View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928_high_13 (Length: 443)

Name: NF4928_high_13
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928_high_13
NF4928_high_13
[»] chr3 (44 HSPs)
chr3 (185-328)||(55146954-55147097)
chr3 (203-328)||(30716286-30716411)
chr3 (18-120)||(55146789-55146891)
chr3 (18-119)||(30716101-30716202)
chr3 (18-120)||(48161715-48161817)
chr3 (28-120)||(18946279-18946371)
chr3 (185-320)||(183357-183492)
chr3 (324-433)||(30152404-30152514)
chr3 (324-433)||(51158689-51158799)
chr3 (187-315)||(48161882-48162010)
chr3 (327-433)||(27840413-27840520)
chr3 (324-433)||(14528670-14528780)
chr3 (324-427)||(16934856-16934960)
chr3 (28-120)||(45031707-45031799)
chr3 (324-433)||(8276519-8276629)
chr3 (324-433)||(17956874-17956984)
chr3 (324-433)||(28557324-28557434)
chr3 (324-433)||(49231722-49231832)
chr3 (324-433)||(54039172-54039282)
chr3 (324-433)||(8269408-8269518)
chr3 (324-433)||(25058252-25058362)
chr3 (337-433)||(44228470-44228567)
chr3 (187-299)||(18946092-18946204)
chr3 (324-433)||(1468659-1468769)
chr3 (324-433)||(16820416-16820526)
chr3 (327-433)||(12265468-12265575)
chr3 (357-433)||(12808459-12808536)
chr3 (27-116)||(37222546-37222635)
chr3 (27-112)||(47867779-47867864)
chr3 (253-328)||(18895610-18895685)
chr3 (46-116)||(4950648-4950717)
chr3 (48-116)||(53562248-53562315)
chr3 (187-282)||(45031863-45031958)
chr3 (327-433)||(18897675-18897782)
chr3 (324-388)||(6468920-6468984)
chr3 (324-388)||(7781132-7781196)
chr3 (324-388)||(10247509-10247573)
chr3 (324-388)||(12567872-12567936)
chr3 (324-388)||(15977845-15977909)
chr3 (324-388)||(20629977-20630041)
chr3 (324-388)||(27165565-27165629)
chr3 (324-388)||(29544627-29544691)
chr3 (324-388)||(46822574-46822638)
chr3 (324-388)||(54521135-54521199)
[»] chr5 (43 HSPs)
chr5 (185-324)||(19870859-19870997)
chr5 (18-119)||(19870694-19870795)
chr5 (324-433)||(27183214-27183324)
chr5 (187-328)||(9041934-9042075)
chr5 (324-433)||(35791770-35791880)
chr5 (324-433)||(43444054-43444164)
chr5 (326-433)||(23506457-23506565)
chr5 (324-433)||(10778837-10778947)
chr5 (324-433)||(11212739-11212849)
chr5 (324-433)||(11342144-11342254)
chr5 (324-433)||(22883949-22884059)
chr5 (324-433)||(23511081-23511191)
chr5 (324-433)||(1168837-1168947)
chr5 (324-433)||(1220389-1220499)
chr5 (324-428)||(11862-11967)
chr5 (324-428)||(21074254-21074359)
chr5 (324-428)||(22367140-22367245)
chr5 (324-428)||(25426136-25426241)
chr5 (324-427)||(7424837-7424941)
chr5 (326-433)||(18778653-18778761)
chr5 (324-433)||(32950167-32950277)
chr5 (324-428)||(19499387-19499492)
chr5 (20-116)||(10826807-10826903)
chr5 (324-433)||(35581294-35581404)
chr5 (324-433)||(36990684-36990794)
chr5 (27-116)||(7250281-7250370)
chr5 (324-433)||(21933288-21933398)
chr5 (324-433)||(21939458-21939568)
chr5 (28-116)||(42449759-42449847)
chr5 (57-120)||(9042150-9042213)
chr5 (327-427)||(23328035-23328136)
chr5 (18-66)||(9042232-9042280)
chr5 (42-116)||(23062445-23062518)
chr5 (253-328)||(23062654-23062729)
chr5 (279-328)||(10826595-10826644)
chr5 (279-328)||(42449549-42449598)
chr5 (324-388)||(39363697-39363761)
chr5 (324-388)||(296060-296124)
chr5 (324-388)||(2154417-2154481)
chr5 (327-395)||(24615680-24615748)
chr5 (327-395)||(24712078-24712146)
chr5 (327-395)||(24745074-24745142)
chr5 (324-388)||(29346292-29346356)
[»] chr4 (38 HSPs)
chr4 (185-328)||(39390433-39390576)
chr4 (18-120)||(39390637-39390739)
chr4 (324-433)||(14951224-14951334)
chr4 (324-433)||(55377231-55377341)
chr4 (324-433)||(25120080-25120190)
chr4 (326-433)||(18293703-18293811)
chr4 (324-427)||(43281731-43281835)
chr4 (324-433)||(5683401-5683511)
chr4 (324-433)||(18247693-18247803)
chr4 (324-433)||(22355105-22355215)
chr4 (30-120)||(55741193-55741283)
chr4 (325-433)||(8373994-8374103)
chr4 (328-433)||(16731630-16731736)
chr4 (324-433)||(17146325-17146435)
chr4 (324-433)||(18168247-18168357)
chr4 (336-433)||(19698030-19698128)
chr4 (336-433)||(19708615-19708713)
chr4 (324-433)||(47357137-47357247)
chr4 (324-428)||(10643705-10643810)
chr4 (187-320)||(55740995-55741128)
chr4 (324-427)||(15295014-15295118)
chr4 (324-433)||(14995598-14995708)
chr4 (324-427)||(15287904-15288008)
chr4 (27-116)||(12028095-12028184)
chr4 (324-434)||(19019962-19020073)
chr4 (20-116)||(31302491-31302586)
chr4 (253-328)||(54603734-54603809)
chr4 (327-427)||(26338500-26338602)
chr4 (46-116)||(54603945-54604014)
chr4 (324-400)||(14970492-14970568)
chr4 (324-388)||(19857891-19857955)
chr4 (327-433)||(22737743-22737850)
chr4 (279-328)||(12027884-12027933)
chr4 (324-401)||(49547559-49547636)
chr4 (324-388)||(3515320-3515384)
chr4 (362-402)||(9610862-9610902)
chr4 (324-388)||(15534494-15534558)
chr4 (324-388)||(52872858-52872922)
[»] chr2 (35 HSPs)
chr2 (185-328)||(40614273-40614416)
chr2 (324-433)||(27261286-27261396)
chr2 (326-433)||(67293-67401)
chr2 (18-120)||(40614479-40614581)
chr2 (27-120)||(19508050-19508143)
chr2 (324-433)||(16900769-16900879)
chr2 (324-433)||(16994160-16994270)
chr2 (324-433)||(24686643-24686753)
chr2 (324-433)||(34823704-34823814)
chr2 (324-428)||(19887320-19887425)
chr2 (249-328)||(29899567-29899646)
chr2 (187-328)||(21831429-21831570)
chr2 (27-116)||(26170638-26170727)
chr2 (324-433)||(12727664-12727775)
chr2 (324-433)||(11232258-11232368)
chr2 (324-433)||(22514105-22514215)
chr2 (324-433)||(28776707-28776817)
chr2 (337-433)||(5889313-5889411)
chr2 (337-433)||(21141381-21141478)
chr2 (324-428)||(22273981-22274086)
chr2 (20-116)||(29899370-29899466)
chr2 (324-428)||(22283214-22283319)
chr2 (46-113)||(34457205-34457271)
chr2 (253-328)||(31508991-31509066)
chr2 (327-427)||(23773615-23773717)
chr2 (357-405)||(15855450-15855498)
chr2 (46-116)||(2121032-2121101)
chr2 (253-314)||(34457412-34457473)
chr2 (324-400)||(21154793-21154869)
chr2 (324-388)||(22105778-22105842)
chr2 (324-388)||(32214716-32214780)
chr2 (187-316)||(19508208-19508338)
chr2 (254-316)||(26170865-26170927)
chr2 (324-401)||(45027690-45027767)
chr2 (324-388)||(20261532-20261596)
[»] chr6 (37 HSPs)
chr6 (185-328)||(5614213-5614355)
chr6 (18-120)||(5614036-5614138)
chr6 (187-328)||(1259600-1259741)
chr6 (185-316)||(19273255-19273386)
chr6 (18-120)||(1259816-1259918)
chr6 (324-433)||(19984164-19984274)
chr6 (324-433)||(35016049-35016159)
chr6 (324-433)||(16633546-16633656)
chr6 (324-433)||(16650220-16650330)
chr6 (324-428)||(16240255-16240360)
chr6 (324-433)||(22226614-22226725)
chr6 (324-433)||(1555481-1555591)
chr6 (324-433)||(16826413-16826523)
chr6 (324-427)||(25904434-25904539)
chr6 (324-427)||(19609540-19609644)
chr6 (337-433)||(23152989-23153086)
chr6 (324-428)||(27654642-27654747)
chr6 (324-422)||(16556990-16557089)
chr6 (324-433)||(22593627-22593737)
chr6 (324-428)||(21776141-21776246)
chr6 (324-433)||(10487925-10488035)
chr6 (324-433)||(16377293-16377403)
chr6 (324-433)||(16384617-16384727)
chr6 (324-433)||(33315121-33315231)
chr6 (324-428)||(25175071-25175176)
chr6 (19-95)||(19273476-19273552)
chr6 (351-427)||(29870474-29870551)
chr6 (327-433)||(19628837-19628944)
chr6 (324-394)||(34963680-34963750)
chr6 (324-400)||(22782527-22782603)
chr6 (324-388)||(25535720-25535784)
chr6 (324-388)||(26924426-26924490)
chr6 (324-388)||(30676495-30676559)
chr6 (324-388)||(17377633-17377697)
chr6 (324-388)||(19005464-19005528)
chr6 (361-405)||(23225154-23225198)
chr6 (324-388)||(28289122-28289186)
[»] chr7 (45 HSPs)
chr7 (185-328)||(41958108-41958251)
chr7 (18-120)||(46529240-46529342)
chr7 (324-433)||(125919-126029)
chr7 (324-433)||(11286930-11287040)
chr7 (187-320)||(46529032-46529165)
chr7 (42-120)||(3938708-3938786)
chr7 (324-433)||(15760784-15760894)
chr7 (324-433)||(10001030-10001140)
chr7 (325-433)||(32495097-32495206)
chr7 (185-328)||(13953002-13953145)
chr7 (324-433)||(15951639-15951749)
chr7 (325-433)||(1937833-1937942)
chr7 (325-433)||(15851930-15852039)
chr7 (191-299)||(1804622-1804730)
chr7 (324-433)||(7821967-7822077)
chr7 (324-433)||(7829278-7829388)
chr7 (324-433)||(27102557-27102667)
chr7 (324-433)||(27109905-27110015)
chr7 (324-433)||(27175659-27175769)
chr7 (324-433)||(38784649-38784759)
chr7 (337-428)||(16417977-16418070)
chr7 (28-120)||(13953208-13953300)
chr7 (66-116)||(1804814-1804864)
chr7 (46-116)||(31592603-31592672)
chr7 (256-316)||(3938920-3938980)
chr7 (185-313)||(28510321-28510449)
chr7 (253-328)||(31592809-31592884)
chr7 (46-116)||(17733817-17733886)
chr7 (66-116)||(41957980-41958030)
chr7 (253-328)||(17733605-17733680)
chr7 (46-96)||(2393260-2393310)
chr7 (326-388)||(8469048-8469110)
chr7 (250-328)||(45414717-45414795)
chr7 (46-94)||(11409457-11409505)
chr7 (324-388)||(15081627-15081691)
chr7 (324-387)||(14156671-14156734)
chr7 (49-120)||(28510512-28510583)
chr7 (69-116)||(45414538-45414584)
chr7 (342-392)||(16108492-16108542)
chr7 (324-388)||(8940592-8940656)
chr7 (324-384)||(16214001-16214061)
chr7 (324-388)||(24702541-24702605)
chr7 (324-388)||(24704988-24705052)
chr7 (324-388)||(29796923-29796987)
chr7 (324-388)||(29800742-29800806)
[»] scaffold0396 (1 HSPs)
scaffold0396 (324-433)||(12526-12636)
[»] scaffold0107 (1 HSPs)
scaffold0107 (324-433)||(30424-30534)
[»] scaffold0034 (3 HSPs)
scaffold0034 (324-433)||(45402-45512)
scaffold0034 (324-433)||(39919-40029)
scaffold0034 (324-433)||(78957-79067)
[»] chr8 (41 HSPs)
chr8 (324-433)||(15320034-15320144)
chr8 (324-433)||(15500403-15500513)
chr8 (324-433)||(29759383-29759493)
chr8 (326-433)||(24717758-24717866)
chr8 (324-433)||(13663134-13663244)
chr8 (324-433)||(17150661-17150771)
chr8 (324-433)||(22089418-22089528)
chr8 (336-433)||(22146931-22147029)
chr8 (324-433)||(223350-223460)
chr8 (324-433)||(736973-737083)
chr8 (324-433)||(860868-860978)
chr8 (336-433)||(18611906-18612004)
chr8 (324-433)||(22007131-22007241)
chr8 (324-428)||(688121-688226)
chr8 (326-433)||(39114369-39114477)
chr8 (324-433)||(272209-272319)
chr8 (324-433)||(643530-643640)
chr8 (324-433)||(829336-829446)
chr8 (324-433)||(18618784-18618894)
chr8 (27-116)||(1550818-1550906)
chr8 (357-433)||(699796-699873)
chr8 (20-116)||(44119153-44119249)
chr8 (268-328)||(8319142-8319202)
chr8 (54-116)||(23877952-23878014)
chr8 (222-316)||(23718255-23718349)
chr8 (253-328)||(20495069-20495144)
chr8 (46-116)||(20495281-20495350)
chr8 (324-388)||(14397526-14397590)
chr8 (250-314)||(21551296-21551360)
chr8 (250-314)||(21552342-21552406)
chr8 (324-388)||(24048923-24048987)
chr8 (64-116)||(42100498-42100549)
chr8 (282-326)||(44118955-44118999)
chr8 (253-312)||(42100301-42100360)
chr8 (46-116)||(23718453-23718522)
chr8 (324-388)||(15202771-15202835)
chr8 (324-388)||(15202964-15203028)
chr8 (324-388)||(19896827-19896891)
chr8 (324-388)||(22002065-22002129)
chr8 (324-388)||(32122041-32122105)
chr8 (324-388)||(45290427-45290491)
[»] scaffold1164 (1 HSPs)
scaffold1164 (324-428)||(869-974)
[»] scaffold0338 (1 HSPs)
scaffold0338 (324-433)||(8520-8630)
[»] scaffold0335 (1 HSPs)
scaffold0335 (324-433)||(6241-6351)
[»] scaffold0184 (3 HSPs)
scaffold0184 (324-433)||(32152-32262)
scaffold0184 (254-328)||(28183-28257)
scaffold0184 (46-116)||(28395-28464)
[»] scaffold0078 (3 HSPs)
scaffold0078 (324-433)||(40582-40692)
scaffold0078 (46-116)||(44380-44449)
scaffold0078 (254-328)||(44587-44661)
[»] chr1 (31 HSPs)
chr1 (324-433)||(21858546-21858656)
chr1 (324-433)||(44035864-44035975)
chr1 (324-433)||(22366481-22366591)
chr1 (324-433)||(18060620-18060730)
chr1 (337-433)||(7641618-7641715)
chr1 (326-433)||(15862088-15862196)
chr1 (324-427)||(21650915-21651019)
chr1 (20-116)||(31385552-31385648)
chr1 (324-433)||(17003863-17003973)
chr1 (20-116)||(42465085-42465181)
chr1 (326-427)||(22029775-22029877)
chr1 (253-328)||(15292326-15292401)
chr1 (327-433)||(20253812-20253919)
chr1 (253-328)||(42464873-42464948)
chr1 (46-116)||(46200924-46200993)
chr1 (253-325)||(18239915-18239987)
chr1 (253-328)||(42058172-42058247)
chr1 (50-116)||(13706360-13706425)
chr1 (327-427)||(22034926-22035028)
chr1 (381-433)||(22249665-22249718)
chr1 (20-116)||(15292537-15292632)
chr1 (357-401)||(38056031-38056075)
chr1 (253-320)||(31385785-31385852)
chr1 (20-111)||(42058388-42058478)
chr1 (20-81)||(27108852-27108913)
chr1 (324-388)||(27161372-27161436)
chr1 (324-392)||(29535360-29535428)
chr1 (253-328)||(46200712-46200787)
chr1 (324-392)||(13227172-13227240)
chr1 (324-388)||(21841079-21841143)
chr1 (324-388)||(31612871-31612935)
[»] scaffold0269 (1 HSPs)
scaffold0269 (326-433)||(15732-15840)
[»] scaffold0383 (1 HSPs)
scaffold0383 (336-433)||(1913-2011)
[»] scaffold0266 (1 HSPs)
scaffold0266 (324-433)||(679-789)
[»] scaffold0035 (2 HSPs)
scaffold0035 (324-433)||(110110-110220)
scaffold0035 (324-433)||(118611-118721)
[»] scaffold0342 (1 HSPs)
scaffold0342 (324-428)||(1301-1406)
[»] scaffold0213 (1 HSPs)
scaffold0213 (326-433)||(28423-28531)
[»] scaffold0106 (1 HSPs)
scaffold0106 (326-433)||(41211-41319)
[»] scaffold0023 (2 HSPs)
scaffold0023 (324-427)||(154897-155001)
scaffold0023 (324-388)||(17225-17289)
[»] scaffold1753 (1 HSPs)
scaffold1753 (324-433)||(822-932)
[»] scaffold1404 (1 HSPs)
scaffold1404 (324-433)||(1329-1439)
[»] scaffold0039 (1 HSPs)
scaffold0039 (324-433)||(19945-20055)
[»] scaffold0191 (1 HSPs)
scaffold0191 (328-428)||(8132-8233)
[»] scaffold0044 (1 HSPs)
scaffold0044 (324-427)||(37820-37923)
[»] scaffold0315 (1 HSPs)
scaffold0315 (324-433)||(18159-18269)
[»] scaffold0916 (1 HSPs)
scaffold0916 (187-328)||(623-763)
[»] scaffold0076 (1 HSPs)
scaffold0076 (324-433)||(38329-38439)
[»] scaffold0066 (1 HSPs)
scaffold0066 (325-417)||(53916-54009)
[»] scaffold0013 (2 HSPs)
scaffold0013 (187-316)||(86463-86591)
scaffold0013 (18-116)||(86660-86763)
[»] scaffold0003 (1 HSPs)
scaffold0003 (337-428)||(6689-6782)
[»] scaffold0183 (1 HSPs)
scaffold0183 (351-427)||(6076-6153)
[»] scaffold0016 (1 HSPs)
scaffold0016 (358-433)||(167168-167243)
[»] scaffold0467 (1 HSPs)
scaffold0467 (327-433)||(11015-11122)
[»] scaffold0020 (1 HSPs)
scaffold0020 (201-315)||(140467-140581)
[»] scaffold0686 (1 HSPs)
scaffold0686 (324-395)||(6975-7046)
[»] scaffold1813 (1 HSPs)
scaffold1813 (42-116)||(605-678)
[»] scaffold0251 (2 HSPs)
scaffold0251 (46-116)||(1803-1872)
scaffold0251 (279-320)||(1599-1640)
[»] scaffold0761 (1 HSPs)
scaffold0761 (327-433)||(2272-2379)
[»] scaffold0012 (1 HSPs)
scaffold0012 (357-428)||(34802-34876)
[»] scaffold0001 (1 HSPs)
scaffold0001 (324-388)||(501378-501442)
[»] scaffold0747 (1 HSPs)
scaffold0747 (324-401)||(889-966)
[»] scaffold1792 (1 HSPs)
scaffold1792 (324-388)||(520-584)
[»] scaffold0741 (1 HSPs)
scaffold0741 (324-400)||(4088-4164)
[»] scaffold0230 (1 HSPs)
scaffold0230 (324-388)||(23316-23380)
[»] scaffold0014 (1 HSPs)
scaffold0014 (326-389)||(113328-113391)
[»] scaffold0574 (1 HSPs)
scaffold0574 (324-401)||(6751-6828)
[»] scaffold1427 (1 HSPs)
scaffold1427 (324-388)||(1741-1805)
[»] scaffold0494 (1 HSPs)
scaffold0494 (324-388)||(309-373)
[»] scaffold0422 (1 HSPs)
scaffold0422 (324-388)||(3336-3400)
[»] scaffold0254 (1 HSPs)
scaffold0254 (324-388)||(21060-21124)
[»] scaffold0074 (1 HSPs)
scaffold0074 (324-388)||(38441-38505)
[»] scaffold0064 (1 HSPs)
scaffold0064 (324-392)||(68270-68338)


Alignment Details
Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 185 - 328
Target Start/End: Original strand, 55146954 - 55147097
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||    
T  55146954 gtattgtttatgctggaattgttgtttagtgtaaatgtaggtacaatgtagccctttagatgttcaaataacactagttgtgctcctaatttagaacgca 55147053  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  55147054 cataaggtgtttgatgaaatgcctaagtgagaaaatgttgcttt 55147097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 30716286 - 30716411
Alignment:
Q  203 ttgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcacataagatgtttgatgaa 302  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  30716286 ttgttgtttagtgtaaatgtaggtacaatgtagccctttagatgttcaaataacactagctgtgctcctaatttagagtgcacataaggtgtttgatgaa 30716385  T
Q  303 atgcctaagtgagaaaatgttgcttt 328  Q
    ||||||||||||||||||||||||||    
T  30716386 atgcctaagtgagaaaatgttgcttt 30716411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 55146789 - 55146891
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  55146789 gaatttgcgccaaatttcatcaattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttctttagggtgttagttttcataattttg 55146888  T
Q  118 agc 120  Q
    |||    
T  55146889 agc 55146891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 30716101 - 30716202
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  30716101 gaatttgcgccaaatttcatcaattaattcacaagtaagttctttccttcctatttacatgcagtgtagtttgtttagggtgttagttttcataattttg 30716200  T
Q  118 ag 119  Q
    ||    
T  30716201 ag 30716202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 48161715 - 48161817
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  48161715 gaatttgcgccaaatttcatcaattaattcataagtaagttcttttcttcctatttacatgcaatgtagtttgtttagggtgttagttttcataaatttg 48161814  T
Q  118 agc 120  Q
    |||    
T  48161815 agc 48161817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 18946371 - 18946279
Alignment:
Q  28 caaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18946371 caaatttcatcaattaattcacaagtaagttatttccttcctatttacatgcaatgtagtttgtttagggtgttagttttcataaatttgagc 18946279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 185 - 320
Target Start/End: Complemental strand, 183492 - 183357
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||||||||||||||||||||||| |  || ||| ||| ||||||||||||||| ||| |||||||||||| || ||||| ||||||||||||||    
T  183492 gtattgtttatgctggaattgttgtttagagacaatgtatgtacaatgtagccctttagatgttcaaataacactaattatgctcttaatttagaatgca 183393  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaat 320  Q
    |||||| |||||||| |||||| |||||||| ||||    
T  183392 cataaggtgtttgataaaatgcataagtgaggaaat 183357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 30152514 - 30152404
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30152514 gctttctaatggctttggtttgacgtccaaatgatttttagaatttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 30152415  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  30152414 cataacttttt 30152404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 51158689 - 51158799
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  51158689 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatggttcatgtggatttttgtgaaaacttat 51158788  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  51158789 cataacttttt 51158799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 48161882 - 48162010
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    ||||||||||||| ||||||||||||| |  || ||||||| ||||||||||||||| ||| |||||| ||||| || ||||||||||||||||||||||    
T  48161882 attgtttatgctgtaattgttgtttagagacaatgtaggtacaatgtagccctttagatgttcaaatagcactaattatgctcctaatttagaatgcaca 48161981  T
Q  287 taagatgtttgatgaaatgcctaagtgag 315  Q
    |||| |||||||| |||||| ||||||||    
T  48161982 taaggtgtttgataaaatgcataagtgag 48162010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 327 - 433
Target Start/End: Complemental strand, 27840520 - 27840413
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcat 425  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27840520 ttctaatgactttggtttgacgtccaaataattattagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcat 27840421  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  27840420 aacttttt 27840413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 14528670 - 14528780
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||||||||  |||| |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14528670 gctttctaatggatttggtttgacttccaaatgatttttagaactttagttatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 14528769  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  14528770 cataacttttt 14528780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 16934856 - 16934960
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatg-tgatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16934856 gctttctaatggccttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgcggatttttgtgaaaacttat 16934955  T
Q  423 cataa 427  Q
    |||||    
T  16934956 cataa 16934960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 45031707 - 45031799
Alignment:
Q  28 caaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  45031707 caaatttcatcaattaattcacaagtaagttatttccttcctgtttacatgcaatgtagtttgtttaggatgttagttttcataaatttgagc 45031799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 8276519 - 8276629
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| || |||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  8276519 gctttctaatggctttggtttgacgtcgaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 8276618  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  8276619 cataacttttt 8276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 17956874 - 17956984
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||| |||| ||||| |||||| || |||| || |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17956874 gctttccaatggctttggtttgacatctaaatgatatttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 17956973  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  17956974 cataacatttt 17956984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 28557434 - 28557324
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||| |||| |||||||||||  ||||||| || |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28557434 gctttcaaatggctttgatttgaagtccaaatgatatttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 28557335  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  28557334 cgtaacttttt 28557324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 49231832 - 49231722
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49231832 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 49231733  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  49231732 cgtaacttttt 49231722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 54039172 - 54039282
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  54039172 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgatcaaattaatacacatgagtcatgtggatttttgtgaaaacttat 54039271  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  54039272 cataacttttt 54039282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 8269408 - 8269518
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||| | |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  8269408 gctttctaatggcttgggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 8269507  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  8269508 cgtaacttttt 8269518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 25058362 - 25058252
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  25058362 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacataggtcatgtggatttttgtgaaaacttat 25058263  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  25058262 cgtaacttttt 25058252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 44228567 - 44228470
Alignment:
Q  337 tttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  44228567 tttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcataacttttt 44228470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 187 - 299
Target Start/End: Complemental strand, 18946204 - 18946092
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    |||||||||| || ||||||||||||| |  || ||||||| ||||||||||||||| ||| |||||||||||| || ||||||||||||||||||| ||    
T  18946204 attgtttatgatgtaattgttgtttagagacaatgtaggtacaatgtagccctttagatgttcaaataacactaattatgctcctaatttagaatgctca 18946105  T
Q  287 taagatgtttgat 299  Q
    |||| ||||||||    
T  18946104 taaggtgtttgat 18946092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 1468659 - 1468769
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  1468659 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 1468758  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  1468759 cataacttttt 1468769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 16820526 - 16820416
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||||   ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16820526 gctttctaatggcattggtttggtgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 16820427  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16820426 cataacttttt 16820416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 433
Target Start/End: Original strand, 12265468 - 12265575
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcat 425  Q
    |||||||| ||||| |||| | | ||||| | |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  12265468 ttctaatggctttggtttggcattcaaatgagttttagaatttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttgtcat 12265567  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  12265568 aacttttt 12265575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 433
Target Start/End: Complemental strand, 12808536 - 12808459
Alignment:
Q  357 atttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||||||||||||||  |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  12808536 atttttagaacttgagatatgattaaattactacatatgggtcatgtggatttttgtgaaaacttatcataacttttt 12808459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 37222635 - 37222546
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| ||||||| ||||| |||| | || |||| |||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  37222635 ccaaatttcatcaattaatttacaagaaagtacctttcttcttatttacatgcaatgtaggtttcttagggtgttagttttcataatttt 37222546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 47867779 - 47867864
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataa 112  Q
    |||||||||||| ||||||||||  |||||| | || |||| |||||||||||||||||| ||| |||| ||||||||||||||||    
T  47867779 ccaaatttcatcaattaattcactggtaagtacctttcttcttatttacatgcaatgtaggttgcttagggtgttagttttcataa 47867864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 18895610 - 18895685
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  18895610 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaatcttgcttt 18895685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 4950717 - 4950648
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||||||||| ||| ||| |||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  4950717 tcacaagtaagttattttctttctatttacatgcaaggtagtttgtttagggtgtta-ttttcataatttt 4950648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 53562315 - 53562248
Alignment:
Q  48 acaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||| | || ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  53562315 acaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtt-gttttcataatttt 53562248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 45031863 - 45031958
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatg 282  Q
    |||||||||| || |||||||| |||| |  || ||||||| |||||||| |||||| |||  ||||||||||| |  ||||||||||||||||||    
T  45031863 attgtttatgttgtaattgttgcttagagacaatgtaggtacaatgtagctctttagatgtctaaataacactaatcatgctcctaatttagaatg 45031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 433
Target Start/End: Original strand, 18897675 - 18897782
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttatcat 425  Q
    |||||||| ||||| | |||| | ||||| ||||| | ||||| | ||||||  || ||| ||||||||| ||||||| |||||||||||||||||| ||    
T  18897675 ttctaatggctttggtctgacattcaaatgattttcataacttaagttatgaataatttattacacatggatcatgtggatttttgtgaaaacttataat 18897774  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  18897775 aacttttt 18897782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 6468920 - 6468984
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| |||||||||| ||||  ||||||||||    
T  6468920 gctttctaatgccgttggtttgacttcaaaagaatttatagaacttgagttatagtcaaattact 6468984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 7781132 - 7781196
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  7781132 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 7781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 10247509 - 10247573
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||  ||||||||||    
T  10247509 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgatttatactcaaattact 10247573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 12567936 - 12567872
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||  ||||||||||    
T  12567936 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatagtcaaattact 12567872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 15977909 - 15977845
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| |||||||||| ||||  ||||||||||    
T  15977909 gctttctaatgccgttggtttgacttcaaaagaatttatagaacttgagttatagtcaaattact 15977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 20629977 - 20630041
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  20629977 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 20630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 27165629 - 27165565
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||  ||||||||| |||  |||| |||||||||| ||||||||||||||||    
T  27165629 gctttctaatgccgttagtttgacttcaaaaggatttatagaacttgagttatgatcaaattact 27165565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 29544627 - 29544691
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||| ||| ||| ||||| |||||||||| ||||| ||||||||||    
T  29544627 gctttctaatgccgttggtttgatttcaaaagaatttatagaacttgagttatggtcaaattact 29544691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 46822638 - 46822574
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  46822638 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 46822574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 54521199 - 54521135
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  54521199 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 54521135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 19870859 - 19870997
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  19870859 gtattgtttatgctg-aattgttgtttagtgtaaaagtaggtacaatgcagccctttagatgtacaaataacactagttgtgcccctattttagaatgca 19870957  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttg 324  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  19870958 cataaggtgtttgatgaaatgcctaagtgagaaaatgttg 19870997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 19870694 - 19870795
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19870694 gaatttgcgccaaatttcatcaattaattcacaagtaagttatttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 19870793  T
Q  118 ag 119  Q
    ||    
T  19870794 ag 19870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 27183214 - 27183324
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27183214 gctttctaatggctttggtttgacttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 27183313  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  27183314 cataacttttt 27183324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 187 - 328
Target Start/End: Complemental strand, 9042075 - 9041934
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    |||||||||| || ||||||||||||| |  || ||||||| ||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||    
T  9042075 attgtttatgatgtaattgttgtttagagacaatgtaggtacaatgtagccctttagatgttcaaataacactaattatgctcctaatttagaatgcaca 9041976  T
Q  287 taagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||| |||||||| |||||| |||||||| |||| |||||||    
T  9041975 taaggtgtttgataaaatgcataagtgaggaaatcttgcttt 9041934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 35791770 - 35791880
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  35791770 gctttctaatgactttggtttgacgttcaaataatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 35791869  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  35791870 cataacttttt 35791880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 43444054 - 43444164
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  43444054 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 43444153  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  43444154 cataacttttt 43444164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 23506565 - 23506457
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  23506565 tttctaatgactttggtttgacgtccaaatgatttttagaacttgtgttatgatcaaattactacacgtgggtcatgtggatttttgtgaaaacttatca 23506466  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  23506465 taacttttt 23506457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 10778837 - 10778947
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10778837 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 10778936  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  10778937 cataacttttt 10778947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 11212739 - 11212849
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||| ||| ||||| ||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11212739 gctttcttatggctttggtttaacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 11212838  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  11212839 cataacttttt 11212849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 11342254 - 11342144
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11342254 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 11342155  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  11342154 cataacttttt 11342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22883949 - 22884059
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22883949 gctttctaatggctttggtttgacgttcaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 22884048  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  22884049 cgtaacttttt 22884059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 23511191 - 23511081
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||| ||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  23511191 gctttttaatggctttggtttgacatccaaatgatttttagaacttgagttatgatcaaattactaaacatgggtcatgtggatttttgtgaaaacttat 23511092  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  23511091 cataacttttt 23511081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 1168837 - 1168947
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||| ||||||||| |||||| | |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  1168837 gctttctaatggctttggtttggcttccaaatgattttttggacttgagttatgatcaaattactacacatgagtcatgtggatttttgtgaaaacttat 1168936  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  1168937 cataacttttt 1168947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 1220389 - 1220499
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1220389 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 1220488  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  1220489 cgtaacttttt 1220499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 11967 - 11862
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11967 gctttctaatggcattggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 11868  T
Q  423 cataac 428  Q
    ||||||    
T  11867 cataac 11862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 21074254 - 21074359
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  21074254 gctttctaatggcattggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 21074353  T
Q  423 cataac 428  Q
    ||||||    
T  21074354 cataac 21074359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 22367140 - 22367245
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||| |||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  22367140 gctttctaatggctttggtttgacgtccaaatgatttttaaaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 22367239  T
Q  423 cataac 428  Q
    ||||||    
T  22367240 cataac 22367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 25426241 - 25426136
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  25426241 gctttctaatggcattggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 25426142  T
Q  423 cataac 428  Q
    ||||||    
T  25426141 cataac 25426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 7424941 - 7424837
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  7424941 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgatcaaattaatacacatgagtcatgtggatttttgtgaaaacttat 7424842  T
Q  423 cataa 427  Q
    |||||    
T  7424841 cataa 7424837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 18778653 - 18778761
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| ||| || ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18778653 tttctaatggctttggttttacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatca 18778752  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  18778753 taacttttt 18778761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 32950277 - 32950167
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||  ||| ||||||||||||||||| | |||| |||||| |||||||||||||||||||    
T  32950277 gctttctaatggctttggtttgacgtccaaataatttttagaatgtgagttatgatcaaattactaaatatggatcatgtggatttttgtgaaaacttat 32950178  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  32950177 cataacttttt 32950167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 19499492 - 19499387
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||  ||||| |||||| ||||||| | |||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  19499492 gctttctaatagctttggtttgacgtccaaatgagttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 19499393  T
Q  423 cataac 428  Q
    ||||||    
T  19499392 cataac 19499387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 10826903 - 10826807
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| |||||||||| || | ||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  10826903 atttgagccaaatttcttcaagtaattaacaagtaagttattttcttcctatttacatgcaatgtaggttgtttagggtgttagttttcataatttt 10826807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 35581404 - 35581294
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  35581404 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 35581305  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  35581304 cataacttttt 35581294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 36990684 - 36990794
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  36990684 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 36990783  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  36990784 cataacttttt 36990794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 7250281 - 7250370
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagt-tctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  7250281 ccaaatttcatcaattaattcacaagtaagtatcttt-cttcttatttacatgcaatgtaggttgcttagggtgttagttttcataatttt 7250370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 21933288 - 21933398
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||     
T  21933288 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacaggggtcatgtgaatttttgtgaaaacttag 21933387  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  21933388 cataacttttt 21933398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 21939458 - 21939568
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||     
T  21939458 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacaggggtcatgtgaatttttgtgaaaacttag 21939557  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  21939558 cataacttttt 21939568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 42449847 - 42449759
Alignment:
Q  28 caaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||| || | ||||| ||||||||||| ||| ||| |||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  42449847 caaatttcttcaagtaattaacaagtaagttattttctttctatttgcatgcaatgtaggttgtttagggtgttagttttcataatttt 42449759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 9042213 - 9042150
Alignment:
Q  57 ttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  9042213 ttctttcctttctatttacatgtaatgtagtttgtttagggtgttagttttcataaatttgagc 9042150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 23328136 - 23328035
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcat 425  Q
    |||||||| ||||| |||||  | ||||  ||||||||||||||  |||||||||||||| |||||||| || |||| ||||||||||||||||||||||    
T  23328136 ttctaatggctttggtttgatattcaaaggatttttagaacttgggttatgatcaaattaatacacatgagttatgtggatttttgtgaaaacttatcat 23328037  T
Q  426 aa 427  Q
    ||    
T  23328036 aa 23328035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9042280 - 9042232
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttcctt 66  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9042280 gaatttgcgccaaatttcatcaattaattcacaagtaagttctttcctt 9042232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 23062445 - 23062518
Alignment:
Q  42 taattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| ||||||||||| |||  || |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  23062445 taattaacaagtaagttattttatttctatttacatgcaatgtagtttgtttagggtgtta-ttttcataatttt 23062518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 23062654 - 23062729
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  ||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  23062654 taacactaattgtgctaatattttgaaatgcacttaaggtgtttgatgaaatgcctaagtgagaaaatattgcttt 23062729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 10826644 - 10826595
Alignment:
Q  279 aatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  10826644 aatgcacataaggtgtttgatgaaatgcctaagtgataaaatcttgcttt 10826595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 42449598 - 42449549
Alignment:
Q  279 aatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  42449598 aatgcacataaggtgtttgatggaatgcctaagtgagaaaatcttgcttt 42449549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 39363761 - 39363697
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    |||||||| || | ||||||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  39363761 gctttctagtgccgttgatttgacttcaaaatgatttatagaacttgagttatggtcaaattact 39363697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 296060 - 296124
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||||| ||| | |||| || ||| ||||| |||||||||| ||||| ||||||||||    
T  296060 gctttctaatgacgttggtctgacgtcaaaacaatttatagaacttgagttatggtcaaattact 296124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 2154417 - 2154481
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  2154417 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 2154481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 24615748 - 24615680
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatg 395  Q
    |||||||| ||||| |||||  | ||||| ||||||||||||||  ||| |||||||||| ||||||||    
T  24615748 ttctaatggctttggtttgatattcaaatgatttttagaacttgggttaggatcaaattaatacacatg 24615680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 24712146 - 24712078
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatg 395  Q
    |||||||| ||||| |||||  | ||||| ||||||||||||||  ||| |||||||||| ||||||||    
T  24712146 ttctaatggctttggtttgatattcaaatgatttttagaacttgggttaggatcaaattaatacacatg 24712078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 24745142 - 24745074
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatg 395  Q
    |||||||| ||||| |||||  | ||||| ||||||||||||||  ||| |||||||||| ||||||||    
T  24745142 ttctaatggctttggtttgatattcaaatgatttttagaacttgggttaggatcaaattaatacacatg 24745074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 29346356 - 29346292
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||  ||||||||||    
T  29346356 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgatttatactcaaattact 29346292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 185 - 328
Target Start/End: Complemental strand, 39390576 - 39390433
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    |||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  39390576 gtattgtttattatggaattgttgtttagtgtaaatgtaggtacaatgtagccctttagatgttcaaataacactagttgtgctcctaatttagaatgca 39390477  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
     ||||| ||||||||||||||||||||| | || ||||||||||    
T  39390476 gataaggtgtttgatgaaatgcctaagtaacaacatgttgcttt 39390433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 39390739 - 39390637
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39390739 gaatttgcgccaaatttcatcaattaattcacaagtaagttccttccttcctatttacatgcaatgtagtttgtttagggtgttagttttcataattttg 39390640  T
Q  118 agc 120  Q
    |||    
T  39390639 agc 39390637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 14951334 - 14951224
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14951334 gctttctaatggctttggtttgacttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 14951235  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  14951234 cataacttttt 14951224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 55377231 - 55377341
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  55377231 gctttctaatggctttggtttgacttccaaatgatttttagaacttgagttatgatcaaattattacacatgggtcatgtggatttttgtgaaaacttat 55377330  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  55377331 cataacttttt 55377341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 25120080 - 25120190
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  25120080 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggccatgtggatttttgtgaaaacttat 25120179  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  25120180 cataacttttt 25120190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 18293703 - 18293811
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  18293703 tttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttatcg 18293802  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  18293803 taacttttt 18293811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 43281731 - 43281835
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| || || ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43281731 gctttctaatggctatggttttacttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 43281830  T
Q  423 cataa 427  Q
    |||||    
T  43281831 cataa 43281835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 5683401 - 5683511
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||| ||||  |||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5683401 gctttccaatggttttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 5683500  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  5683501 cataacttttt 5683511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 18247803 - 18247693
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  18247803 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 18247704  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  18247703 cataacttttt 18247693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22355105 - 22355215
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  22355105 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtgaatttttgtgaaaacttat 22355204  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  22355205 cataacttttt 22355215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 55741283 - 55741193
Alignment:
Q  30 aatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    |||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55741283 aatttcttcaattaattcacaagaaagttcttttcttcctatttacatgcaatgtagtttgtttagggtgttagttttcataattttgagc 55741193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 433
Target Start/End: Complemental strand, 8374103 - 8373994
Alignment:
Q  325 ctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatc 423  Q
    |||||||||| ||||||||| || ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8374103 ctttctaatggctttgattttacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatc 8374004  T
Q  424 ataacctttt 433  Q
    ||||| ||||    
T  8374003 ataacttttt 8373994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 433
Target Start/End: Complemental strand, 16731736 - 16731630
Alignment:
Q  328 tctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcata 426  Q
    ||||||| ||||| |||||||||||||| |||||| |||||||| |||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16731736 tctaatggctttggtttgacttccaaatgattttttgaacttgagttatcataaaattactacacatgggtcatgtggatttttgtgaaaacttatcata 16731637  T
Q  427 acctttt 433  Q
    || ||||    
T  16731636 acttttt 16731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 17146325 - 17146435
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  17146325 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatggatcatgtggatttttgtgaaaacttat 17146424  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  17146425 cataacttttt 17146435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 18168357 - 18168247
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | |||||||||  ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  18168357 gctttctaatggcgttgatttgaggtccaaatgatttttagaacttgagttatgattaaattactacacatgggtcatgtggagttttgtgaaaacttat 18168258  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  18168257 cataacttttt 18168247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 433
Target Start/End: Original strand, 19698030 - 19698128
Alignment:
Q  336 ctttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  19698030 ctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttagcataacttttt 19698128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 433
Target Start/End: Original strand, 19708615 - 19708713
Alignment:
Q  336 ctttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  19708615 ctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttagcataacttttt 19708713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 47357247 - 47357137
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  47357247 gctttctaatggccttggtttgacatccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 47357148  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  47357147 cataacttttt 47357137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 10643810 - 10643705
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||||||||  |||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  10643810 gctttctaatggttttggtttgacatccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 10643711  T
Q  423 cataac 428  Q
    ||||||    
T  10643710 cataac 10643705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 55741128 - 55740995
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    ||||||||||||| |||| |||||||| ||||| ||||||| |||||||   ||||| |||  ||||||||||| |||||||  ||||||| |||||||     
T  55741128 attgtttatgctgtaattcttgtttagagtaaatgtaggtacaatgtagttgtttagatgtttaaataacactaattgtgctagtaatttataatgcact 55741029  T
Q  287 taagatgtttgatgaaatgcctaagtgagaaaat 320  Q
    |||| |||||||||||||||||||||||||||||    
T  55741028 taaggtgtttgatgaaatgcctaagtgagaaaat 55740995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 15295014 - 15295118
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  15295014 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgatcaaattaatacacatgagtcatgtggatttttgtgaaaacttat 15295113  T
Q  423 cataa 427  Q
    |||||    
T  15295114 cataa 15295118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 14995708 - 14995598
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  || |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14995708 gctttctaatgtcgttggtttgaggtctaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 14995609  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  14995608 cgtaacttttt 14995598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 15287904 - 15288008
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  ||||||||||||| |||||||| ||||||| || ||||||||||||||||    
T  15287904 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgatcaaattaatacacatgagtcatgtggaattttgtgaaaacttat 15288003  T
Q  423 cataa 427  Q
    |||||    
T  15288004 cataa 15288008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 12028184 - 12028095
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| |||||||||||||||||| | || |||| |||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  12028184 ccaaatttcatcaattaattcacaagtaagtacctttcttcttatttacatgcaatgtaggttgcttagggtgttagttttcataatttt 12028095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 19020073 - 19019962
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||||||||  |||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||| | ||||||| ||||||||||||||||||     
T  19020073 gctttctaatggttttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacacgagtcatgtggatttttgtgaaaacttag 19019974  T
Q  423 cataaccttttt 434  Q
    |||||| |||||    
T  19019973 cataactttttt 19019962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31302491 - 31302586
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| |||||||||| || | ||||| ||||||||||| |||  || |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  31302491 atttgagccaaatttcttcaagtaattaacaagtaagttattttatttctatttacatgcaatgtagtttgtttagggtgtta-ttttcataatttt 31302586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 54603809 - 54603734
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  54603809 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaatcttgcttt 54603734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 26338602 - 26338500
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatt-tttgtgaaaacttatca 424  Q
    |||||||| ||||| |||||  | ||||| ||||||||||||||  ||| |||||||||| |||||||| || |||| |||| |||||||||||||||||    
T  26338602 ttctaatggctttggtttgatattcaaatgatttttagaacttgggttaggatcaaattaatacacatgagttatgtggattctttgtgaaaacttatca 26338503  T
Q  425 taa 427  Q
    |||    
T  26338502 taa 26338500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 54604014 - 54603945
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||| ||||||||| |||||||| |||||| |||||||||||||    
T  54604014 tcacaagtaagtacctttcttcctatttacaagcaatgtaggttgtttagggtgtta-ttttcataatttt 54603945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 400
Target Start/End: Original strand, 14970492 - 14970568
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtca 400  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| |||||||||| ||||| |||||    
T  14970492 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattactgcacataggtca 14970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 19857955 - 19857891
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||||||||| |||||||||| ||||| ||||||||||    
T  19857955 gctttctaatgccgttggtttgacttcaaaataatttatagaacttgatttatggtcaaattact 19857891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 433
Target Start/End: Complemental strand, 22737850 - 22737743
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttatcat 425  Q
    |||||||| ||||| |||||| | ||||| ||||||| ||||| | ||||||  || ||||||||| ||||||||||| | |||||| |||||||| |||    
T  22737850 ttctaatggctttggtttgacattcaaatgatttttataacttaagttatgagtaatttactacacgtgggtcatgtgaacttttgttaaaacttaacat 22737751  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  22737750 aacttttt 22737743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 12027933 - 12027884
Alignment:
Q  279 aatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    ||||||| |||| ||||||||||||||||||||||| | ||| |||||||    
T  12027933 aatgcacttaaggtgtttgatgaaatgcctaagtgaaataatcttgcttt 12027884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 401
Target Start/End: Original strand, 49547559 - 49547636
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcat 401  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| |||||||||| ||| | ||||||    
T  49547559 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattactgcacgtaggtcat 49547636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 3515384 - 3515320
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| ||||||||||  |||| ||||||||||    
T  3515384 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagctatggtcaaattact 3515320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 9610902 - 9610862
Alignment:
Q  362 tagaacttgaattatgatcaaattactacacatgggtcatg 402  Q
    |||||||||| ||||||||||| |||||||||| |||||||    
T  9610902 tagaacttgagttatgatcaaaatactacacataggtcatg 9610862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 15534558 - 15534494
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  15534558 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 15534494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 52872858 - 52872922
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  52872858 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 52872922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 185 - 328
Target Start/End: Complemental strand, 40614416 - 40614273
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||||||||||||||||||||||  ||||| ||||||| |||||| |||||||| ||| ||||||||| || |||||||||||||||||||||||    
T  40614416 gtattgtttatgctggaattgttgtttatagtaaatgtaggtacaatgtaaccctttagatgttcaaataacattaattgtgctcctaatttagaatgca 40614317  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  40614316 cataaggtgtttgatgaaatgcctaagtgagaaaatattgcttt 40614273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 27261396 - 27261286
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27261396 gctttctaatggctttggtttgacttccaaataatttttataacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 27261297  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  27261296 cataacttttt 27261286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 67401 - 67293
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  67401 tttctaatggctttggtttgacttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttatca 67302  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  67301 taacttttt 67293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 40614581 - 40614479
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||| ||| || || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  40614581 gaatttgcgcccaatgtcttcgattaattcacaagtaagttctttccttcctatatacatgcaatgtagtttgtttagggtgttagttttcataattttg 40614482  T
Q  118 agc 120  Q
    |||    
T  40614481 agc 40614479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 19508050 - 19508143
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  19508050 ccaaatttcatcaattaattcacaagtaagttctttccttcctatttacatgcaatgtactttgtttagggtgttagtttttataattttgagc 19508143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 16900879 - 16900769
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  16900879 gctttctaatgactttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacgtgggtcatgtggatttttgtaaaaacttat 16900780  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16900779 cataacttttt 16900769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 16994270 - 16994160
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  16994270 gctttctaatgactttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacgtgggtcatgtggatttttgtaaaaacttat 16994171  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16994170 cataacttttt 16994160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 24686643 - 24686753
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24686643 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgcgttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 24686742  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  24686743 cataacttttt 24686753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 34823814 - 34823704
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||| ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34823814 gctttctaatgacgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 34823715  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  34823714 cgtaacttttt 34823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 19887320 - 19887425
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  19887320 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 19887419  T
Q  423 cataac 428  Q
    ||||||    
T  19887420 cataac 19887425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 29899567 - 29899646
Alignment:
Q  249 caaataacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  29899567 caaataacactaattgtgctcctaatttagaatgcgcataaggtgtttgatgaaatgcctaagtgagaaaatgttacttt 29899646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 328
Target Start/End: Original strand, 21831429 - 21831570
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    |||||||||||||| ||||||| |||| ||||   |||||| |||||||   ||||| ||| |||||| ||||| || |||| ||||||||||||||||     
T  21831429 attgtttatgctggcattgttgcttagagtaagtttaggtacaatgtagttgtttagttgttcaaatagcactaattctgctactaatttagaatgcact 21831528  T
Q  287 taagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||| ||||||||||||||||||||||||| ||| |||||||    
T  21831529 taaggtgtttgatgaaatgcctaagtgagataatcttgcttt 21831570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 26170638 - 26170727
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  26170638 ccaaatttcatcaattaactcacaagtaagttcttttcttcttatttacatgcaatgtaggttgtttagggtgttagttctcataatttt 26170727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 12727775 - 12727664
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg--atttttgtgaaaactta 421  Q
    ||||||||||| | |||  ||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |   ||||||||||||||||    
T  12727775 gctttctaatggccttgggttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgcggattttttgtgaaaactta 12727676  T
Q  422 tcataacctttt 433  Q
    ||||||| ||||    
T  12727675 tcataacttttt 12727664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 11232258 - 11232368
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  11232258 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 11232357  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  11232358 cataacttttt 11232368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22514105 - 22514215
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  22514105 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 22514204  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  22514205 cataacttttt 22514215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 28776707 - 28776817
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  28776707 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 28776806  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  28776807 cataacttttt 28776817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 5889313 - 5889411
Alignment:
Q  337 tttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gattttt-gtgaaaacttatcataacctttt 433  Q
    |||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  5889313 tttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttggtgaaaacttatcataacttttt 5889411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 21141478 - 21141381
Alignment:
Q  337 tttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||| |||||| ||||||| |||||||||||||||  |||||| ||| ||||||||||||||||||| |||||||||||||| ||||| |||| ||||    
T  21141478 tttggtttgacgtccaaatgatttttagaacttgagatatgattaaaatactacacatgggtcatgtggatttttgtgaaaatttatcgtaacttttt 21141381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 22274086 - 22273981
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  || |||| ||||||| ||||||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  22274086 gctttctaatggccttggtttgatgtctaaatgatttttaaaacttgagttatgatcaaattactaaacatgggtcatatggatttttgagaaaacttat 22273987  T
Q  423 cataac 428  Q
    ||||||    
T  22273986 cataac 22273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 29899370 - 29899466
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| |||||||||| || | ||||| ||||||| ||| ||| ||||||||||  ||||||||||| |||||||| ||||||||||||||||||||    
T  29899370 atttgagccaaatttcttcaagtaattaacaagtatgttattttcttcctatttcaatgcaatgtaggttgtttagggtgttagttttcataatttt 29899466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 22283319 - 22283214
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  || |||| |||||||  |||||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  22283319 gctttctaatggccttggtttgatgtctaaatgatttttaatacttgagttatgatcaaattactaaacatgggtcatatggatttttgagaaaacttat 22283220  T
Q  423 cataac 428  Q
    ||||||    
T  22283219 cataac 22283214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 34457205 - 34457271
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataat 113  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  34457205 tcacaagtaagttattttctttctatttacatgcaatgtagtttgtttagggtgtta-ttttcataat 34457271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 31509066 - 31508991
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  31509066 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaattcctaagtgagaaaatcttgcttt 31508991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 23773717 - 23773615
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatt-tttgtgaaaacttatca 424  Q
    |||||||| ||||| |||||  | ||||| ||||||||||||||  ||| |||||||||| |||||||| || |||| |||| |||||||||||||||||    
T  23773717 ttctaatggctttggtttgatattcaaatgatttttagaacttgggttaggatcaaattaatacacatgagttatgtggattctttgtgaaaacttatca 23773618  T
Q  425 taa 427  Q
    |||    
T  23773617 taa 23773615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 405
Target Start/End: Complemental strand, 15855498 - 15855450
Alignment:
Q  357 atttttagaacttgaattatgatcaaattactacacatgggtcatgtga 405  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  15855498 atttttagaacttgagttatggtcaaattactacacatcggtcatgtga 15855450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 2121101 - 2121032
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||||||||   || ||||||||||||||||||||||| ||||| || |||||| |||||||||||||    
T  2121101 tcacaagtaagtatatttcttcctatttacatgcaatgtaggttgttcagggtgtta-ttttcataatttt 2121032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 34457412 - 34457473
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtga 314  Q
    |||||||| |||||||  || |||| ||||||| |||| |||||||||||||||||||||||    
T  34457412 taacactaattgtgctagtattttaaaatgcacttaaggtgtttgatgaaatgcctaagtga 34457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 400
Target Start/End: Original strand, 21154793 - 21154869
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtca 400  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||  |||||||||| ||||| |||||    
T  21154793 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatagtcaaattactgcacataggtca 21154869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 22105842 - 22105778
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  22105842 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 22105778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 32214716 - 32214780
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  32214716 gctttctaatgccattggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 32214780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 316
Target Start/End: Original strand, 19508208 - 19508338
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtag-ccctttaggtgtacaaataacactagttgtgctcctaatttagaat-gca 284  Q
    ||||||||||||||||||| ||||||| ||||  || ||||||||||||     || | |||  ||||||||||| |||||||  | |||| |||| |||    
T  19508208 attgtttatgctggaattgatgtttagagtaagtgttggtataatgtagttgaatttgatgttgaaataacactaattgtgctagt-attttgaatagca 19508306  T
Q  285 cataagatgtttgatgaaatgcctaagtgaga 316  Q
    | |||| |||||||||||||||||||||||||    
T  19508307 cttaaggtgtttgatgaaatgcctaagtgaga 19508338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 26170865 - 26170927
Alignment:
Q  254 aacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgaga 316  Q
    ||||||| |||||||  ||||||  ||||||| |||| | |||||||||||||||||||||||    
T  26170865 aacactaattgtgctagtaatttgaaatgcacttaaggtatttgatgaaatgcctaagtgaga 26170927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 401
Target Start/End: Original strand, 45027690 - 45027767
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcat 401  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||||||||  |||||||||| ||| | ||||||    
T  45027690 gctttctaatgccattggtttgacttcaaaaggatttatagaacttgaattatagtcaaattactgcacgtaggtcat 45027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 20261596 - 20261532
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  20261596 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 20261532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 185 - 328
Target Start/End: Original strand, 5614213 - 5614355
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    |||||||||||||||||||||||||||| | |||| ||||||| | ||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  5614213 gtattgtttatgctggaattgttgtttactataaatgtaggtaca-tgtggccctttagatgttcaaataacactagttgtgctcctaatttataatgca 5614311  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||| ||||||||||||||| |||||||||||||||||||||    
T  5614312 cataaggtgtttgatgaaatgcttaagtgagaaaatgttgcttt 5614355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 5614036 - 5614138
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  5614036 gaatttgcaccaaatttcatcaattaattcacaagtaagttctttccttcctatttacatgcaatgtagtctgtttagggtgttagttttcataagtttg 5614135  T
Q  118 agc 120  Q
    |||    
T  5614136 agc 5614138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 187 - 328
Target Start/End: Complemental strand, 1259741 - 1259600
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    |||||||||| || ||||||||||||| ||||  ||||||| |||||||   ||||| ||| |||||||||||| || ||||||||||||||||||||||    
T  1259741 attgtttatgttgtaattgttgtttagagtaagtgtaggtacaatgtagttgtttagatgttcaaataacactaattatgctcctaatttagaatgcaca 1259642  T
Q  287 taagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  1259641 taaggtgtttgatgaaatgcgtaagtgagaaaatgttgcttt 1259600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 19273386 - 19273255
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||||||||||||||||||||||| |||    |||||| |||||||   ||||| ||| |||||||||||| |||||||||||||||||||||||    
T  19273386 gtattgtttatgctggaattgttgtttagagtaggtttaggtacaatgtagttgtttagatgttcaaataacactaattgtgctcctaatttagaatgca 19273287  T
Q  285 cataagatgtttgatgaaatgcctaagtgaga 316  Q
    |||||| |||||||||||||||||||||||||    
T  19273286 cataaggtgtttgatgaaatgcctaagtgaga 19273255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 1259918 - 1259816
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  1259918 gaatttgcgcccaatttcttcaattaattcacaagtaagttctttccttcctatttatatgcaatgtagtttgtttagggtgttagtttttataattttg 1259819  T
Q  118 agc 120  Q
    |||    
T  1259818 agc 1259816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 19984164 - 19984274
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  19984164 gctttctaatgactttggtttgacctccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaagttat 19984263  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  19984264 cataacttttt 19984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 35016049 - 35016159
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35016049 gctttctaatggctttgctttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 35016148  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  35016149 cataacttttt 35016159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 16633546 - 16633656
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||| || ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16633546 gctttctaatggctttggtttaacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 16633645  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16633646 cataacttttt 16633656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 16650220 - 16650330
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16650220 gctttctaatggctttggtttgacgtccaaatgaattttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 16650319  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16650320 cataacttttt 16650330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 16240360 - 16240255
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16240360 gctttctaatggctttggtttgacgtccaaatgatttttaggacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 16240261  T
Q  423 cataac 428  Q
    ||||||    
T  16240260 cataac 16240255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22226614 - 22226725
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttt-tagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaactta 421  Q
    ||||||||||| ||||| |||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22226614 gctttctaatggctttggtttgacgtccaaatgattttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaactta 22226713  T
Q  422 tcataacctttt 433  Q
    ||||||| ||||    
T  22226714 tcataacttttt 22226725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 1555591 - 1555481
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  1555591 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 1555492  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  1555491 cataacttttt 1555481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 16826413 - 16826523
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16826413 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 16826512  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16826513 cataacttttt 16826523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 25904539 - 25904434
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataattttt-agaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaactta 421  Q
    ||||||||||| ||||| |||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25904539 gctttctaatggctttggtttgacgtccaaatgattttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaactta 25904440  T
Q  422 tcataa 427  Q
    ||||||    
T  25904439 tcataa 25904434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 19609644 - 19609540
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  19609644 gctttctaatggctttggtttgacgtccaaataatttttagaacttgagatatgatcaaattaatacacatgagtcatgtggatttttgtgaaaacttat 19609545  T
Q  423 cataa 427  Q
    |||||    
T  19609544 cataa 19609540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 23153086 - 23152989
Alignment:
Q  337 tttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||| |||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23153086 tttggtttgacgtccaaatgatttttagaacttgagttatgataaaattactacacatgggtcatgtggatttttgtgaaaacttatcataacttttt 23152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 27654642 - 27654747
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  27654642 gctttctaatggcattggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 27654741  T
Q  423 cataac 428  Q
    ||||||    
T  27654742 cataac 27654747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 16556990 - 16557089
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||| || ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  16556990 gctttctaatggctttggtttaacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaanttttgtgaaaacttat 16557089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22593627 - 22593737
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    |||||||||||  |||  |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  22593627 gctttctaatggatttagtttgacttccaaatgatttttataacttgagttatgatcaaattactacacatgggtcatgtgaaattttgtgaaaaattat 22593726  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  22593727 cataacttttt 22593737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 21776141 - 21776246
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||||||  | |||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  21776141 gctttctaatggctttggtttgacgccaaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 21776240  T
Q  423 cataac 428  Q
    ||||||    
T  21776241 cataac 21776246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 10488035 - 10487925
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  10488035 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 10487936  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  10487935 cataacttttt 10487925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 16377293 - 16377403
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  16377293 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 16377392  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16377393 cataacttttt 16377403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 16384617 - 16384727
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  16384617 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 16384716  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  16384717 cataacttttt 16384727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 33315121 - 33315231
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33315121 gctttctaatggcgttggtttcaggtccaaatgatttttaaaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 33315220  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  33315221 cgtaacttttt 33315231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 25175176 - 25175071
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||  ||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  25175176 gctttctaatggcattggtttgacgtccaaatgatttttagatattgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 25175077  T
Q  423 cataac 428  Q
    ||||||    
T  25175076 cataac 25175071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 19273552 - 19273476
Alignment:
Q  19 aatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttag 95  Q
    |||||| ||| |||||| || ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  19273552 aatttgagcccaatttcttcaattaattcacaagtaagttttttccttcatatttacatgcaatgtagtttgtttag 19273476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 427
Target Start/End: Original strand, 29870474 - 29870551
Alignment:
Q  351 caaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataa 427  Q
    ||||| ||||||||||||||| |||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||    
T  29870474 caaatgatttttagaacttgagttatgatcaaattaatatacatgagtcatgtggatttttgtgaaaacttatcataa 29870551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 433
Target Start/End: Complemental strand, 19628944 - 19628837
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatg-tgatttttgtgaaaacttatcat 425  Q
    |||||||| ||||| |||| | | ||||| ||||||| ||||||| ||||||  || ||||||||||||||||||| ||||||||| ||||||||| |||    
T  19628944 ttctaatggctttggtttggcattcaaatgatttttataacttgagttatgactaatttactacacatgggtcatgttgatttttgggaaaacttaacat 19628845  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  19628844 aacttttt 19628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 394
Target Start/End: Complemental strand, 34963750 - 34963680
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacat 394  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| |||||||||| |||||    
T  34963750 gctttctaatgtcgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattactgcacat 34963680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 400
Target Start/End: Complemental strand, 22782603 - 22782527
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtca 400  Q
    ||||||||||| | ||| ||||||||| ||| ||||| ||||| |||| ||||| |||||||||| ||||| |||||    
T  22782603 gctttctaatgccgttggtttgacttcaaaagaatttatagaatttgagttatggtcaaattactgcacataggtca 22782527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 25535784 - 25535720
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  25535784 gctttctaatgtcgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 25535720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 26924426 - 26924490
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  26924426 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 26924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 30676495 - 30676559
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||||||||| |||||||||| ||||| | ||||||||    
T  30676495 gctttctaatgccgttggtttgacttcaaaataatttatagaacttgagttatggtaaaattact 30676559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 17377633 - 17377697
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  17377633 gctttctaatgccattggtttgacttcaaaagtatttatagaacttgagttatggtcaaattact 17377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 19005528 - 19005464
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  19005528 gctttctaatgtcgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 19005464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 23225154 - 23225198
Alignment:
Q  361 ttagaacttgaattatgatcaaattactacacatgggtcatgtga 405  Q
    ||||||||||| ||||| |||||||||||||||  ||||||||||    
T  23225154 ttagaacttgatttatggtcaaattactacacacaggtcatgtga 23225198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 28289122 - 28289186
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  28289122 gctttctaatgtcgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 28289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 185 - 328
Target Start/End: Original strand, 41958108 - 41958251
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||||||||||||||||||||||| |  || ||||||| |||||||||||| || ||| |||||||||||| || ||||||||||||||||||||    
T  41958108 gtattgtttatgctggaattgttgtttagagacaatgtaggtacaatgtagcccttcagatgttcaaataacactaattatgctcctaatttagaatgca 41958207  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||| |||||||| |||||| |||||||| |||| |||||||    
T  41958208 cataagttgtttgataaaatgcataagtgagtaaatcttgcttt 41958251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 46529342 - 46529240
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttg 117  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  46529342 gaatttgcgctaaatttcatcaattaattcacaagtaagttatttccttcctatttaaatgcaatgtagtttgtttagggtgttagttttcataaatttg 46529243  T
Q  118 agc 120  Q
    |||    
T  46529242 agc 46529240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 126029 - 125919
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  126029 gctttctaatggctttggtttgacttccaaatgagttttagaacttgagttatgatcaaattactaaacatgggtcatgtggatttttgtgaaaacttat 125930  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  125929 cataacttttt 125919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 11287040 - 11286930
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  11287040 gctttctaatggctttggtttgtcttccaaatgatttttagaacttgagttatgatcaaattactacacatggatcatgtagatttttgtgaaaacttat 11286941  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  11286940 cataacttttt 11286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 46529165 - 46529032
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    |||||||||| || ||||||||||||| |  || ||||||| ||||||||||||||| ||| |||||||||||| || ||||||||||||||||||| ||    
T  46529165 attgtttatgttgtaattgttgtttagagacaatgtaggtacaatgtagccctttagatgttcaaataacactaattatgctcctaatttagaatgctca 46529066  T
Q  287 taagatgtttgatgaaatgcctaagtgagaaaat 320  Q
    |||| |||||||| |||||| |||||||||||||    
T  46529065 taaggtgtttgataaaatgcataagtgagaaaat 46529032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 3938708 - 3938786
Alignment:
Q  42 taattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3938708 taattcacaagtaagttcttttcttcctatttacatgcaatgtagtttgtttagggtgttagttttcataattttgagc 3938786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 15760784 - 15760894
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  15760784 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 15760883  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  15760884 cataacttttt 15760894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 10001030 - 10001140
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||   |||||| || |||||||||||||||||||| |||||||||||||||||||    
T  10001030 gctttctaatgactttggtttgacgtccaaatgatttttagaacttgggatatgattaagttactacacatgggtcatgtggatttttgtgaaaacttat 10001129  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  10001130 cataacttttt 10001140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 32495097 - 32495206
Alignment:
Q  325 ctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatc 423  Q
    |||||||||| ||||| |||||  ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  32495097 ctttctaatggctttggtttgatgtccaaatgatttttagaacttgagttatgatcatattactacacatgggtcatgtggatttttgtgaaaacttatc 32495196  T
Q  424 ataacctttt 433  Q
     |||| ||||    
T  32495197 gtaacttttt 32495206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 185 - 328
Target Start/End: Complemental strand, 13953145 - 13953002
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    |||||||||||||| |||||||||||||| ||||  | ||||| |||||||   ||||| ||| |||||||||||| |||||||  ||||||  ||||||    
T  13953145 gtattgtttatgctagaattgttgtttagagtaagtgcaggtacaatgtagttgtttagatgttcaaataacactaattgtgctagtaatttgaaatgca 13953046  T
Q  285 cataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    | |||| |||||||||||||||||||| |||||||| |||||||    
T  13953045 cttaaggtgtttgatgaaatgcctaagagagaaaatcttgcttt 13953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 15951639 - 15951749
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  15951639 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 15951738  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  15951739 cgtaacttttt 15951749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 1937833 - 1937942
Alignment:
Q  325 ctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatc 423  Q
    |||||||||| ||||| |||||| ||||||| | |||||||| || | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1937833 ctttctaatggctttggtttgacgtccaaatgaattttagaattttagttatgatcaaattactaaacatgggtcatgtggatttttgtgaaaacttatc 1937932  T
Q  424 ataacctttt 433  Q
    ||||| ||||    
T  1937933 ataacttttt 1937942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 433
Target Start/End: Complemental strand, 15852039 - 15851930
Alignment:
Q  325 ctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatc 423  Q
    |||||||||| ||||| |||||  ||||||| |||||||||||||||  ||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  15852039 ctttctaatggctttggtttgatgtccaaatgatttttagaacttgagatattattaaattactacacatgggtcatgtggatttttgtgaaaacttatc 15851940  T
Q  424 ataacctttt 433  Q
    ||||| ||||    
T  15851939 ataacttttt 15851930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 1804730 - 1804622
Alignment:
Q  191 tttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcacataag 290  Q
    ||||||||||||||||||||||| |  || ||||||| ||| ||||||||||| ||| |||||||||||| || |||||||||||||||||||||||||     
T  1804730 tttatgctggaattgttgtttagagacaatgtaggtacaatatagccctttagatgttcaaataacactaattatgctcctaatttagaatgcacataaa 1804631  T
Q  291 atgtttgat 299  Q
     ||||||||    
T  1804630 gtgtttgat 1804622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 7822077 - 7821967
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  7822077 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 7821978  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  7821977 cataacttttt 7821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 7829388 - 7829278
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  7829388 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 7829289  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  7829288 cataacttttt 7829278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 27102557 - 27102667
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  27102557 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 27102656  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  27102657 cataacttttt 27102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 27109905 - 27110015
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  27109905 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 27110004  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  27110005 cataacttttt 27110015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 27175769 - 27175659
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  27175769 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 27175670  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  27175669 cataacttttt 27175659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 38784649 - 38784759
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  38784649 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 38784748  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  38784749 cataacttttt 38784759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 16418070 - 16417977
Alignment:
Q  337 tttgatttgacttccaaataattttt-agaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataac 428  Q
    |||| |||||| ||||||| |||||| |||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16418070 tttggtttgacgtccaaatgattttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcataac 16417977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 13953300 - 13953208
Alignment:
Q  28 caaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    ||||||||||| ||||||||||||||||||| | | |||| |||||||| |||||||||||||||||  || ||| ||| |||| ||||||||    
T  13953300 caaatttcatcaattaattcacaagtaagttatattcttcatatttacaagcaatgtagtttgtttaaggttttattttacatatttttgagc 13953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 1804864 - 1804814
Alignment:
Q  66 tcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1804864 tcctatttacatgcaatgtagtttgtttagggtgctagttttcataatttt 1804814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 31592603 - 31592672
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  31592603 tcacaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtta-ttttcataatttt 31592672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 3938920 - 3938980
Alignment:
Q  256 cactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgaga 316  Q
    ||||| |||||||  ||||||||||||||| |||| |||||||||||||||||||||||||    
T  3938920 cactaattgtgctagtaatttagaatgcacttaaggtgtttgatgaaatgcctaagtgaga 3938980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 313
Target Start/End: Complemental strand, 28510449 - 28510321
Alignment:
Q  185 gtattgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgca 284  Q
    ||||||||  |||||||||||||| |||| ||||   |||||| |  ||||   ||||| ||| |||||||||||| ||||| |  ||||||||||||||    
T  28510449 gtattgttgttgctggaattgttgattagagtaagtataggtacaccgtagttgtttagatgttcaaataacactaattgtgttagtaatttagaatgca 28510350  T
Q  285 cataagatgtttgatgaaatgcctaagtg 313  Q
    | |||| ||||| ||||||||||||||||    
T  28510349 cttaaggtgtttcatgaaatgcctaagtg 28510321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 31592809 - 31592884
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  31592809 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaaccttgcttt 31592884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 17733886 - 17733817
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||||||||||||| |||||||| |||||| |||| ||||||||    
T  17733886 tcacaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtta-ttttaataatttt 17733817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 41957980 - 41958030
Alignment:
Q  66 tcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  41957980 tcctatttagatgcaatgtagtttgtttagggtgctagttttcataatttt 41958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 17733680 - 17733605
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  17733680 taacactaattgtgctagtattttgaaatgcacataaggtgattgatgaaatgtctaagtgagaaaatcttgcttt 17733605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2393310 - 2393260
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttaga 96  Q
    ||||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  2393310 tcacaagtaagtcattttcttcctatttacatgcaatgtagcttgtttaga 2393260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 8469110 - 8469048
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| ||| ||||||||| |||  |||| |||||||||| ||||||||||||||||    
T  8469110 tttctaatgacgttggtttgacttcaaaaggatttatagaacttgagttatgatcaaattact 8469048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 328
Target Start/End: Original strand, 45414717 - 45414795
Alignment:
Q  250 aaataacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    ||||||||||| |||||||  || |||| ||||||| |||  ||||||||||||||||||||||| | ||| |||||||    
T  45414717 aaataacactaattgtgctagtattttaaaatgcacttaaagtgtttgatgaaatgcctaagtgaaataatcttgcttt 45414795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 11409505 - 11409457
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgttta 94  Q
    ||||||||||||||||| ||| | ||||||||||||||||| |||||||    
T  11409505 tcacaagtaagttcttttctttcgatttacatgcaatgtaggttgttta 11409457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 15081627 - 15081691
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| |||||||||| ||||| ||||||||||    
T  15081627 gctttctaatgccgttggtttgacttcaaaagaatttatagaacttgagttatggtcaaattact 15081691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 387
Target Start/End: Original strand, 14156671 - 14156734
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattac 387  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| |||||||||||||||    
T  14156671 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgacttatgatcaaattac 14156734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 28510583 - 28510512
Alignment:
Q  49 caagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataattttgagc 120  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||| |  ||| ||| | |||||||||||    
T  28510583 caagtaagtcattttcttcctatttacatgcaatgtaggttgtttagggctttattttacttaattttgagc 28510512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 45414538 - 45414584
Alignment:
Q  69 tatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||    
T  45414538 tatttacacgcaatgtagtttgtttagggtgtta-ttttcataatttt 45414584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 16108492 - 16108542
Alignment:
Q  342 tttgacttccaaataatttttagaacttgaattatgatcaaattactacac 392  Q
    ||||||||| |||| |||| |||||||||| ||||| ||||||||||||||    
T  16108492 tttgacttcaaaatgatttatagaacttgagttatggtcaaattactacac 16108542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 8940656 - 8940592
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  8940656 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 8940592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 384
Target Start/End: Complemental strand, 16214061 - 16214001
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaat 384  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||    
T  16214061 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaat 16214001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 24702605 - 24702541
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  24702605 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 24702541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 24705052 - 24704988
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  24705052 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 24704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 29796987 - 29796923
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| ||||||||||  |||| ||||||||||    
T  29796987 gctttctaatgccgttggtttgacttcaaaagaatttatagaacttgagctatggtcaaattact 29796923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 29800806 - 29800742
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| ||||||||||  |||| ||||||||||    
T  29800806 gctttctaatgccgttggtttgacttcaaaagaatttatagaacttgagctatggtcaaattact 29800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 12526 - 12636
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| |||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12526 gctttctaatggctttgggttgacttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 12625  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  12626 cataacttttt 12636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 30534 - 30424
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30534 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 30435  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  30434 cataacttttt 30424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 79; Significance: 9e-37; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 45512 - 45402
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  45512 gctttctaatggctttggttttacttccaaataatttttagaacttgagttatgatcaaattactacacatgggtcatgtggattttcgtgaaaacttat 45413  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  45412 cataacttttt 45402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 40029 - 39919
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  40029 gctttctaatggctttggttttacttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggattttcgtgaaaacttat 39930  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  39929 cataacttttt 39919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 79067 - 78957
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||  ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  79067 gctttctaattgctttggtttgacatccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaaattat 78968  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  78967 cgtaacttttt 78957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 9e-37; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 15320034 - 15320144
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15320034 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 15320133  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  15320134 cataacttttt 15320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 15500403 - 15500513
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15500403 gctttctaatggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 15500502  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  15500503 cataacttttt 15500513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 29759493 - 29759383
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  29759493 gctttctaatggctttggtttgacttccaaatgatttttagaacttgagttatgatcaaattactaaacatgggtcatgtggatttttgtgaaaacttat 29759394  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  29759393 cataacttttt 29759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 24717758 - 24717866
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  24717758 tttctaatgcctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttatcg 24717857  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  24717858 taacttttt 24717866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 13663134 - 13663244
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13663134 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 13663233  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  13663234 cataacttttt 13663244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 17150661 - 17150771
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| || ||||||||||| ||||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  17150661 gctttctaatggctttggttggacttccaaatgatttttagaacttgagttatgattaaattactacacatggatcatgtggatttttgtgaaaacttat 17150760  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  17150761 cataacttttt 17150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22089418 - 22089528
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| || || ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22089418 gctttctaatggctttggtttgacgtccaaatgatattaagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 22089517  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  22089518 cataacttttt 22089528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 22147029 - 22146931
Alignment:
Q  336 ctttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  22147029 ctttggtttgacgtccaaataatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttaccataacttttt 22146931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 223350 - 223460
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  223350 gctttctaatggccttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 223449  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  223450 cataacttttt 223460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 736973 - 737083
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  736973 gctttctaatggccttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 737072  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  737073 cataacttttt 737083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 860868 - 860978
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  860868 gctttctaatggccttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 860967  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  860968 cataacttttt 860978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 18612004 - 18611906
Alignment:
Q  336 ctttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  18612004 ctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttagcataacttttt 18611906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 22007131 - 22007241
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22007131 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 22007230  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  22007231 cgtaacttttt 22007241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 688121 - 688226
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  688121 gctttctaatggccttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 688220  T
Q  423 cataac 428  Q
    ||||||    
T  688221 cataac 688226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 39114477 - 39114369
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||     
T  39114477 tttctaatggctttggtttgacatccaaatgatttttagaacttgagttatgatcagattactacacatgagtcatgtagatttttgtgaaaacttatcg 39114378  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  39114377 taacttttt 39114369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 272209 - 272319
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  272209 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 272308  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  272309 cataacttttt 272319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 643640 - 643530
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  643640 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 643541  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  643540 cataacttttt 643530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 829446 - 829336
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  829446 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 829347  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  829346 cataacttttt 829336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 18618894 - 18618784
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||| | ||||||| |||||||||||||||  |||||| |||||||||||||||| |||||| ||||||||| |||||||||    
T  18618894 gctttctaatggctttggtttgccgtccaaatgatttttagaacttgagatatgattaaattactacacatggatcatgtggatttttgtaaaaacttat 18618795  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  18618794 cataacttttt 18618784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 1550818 - 1550906
Alignment:
Q  27 ccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  1550818 ccaaatttcatcaat-aattcacaagtaagttattttcttcctatttacatgcaatgtagattgtttagggtattagttttcataatttt 1550906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 357 - 433
Target Start/End: Original strand, 699796 - 699873
Alignment:
Q  357 atttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  699796 atttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcataacttttt 699873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 44119249 - 44119153
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| ||||| |||| || | ||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  44119249 atttgagccaactttcttcaagtaattaacaagtaagttattttcttcctatttacatgcaatgtaggttgtttagggtgttagttttcatagtttt 44119153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 8319202 - 8319142
Alignment:
Q  268 tcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  8319202 tcctaatttagaatgcacgtaaggtgtttgatgaaatgtctaagtgagaaaatgttgcttt 8319142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 23877952 - 23878014
Alignment:
Q  54 aagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  23877952 aagttcttttcttcctatttacatgcaatgtagattgtttagggtgttagtttttataatttt 23878014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 316
Target Start/End: Complemental strand, 23718349 - 23718255
Alignment:
Q  222 taggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgaga 316  Q
    |||||| |||||||   ||||| ||| |||||||||||| || ||||||||||||| |||| || |||| |||||||||||||||||||| ||||    
T  23718349 taggtacaatgtagttgtttagatgttcaaataacactaattatgctcctaatttaaaatgtacttaaggtgtttgatgaaatgcctaagagaga 23718255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 20495144 - 20495069
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  20495144 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgaggaaatcttgcttt 20495069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 20495350 - 20495281
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || | ||||||||||||||||||||| |||||||| |||||| | |||||||||||    
T  20495350 tcacaagtaagtacctttcctcctatttacatgcaatgtaggttgtttagggtgtta-tattcataatttt 20495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 14397526 - 14397590
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  14397526 gctttctaatgtcgttggtttgacttcaaaatgatttgtagaacttgagttatggtcaaattact 14397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 21551360 - 21551296
Alignment:
Q  250 aaataacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtga 314  Q
    |||||||||||  ||||||  |||||| ||||||||  ||| |||||||||||||||||||||||    
T  21551360 aaataacactaactgtgctagtaatttggaatgcactcaaggtgtttgatgaaatgcctaagtga 21551296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 21552406 - 21552342
Alignment:
Q  250 aaataacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtga 314  Q
    |||||||||||  ||||||  |||||| ||||||||  ||| |||||||||||||||||||||||    
T  21552406 aaataacactaactgtgctagtaatttggaatgcactcaaggtgtttgatgaaatgcctaagtga 21552342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 24048987 - 24048923
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| |||||||||| ||||| ||||||||||    
T  24048987 gctttctaatgtcgttggtttgacttcaaaacaatttatagaacttgagttatggtcaaattact 24048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 42100549 - 42100498
Alignment:
Q  64 cttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||||||||||||||||||| || ||||| |||||| |||||||||||||    
T  42100549 cttcctatttacatgcaatgtaggttatttagggtgtta-ttttcataatttt 42100498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 44118999 - 44118955
Alignment:
Q  282 gcacataagatgtttgatgaaatgcctaagtgagaaaatgttgct 326  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||    
T  44118999 gcacaaaaggtgtttgatgaaatgcctaagtgagaaaatcttgct 44118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 42100360 - 42100301
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagt 312  Q
    |||||||| |||||||  || |||  |||||||||||| |||||||||||||||||||||    
T  42100360 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagt 42100301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 23718522 - 23718453
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||| ||||| | || ||||||||||||||||||||||| |||||||| ||  || |||||||||||||    
T  23718522 tcacaaataagtacctttcttcctatttacatgcaatgtaggttgtttagggttgta-ttttcataatttt 23718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 15202771 - 15202835
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    |||||||||||   ||| ||||||||| ||| ||||| |||||||||| ||||| ||||||||||    
T  15202771 gctttctaatgctattggtttgacttcaaaagaatttatagaacttgagttatggtcaaattact 15202835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 15202964 - 15203028
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| |||||||||| ||||  ||||||||||    
T  15202964 gctttctaatgccgttggtttgacttcaaaagaatttatagaacttgagttatagtcaaattact 15203028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 19896891 - 19896827
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  19896891 gctttctaatgccgttggtttgacttcaaaacgatttatagaacttgagttatggtcaaattact 19896827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 22002129 - 22002065
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| ||| ||||| |||||||||| ||||  ||||||||||    
T  22002129 gctttctaatgtcgttggtttgacttcaaaagaatttatagaacttgagttatagtcaaattact 22002065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 32122105 - 32122041
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||  ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  32122105 gctttctaatgccgttagtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 32122041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 45290427 - 45290491
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  45290427 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 45290491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 324 - 428
Target Start/End: Complemental strand, 974 - 869
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  974 gctttctaatggctttggtttgacttccaaatgatttttataacttgaattatgatcaaattattacacatgggtcatgtgcatttttgtgaaaacttat 875  T
Q  423 cataac 428  Q
    ||||||    
T  874 cataac 869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 8630 - 8520
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8630 gctttctaatggctttggtttgacttctagatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 8531  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  8530 cataacttttt 8520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 6241 - 6351
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  6241 gctttctaatggctttggtttgacttctaaatgatttttagaacttgagttatgatcaaattactacacatgggtaatgtggatttttgtgaaaacttat 6340  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  6341 cataacttttt 6351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 32152 - 32262
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32152 gctttctaatggctttggtttaacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 32251  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  32252 cataacttttt 32262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 28257 - 28183
Alignment:
Q  254 aacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    ||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  28257 aacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaatcttgcttt 28183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 28464 - 28395
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  28464 tcacaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtta-ttttcataatttt 28395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 40692 - 40582
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| ||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40692 gctttctaatggctttggtttaacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 40593  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  40592 cataacttttt 40582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 44380 - 44449
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  44380 tcacaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtta-ttttcataatttt 44449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 44587 - 44661
Alignment:
Q  254 aacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    ||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  44587 aacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaatcttgcttt 44661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 21858656 - 21858546
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||| | ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21858656 gctttctaacggctttggtttgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 21858557  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  21858556 cataacttttt 21858546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 44035864 - 44035975
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtga--tttttgtgaaaactta 421  Q
    ||||||||||| ||||| |||||| ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  44035864 gctttctaatggctttggtttgacgtccaaatgatttttataacttgagttatgatcaaattactacacatgggtcatgtgaattttttgtgaaaactta 44035963  T
Q  422 tcataacctttt 433  Q
    ||||||| ||||    
T  44035964 tcataacttttt 44035975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 22366591 - 22366481
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||||||||| |||||| || |||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  22366591 gctttctaatgactttggtttgacatcgaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 22366492  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  22366491 cataacttttt 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 18060620 - 18060730
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| ||||| | |||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  18060620 gctttctaatggctttggtttgacgtccaaatgattttaaaaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttat 18060719  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  18060720 cataacttttt 18060730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 7641618 - 7641715
Alignment:
Q  337 tttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7641618 tttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcataacttttt 7641715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 15862088 - 15862196
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||| | |||||  ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  15862088 tttctaatggcttgggtttgatgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatca 15862187  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  15862188 taacttttt 15862196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 21650915 - 21651019
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatg-tgatttttgtgaaaacttat 422  Q
    ||||||||||| | ||| |||||| ||||||| ||||||| |||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  21650915 gctttctaatggccttggtttgacgtccaaatgatttttaaaactagagttatgatcaaattactacacatgggtcatgcggatttttgtgaaaacttat 21651014  T
Q  423 cataa 427  Q
    |||||    
T  21651015 cataa 21651019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31385552 - 31385648
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| |||||||||| || | ||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  31385552 atttgagccaaatttcttcaagtaattaacaagtaagttattttcttcctatttacatgcaatgtaggttgtttagggtgttagttttcataatttt 31385648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 17003973 - 17003863
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  17003973 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 17003874  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  17003873 cataacttttt 17003863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 42465181 - 42465085
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||| |||||||| || | ||||| ||||||||||| ||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  42465181 atttgcgtcaaatttcttcaagtaattaacaagtaagttattttcttcctatttacatgaaatgtaggttgtttagggtgttagttttcataatttt 42465085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 326 - 427
Target Start/End: Complemental strand, 22029877 - 22029775
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatg-tgatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||  | ||||| |||||| |||||||| |||||||||||||| |||||||| ||||||  |||||||||||||||||||||    
T  22029877 tttctaatggctttggtttgatatacaaatgattttttgaacttgagttatgatcaaattaatacacatgagtcatgaggatttttgtgaaaacttatca 22029778  T
Q  425 taa 427  Q
    |||    
T  22029777 taa 22029775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 15292401 - 15292326
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  15292401 taacactaattgtgctagtattttaaaatgcacttaaggtgtttgatgaaatgcctaagtgagaaaatattgcttt 15292326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 433
Target Start/End: Complemental strand, 20253919 - 20253812
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttatcat 425  Q
    |||||||| |||||||||| | | |||| ||||||||  |||||| ||||||  || ||| |||||||||| |||||| |||||||||||||||||||||    
T  20253919 ttctaatggctttgatttggcattcaaacaatttttatgacttgagttatgactaatttattacacatgggacatgtggatttttgtgaaaacttatcat 20253820  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  20253819 aacttttt 20253812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 42464948 - 42464873
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  42464948 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaatcttgcttt 42464873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 46200993 - 46200924
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  46200993 tcacaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtta-ttttcataatttt 46200924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 18239915 - 18239987
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgc 325  Q
    |||||||| |||||||  || |||  |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  18239915 taacactaattgtgctagtattttgaaatgcacataaggtgtttgatgaaatgcctaagtgagaaaatcttgc 18239987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 42058247 - 42058172
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  ||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  42058247 taacactaattgtgctagtattttgaaatgcacttaaggtgtttgatgaaatgcctaagtgagaaaatattgcttt 42058172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 13706360 - 13706425
Alignment:
Q  50 aagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||||||| |||  || |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  13706360 aagtaagttattttgtttctatttacatgcaatgtagtttgtttagggtgtta-ttttcataatttt 13706425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 22035028 - 22034926
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatt-tttgtgaaaacttatca 424  Q
    |||||||| ||||| |||||  | ||||| ||||||||||||||  ||| |||||||||| |||||||| || |||| |||| |||||||||||||||||    
T  22035028 ttctaatggctttggtttgatattcaaatgatttttagaacttgggttaggatcaaattaatacacatgagttatgtggattctttgtgaaaacttatca 22034929  T
Q  425 taa 427  Q
    |||    
T  22034928 taa 22034926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 433
Target Start/End: Original strand, 22249665 - 22249718
Alignment:
Q  381 aaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  22249665 aaattactacacatgggtcatgtggatttttgtgaaaacttatcgtaacttttt 22249718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 15292632 - 15292537
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| |||||||||  || | ||||| ||||||||||| |||  ||  |||||||||||| |||||||||||||| |||||| |||||||||||||    
T  15292632 atttgagccaaatttgttcaagtaattaacaagtaagttattttatttttatttacatgcattgtagtttgtttagggtgtta-ttttcataatttt 15292537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 401
Target Start/End: Original strand, 38056031 - 38056075
Alignment:
Q  357 atttttagaacttgaattatgatcaaattactacacatgggtcat 401  Q
    |||||||||||| || |||||||||||||||||||||||||||||    
T  38056031 atttttagaactcgagttatgatcaaattactacacatgggtcat 38056075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 31385785 - 31385852
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaat 320  Q
    |||||||| |||||||  || |||  ||| |||||||| |||||||||||||||||||||||||||||    
T  31385785 taacactaattgtgctagtattttgaaattcacataaggtgtttgatgaaatgcctaagtgagaaaat 31385852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 42058478 - 42058388
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcata 111  Q
    ||||| |||||||||  || | ||||| ||||||||||| |||  || |||||||||||||| |||||||||||||||| ||| ||||||||    
T  42058478 atttgagccaaatttgttcaagtaattaacaagtaagttattttatttctatttacatgcaacgtagtttgtttagagtatta-ttttcata 42058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 27108913 - 27108852
Alignment:
Q  20 atttgcgccaaatttcatccattaattcacaagtaagttctttccttcctatttacatgcaa 81  Q
    ||||| |||||||||| || | ||||| ||||||||||| ||| ||||||||||||||||||    
T  27108913 atttgagccaaatttcttcaagtaattaacaagtaagttattttcttcctatttacatgcaa 27108852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 27161372 - 27161436
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  27161372 gctttctaatgtcgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 27161436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 29535428 - 29535360
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacac 392  Q
    |||||||| || | ||| ||||||||| ||| ||||| |||||||||| ||||| ||||||||||||||    
T  29535428 gctttctagtgtcgttggtttgacttcaaaagaatttatagaacttgagttatggtcaaattactacac 29535360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 46200787 - 46200712
Alignment:
Q  253 taacactagttgtgctcctaatttagaatgcacataagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||||||| |||||||  || |||  ||||||| | |||||||||||||||||||||||||| | ||| |||||||    
T  46200787 taacactaattgtgctagtattttgaaatgcactttagatgtttgatgaaatgcctaagtgaaataatcttgcttt 46200712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 13227240 - 13227172
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacac 392  Q
    |||||||| || | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||||||    
T  13227240 gctttctagtgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattactacac 13227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 21841143 - 21841079
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||  ||||||||||    
T  21841143 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatagtcaaattact 21841079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 31612935 - 31612871
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  31612935 gctttctaatgccgttggtttgacttcaaaacgatttatagaacttgagttatggtcaaattact 31612871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 15840 - 15732
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||     
T  15840 tttctaatggctttggtttgacttccaaatgatttttagaacttgagttatgatcaaattaatacacatgggtcatgtggatttttgtgaaaacttatcg 15741  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  15740 taacttttt 15732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 2011 - 1913
Alignment:
Q  336 ctttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2011 ctttggtttgacgtccaaattatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttatcataacttttt 1913  T

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Target: scaffold0266 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 789 - 679
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| | |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  789 gctttctaatggctttggtctgacgtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtaatgtggatttttgtgaaaacttat 690  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  689 cataacttttt 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 110110 - 110220
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||| |||||||    
T  110110 gctttctaatggctttgatttgacatccaaatgatttttagaacttgagttatgatcaaattactacacttgggtcatgtggctttttgtgataacttat 110209  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  110210 cataacttttt 110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 118611 - 118721
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||| |||||||    
T  118611 gctttctaatggctttgatttgacatccaaatgatttttagaacttgagttatgatcaaattactacacttgggtcatgtggctttttgtgataacttat 118710  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  118711 cataacttttt 118721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 324 - 428
Target Start/End: Original strand, 1301 - 1406
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    |||||||||||  |||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1301 gctttctaatggttttggtttgatttccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttat 1400  T
Q  423 cataac 428  Q
    | ||||    
T  1401 cgtaac 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 28531 - 28423
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| ||||| |||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  28531 tttctaatggctttggtttgacgtccaaatgatttttataacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttatcg 28432  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  28431 taacttttt 28423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 41319 - 41211
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatca 424  Q
    ||||||||| |||||  ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  41319 tttctaatggctttggcttgacttccaaattatttttagaacttgcattatgatcaaattaatacacatgggtcacgtggatttttgtgaaaacttatca 41220  T
Q  425 taacctttt 433  Q
    |||| ||||    
T  41219 taacttttt 41211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 154897 - 155001
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||| ||||||| ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  154897 gctttataatgacgttggtttgaggtccaaatcatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 154996  T
Q  423 cataa 427  Q
    |||||    
T  154997 cataa 155001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 17225 - 17289
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  17225 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 17289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 932 - 822
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| | ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  932 gctttctaatggctttggtttgacgtgcaaatgatttttagaacctgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 833  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  832 cgtaacttttt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 1439 - 1329
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  1439 gctttctaatggctttggtttgacgtccaaatgagttttagaacttgagttatgatcaaattactacacatgggtcatatgaatttttatgaaaacttat 1340  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  1339 cataacttttt 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 433
Target Start/End: Original strand, 19945 - 20055
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttat 422  Q
    |||||| |||| ||||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19945 gctttccaatggctttggtttgaagtccaaatgatttttagaacttgagttatgatcaaattactacacatgggtcatgtggatttttgtgaaaacttat 20044  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  20045 cgtaacttttt 20055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 328 - 428
Target Start/End: Original strand, 8132 - 8233
Alignment:
Q  328 tctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcata 426  Q
    ||||||| ||||| |||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8132 tctaatggctttggtttgacgtccaaatgatttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcata 8231  T
Q  427 ac 428  Q
    ||    
T  8232 ac 8233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 37923 - 37820
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    |||||| |||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  37923 gctttcaaatggctttggtttgacttccaaatgatttt-agaacttgagttatgatcaaattactacacataggtcatgtgaatttttgtgaaaacttat 37825  T
Q  423 cataa 427  Q
    |||||    
T  37824 cataa 37820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 18269 - 18159
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| ||||| |||||  ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  18269 gctttctaatggctttggtttgaggtccaaatgatttttataacttgagttatgatcaaattactacacatgggtcatttgtatttttgtgaaaacttat 18170  T
Q  423 cataacctttt 433  Q
    | |||| ||||    
T  18169 cgtaacttttt 18159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 328
Target Start/End: Original strand, 623 - 763
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    ||||||||||||  ||||||||||||| ||||  |||| || |||||||   ||||| ||| |||||||||||| |||||||  |||||||||||||||     
T  623 attgtttatgcta-aattgttgtttagagtaagtgtagttacaatgtagttgtttagatgttcaaataacactaattgtgctagtaatttagaatgcact 721  T
Q  287 taagatgtttgatgaaatgcctaagtgagaaaatgttgcttt 328  Q
    |||| ||||||||||||||||||| ||||||||| |||||||    
T  722 taaggtgtttgatgaaatgcctaaatgagaaaatcttgcttt 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 433
Target Start/End: Complemental strand, 38439 - 38329
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgtg-atttttgtgaaaacttat 422  Q
    ||||||||||| | ||| ||| |  ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  38439 gctttctaatggcgttggtttcaggtccaaatgatttttagaactcgagttatgatcaaattactacacatgggtcatgtgaatttttgtgaaaacttag 38340  T
Q  423 cataacctttt 433  Q
    |||||| ||||    
T  38339 cataacttttt 38329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 54009 - 53916
Alignment:
Q  325 ctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaa 417  Q
    |||||||||| ||||| |||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||    
T  54009 ctttctaatggctttggtttgactttcaaatgatttttagaacttgagttatgattaaattactacacatgggtcatgtggattattgtgaaaa 53916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 316
Target Start/End: Complemental strand, 86591 - 86463
Alignment:
Q  187 attgtttatgctggaattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcaca 286  Q
    |||||||||||| |||||||||||||| ||||  ||||  | |||||||   ||||| ||| |||||||||||| |||||||  |||||||||||||||     
T  86591 attgtttatgctagaattgttgtttagagtaagtgtagacacaatgtagttgtttagatgttcaaataacactaattgtgctagtaatttagaatgcact 86492  T
Q  287 taagatgtttgatgaaatgcctaagtgaga 316  Q
    |||| ||||| |||||||||||||||||||    
T  86491 taaggtgttt-atgaaatgcctaagtgaga 86463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 86763 - 86660
Alignment:
Q  18 gaatttgcgccaaatttcatccattaattcacaagtaag-----ttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataa 112  Q
    ||||||| ||| |||||| || |||||||||||||||||     |||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  86763 gaatttgagcccaatttcttcaattaattcacaagtaagctcttttcttttcttcctatttacatacaatgtaggttgtttagggtgttagttttcataa 86664  T
Q  113 tttt 116  Q
    ||||    
T  86663 tttt 86660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 6782 - 6689
Alignment:
Q  337 tttgatttgacttccaaataattttt-agaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataac 428  Q
    |||| |||||| ||||||| |||||| |||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6782 tttggtttgacgtccaaatgattttttagaacttgagatatgattaaattactacacatgggtcatgtggatttttgtgaaaacttatcataac 6689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 427
Target Start/End: Complemental strand, 6153 - 6076
Alignment:
Q  351 caaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataa 427  Q
    ||||| ||||||||||||||| |||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||    
T  6153 caaatgatttttagaacttgagttatgatcaaattaatatacatgagtcatgtggatttttgtgaaaacttatcataa 6076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 358 - 433
Target Start/End: Original strand, 167168 - 167243
Alignment:
Q  358 tttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcataacctttt 433  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||    
T  167168 tttttagaacttgagttatgatcaaattactacacacgggtcatgtggatttttgtg-aaacttatcataacttttt 167243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 433
Target Start/End: Original strand, 11015 - 11122
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcat 425  Q
    |||||||| ||||| |||| ||| ||||| ||||||| ||||| | ||||||  || |||||||||||||||||||| ||||||||| ||||||||||||    
T  11015 ttctaatggctttggtttggctttcaaatgatttttataacttaagttatgaataatttactacacatgggtcatgtggatttttgttaaaacttatcat 11114  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  11115 aacttttt 11122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 315
Target Start/End: Complemental strand, 140581 - 140467
Alignment:
Q  201 aattgttgtttagtgtaaaagtaggtataatgtagccctttaggtgtacaaataacactagttgtgctcctaatttagaatgcacataagatgtttgatg 300  Q
    ||||||||||| | |  || ||||||| ||||||||||||||  ||| |||||||||||| || ||||| ||||||| |||||||||||| ||||||||     
T  140581 aattgttgttttgagacaatgtaggtacaatgtagccctttaaatgttcaaataacactaattatgctcttaatttaaaatgcacataaggtgtttgata 140482  T
Q  301 aaatgcctaagtgag 315  Q
    |||||  ||||||||    
T  140481 aaatgtataagtgag 140467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 6975 - 7046
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatg 395  Q
    ||||||||||| | ||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6975 gctttctaatggcgttggtttgaggtccaaatgatttttagaacttgagttatgatcaaattactacacatg 7046  T

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Target: scaffold1813 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1813
Description:

Target: scaffold1813; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 678 - 605
Alignment:
Q  42 taattcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    ||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  678 taattaacaagtaagttattttctttctatttacatgcaatgtagtttgtttaggatgtta-ttttcataatttt 605  T

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Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 1872 - 1803
Alignment:
Q  46 tcacaagtaagttctttccttcctatttacatgcaatgtagtttgtttagagtgttagttttcataatttt 116  Q
    |||||||||||| | || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  1872 tcacaagtaagtacctttcttcctatttacatgcaatgtaggttgtttagggtgtta-ttttcataatttt 1803  T

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Target: scaffold0251; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 1640 - 1599
Alignment:
Q  279 aatgcacataagatgtttgatgaaatgcctaagtgagaaaat 320  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  1640 aatgcacataaggtgtttgatgaaatgcctaagtgcgaaaat 1599  T

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Target: scaffold0761 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 433
Target Start/End: Original strand, 2272 - 2379
Alignment:
Q  327 ttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcatgt-gatttttgtgaaaacttatcat 425  Q
    |||||||| ||||| | |||| | ||||| ||||||| ||||| | ||||||  || |||||| |||||| |||||| ||||||||||||||||||||||    
T  2272 ttctaatggctttggtctgacattcaaatgatttttataacttcagttatgaataatttactatacatggatcatgtagatttttgtgaaaacttatcat 2371  T
Q  426 aacctttt 433  Q
    ||| ||||    
T  2372 aacttttt 2379  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 34802 - 34876
Alignment:
Q  357 atttttagaacttgaattatgatcaaattactacacatgggtcatgtga---tttttgtgaaaacttatcataac 428  Q
    ||||||| ||||||| ||||||| || |||||||||||| ||||| |||   |||||||||||||||||||||||    
T  34802 atttttataacttgagttatgattaatttactacacatgtgtcatttgaatttttttgtgaaaacttatcataac 34876  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 501442 - 501378
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||||||||||||||    
T  501442 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatgatcaaattact 501378  T

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Target: scaffold0747 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 966 - 889
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcat 401  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| |||||||||| ||| | ||||||    
T  966 gctttctaatgccgttggtttgacttcaaaattatttatagaacttgagttatggtcaaattactgcacgtaggtcat 889  T

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Target: scaffold1792 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 584 - 520
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  584 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 520  T

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Target: scaffold0741 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 400
Target Start/End: Original strand, 4088 - 4164
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtca 400  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| |||||||||| ||| |||||||    
T  4088 gctttctaatgtcgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattactgcacgtgggtca 4164  T

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Target: scaffold0230 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 23316 - 23380
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||||||||| ||||| ||||||||||    
T  23316 gctttctaatgccgttggtttgacttcaaaatgatttatagaacttgagttatggtcaaattact 23380  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 113391 - 113328
Alignment:
Q  326 tttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattacta 389  Q
    ||||||||||| ||| ||||||| | |||| | ||||||||||||| ||||| |||||||||||    
T  113391 tttctaatgacgttggtttgactccaaaatgagttttagaacttgagttatggtcaaattacta 113328  T

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Target: scaffold0574 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 6828 - 6751
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacacatgggtcat 401  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| |||||||||| ||| | ||||||    
T  6828 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattactgcacgtaggtcat 6751  T

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Target: scaffold1427 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 1805 - 1741
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  1805 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 1741  T

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Target: scaffold0494 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 309 - 373
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  309 gctttctaatgccgttggtttgacttcaaaaagatttatagaacttgagttatggtcaaattact 373  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 3400 - 3336
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  3400 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 3336  T

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Target: scaffold0254 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 21124 - 21060
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||    
T  21124 gctttctaatgccgttggtttgacttcaaaaggatttatagaacttgagttatggtcaaattact 21060  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 38441 - 38505
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattact 388  Q
    ||||||||||| | ||| ||||||||| |||| |||| ||||| |||| ||||| ||||||||||    
T  38441 gctttctaatgtcgttggtttgacttcaaaatgatttatagaatttgagttatgttcaaattact 38505  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 68338 - 68270
Alignment:
Q  324 gctttctaatgactttgatttgacttccaaataatttttagaacttgaattatgatcaaattactacac 392  Q
    |||||||| || | ||| ||||||||| |||  |||| |||||||||| ||||| ||||||||||||||    
T  68338 gctttctagtgccattggtttgacttcaaaaggatttatagaacttgagttatggtcaaattactacac 68270  T

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