39509164
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||| ||  ||||| || ||||| |||| |||| ||||||||||| |||||||||||||| |||||| | |||| ||||||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttag 39509164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 47044717 - 47044795
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| |||| ||||||| ||||||||||||||| ||||  |||  |||||||||| |||||||||||||| ||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

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Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 38869783 - 38869860
Alignment:
Q  114 gcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||| ||||| |||| |||| |||||||||||  ||||||||||||| |||| |||| ||| ||||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

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Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 33619206 - 33619318
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttagcttct 198  Q
    |||||| |||||||| | | ||||||||| ||| | |||| |||| ||| ||||||||||||||| |||||| |||||||   ||| ||||||||||| |    
T  33619206 aacccacttgggttgccttggtggtattggcttaggatctgggagcgtggtcctccttgaggtcttaggttcgattctcttcggtgccaatttagcttat 33619305  T
Q  199 t-aaaaataaaaa 210  Q
    | |||||||||||    
T  33619306 tcaaaaataaaaa 33619318  T

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Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 43623513 - 43623426
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| | |||||| ||||||||||  |||  |||| |||||||||||||| ||||||||||| ||||||| ||||  ||||||||    
T  43623513 ttgggttagtctagtgatattgacttgagatcagggagtgtgctcctccttgaagtctcaggttcgattctctatagtagcaatttag 43623426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 19238653 - 19238575
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| |||||||||||| ||||||||| ||||| |  | |||| ||||||||||| |||||||| ||||| ||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 23377974 - 23378048
Alignment:
Q  117 tagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| ||||| ||||| | || |||| |||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  23377974 tagtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt 23378048  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 55427276 - 55427198
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| |||||||||||| ||||||||| ||||| | || ||||  ||||||| || |||||||||||||| ||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 2622475 - 2622377
Alignment:
Q  99 aacccatttgggttggcctagtggtattga----cttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||||||||||||||| |    ||||| | || |||| |||||||||||  | ||||||||||| ||||||||| ||| ||||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaatttag 2622377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 30938278 - 30938217
Alignment:
Q  116 ctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||||||  |||| |||| |||| ||||||||||| |||||||||||||| ||||||    
T  30938278 ctagtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 49576963 - 49576878
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| ||||||||| ||| | |  | |||| |||||||||||  ||||||||||||| |||||||| | |||||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaattt 49576878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 4249189 - 4249269
Alignment:
Q  111 ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||| | ||||| || | |||| |||||||||||  ||||||||||||  ||||||||| ||| ||||||    
T  4249189 ttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 4249269  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 7539590 - 7539682
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| | |||| ||||||||||||| || | |||| ||||  ||||||| ||  ||||||||||||| |||||||||  |||||||||    
T  7539590 aacccatttagattggtctagtggtattgattttggatctgggagtatgctccttctcaaggtctcaggttcgattctctcttctgtcaattt 7539682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 8030280 - 8030188
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||| ||| ||||||||||| | ||||| |  | |||| |||||||||||  |||||||| |||| |||| |||||||||||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaattt 8030188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 31826609 - 31826701
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||| ||||||||||| | ||||| || |  ||| |||||||||||  |||||||| |||| |||| || ||||||||||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaattt 31826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 2185099 - 2185028
Alignment:
Q  108 gggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||||||||||||| || ||||||| || |||| |||||||| ||  | ||||||||||| ||||||||    
T  2185099 gggttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctc 2185028  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 9241101 - 9241030
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||| |||||||||||| ||||||||| ||||| |||| | || |||||||| || ||||||| ||||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttc 9241030  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 32986190 - 32986281
Alignment:
Q  98 aaacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||| |||||||||||||  || ||||| |||| ||||  |||||||||  ||||||||||||||||||| |||| ||| ||||||    
T  32986190 aaacccatttggggttggcctagtggt--tggcttgggatcttggagtttgctcctcca-gaggtctcaggttcaattccctctggtgccaattt 32986281  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 41683756 - 41683843
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||| ||||||||||||| ||||||| ||  ||| |||||||| ||  | || ||| |||||||||| ||||||| ||||||||    
T  41683756 ttgggttgacctagtggtattggcttggaacctgagagtgtgctccttctcaaagtttcacgttcaattctttctagtgccaatttag 41683843  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 16581711 - 16581785
Alignment:
Q  117 tagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||| ||||||| || ||||  ||||||||||  ||||||||||||| ||| ||||| ||| ||||||    
T  16581711 tagtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaattt 16581785  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 19680865 - 19680771
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||| |||| ||||||||||||||||  ||||| |  | |||| |||||| ||||  |||||| |||||| ||||||||| ||| |||||||    
T  19680865 aaacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaattta 19680771  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 33696482 - 33696392
Alignment:
Q  99 aacccattt-gggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| ||||||||||||||||  || ||||| |||| ||||  |||||||||  ||||||||||||||||||| |||| ||| ||||||    
T  33696482 aacccatttagggttggcctagtggt--tggcttgggatcttggagtttgctcctcca-gaggtctcaggttcaattccctctggtgccaattt 33696392  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 37274536 - 37274454
Alignment:
Q  99 aacccatttgggttggcctagtggta-ttgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| ||||||||||||||| ||| ||| ||||| | || |||| |||||||||||  |||||| |||||| |||||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctct 37274454  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 40059055 - 40058965
Alignment:
Q  99 aacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| |||||||||||||  || ||||| |||| ||||  |||||||| | |||||||||||||| ||||||||| ||| ||||||    
T  40059055 aacccatttggggttggcctagtggt--tggcttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctggtgccaattt 40058965  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 43728399 - 43728488
Alignment:
Q  103 catttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||||||  | |||||||||||||   |||| |||| |||||||||||  | ||||||||||||||||| || |||||||| ||||    
T  43728399 catttgggttggtatggtggtattgacttatgatctgggagtgtgctcctcctcaaagtctcaggttcaattct-tccagtgtcaacttag 43728488  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 46545711 - 46545805
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||||||||||||| ||||  | ||  ||| |||||||||||  || |||||| ||| ||| |||||  |||||||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaatttag 46545805  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 9693527 - 9693482
Alignment:
Q  146 tgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||||    
T  9693527 tgctcctcctcaaggtctcaggttcgattccctctagtgtcaattt 9693482  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 13015444 - 13015521
Alignment:
Q  116 ctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||| ||||| |  | |||| ||||||||||| || |||||| |||| ||||||||  ||||||||||||    
T  13015444 ctagtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttag 13015521  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 21434810 - 21434839
Alignment:
Q  98 aaacccatttgggttggcctagtggtattg 127  Q
    ||||||||||||||||||||||||||||||    
T  21434810 aaacccatttgggttggcctagtggtattg 21434839  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 44195057 - 44194968
Alignment:
Q  102 ccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||| | ||||||||||  ||||||||| | || ||| | || ||  |||||||| |||||||||||||| ||| ||||||    
T  44195057 ccatttgggttggtccagtggtattggtttggaatctggaagtgtgtttcttctcaaggtctcatgttcaattctctctggtgccaattt 44194968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 51250599 - 51250546
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcc 151  Q
    ||||||| |||||||||||| ||||||||| ||||| |||| |||| |||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctcc 51250546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 52254459 - 52254390
Alignment:
Q  120 tggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaat 189  Q
    |||||||||||||| || |  ||| ||||||||||||||||| |||||||  |||||||| |||| ||||    
T  52254459 tggtattgacttgggatatgagagtgtgctcctccttgaggtttcaggttagattctctccagtgccaat 52254390  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 5795485 - 5795393
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||| || ||||| ||||||||| | || ||||  ||||||||||  ||||||||||||  |||||| | |||| ||||||    
T  5795485 aacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaattt 5795393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 24827824 - 24827896
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    ||||||| || |||||| |  ||||||||||||||| | || |||| | ||||||||| ||||||||||||||    
T  24827824 aaacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctcaggttc 24827896  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 23361725 - 23361631
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||| ||| ||||||||||||||| || | |||| |||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttag 23361631  T

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Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 16852339 - 16852434
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| |||||||||||||||||||||| ||||| | || |||| ||||||||||| |||||||||||||| ||||||  ||||| ||||||||    
T  16852339 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttag 16852434  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 19703564 - 19703472
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    ||||||| |||||||||||||||||||||| ||||| | ||  ||| |||||||||||  ||||||||||||| |||||| ||||||||||||    
T  19703564 aaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaatt 19703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 35690137 - 35690047
Alignment:
Q  102 ccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||| |||||||||||||||||| ||||| |||| || |  ||||||||||  ||||||||||||| ||||||||| |||||||||||    
T  35690137 ccatttgtgttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattta 35690047  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 6536538 - 6536614
Alignment:
Q  117 tagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||||| ||||| | ||||||| |||||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttag 6536614  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 11819776 - 11819868
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||| ||||||||||| | ||||| |  | |||| |||||||||||  ||||||||||||| |||| |||||||||||||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaattt 11819868  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 43594383 - 43594302
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| ||||| ||| | ||||||||  ||| |||||||  ||||||||||||| ||||||||||||||||||||    
T  43594383 gttggcctagtgatattggcttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaattt 43594302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 44780191 - 44780098
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||||||||||| |||| ||||| |  | |||| |||||||||||  ||||||||||||  |||| |||||||||||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaattt 44780098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 968362 - 968442
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||| ||| |||||||| ||||||||| ||||| | || |||| ||||||||||| |||||||||||||| ||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 2203494 - 2203570
Alignment:
Q  101 cccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  |||||||||| |||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctc 2203570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 5264543 - 5264611
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcag 166  Q
    ||||||| |||||||||||||||||||||| ||||||| || |||  ||||||||||| ||||||||||    
T  5264543 aaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 6569847 - 6569755
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| || ||||||||||||| ||||| ||||| |||| |||| |||||||||||| |||| ||| |||| ||||||| | ||||||||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaattt 6569755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 18540298 - 18540390
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| || || |||||  ||||||||||||| ||||||||| ||| ||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaattt 18540390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 26688865 - 26688957
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||| ||||| ||| ||||| | || |||| |||||||||||  |||||||||||||| ||||  |||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaattt 26688957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 27750730 - 27750822
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||| ||| ||||||| | ||||| |  | |||| |||||||||||  ||||||||||||| |||| |||||||||||||||    
T  27750730 aacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaattt 27750822  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 30483960 - 30483868
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||||| |||||||||| ||||| || | |||| |||||||||||    ||||||||||||||||||||| ||| ||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaattt 30483868  T

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Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 3624582 - 3624660
Alignment:
Q  101 cccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||| |||||||||||||||||||||| ||||| | || |||| ||||||||| |  ||||||||||||| ||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 12988427 - 12988520
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||| ||||||||||||||||| ||||||| || | || |||||||||||  |||| |||||||| || |||||| ||| ||||||    
T  12988427 aaacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaattt 12988520  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 7347887 - 7347931
Alignment:
Q  149 tcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  7347887 tcctccttgaggtttcaggttcaattctctcttgtgtcaatttag 7347931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 33017214 - 33017306
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||| ||  ||||| ||||||| || | || |||||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  33017214 aacccacttgggttggccttgtcatattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33017306  T

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Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 42740499 - 42740587
Alignment:
Q  104 atttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||||||| |||||||||||  |||| ||| | ||||  || || ||||  ||||||||||||||||||||||| |||||||||||    
T  42740499 atttgggttggtctagtggtattagcttgaaatttgggagtttgatcatcctcaaggtctcaggttcaattctctctggtgtcaattta 42740587  T

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Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 20994534 - 20994479
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctcc 154  Q
    |||||| |||||||||||||||||||||||||||| | || |||| ||||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctcc 20994479  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 29431011 - 29431090
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    |||||| |||||||||||| | ||||||| ||||| |  | |||| |||||||||||||||| ||||||||| |||||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctct 29431090  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 34986149 - 34986190
Alignment:
Q  151 ctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  34986149 ctccttgaggtctcaggttcaattctctccagtatcaattta 34986190  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 3826854 - 3826774
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    ||||||| |||||||||||||||||||||| ||||  || |  ||| ||||||||||  ||| |||||||||| |||||||    
T  3826854 aaacccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctccacgagatctcaggttcgattctct 3826774  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 8059632 - 8059724
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| ||||||||||||  |||||||||||||| || |  ||| ||| |||||||  ||||||||||||| |||||| ||  |||||||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaattt 8059724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 32157191 - 32157247
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctcct 155  Q
    ||||||||||||||||||| ||||||||||||||| | || ||||  ||||||||||    
T  32157191 aacccatttgggttggcctggtggtattgacttgggaccttggagtatgctcctcct 32157247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 33727949 - 33727857
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||| ||||||||||| |  |||  |  | | || |||||||||||  ||||||||||||| |||| |||||||||||||||    
T  33727949 aacccatttgggttgccctagtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaattt 33727857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 43969080 - 43968980
Alignment:
Q  93 taatcaaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    ||||| |||||| |||||||||| |  |||||||| |||||    |||||| |||||||||| ||||||||||| ||| ||| ||||| |||| ||||||    
T  43969080 taatcgaacccacttgggttggcatgatggtattggcttggggcttaggagtgtgctcctccctgaggtctcagattcgattatctctggtgttaattta 43968981  T
Q  193 g 193  Q
    |    
T  43968980 g 43968980  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 8484998 - 8485093
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| |||||||||||| ||||||||  ||||| | ||  ||| ||||||||| |||||||||||  ||| ||||||||  ||| ||||||||    
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttag 8485093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 8794419 - 8794340
Alignment:
Q  101 cccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||| |||| ||||| ||||||||||| ||||||| || | || |||||||||||   |||||||||||| |||||||||    
T  8794419 cccacttggattggcatagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctct 8794340  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 10287474 - 10287553
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||| |||| ||||||| || || |||||| |||| ||||| | || ||||| ||||| |||||||||||||||||||||    
T  10287474 aaactcattggggttggtctggtagtattggcttgaaatctggaagtgtgcttctcctcgaggtctcaggttcaattctc 10287553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 23874458 - 23874387
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||| |||||||||||||||||||||| ||||| | || |||   ||| |||||| ||||||||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggttc 23874387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 28750570 - 28750648
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||| | |||||||||| |||||||| ||||||||||| |||| | |||||||||| ||||||  ||||| ||||||    
T  28750570 aaacccactggggttggcctggtggtatt-acttggaatctgggagtgcgctcctccttaaggtcttcggttcgattctc 28750648  T

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Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 29858124 - 29858049
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattc 175  Q
    ||||| |||| ||||||| ||||||||| ||||| | |  |||| ||||||||||| |||||||||||||| ||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 40791925 - 40791878
Alignment:
Q  145 gtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||||||||||| |||| |||||| ||| |||||||||||||||||    
T  40791925 gtgctcctccttgaagtcttaggttcgattttctctagtgtcaattta 40791878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 4830486 - 4830560
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaa 172  Q
    ||||||| |||||||||||| ||||||||   |||| ||||  ||| ||| ||||||| ||||||||||||||||    
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttcaa 4830560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 42643321 - 42643231
Alignment:
Q  99 aacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| ||||||||||||  ||||||||| |||| ||||  |||||||||  |||||||||| ||| |||| |||||||| ||||||    
T  42643321 aacccatttggggttggcctagtgg--ttgacttgggatcttggagtttgctcctcc-agaggtctcagattcgattccctctagtgccaattt 42643231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 1157074 - 1157139
Alignment:
Q  114 gcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||| ||||||||||||||||| ||   || |||||||| ||||| |||||| |||||||||||||    
T  1157074 gcctcgtggtattgacttggaacctgaaagtgtgctccttcttgatgtctcaagttcaattctctc 1157139  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 31381374 - 31381434
Alignment:
Q  117 tagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||||||||||||||||||| | || |||||||||||   | |||||||||| |||||||||    
T  31381374 tagtggtattgacttggaatctggaagtgtgctcctcct---gatctcaggttcgattctctct 31381434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 35641978 - 35641897
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||| ||||||||| || ||||||| | ||||  || | |||| ||||||||||| || ||||||||||| ||||||||    
T  35641978 aaacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctc 35641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 18546428 - 18546360
Alignment:
Q  109 ggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| ||||||||||||| |||| | ||  |||  |||||||||| |||||||||||||| ||||||    
T  18546428 ggttggtctagtggtattgatttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctc 18546360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 25627057 - 25627149
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| |||||||  | |||| |||||||||||  ||||||||||||| ||||||||| ||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

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Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 43241751 - 43241679
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctct 178  Q
    ||||||||| |||||||||||||||||| |||| |||| |||| | |||||||||||||||||||||||||||    
T  43241751 ttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtctcaggttcaattctct 43241679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 29075781 - 29075875
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||| |||||||||||||| ||||| |||| |||| ||||||||||| ||| ||||| |||| ||||||||| ||| ||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttag 29075875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 34984804 - 34984898
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||| ||||||||| |||||||||||| ||||||| || |||| |||||||||||  |||||| |||||| ||||||||| ||| ||||||    
T  34984804 caaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaattt 34984898  T

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Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 87500 - 87408
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| || ||||||||||||||||||| |||||||||| |||| |||||||||||  ||||||||||||  |||| ||| |||||||||||    
T  87500 aaacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaattt 87408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14285160 - 14285253
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||||| ||||| |||| ||||||| || |||| |||||||||||  ||||||||||||| ||||||||| ||| ||||||    
T  14285160 aaacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 14285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 30700693 - 30700603
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    ||||||| || |||||||||||| ||||||||||| || ||  |||||||||||| ||| ||||||||||||||||| ||||| |||||||||    
T  30700693 aaacccacttaggttggcctagtcgtattgacttgtaacct--gagagtgctccttcttaaggtctcaggttcaattatctctggtgtcaatt 30700603  T

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Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 30883275 - 30883182
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||| |||||||||||| ||||| | || |||| |||||||||||  |||||||| ||||||||||| | |||||||||||    
T  30883275 aaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaattt 30883182  T

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Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 14495881 - 14495801
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||||||||||| || ||||||||||||||| |||| |||| ||||||||||| |||||||||| ||  ||||||||    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 14495801  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 21549213 - 21549121
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||| | |||||| |||| ||| ||||||||| ||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaattt 21549121  T

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Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 22020931 - 22020844
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||| ||||||||||  ||||| |||| |||| |||||||||||||| ||||||| ||| |||||||| ||||| |||||||    
T  22020931 ttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttag 22020844  T

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Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 6844729 - 6844823
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||  |||||||||||||||||| | |||| ||| ||||||| ||||||| |||||| ||| ||||| ||| ||||||||    
T  6844729 aacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaatttag 6844823  T

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Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 16773807 - 16773901
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||| ||||| || ||||||||||||||| | || |||| ||||||||||| |||||||||||||| |||||||||  || ||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttag 16773901  T

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Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 43230852 - 43230756
Alignment:
Q  99 aacccatttgggttggcctagtggtat--tgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||||||||||||||  || |||||  |||  ||| |||||||||||| || |||||| ||||||||||||| ||||||||||||    
T  43230852 aacccacttgggttggcctagtggtatattggcttgggttctgagagtgtgctcctccttaagatctcagattcaattctctcttgtgtcaatttag 43230756  T

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Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 7918545 - 7918453
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||||| || |||| |  ||||||||  |||||| |||||| ||||||||| ||| ||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaattt 7918453  T

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Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 19043458 - 19043550
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||| |||||||||||||  | |||| ||| |||| ||  | |||||||||||||| |||||||||| ||||||    
T  19043458 aacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttcaatcctctctagtgccaattt 19043550  T

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Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 37258429 - 37258350
Alignment:
Q  112 tggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||| ||||||||||  ||||| ||||||||| |||||||||||  |||| |||||||| ||||||||| ||||||||||    
T  37258429 tggcttagtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaattt 37258350  T

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Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 892550 - 892476
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaat 173  Q
    ||||||||||||||||||||||||||||| ||||| | ||  ||| || ||||||||  ||||||||||||||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggttcaat 892476  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 29692464 - 29692382
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||||||||||||||| || |||||||||  |||| |||| |||| |||||||||||  | |||||||||| |||||||||    
T  29692464 caaacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctc 29692382  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 30109385 - 30109308
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattc 175  Q
    ||||||| |||||||||| | ||||||||| ||||  | || |||| |||||||||||||||||||||||||| ||||    
T  30109385 aaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 1410728 - 1410645
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    ||||||||| || ||||||||||||||| || | |||| ||||||||||| ||||||||| |||| ||||||| | |||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctca-gttcgattctctgtggtgtcaatt 1410645  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 5390926 - 5390857
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    ||||||||||||||||||||||||||||| |||||   || || ||||||||||||| ||||||||||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttgg-ggcttgg-gagtgctcctcctcgaggtctcaggttc 5390857  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 16457810 - 16457888
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||| || ||||||||| ||||||||| ||||| | || |||| |||||||||||  |||||||| |||||||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctc 16457888  T

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Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 17028340 - 17028246
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||| |||||| ||||||  |||| |  | |||| |||||||||||  ||||||||||||  |||| |||||||||||||||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttag 17028246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 21589288 - 21589382
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||| ||||||||| ||||| | || ||||  |||| ||||| || ||||||||||| |||| |||| ||| ||||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttag 21589382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 12883871 - 12883920
Alignment:
Q  130 ttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||| |||| |||| ||||||||||||||||||||| |||||||||||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttcaattctctc 12883920  T

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Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 41730549 - 41730634
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||| ||||||  | |||| ||||||| |||  |||| ||| |||| ||||||||| |||| |||||    
T  41730549 ttgggttggcctagtggtattgagttggaacattggagtgtgctccacctcaaggtatcatgttcgattctctctcgtgttaattt 41730634  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 43442207 - 43442288
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||  |||  |||| |||| |||||||||||  ||||||||||||| |||||||||  |||||||||    
T  43442207 gttggcatagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaattt 43442288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 29173529 - 29173584
Alignment:
Q  138 taggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||||| ||||| |||||||| ||| ||||| ||||||||||||    
T  29173529 taggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttag 29173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 29210397 - 29210452
Alignment:
Q  138 taggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||||| ||||| ||| |||||||||||||| || |||||||||    
T  29210397 taggagtgtgctcctcctcgaggtttcaagttcaattctctctggtatcaatttag 29210452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 3252365 - 3252332
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttg 132  Q
    |||||| |||||||||||||||||||||||||||    
T  3252365 aacccacttgggttggcctagtggtattgacttg 3252332  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 19949684 - 19949600
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||| | | ||||||||||||||  |||||| || ||||||||||| ||| |||||||||||||| || |  ||||||||||    
T  19949684 ttgggttgacttggtggtattgacttgagatctag-agtgtgctcctcctcgagctctcaggttcaattttcaccggtgtcaattt 19949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 33709703 - 33709614
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||||||||||  ||| ||||| |||| ||||  |||||||||  ||||||||| |||| |||| |||| ||| ||||||    
T  33709703 aacccatttgggttggcctagtgg--ttggcttgggatcttggagtttgctcctcc-agaggtctcaagttcgattccctctggtgccaattt 33709614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 16436625 - 16436688
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttc 170  Q
    |||||||||||||||||||||| ||||| | || |||| |||||||||||  |||||||| ||||    
T  16436625 ttgggttggcctagtggtattggcttggga-cttggagtgtgctcctcctcaaggtctcatgttc 16436688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 18437095 - 18437179
Alignment:
Q  109 ggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||||||||| |||||| |  |  ||| |||||||||||  | || || ||||| ||||||||||||| ||||||||    
T  18437095 ggttggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaatttag 18437179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 25979194 - 25979262
Alignment:
Q  123 tattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| |||||||| | |||| || ||||||||  ||||||||||||| |||||||||  |||||||||    
T  25979194 tattggcttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctctcttatgtcaattt 25979262  T

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Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 95040 - 94954
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||||||||||||||||||| ||||||| || |||| |||||||||||  ||||||||||||||||| ||||| ||| |||||||    
T  95040 ttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattta 94954  T

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Target: scaffold0118 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 41709 - 41617
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||||||||||||| ||||  ||||  |||  |||||||||| ||||||||||||||||||||||||  |||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaattt 41617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 12234584 - 12234489
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||| || ||||||||| ||||||||||||||| | || |||| |||||||  || |||||||||||||| |||||||| |||||||||||||    
T  12234584 aaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttag 12234489  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 12188381 - 12188287
Alignment:
Q  97 caaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||| |||||||||||||||||||||| ||||| | || |||| |||||||||||  |||| ||| |||| ||||||||||||| ||||||    
T  12188381 caaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaattt 12188287  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 3715452 - 3715546
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||||||| |||||| |||||||||||||||||  |||| ||||  |||| ||| | ||||||||| |||| |||||||| |||||||||||||    
T  3715452 aacccattttggttgggctagtggtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaatttag 3715546  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 24641266 - 24641188
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    ||||||||||||||||| | ||||||||||||||| |||| |||| ||||||||||| ||||| | |||||| ||||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctc 24641188  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 33549103 - 33549184
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||| ||||||||| || ||||||||| ||||| | || |||| ||||||||||| |||||||||||||| ||||||||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 24507613 - 24507518
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| ||||||||||||||||||||| ||| ||||| | || ||||  ||||||||||  ||||||  ||||||||||||||  || |||||||||    
T  24507613 aaactcatttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttag 24507518  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 32613214 - 32613123
Alignment:
Q  101 cccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||| |||||||||||| |||||||||||||||  ||| |||| |||||||| ||  || ||||| |||| |||||||  ||||||||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctcttcagtgtcaattta 32613123  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 10338243 - 10338161
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaa 188  Q
    |||||||||| | ||||||||| ||||| | ||||||| |||||||||||  ||||||||||||| |||| | | ||||||||    
T  10338243 ttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattccccccagtgtcaa 10338161  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 30127400 - 30127494
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||||||| || ||||||||| |||||  ||| |||| ||||||||| | |||||||||||||| ||||| ||  ||| ||||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttag 30127494  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 6758497 - 6758404
Alignment:
Q  100 acccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    ||||| ||| |||||||| ||||||||| ||| | || | |||| ||||||| ||| ||||||||| | || ||||||||| ||||||||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttag 6758404  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 6776676 - 6776591
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| ||||||||| ||||| |||| || | ||||||||||| || |||||| |||  ||||||||| || |||||||    
T  6776676 ttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctggtttcaattt 6776591  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 11423573 - 11423658
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| ||| || ||||||||||||||| || | ||||  |||| ||||| |||||||||||||| ||| |||| |||||||||||    
T  11423573 ttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctccagtgtcaattt 11423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 13330086 - 13330179
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| |||||||| ||||||||||||||||| |||  | ||||   |||||||||  ||||||||| ||| ||||||||| ||| ||||||    
T  13330086 aaacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaattt 13330179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 4105075 - 4105143
Alignment:
Q  123 tattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| |||| || ||||||| |||||||||||| || |||||||||| ||| ||||| ||||||||||    
T  4105075 tattggcttgaaacctaggagtgtgctcctccttaagatctcaggttcgattttctctggtgtcaattt 4105143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 6385882 - 6385942
Alignment:
Q  119 gtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||||||||||| | || |||  |||||||||||| ||||||||||||| ||||||||    
T  6385882 gtggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctc 6385942  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 21418470 - 21418561
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatt 190  Q
    |||||| |||||||||||| ||||||||| ||||| |  | |||| |||||||||||  | |||||| |||| |||||| |||||| |||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaatt 21418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 31623068 - 31622997
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggtt 169  Q
    ||||||| ||||||||| |  ||||||||| ||||| | || |||| ||||||||||| |||||||||||||    
T  31623068 aaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 34444810 - 34444881
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||||||||| ||||||||||||||| | ||  ||| ||||||||||   ||||||||||||| ||||||    
T  34444810 ttgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctc 34444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 13753234 - 13753324
Alignment:
Q  99 aacccatttggg-ttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||| |||||||||||||  || ||| | |||| ||||  |||||||||  |||||||||||||||||||||||| ||| ||||||    
T  13753234 aacccatttggggttggcctagtggt--tggctttggatcttggagtttgctcctcca-gaggtctcaggttcaattctctctggtgccaattt 13753324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 4603079 - 4603046
Alignment:
Q  158 aggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||||||| |||||||||||||    
T  4603079 aggtctcaggttcaattctccctagtgtcaattt 4603046  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 12633009 - 12633102
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||| |||||||| ||  ||| ||||||||||| || | |||| ||||||||| | ||| ||||| |||| |||||||| | ||||||||||    
T  12633009 aacccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaattta 12633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 28363948 - 28364029
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||| |||||||||||  |||| ||||  ||| |||||||||||  ||||||||| ||| ||| ||||| ||||||||||    
T  28363948 gttggcatagtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaattt 28364029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 3925744 - 3925836
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||| |||||  ||||||||||||  |||||||||  ||| ||| |||| ||  | ||||||| ||||||||||||| || |||||||    
T  3925744 aacccatttaggttgaactagtggtattggtttggaatctgagagtgtgttccttctcaaagtctcagattcaattctctctggtatcaattt 3925836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 11448875 - 11448955
Alignment:
Q  108 gggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||||||||||||  || ||||| |||| ||||  |||||||||  |||||||||||||| ||||||||| ||| ||||||    
T  11448875 gggttggcctagtggt--tggcttgggatcttggagtttgctcctcca-gaggtctcaggttcgattctctctggtgccaattt 11448955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 14278139 - 14278095
Alignment:
Q  147 gctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||| ||||||||||||  ||||||||| ||||||||||    
T  14278139 gctcctccttaaggtctcaggtttgattctctctggtgtcaattt 14278095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 20213057 - 20213133
Alignment:
Q  115 cctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||   ||||| | || |||| |||||||||||  | ||||||||||| |||| |||||||||||||||    
T  20213057 cctagtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaattt 20213133  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 22107080 - 22107156
Alignment:
Q  115 cctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||   ||||| | || |||| |||||||||||  | ||||||||||| |||| |||||||||||||||    
T  22107080 cctagtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaattt 22107156  T

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Target: scaffold0299 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 11535 - 11620
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||| |||||| ||||||||| ||||| |||| |||| ||||||||||| |||||||||||||| ||||||||| |||| |||||    
T  11535 ttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaattt 11620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 42596 - 42503
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattta 192  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||    ||||||||||| ||||||| | ||| |||||||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgattctctttggtgccaattta 42503  T

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Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 112282 - 112376
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| |||||||||||| || |||||| |||||||||| |||| ||| ||||| ||||||||| |||||| ||||||||  ||| ||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttag 112376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 20027 - 19946
Alignment:
Q  110 gttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    |||||||||||||||||| ||||||| || ||||  ||||||||||  ||||||||||||| ||||||||| |||| |||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaattt 19946  T

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Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 15399 - 15319
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||| ||||||||| || ||||||||| ||||| | || |||| ||||||||||| |||||||||||||| ||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

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Target: scaffold0074 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 45812 - 45741
Alignment:
Q  122 gtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||| ||||| | ||||||| ||| ||||||||||||||||| |||| ||||||||| ||||||||||||    
T  45812 gtattgccttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaatttag 45741  T

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Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 909 - 832
Alignment:
Q  106 ttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagt 183  Q
    ||||| |||||| ||||||||| ||||| |||| |||  ||||||||||| || ||||||||||| ||||||||||||    
T  909 ttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctctagt 832  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 92968 - 93024
Alignment:
Q  120 tggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattct 176  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||| |||||| |||||    
T  92968 tggtattgacttggaatctgggagtgtgatcctccttgaggtctgaggttcgattct 93024  T

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Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 1752 - 1847
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| ||||||||||||||||||||| ||| ||||| | || ||||  ||||||||||  ||||||  ||||||||||||||  || |||||||||    
T  1752 aaactcatttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttag 1847  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 12188 - 12283
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||| ||||||||||||||||||||| ||| ||||| | || ||||  ||||||||||  |||||| | ||| |||||||||| || |||||||||    
T  12188 aaactcatttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctaaagttaaattctctctggtatcaatttag 12283  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 24053 - 24134
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| ||||||||||||| |||||||||||||| |  |||||| ||||||||| | || || |||||||| ||| |||||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctct 24134  T

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Target: scaffold0300 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 4348 - 4432
Alignment:
Q  107 tgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaattt 191  Q
    ||||||| ||||||||||| | ||||| || | |||| |||||||| ||| |||| | |||||| |||| |||||||||||||||    
T  4348 tgggttgccctagtggtataggcttgggatttgggagtgtgctccttcttaaggttttaggttcgattccctctagtgtcaattt 4432  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 2546 - 2468
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctc 177  Q
    |||||||||||||||| |  |||||||||  || | |||| |||| |||||||||||  ||||||||||||| ||||||    
T  2546 aacccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 13112 - 13042
Alignment:
Q  109 ggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    ||||||| | ||||||||| ||||  |||| |||| |||||||||||  ||||||||||||| ||||||||    
T  13112 ggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 163081 - 162991
Alignment:
Q  103 catttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctctagtgtcaatttag 193  Q
    |||||||||||| |||||||| |||||||   | ||  ||| |||||||||| | |||||| |||||| ||||||||  ||||||||||||    
T  163081 catttgggttggtctagtggttttgacttatgacctgagagtgtgctcctccataaggtctgaggttcgattctctccggtgtcaatttag 162991  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 10853 - 10812
Alignment:
Q  138 taggagagtgctcctccttgaggtctcaggttcaattctctc 179  Q
    |||||| |||||||||||| ||||||||||||||||| ||||    
T  10853 taggagtgtgctcctccttcaggtctcaggttcaattatctc 10812  T

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Target: scaffold0187 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 12498 - 12465
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttg 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  12498 aacccatttgggttggcctggtggtattgacttg 12465  T

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Target: scaffold0187; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 22826 - 22793
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttg 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  22826 aacccatttgggttggcctggtggtattgacttg 22793  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 35465 - 35384
Alignment:
Q  99 aacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattctctct 180  Q
    |||||| || |||| ||| |||||||||| |||||||||||||||  ||||||||||  |||||| | |||| ||| |||||    
T  35465 aacccacttcggtttgcccagtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctct 35384  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 91124 - 91197
Alignment:
Q  98 aaacccatttgggttggcctagtggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttca 171  Q
    ||||||| |||||||| ||||||||||| |  || |||||| | || ||||| |||||| ||||||||||||||    
T  91124 aaacccacttgggttgacctagtggtataggtttcgaatctggaagtgtgcttctccttaaggtctcaggttca 91197  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 19902 - 19846
Alignment:
Q  120 tggtattgacttggaatctaggagagtgctcctccttgaggtctcaggttcaattct 176  Q
    |||||||| ||||| |||| ||||  |||||||||||||||||||| |||| |||||    
T  19902 tggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

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