View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4928_high_28 (Length: 258)
Name: NF4928_high_28
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4928_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 46933512 - 46933711
Alignment:
| Q |
40 |
agataattgaaatttacaggtgtggaaagacaatggtctaagatgaattgttgaacttgttccgtaattgagccttcgccgcacgccctaaattgaaatt |
139 |
Q |
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| T |
46933512 |
agataattgaaatttacaggtgtggaaagacaatggtctaagatgaattgttgaacttgttccgtaattgagccttcgccgcacgccctaaattgaaatt |
46933611 |
T |
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| Q |
140 |
gcataagctaagtattattgcagttaaacttaaatatatttgttaatgaaaacagaaagagaagagaaagtgtacttggcatgggagattaagcagtagg |
239 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
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| T |
46933612 |
gcataagctaagtattattgcagttaaacttaaatatatttgttaacgaaaacagaaagagaagagaaagtttacttggcatgtgagattaagcagtagg |
46933711 |
T |
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