View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4928_high_43 (Length: 214)

Name: NF4928_high_43
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4928_high_43
NF4928_high_43
[»] chr7 (27 HSPs)
chr7 (22-205)||(18258820-18259003)
chr7 (18-205)||(47166556-47166743)
chr7 (18-205)||(34128992-34129179)
chr7 (25-205)||(19231314-19231493)
chr7 (18-205)||(10668598-10668784)
chr7 (18-205)||(28130980-28131167)
chr7 (19-205)||(41680665-41680850)
chr7 (18-205)||(8465418-8465604)
chr7 (25-205)||(18139036-18139214)
chr7 (25-205)||(48808194-48808372)
chr7 (18-205)||(19393123-19393310)
chr7 (25-205)||(2204978-2205156)
chr7 (25-205)||(18400530-18400708)
chr7 (25-205)||(18407514-18407692)
chr7 (18-205)||(16011860-16012047)
chr7 (25-205)||(15730177-15730355)
chr7 (18-198)||(24443081-24443261)
chr7 (25-204)||(30254564-30254741)
chr7 (18-205)||(18257263-18257449)
chr7 (18-205)||(15168991-15169176)
chr7 (18-107)||(14592269-14592360)
chr7 (67-205)||(31190102-31190241)
chr7 (25-93)||(31190248-31190316)
chr7 (26-205)||(25845220-25845399)
chr7 (26-205)||(19388986-19389166)
chr7 (20-87)||(12409948-12410015)
chr7 (18-128)||(5982483-5982595)
[»] chr5 (17 HSPs)
chr5 (18-205)||(9811429-9811616)
chr5 (18-205)||(7865126-7865313)
chr5 (18-204)||(12703571-12703757)
chr5 (18-205)||(12764686-12764873)
chr5 (18-205)||(20941446-20941632)
chr5 (18-205)||(26245520-26245707)
chr5 (18-205)||(22941669-22941856)
chr5 (18-205)||(25805082-25805268)
chr5 (18-205)||(31097235-31097421)
chr5 (25-205)||(32325-32503)
chr5 (25-205)||(12789361-12789539)
chr5 (25-205)||(23546348-23546526)
chr5 (18-204)||(39535610-39535796)
chr5 (25-205)||(24933004-24933182)
chr5 (25-205)||(5098076-5098254)
chr5 (18-205)||(31651476-31651664)
chr5 (18-205)||(20099941-20100127)
[»] chr4 (25 HSPs)
chr4 (18-205)||(4546481-4546668)
chr4 (18-205)||(9487965-9488153)
chr4 (18-205)||(34975970-34976157)
chr4 (18-205)||(30040186-30040373)
chr4 (25-205)||(3368721-3368899)
chr4 (25-205)||(2677439-2677617)
chr4 (25-205)||(15815447-15815625)
chr4 (25-205)||(18110741-18110919)
chr4 (25-205)||(26532039-26532217)
chr4 (18-129)||(1942143-1942254)
chr4 (29-205)||(15461931-15462106)
chr4 (25-205)||(5870843-5871021)
chr4 (25-205)||(20244363-20244541)
chr4 (25-205)||(4675681-4675859)
chr4 (25-205)||(18163588-18163766)
chr4 (18-205)||(9538377-9538564)
chr4 (25-205)||(17299657-17299835)
chr4 (18-199)||(19362829-19363009)
chr4 (18-205)||(5616814-5617001)
chr4 (18-205)||(19373765-19373951)
chr4 (18-128)||(11421420-11421530)
chr4 (18-205)||(32636902-32637089)
chr4 (17-75)||(23055889-23055947)
chr4 (163-197)||(5524695-5524729)
chr4 (161-205)||(1942251-1942295)
[»] chr6 (19 HSPs)
chr6 (18-205)||(8613338-8613525)
chr6 (18-205)||(33317284-33317471)
chr6 (18-205)||(18019526-18019712)
chr6 (25-205)||(14074906-14075085)
chr6 (18-205)||(20736026-20736213)
chr6 (25-205)||(27508045-27508223)
chr6 (25-205)||(1585806-1585984)
chr6 (25-205)||(22859586-22859764)
chr6 (25-205)||(27525259-27525437)
chr6 (25-205)||(16789497-16789675)
chr6 (35-205)||(10358751-10358917)
chr6 (18-205)||(19735216-19735402)
chr6 (18-205)||(22559892-22560078)
chr6 (67-205)||(21995426-21995564)
chr6 (25-107)||(19218849-19218931)
chr6 (25-192)||(4074001-4074168)
chr6 (18-92)||(17120315-17120389)
chr6 (18-75)||(21995006-21995063)
chr6 (87-128)||(17119047-17119088)
[»] chr8 (19 HSPs)
chr8 (18-205)||(2962628-2962815)
chr8 (18-205)||(6431305-6431492)
chr8 (25-205)||(22659191-22659370)
chr8 (18-205)||(25611614-25611800)
chr8 (18-205)||(8370950-8371136)
chr8 (18-205)||(21969752-21969938)
chr8 (25-205)||(27007215-27007393)
chr8 (25-205)||(27014358-27014536)
chr8 (18-205)||(26240903-26241090)
chr8 (25-205)||(21917102-21917280)
chr8 (25-205)||(27880185-27880363)
chr8 (25-205)||(28020366-28020544)
chr8 (25-205)||(45533971-45534149)
chr8 (18-205)||(18835764-18835951)
chr8 (18-167)||(12562542-12562692)
chr8 (25-205)||(22130307-22130485)
chr8 (18-205)||(8781571-8781758)
chr8 (18-205)||(20534906-20535093)
chr8 (18-121)||(27098776-27098879)
[»] chr3 (15 HSPs)
chr3 (18-205)||(25978424-25978611)
chr3 (17-205)||(15316872-15317060)
chr3 (18-205)||(11788006-11788193)
chr3 (25-205)||(28088532-28088711)
chr3 (18-205)||(21034657-21034843)
chr3 (18-205)||(21399211-21399397)
chr3 (18-205)||(15846233-15846419)
chr3 (25-205)||(55427447-55427625)
chr3 (25-205)||(12300336-12300514)
chr3 (25-205)||(20147252-20147430)
chr3 (18-199)||(15537954-15538135)
chr3 (25-205)||(14147446-14147625)
chr3 (25-205)||(26816717-26816897)
chr3 (18-75)||(14890810-14890867)
chr3 (17-87)||(30464422-30464491)
[»] chr2 (8 HSPs)
chr2 (18-205)||(24228911-24229098)
chr2 (25-205)||(24249730-24249908)
chr2 (25-205)||(30174803-30174981)
chr2 (18-205)||(19616853-19617040)
chr2 (19-205)||(15341698-15341884)
chr2 (25-205)||(29800897-29801077)
chr2 (18-197)||(24763376-24763555)
chr2 (20-199)||(20687117-20687297)
[»] chr1 (16 HSPs)
chr1 (18-205)||(634357-634544)
chr1 (18-205)||(19706136-19706322)
chr1 (18-205)||(47667182-47667368)
chr1 (18-205)||(28134420-28134606)
chr1 (25-205)||(20390937-20391115)
chr1 (18-205)||(22612911-22613097)
chr1 (18-205)||(43802062-43802248)
chr1 (25-205)||(9456542-9456720)
chr1 (25-205)||(20779343-20779521)
chr1 (25-205)||(42816687-42816865)
chr1 (18-205)||(8728081-8728268)
chr1 (25-205)||(22669955-22670133)
chr1 (48-205)||(14482339-14482494)
chr1 (18-98)||(51997687-51997767)
chr1 (158-205)||(9460771-9460816)
chr1 (25-75)||(29097148-29097198)
[»] scaffold0112 (1 HSPs)
scaffold0112 (18-205)||(602-788)
[»] scaffold0297 (1 HSPs)
scaffold0297 (18-189)||(405-576)
[»] scaffold0086 (1 HSPs)
scaffold0086 (19-199)||(54182-54362)
[»] scaffold0466 (1 HSPs)
scaffold0466 (18-205)||(12646-12833)
[»] scaffold0264 (1 HSPs)
scaffold0264 (25-205)||(3373-3551)
[»] scaffold0028 (1 HSPs)
scaffold0028 (25-205)||(120156-120334)
[»] scaffold0006 (2 HSPs)
scaffold0006 (25-129)||(67146-67250)
scaffold0006 (161-205)||(67105-67149)
[»] scaffold0376 (1 HSPs)
scaffold0376 (18-116)||(11311-11409)
[»] scaffold0111 (1 HSPs)
scaffold0111 (18-173)||(26960-27115)
[»] scaffold0031 (1 HSPs)
scaffold0031 (17-205)||(39684-39873)
[»] scaffold0099 (1 HSPs)
scaffold0099 (25-205)||(9558-9747)
[»] scaffold0375 (1 HSPs)
scaffold0375 (48-108)||(15342-15402)
[»] scaffold0023 (1 HSPs)
scaffold0023 (161-199)||(108826-108864)
[»] scaffold0389 (1 HSPs)
scaffold0389 (121-205)||(685-767)
[»] scaffold0034 (1 HSPs)
scaffold0034 (25-96)||(81611-81683)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 18259003 - 18258820
Alignment:
Q  22 tgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaata 121  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18259003 tgggatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaata 18258904  T
Q  122 aagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18258903 aagatatcgagacaacggagtaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttgtcact 18258820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 47166743 - 47166556
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  47166743 aatatgagatattggacttattcgttattcagtatattttggaatcaagaaatataaacattgatctatacaagggtgacaatatttatgctttgggatc 47166644  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  47166643 aataaagatatcgagacaaaagagtaattgtacacataattattatcatggaaaaggtttcgttagatcacttgacattcttgtcact 47166556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 34128992 - 34129179
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  34128992 aatatgagatattagacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgcattgagatc 34129091  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  34129092 aataaagatatcgagacaaaggagtaattgtaaacataattattatcatggaaaaggtttcgtcatatcacttgacattcttgtcact 34129179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 19231314 - 19231493
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19231314 gatattggacttattcgttattcagtatattttggaatcaagaaatataaatattgatctatacaagggtgacaatatctatgccttgggatcaataaag 19231413  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||| |||| |||||||  ||| | ||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  19231414 atatcgagacaaaagagtaattgtagacatgagtattatcatgg-aaaggttttgtcagatcacttgacattcttgtcact 19231493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 10668784 - 10668598
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  10668784 aatatgagatattggacttattcgttattcaatatatttcggaatcaagaaatataaacattgatctagacaaggatgacaatatctatgccttgggatc 10668685  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    || ||||||||||||||||  ||| |||||||| ||| | ||||||||| ||||| |||||||||||||||  ||||||||| |||||    
T  10668684 aacaaagatatcgagacaaaggagtaattgtacacatgaatattatcat-gaaaaagtttcgtcagatcacaagacattcttgtcact 10668598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 28130980 - 28131167
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  28130980 aatatgagatgttggacttattcgttattcagtatatttcggaatcaagaaatataaatattgatctatacaagggtgacaaaatctatgccttgagatc 28131079  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||| |||  ||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  28131080 aatatagatattaggacaaatgagtaatcatacacataagtattatcatggaaaaggtttcgtcatatcacttgacattcttgtcact 28131167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 41680850 - 41680665
Alignment:
Q  19 atatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatca 118  Q
    ||||| |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  41680850 atatgagatattggacttattcgttatttagtatatttcgtaatcaagaaatataaacattgatctatacaagggtgacaatatctatatcttgggatca 41680751  T
Q  119 ataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||| |||||||  ||| |||||||| ||| | ||||||||||| ||||  ||||||| |||||||||||||||| |||||    
T  41680750 ataaagatatagagacaaaggagtaattgtacacatgagtattatcatgg-aaagtcttcgtcatatcacttgacattcttgtcact 41680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 8465418 - 8465604
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  8465418 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatc 8465517  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||| ||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  8465518 aataaaaggtatcgagacaaaggagtaattatacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 8465604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 18139214 - 18139036
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  18139214 gatattggacttattcgttaaatagtatatttaggaatcaagataaatagacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 18139115  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  18139114 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 18139036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 48808372 - 48808194
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  48808372 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 48808273  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  48808272 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 48808194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 19393310 - 19393123
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||| ||||||  ||||||||||| || |||||||||||||||||| |||||| ||||||||||||| || |||||||||||| ||||    
T  19393310 aatatgagatattggagttattctatattcagtatacttcggaatcaagaaatataaatattgatatatacaagggtgaaaaaatctatgccttgtgatc 19393211  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||| |||| ||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19393210 aatatagatattaggacaaaggagtaattatacacatgaatattatcatggaaaaggtttcatcagatcacttgacattcttctcact 19393123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 2204978 - 2205156
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||| |||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  2204978 gatattggacttattcgttaaatagtacatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 2205077  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  2205078 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 2205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 18400530 - 18400708
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  18400530 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 18400629  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  | | |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  18400630 atattgagacaaaggggtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 18400708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 18407514 - 18407692
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  18407514 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 18407613  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  | | |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  18407614 atattgagacaaaggggtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 18407692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 16011860 - 16012047
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  16011860 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaatattgatctatacaagggtgacaatatctatgccttgtgatc 16011959  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| | ||||   |||||   |  || | ||| ||| | |||||||||||||||||||||  || |||||||||||| ||| |||||    
T  16011960 aatatatatatgaggacaaagaaataactatacacatgaatattatcatggaaaaggtttccacatatcacttgacatacttgtcact 16012047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 15730177 - 15730355
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||  ||||||||||||| ||||||| |||    
T  15730177 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacgctatctatgccttgagatcaatgaag 15730276  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  15730277 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 15730355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 24443261 - 24443081
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||  ||||||||||||||| ||||||| || ||| ||||||||||| |||||||||||||||||||| || |||||||||||| ||||    
T  24443261 aatatgagatattgagcttattcgttattcactatatttcgggatccagaaatataaatattgatctatacaagggtgaaaaaatctatgccttgtgatc 24443162  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattct 198  Q
    |||| |||||   |||||| |||| |||||||| ||| |  |||||||||||||| ||||||||||||||||| |||||||    
T  24443161 aatatagatacgaagacaaaagagtaattgtacacattaacattatcatggaaaatgtttcgtcagatcacttaacattct 24443081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 30254564 - 30254741
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| || ||||||| | ||| ||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  30254564 gatattggacttattcgttaaatagtatattttgggatcaagataaatagacattgatctatacaagggtgacaccatctatgccttgggatcaatgaag 30254663  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcac 204  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| ||||    
T  30254664 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcac 30254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 18257449 - 18257263
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||| ||||||| |||||| |||||||| || ||||||||||||||| |||||||||||||||| |||||| |||||| |||||  |||    
T  18257449 aatatgagatattgggcttattcattattcggtatatttcgggatcaagaaatataaatattgatctatacaaggatgacaaaatctataccttgtaatc 18257350  T
Q  118 aataaagatatcga-gacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||| ||| |||||  ||| |||||||| ||| | |||||| |||| |||||||| ||||||||||||||||||||| |||||    
T  18257349 aatatagata-cgaggacaaaggagtaattgtacacatgaatattattatgg-aaaggttttgtcagatcacttgacattcttgtcact 18257263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 15169176 - 15168991
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| | |||||| |||||||||||||||| |  ||||||||||||||| |||||||||  ||||| |||||| |||||||||||| | ||    
T  15169176 aatatgagatattaggcttatttgttattcagtatatttcgagatcaagaaatataaatattgatcta--caaggatgacaaaatctatgccttgtgttc 15169079  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    | || | ||||   |||||  ||| |||||||| ||| | ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15169078 agtataaatatgaggacaaaggagtaattgtacacattaatattatcatggaaaaagtttcgtcagatcacttgacattcttgtcact 15168991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 14592269 - 14592360
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatac--aagggtgacaatatctatg 107  Q
    |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||  |||||||| ||||||||||    
T  14592269 aatatgagatattggacttattcgttattcagtatatttcgggatcaagaaatataaatattgatatatacaaaagggtgataatatctatg 14592360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 31190241 - 31190102
Alignment:
Q  67 aaatataaacattgatctatacaaggg-tgacaatatctatgccttgggatcaataaagatatcgagacaacagagcaattgtacgcataattattatca 165  Q
    |||||||||||||||| |||||||||| |||||| || |||| |||  |||||||| ||||||   |||||  ||| |||||||| ||| | ||||||||    
T  31190241 aaatataaacattgatttatacaaggggtgacaaaatatatgacttttgatcaatatagatatgaggacaaaggagtaattgtacacatgaatattatca 31190142  T
Q  166 tggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||| ||||||| ||||||||||||||||| |||||    
T  31190141 tggaaaagatttcgtcggatcacttgacattcttgtcact 31190102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 31190316 - 31190248
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaaggg 93  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  31190316 gatattggacttgttcgttattcagtatattttgggatcaagaaatataaatattgatctatacaaggg 31190248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 205
Target Start/End: Complemental strand, 25845399 - 25845220
Alignment:
Q  26 atattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaaga 125  Q
    |||||| ||||||||| || | ||||||||| |||||||||||||||||| ||||| |||||||||| |||||  | ||||| |||| | || ||| | |    
T  25845399 atattgaacttattcgctactgagtatatttcggaatcaagaaatataaatattgagctatacaaggatgacacaagctatgtcttgtgttcgatataaa 25845300  T
Q  126 tatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||   |||||  ||| || | ||||||| |  |||||||||||||| ||||||||| |||||||||| ||||| |||||    
T  25845299 tatgaggacaaaggagtaactatacgcatgaacattatcatggaaaaagtttcgtcatatcacttgactttcttgtcact 25845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 205
Target Start/End: Original strand, 19388986 - 19389166
Alignment:
Q  26 atattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaaga 125  Q
    ||||| |||||||||||||||| |||||||| || ||||| ||||| ||| ||||| | ||||||||||||||  ||||||| |||  | |||||| |||    
T  19388986 atatttgacttattcgttattcggtatattttgggatcaataaatacaaatattgagccatacaagggtgacacaatctatgtcttatgttcaatataga 19389085  T
Q  126 tatcgagacaacagagcaattgtacgcataattattatcatgg-aaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||   || ||  ||| |||| ||  ||| |  |||||| ||| |||||||||||||| |||||||||||||||| |||||    
T  19389086 tattaggagaaatgagtaattttaaacatgaacattatcttggaaaaaggtttcgtcatatcacttgacattcttgtcact 19389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 12409948 - 12410015
Alignment:
Q  20 tatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctata 87  Q
    |||| ||||||| | |||||||||| ||||||||||| || ||||||||||||||| ||||| |||||    
T  12409948 tatgagatattgaatttattcgttaatcagtatattttgggatcaagaaatataaatattgagctata 12410015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 5982595 - 5982483
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtg--acaata-tctatgccttggg 114  Q
    |||||| ||||||| |||||||| ||| |||||||||||  |||| |||||||||  | ||||| || ||||||||||  |||||| | ||||||||| |    
T  5982595 aatatgagatattgaacttattcattactcagtatatttcagaattaagaaatat-gatattgaactttacaagggtggcacaatattatatgccttgtg 5982497  T
Q  115 atcaataaagatat 128  Q
     |||||||||||||    
T  5982496 ctcaataaagatat 5982483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 9811616 - 9811429
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  9811616 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgcattggggtc 9811517  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9811516 aataaagatatcgagacaaaggagtaattgtacacataattattatcatggaaaaggtttcgtcagatcacttgacattcttgtcact 9811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 7865313 - 7865126
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  7865313 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaaaggtgacaatatctatgcattgggatc 7865214  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  7865213 aataaagatatcgagacaaaggagtaattgtacacataattattatcatggaaaatgtttcgtcagatcacttgacattcttgtcact 7865126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 12703757 - 12703571
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  12703757 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgcattggggtc 12703658  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcac 204  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  12703657 aataaagatatcgagacaaaggagtaattgtacacataattattatcatgaaaaaggtttcgtcagatcacttgacattcttgtcac 12703571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 12764873 - 12764686
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  12764873 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacgatatctatgcattgggatc 12764774  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||| |||||||  ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12764773 aataaagatattgagacaaaggagtaattgtacacataatcattatcatggaaaaggtttcgtcagatcacttgacattcttgtcact 12764686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 20941446 - 20941632
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  20941446 aatatgagatattggacttatttgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgggatc 20941545  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  20941546 aataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 20941632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 26245520 - 26245707
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| ||||||||||||||||| |||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  26245520 aatatgagatatttgacttattcgttattcaatatatttcagaatcaggaaatataaatattgatctatacaagggtgacaatatctatgccttgagatc 26245619  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  26245620 aatatagatattaggacaaaggagtaattgtacacataaatattatcatggaaaaagtttcgtcagatcacttgacattcttgtcact 26245707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 22941669 - 22941856
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaa-gaaatataaacattgatctatacaagggtgacaatatctatgccttgggat 116  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  22941669 aatatgagatattggacttattcgttattcagtatatttcggaatcaaagaaatataattattgatctatacaagggtgacaatacctatgccttgggat 22941768  T
Q  117 caat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  ||||||||||||||||||||| |||||||| |||||    
T  22941769 caataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgtcagatcactttacattcttgtcact 22941856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 25805268 - 25805082
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| |||||||||| ||||| |||| ||||    
T  25805268 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataataattgatctatacaaaggtgacaatacctatgtcttgagatc 25805169  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||| ||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  25805168 aataaaaggtatcgagacaaaggagtaattatacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 25805082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 31097235 - 31097421
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  31097235 aatatgagatattggacttattcgttattca-tatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatc 31097333  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||||||| ||||| ||| |||||||||||||||| |||||    
T  31097334 aataaaaggtatcgagacaaatgagtaattgtacacatgagtattatcatggaaaa-gtttcatcatatcacttgacattcttgtcact 31097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 32325 - 32503
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  32325 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 32424  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  32425 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 32503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 12789539 - 12789361
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  12789539 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 12789440  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  12789439 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 12789361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 23546348 - 23546526
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  23546348 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 23546447  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  23546448 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 23546526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 39535610 - 39535796
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| ||||||||||||||||| ||||||| || ||||||||||||||| |||| || ||||||||| |||||||||||||||||| ||||    
T  39535610 aatatgagatattagacttattcgttattcattatatttcgggatcaagaaatataaatattgttcaatacaagggggacaatatctatgccttgtgatc 39535709  T
Q  118 aataaagatatcga-gacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcac 204  Q
    |||| | ||| ||| ||||| |||| ||||||||  || | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  39535710 aatataaata-cgaggacaaaagagtaattgtacaaatgaatattatcatggaaaaggtttcgtcagatcacttgacattcttgtcac 39535796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 24933182 - 24933004
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||||||||  ||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  24933182 gatattggacttattcgttaaatagtatatttcagaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 24933083  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  24933082 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 24933004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 5098076 - 5098254
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||  ||||||| ||    
T  5098076 gatattggacttattcgttattcagtatattt-ggaatcaagaaaaataaatattgatctgtacaagggtgacaaaatctatgccatgatatcaatatag 5098174  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||   | |||  ||| |||||||| ||||| | |||||||| |||||||| |||||||||||||||||||||| |||||    
T  5098175 atattagggcaaaggagaaattgtacacataaat-ttatcatgaaaaaggttccgtcagatcacttgacattcttgtcact 5098254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 31651664 - 31651476
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||| | | ||||||| || ||||||||||||||| ||||| ||||||||||||||||  |  |||| |||| | ||    
T  31651664 aatatgagatattggacttattcgttactaaatatatttcgggatcaagaaatataaatattgagctatacaagggtgacacaacatatgtcttgtgttc 31651565  T
Q  118 aataaagatatcgaga-caacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||  ||| |||  ||  |||| |||  ||||  ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31651564 aatatagatataaagagcaaatgactaattatacatataaacattatcatggaaaaggtttcgtcggatcacttgacattcttgtcact 31651476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 20100127 - 20099941
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||| ||||||||| || || |||||||||||| |||||||||||||||||||| |  || ||||||||| ||||    
T  20100127 aatatgagatattggacttattcgttatttagtatatttcgggattaagaaatataaatattgatctatacaagggtgatataatatatgccttgtgatc 20100028  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| | ||||   |||||  |||  ||||| | ||| |  |||||||||| |||| |||||||||||||  |||||||||| |||||    
T  20100027 aatataaatatgaggacaaaggagtgattgtgcacatgaacattatcatgg-aaagatttcgtcagatcatatgacattcttgtcact 20099941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 4546481 - 4546668
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4546481 aatatgggatattggacttattcgttattcagtatattttgtaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 4546580  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||| ||||||  ||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  4546581 aataaagatatcaagacaaaggagtaattgtacacataattattatcatggaaaaggtttcgttagatcacttgacattcttgtcact 4546668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 9487965 - 9488153
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9487965 aatatgggatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatcgatacaagggtgacaatatctatgccttgggatc 9488064  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatg-gaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||    
T  9488065 aataaagatatcgagacaaaggagtaattgtacgcataattattatcatgcaaaaagttttcgtcagatcacttgacattcttgtcact 9488153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 34975970 - 34976157
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34975970 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 34976069  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| || ||||||||  ||| |||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  34976070 aataaaaggtaccgagacaaaggagtaattgtacacatgagtattatcatgg-aaaggtttcgtcagatcacttgacattcttgtcact 34976157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 30040373 - 30040186
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||| |||| ||||||||||||||||    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  30040373 aatatgagatattggacatattagttattcagtatatttcaagatcaagaaatataaatattgatctatacaagggtgacaatatctatgccttgtgatc 30040274  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  30040273 aatatagatattaggacaaaggagtaattgtacacataaatattatcatggaaaaagtttcgtcagatcacttgacattcttgtcact 30040186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 3368899 - 3368721
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  3368899 gatattggacttattcgttaaatagtatattttggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 3368800  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  3368799 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 3368721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 2677439 - 2677617
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  2677439 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 2677538  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  2677539 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 2677617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 15815447 - 15815625
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  15815447 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 15815546  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  15815547 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 15815625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 18110919 - 18110741
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  18110919 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 18110820  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  18110819 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 18110741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 26532039 - 26532217
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  26532039 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 26532138  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  26532139 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 26532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 1942143 - 1942254
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1942143 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatatatgccttgggatc 1942242  T
Q  118 aataaagatatc 129  Q
    |||||| |||||    
T  1942243 aataaatatatc 1942254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 15461931 - 15462106
Alignment:
Q  29 ttggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaat-aaagata 127  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||| |||| ||    
T  15461931 ttggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatcaataaaaggta 15462030  T
Q  128 tcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||  ||| |||||||| ||| | | ||||||||  ||||||||| ||||||||||||||||| || |||||    
T  15462031 tcgagacaaaggagtaattgtacacatgaatgttatcatg--aaaggtttcatcagatcacttgacatttttgtcact 15462106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 5870843 - 5871021
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  5870843 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 5870942  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| | ||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  5870943 atattgagacaaaggagtaattatacacttatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 5871021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 20244363 - 20244541
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  20244363 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 20244462  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  20244463 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 20244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 4675859 - 4675681
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||    
T  4675859 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgctttgagatcaatgaag 4675760  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  4675759 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 4675681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 18163588 - 18163766
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| || |||||||||| ||||||| |||    
T  18163588 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactaactatgccttgagatcaatgaag 18163687  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  18163688 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 18163766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 9538377 - 9538564
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| |||||||| |||||||| ||||||| || ||||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  9538377 aatatgagatattagacttattagttattcaatatatttcgggatcaacaaatataaatattgatctatacaagggtgacaaaatctatgccttgtgatc 9538476  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   || ||  ||| ||| |||| ||| |  ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  9538477 aatatagatatgaggagaaatgagtaatcgtacacatgaacattatcatggaaaaggtttcgtcagatcagttgacgttcttgtcact 9538564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 17299835 - 17299657
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  17299835 gatattggacttattcgttaaatagtatatttcggaatcaagataaattaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 17299736  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| | |||||  ||| |||| | | | ||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  17299735 atattgtgacaaaggagtaattatgcacctatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 17299657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 19362829 - 19363009
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||||| |||||||||| ||||||| |  ||||||||||||||| |||||||||||||| |||||||| ||||||| |||| ||||    
T  19362829 aatatgagatattggacttagtcgttattcaatatatttcgagatcaagaaatataaatattgatctatacaa-ggtgacaaaatctatgtcttgtgatc 19362927  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattctt 199  Q
    |||| ||||||   |||||  ||| |||||||| ||| |  ||||||||||||||| |||||| ||| ||||||||||||||    
T  19362928 aatatagatataaggacaaatgagtaattgtacacatgaacattatcatggaaaagatttcgttagagcacttgacattctt 19363009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 5616814 - 5617001
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||| || ||| ||||||| |||| ||||    
T  5616814 aatatgagatattgggcttattcgttattcaatatattttgggatcaagaaatataaatattgatctatacaaggatgccaaaatctatgtcttgtgatc 5616913  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||| ||   |||||  ||| |||||||| ||| |  |||||||||||||||||   |||||||||||| |||||||| |||||    
T  5616914 aatatagacatgaggacaaaggagtaattgtacacatgaacattatcatggaaaaggtagtgtcagatcactttacattcttgtcact 5617001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 19373765 - 19373951
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||| | |||||||||| ||||||| |  || |||||||||||| |||||||||||||| |||||||| |||||||||||| ||||    
T  19373765 aatatgagatattggactaagtcgttattcaatatatttcgagattaagaaatataaatattgatctatacaa-ggtgacaaaatctatgccttgtgatc 19373863  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   ||||   ||| |||||||| ||| |  |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  19373864 aatatagatatgaggacataggaggaattgtacacatgaacattatcatggaaaaggtttcgttagagcacttgacattcttgtcact 19373951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 11421420 - 11421530
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||     
T  11421420 aatatgagatattggacttattcgttattcagtatatttcgggatcaagaaatataaatattgatctatacaagggtggtaatatctatgccttgtgatt 11421519  T
Q  118 aataaagatat 128  Q
    |||| ||||||    
T  11421520 aatatagatat 11421530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 32636902 - 32637089
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||| || |||||||||||||||||||| || ||||||||||| ||| ||||||||||||| ||||||||| ||||||| |||| ||||    
T  32636902 aatatgagatattgggctcattcgttattcagtatatttcgggatcaagaaataaaaatattgatctatacaggggtgacaaaatctatgtcttgtgatc 32637001  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||| |||||||| ||| |  | |||||| ||||| ||||||||| |||| || |||||||| |||||    
T  32637002 aatatagatatgaggacaaatgagtaattgtacacatgaacaatatcatagaaaaagtttcgtcaaatcatttaacattcttgtcact 32637089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 23055947 - 23055889
Alignment:
Q  17 aaatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaa 75  Q
    |||||||||||||| ||||||||||||| |||| |||||| || |||||||||||||||    
T  23055947 aaatatgggatatttgacttattcgttactcaggatatttcgggatcaagaaatataaa 23055889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 5524729 - 5524695
Alignment:
Q  163 tcatggaaaaggtttcgtcagatcacttgacattc 197  Q
    |||||||||||||||||||||||||||||| ||||    
T  5524729 tcatggaaaaggtttcgtcagatcacttgaaattc 5524695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 1942251 - 1942295
Alignment:
Q  161 tatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||| |||||||||  |||||||||||||||||||| |||||    
T  1942251 tatcatgaaaaaggttttttcagatcacttgacattcttttcact 1942295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 8613338 - 8613525
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8613338 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaatggtgacaatatctatgcattgggatc 8613437  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8613438 aataaagatatcgagacaaaggagtaattgtacacataattattatcatggaaaatgtttcgtcagatcacttgacattcttgtcact 8613525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 33317284 - 33317471
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33317284 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgcattgggatc 33317383  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  33317384 aataaagatatcgagacaaaggagtaattgtacacaaaattattatcatggaaaatgtttcgtcagatcacttgacatttttgtcact 33317471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 18019712 - 18019526
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  18019712 aatatgagatattggacttattcgttattcaatatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatc 18019613  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  18019612 aataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 18019526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 14074906 - 14075085
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||||||||||  |||||||||||||||  ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||||| |    
T  14074906 gatattggacttattatttattcagtatatttcagaatcaagaaatataaatattgatctaaacaaggctgaaaatatctatgccttgggatcaataatg 14075005  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||||  ||| |||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  14075006 atatcgagacaaaggagtaattgtacacatgagtattatcatgg-aaaggtttcgtcagatcacttgacattcttgtcact 14075085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 20736213 - 20736026
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||| | ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| |||||||||||| |||     
T  20736213 aatatgagataatagacttattcgttattcagtatatttcgggatcaagaaatataaatattgatctatacaaggatgacaaaatctatgccttgtgata 20736114  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||  |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  20736113 aatatagatattatgacaaaggaataattgtacacatgaatattatcatggaaaaggtttcgtcagatcacttgacattcttgtcact 20736026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 27508223 - 27508045
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  27508223 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 27508124  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||| ||||||||||||||||| |||||    
T  27508123 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcggatcacttgacattcttgtcact 27508045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 1585984 - 1585806
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||  ||||||||||||| ||||||| |||    
T  1585984 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacgctatctatgccttgagatcaatgaag 1585885  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  1585884 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 1585806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 22859764 - 22859586
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||| |||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  22859764 gatattggacttattcgttaaatagtacatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 22859665  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  22859664 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 22859586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 27525437 - 27525259
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || |||||||||||||| || ||||||| ||||||||||||||||||||| |||    
T  27525437 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatataaaggtgacactatctatgccttgggatcaatgaag 27525338  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  27525337 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 27525259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 16789497 - 16789675
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| ||||||| || | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  16789497 gatattggacttattcgttaaatagtatatttcggaatcatgataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 16789596  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| | |||||  ||| |||| ||| | ||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  16789597 atattgtgacaaaggagtaattatacacctatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 16789675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 10358917 - 10358751
Alignment:
Q  35 ttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaagatatcgagac 134  Q
    |||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||| | |||||| ||||||   |||    
T  10358917 ttattcattattcagtatatttggga-tcaagaaatataaatattgatctatacaagggtgacaaaatctatgcattgtgttcaatatagatatgatgac 10358819  T
Q  135 aacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    || ||   |||||||| ||| |  ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  10358818 aaaag---aattgtacacatgaacattatcatggaaaaggtttcgtcagatcacttggcattcttgtcact 10358751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 19735402 - 19735216
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| |||||||| |||||||||||||||| || |||||||||||| || ||||||||||||||||||||||| || ||||||||| ||||    
T  19735402 aatatgagatattagacttattagttattcagtatatttcgggatcaagaaatattaagattgatctatacaagggtgacaaaatatatgccttgtgatc 19735303  T
Q  118 aataaagatatcgag-acaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| | ||| |||| ||||  ||| |||||||| ||| | |||||||||  |||| |||| |||| |||||||||||||||| |||||    
T  19735302 aatatatata-cgagtacaaaggagtaattgtacacatgagtattatcat-aaaaatgttttgtcaaatcacttgacattcttgtcact 19735216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 22560078 - 22559892
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||| ||| ||| |||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||    
T  22560078 aatatgagatattgggcttgttctttattcagtatatttcaggatcaagaaatataaatattgatctatacaagggtgacaaaatctttgccttgtgatc 22559979  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    || | | | ||   |||||   || |||||||| ||| | ||||||||| ||||||||||||||||||||  |||||||||| |||||    
T  22559978 aacataaacatgaggacaaagaagtaattgtacacatgaatattatcat-gaaaaggtttcgtcagatcatgtgacattcttgtcact 22559892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 21995426 - 21995564
Alignment:
Q  67 aaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaagatatcgagacaacagagcaattgtacgcataattattatcat 166  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||| ||||||   ||||| |||| ||||| || ||| | | |||| ||    
T  21995426 aaatataaatattgacctatacaagggtgacaaaatctatgccttgtgatcaatatagatatgaggacaaaagagtaattgaacacatgaatgttatgat 21995525  T
Q  167 ggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||| |||||||||||| |||||||| |||||    
T  21995526 ggaaaaggttttgtcagatcacttaacattcttgtcact 21995564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 19218849 - 19218931
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatg 107  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| |||||||    
T  19218849 gatattgggcttattcgttattcagtatattttgggatcaagaaatataaatattgatctatacaaggttgacaaaatctatg 19218931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 192
Target Start/End: Original strand, 4074001 - 4074168
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||| ||||||||||||| ||||||||||| | ||| || ||||||||| |||||  |||||||||||  ||  ||||||| |||| | || ||| ||    
T  4074001 gatattagacttattcgttactcagtatatttcgaaataaaaaaatataaatattgagttatacaagggtagcacaatctatgtcttgtgttcgatatag 4074100  T
Q  125 atatcga-gacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttga 192  Q
    ||| ||| |||||||||| |||||||||||| |  ||||||||||||||  |||||||| |||||||||    
T  4074101 ata-cgaggacaacagagtaattgtacgcatgaacattatcatggaaaatatttcgtcacatcacttga 4074168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 17120389 - 17120315
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagg 92  Q
    |||||| ||| ||| |||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||    
T  17120389 aatatgagattttgaacttattcgttattcagtatatttcgggatcaagaaatataaatattgatctttacaagg 17120315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 21995006 - 21995063
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaa 75  Q
    |||||| |||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  21995006 aatatgagatattagacttattcgttattcagtatattttgggatcaagaaatataaa 21995063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 17119088 - 17119047
Alignment:
Q  87 acaagggtgacaatatctatgccttgggatcaataaagatat 128  Q
    ||||||| |||||||||||||||||| |||||||| ||||||    
T  17119088 acaagggcgacaatatctatgccttgagatcaatatagatat 17119047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 2962815 - 2962628
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  2962815 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgcatttggatc 2962716  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||| ||  ||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2962715 aataaagatatcgagaaaaaggagtaattgtacacataattattatcatggaaaaggtttcgttagatcacttgacattcttgtcact 2962628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 6431305 - 6431492
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  6431305 aatatgagatattggacttattcgttatttagtatatttcggaatcaagaaatataaacattgatccatacaagggtgacaatatctatgtcttgggatc 6431404  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  6431405 aataaagatatcgagacaaaggagtaattttacacataattattatcatgaaaaaggtttcgtcagatcacttgacattcttgtcact 6431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 22659370 - 22659191
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22659370 gatattggacttattcgttaatcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 22659271  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||||||| ||| | ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  22659270 atattgagacaaaggagtaattgtacacatgagtattatcatggaaaa-gtttcgtcagatcacttgacattcttgtcact 22659191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 25611614 - 25611800
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||  ||||||||| ||||    
T  25611614 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacatatgccttgagatc 25611713  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||||||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  25611714 aataaaaggtatcgagacaaaggagtaattgtacgcatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 25611800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 8371136 - 8370950
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  8371136 aatatgagatattggacttattcgttattcaatatatttcggaatcaagaaatataattattgatctatacaaggatgacaatatctatgccttgggatc 8371037  T
Q  118 aata-aagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||| |||||||| ||  ||| |||||||| ||| | ||||| ||||  | |||||||||||||||||||||||||||| |||||    
T  8371036 aatataaggtatcgagataaaggagtaattgtacacatgaatattaccatg--agaggtttcgtcagatcacttgacattcttgtcact 8370950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 21969752 - 21969938
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||    
T  21969752 aatatgagatattggacttattcgttatccagtatatttccgaatcaagaaatataattattgatctatacaagggtgacaatacctatgtcttgggatc 21969851  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| | | | ||||||||||  ||||||||||||||||||||||| |||||| |||||    
T  21969852 aataaaaggtatcgagacaaaggagtaattgtacacgtgaatattatcatg--aaaggtttcgtcagatcacttgatattcttgtcact 21969938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 27007393 - 27007215
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  27007393 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 27007294  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  27007293 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 27007215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 27014536 - 27014358
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  27014536 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 27014437  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  27014436 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 27014358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 26240903 - 26241090
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||||||||| | |||||||||||| || ||||| ||||||||  ||||||||| ||||||||||||||| |||||||||||||||    
T  26240903 aatatgagatattggacttattcgctgttcagtatatttcgggatcaaaaaatataattattgatctacacaagggtgacaatacctatgccttgggatc 26241002  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| ||| |||||||  ||| |||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  26241003 aataaaaggtatggagacaaaggagtaattgtacacatgagtattatcatgg-aaaggtttcgtcagatcacttgacattcttgtcact 26241090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 21917102 - 21917280
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  21917102 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 21917201  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  21917202 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 21917280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 27880363 - 27880185
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||| |||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  27880363 gatattggacttattcgttaaatagtacatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 27880264  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  27880263 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 27880185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 28020544 - 28020366
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||| |||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  28020544 gatattggacttattcgttaaatagtacatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 28020445  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  28020444 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 28020366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 45534149 - 45533971
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  45534149 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 45534050  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  45534049 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 45533971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 18835764 - 18835951
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||| ||||||| | |  ||||    
T  18835764 aatatgagatattggacttatttgttattcagtatatttcgggatcaagaaatataaatattgatctatacaatggtgacaaaatctatgtcatttgatc 18835863  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||  |||||   ||| |||||||| ||| | |||||||||| |||||||||||||| |||||||||||||||| |||||    
T  18835864 aatatagatatgaagacagaggagtaattgtacacatgaatattatcatgaaaaaggtttcgtcaaatcacttgacattcttgtcact 18835951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 12562542 - 12562692
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  12562542 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgggatc 12562641  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatg 167  Q
    ||| |||| ||| |||||||  ||| |||||||| ||| | ||||||||||    
T  12562642 aataaaaggtattgagacaaaggagtaattgtacacatgaatattatcatg 12562692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 22130485 - 22130307
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  22130485 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 22130386  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  | | |||| ||| ||||  ||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  22130385 atattgagacaaaggggtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacactcttgtcact 22130307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 8781758 - 8781571
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||| |||||| |||||||||||||||| ||||||| |||| | ||    
T  8781758 aatatgagatattgggcttattcgttattcaatatattttgggatcaagaaatataaatattgatatatacaagggtgacaaaatctatgtcttgtgttc 8781659  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   ||||| | || |||||| | ||| |  ||||||| |||||| ||||||| |||||||||||||||||| |||||    
T  8781658 aatatagatatgaggacaaaaaagtaattgtgcacatcaacattatcaaggaaaatgtttcgttagatcacttgacattcttgtcact 8781571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 20535093 - 20534906
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||| | || |||||| |||||||||||| ||||    
T  20535093 aatatgagatattgggcttattcgttattcagtatatttcgggatcaagaaatataaatattgatctatatagggatgacaaaatctatgccttgtgatc 20534994  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||  |||| | | ||| |  |||||||||||||| |||||||||||||| ||||||||||| |||||    
T  20534993 aatatagatatgaggacaaaggaataattatgcacatgaacattatcatggaaaatgtttcgtcagatcatttgacattcttgtcact 20534906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 27098879 - 27098776
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||||||||||||| |||||| ||| ||| |||||||  | |||||||||||| |  ||||| ||||||||||||||||  ||||||| |||| | ||    
T  27098879 aatatgggatattggatttattcattactcaatatattttaggatcaagaaatattactattgagctatacaagggtgacacaatctatgtcttgtgttc 27098780  T
Q  118 aata 121  Q
    ||||    
T  27098779 aata 27098776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 7e-76; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 25978611 - 25978424
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25978611 aatatgggatattgaacttatttgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 25978512  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||| |||||    
T  25978511 aataaagatatcgagacaaaggagtaattgtacgcataattattatcatggaaaatatttcgtcaaatcacttgatattcttgtcact 25978424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 15317060 - 15316872
Alignment:
Q  17 aaatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggat 116  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||    
T  15317060 aaatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatttatgcattgagat 15316961  T
Q  117 caataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||||||||||||  ||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  15316960 caataaagatatcgagacaatggagtaattgtacacataattaatatcatggaaaaggtttcgtcatatcacttgacattcttgtcact 15316872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 11788006 - 11788193
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11788006 aatatgagatattagacttattcgttattcagtatatttcggaatcaataaatataaacattggtctatacaagggtgacaatatctatgccttgggatc 11788105  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||| |||| ||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  11788106 aataaagatattgagaaaaaggagtaattgtacacataattattatcatggaaaaggtttcgtcagatcacttgacattattgtcact 11788193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 28088532 - 28088711
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28088532 gatattggacttattcattattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 28088631  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||||  ||| |  ||||| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  28088632 atatcgagacaaaggagtagctgtacacatgagtattatcatgg-aaaggtttcgtcagatcacttgacattcttgtcact 28088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 21034657 - 21034843
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  21034657 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgggatc 21034756  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  21034757 aataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 21034843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 21399211 - 21399397
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  21399211 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgggatc 21399310  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| ||||||||||| |||| |||||||| ||| | | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  21399311 aataaaaggtatcgagacaaaagagtaattgtacacatgaattttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 21399397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 15846419 - 15846233
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  15846419 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatc 15846320  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||| ||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  15846319 aataaaaggtatcgagacaaaggagtaattatacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 15846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 55427447 - 55427625
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  55427447 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 55427546  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  55427547 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 55427625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 12300336 - 12300514
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  12300336 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 12300435  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| | |||||  ||| |||| ||| | ||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  12300436 atattgtgacaaaggagtaattatacacttatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 12300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 20147430 - 20147252
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||| |||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  20147430 gatattggacttattcgttaaatagtacatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 20147331  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  ||| |||||||||||||||||||||||||| |||||    
T  20147330 atattgagacaaaggagtaattatacacatatgtattatcatg--aaatgtttcgtcagatcacttgacattcttgtcact 20147252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 15537954 - 15538135
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| || ||||| ||||||| ||||||| ||||||| || ||| ||||||||||| |||||| |||| ||||||||||| ||||||| |||| ||||    
T  15537954 aatatgagacattgggcttattcattattcaatatattttgggatctagaaatataaatattgatttatataagggtgacaaaatctatgtcttgtgatc 15538053  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattctt 199  Q
    |||| ||||||   |||||  | | |||||||| ||| |  |||||||||||||||||||||||| ||||||||||||||||    
T  15538054 aatatagatatgaggacaaatgcgtaattgtacacatgaacattatcatggaaaaggtttcgtcatatcacttgacattctt 15538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 14147446 - 14147625
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||| ||| ||||||||||||||||||| || ||||| ||||||||| |||||||||||||||||||| || |||||||||||| |||||||| ||    
T  14147446 gatattgggcttgttcgttattcagtatattttgggatcaaaaaatataaatattgatctatacaagggtgaaaaaatctatgccttgtgatcaatatag 14147545  T
Q  125 atatcgag-acaacagagcaat-tgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||| ||||  ||| ||| ||||| ||| | |||||||   ||||||||||||||| |||||||||||||||| |||||    
T  14147546 atat-gagcacaaaggagtaatatgtacacatgaatattatc--tgaaaaggtttcgtcatatcacttgacattcttgtcact 14147625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 26816717 - 26816897
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||| | ||||| |||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||| || | | ||| |||| |||||||| |     
T  26816717 gatattaggcttatccgtttttcagtatatttcggaatcaaaaaatataaatattgatctatacaagggtgataaaaacaatgtcttgtgatcaatataa 26816816  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||   |||||  ||| ||  |||| ||| |  ||||||||||||||||||| |||| |||||||||||||||| |||||    
T  26816817 atatgaggacaaaggagtaagcgtacacatgaacattatcatggaaaaggttttgtcatatcacttgacattcttgtcact 26816897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14890810 - 14890867
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaa 75  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  14890810 aatatgagatattggacttattcgttattcagtatatttcggaatcaataaatataaa 14890867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 30464422 - 30464491
Alignment:
Q  17 aaatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctata 87  Q
    ||||||| ||||||  | |||||||||||||||||||||| || || || ||||||||| |||||||||||    
T  30464422 aaatatgagatattatatttattcgttattcagtatatttcgggat-aaaaaatataaatattgatctata 30464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 6e-67; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 24229098 - 24228911
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24229098 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 24228999  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| || ||||||||  ||| |||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  24228998 aataaaaggtaccgagacaaaggagtaattgtacacatgagtattatcatgg-aaaggtttcgtcagatcacttgacattcttgtcact 24228911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 24249908 - 24249730
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  24249908 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 24249809  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  24249808 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 24249730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 30174803 - 30174981
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  30174803 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 30174902  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  30174903 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 30174981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 19616853 - 19617040
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||| ||||||||||||||| || || ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  19616853 aatatgagatattggacttattcattattcagtatatttcgggataaagaactataaatattgatctatacaagggtgacaatatctatgccttgtgatc 19616952  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||   |||||  ||| | |||||| ||| | ||||||||| ||||| ||||||||| |||||||||||||||| |||||    
T  19616953 aatatagatatgaggacaaaggagtatttgtacacatgaatattatcatcgaaaaagtttcgtcatatcacttgacattcttgtcact 19617040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 15341884 - 15341698
Alignment:
Q  19 atatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatca 118  Q
    ||||| ||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||||||||||||||||||| |||||||||||| ||  |    
T  15341884 atatgagatattggacttattcgttattcagtatatttagagataaagaaatataaatattgatctatacaagggtgacaaaatctatgccttgtgagaa 15341785  T
Q  119 ataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| ||||||   || ||  ||| |||||| | ||| | ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15341784 atatagatatgaggataaatgagtaattgtgcacatgaatattatcatggaaaatgtttcgtcagatcacttgacattcttgtcact 15341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 29800897 - 29801077
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||| |||||||||||||||||||||||| || |||| |||||||||| ||||||||||||||| ||||||| || |||| |||| |||| ||  ||    
T  29800897 gatattgaacttattcgttattcagtatatttcgggatcaggaaatataaatattgatctatacaagagtgacaaaatatatgtcttgtgatcgatttag 29800996  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||   |||||| ||| |||||||| ||| |  ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  29800997 atatgaggacaacggagtaattgtacacatgaacattatcatggaaaaggtttcgtcagatcaattgacattcttgtcact 29801077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 24763555 - 24763376
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||| ||||||||||| ||| |||||||||||| |  ||||||||||||||| |||||| ||||||||||||||||| |||||  |||| ||||    
T  24763555 aatatgagatcttggacttatttgttgttcagtatatttcgagatcaagaaatataaatattgatatatacaagggtgacaatgtctatatcttgtgatc 24763456  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattc 197  Q
    ||||  |||||   |||||  ||| || | ||| ||| | ||||||||||||||||||||| ||||||||  ||||||||    
T  24763455 aatattgatataaggacaaaggagtaagtatacacatgaatattatcatggaaaaggtttcatcagatcatatgacattc 24763376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 20687297 - 20687117
Alignment:
Q  20 tatgggatattggacttattcgttattcagtatatt-taggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatca 118  Q
    |||| ||||||||||||||| ||||||||||||||| |||| || || ||||||||| |||||| ||||||||| | | || || |||| ||||   |||    
T  20687297 tatgagatattggacttatttgttattcagtatattctagg-ataaaaaaatataaatattgatatatacaaggataataaaatatatgtcttgtattca 20687199  T
Q  119 ataaagatatcgag-acaacagagcaattgtacgcataattattatcatgg-aaaaggtttcgtcagatcacttgacattctt 199  Q
    ||| |||||| ||| ||||  ||| || ||||| | | |  ||| |||||| |||||||||||| ||||||||||||||||||    
T  20687198 atatagatat-gagaacaaaggagtaaatgtacccgtgaacattttcatggaaaaaggtttcgtaagatcacttgacattctt 20687117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 634357 - 634544
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  634357 aatatgagatattggactgattcgttactcagtatattttggaatcaagaaatataaacattgatctatacaagggtgacaatatttatgtcttgggatc 634456  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||||||||||||||||||  ||| |||||||| ||| | ||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  634457 aataaagatatcgagacaaaggagtaattgtacacatgaatattatcatggaaaatgtttcgtcagatcacatgacattcttgtcact 634544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 19706322 - 19706136
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  19706322 aatatgagatattggacttattcgttattcagtatattttggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatc 19706223  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  19706222 aataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 19706136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 47667368 - 47667182
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  47667368 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgggatc 47667269  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| ||||| || | | | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  47667268 aataaaaggtatcgagacaaaggagtaattgcacacgtgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 47667182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 28134606 - 28134420
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  28134606 aatatgagatattgaacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttgagatc 28134507  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||| ||| ||| | ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  28134506 aataaaaggtatcgagacaaaggagtaattatacacatgaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 28134420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 20391115 - 20390937
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  20391115 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 20391016  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  20391015 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 20390937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 22612911 - 22613097
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |   || ||||||||||||||||||||| |||||||||| ||||    
T  22612911 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatatgattttttatctatacaagggtgacaatacctatgccttgagatc 22613010  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| | |||||| ||||| ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  22613011 aataaaaggtatcgagacaaaggagtacttgtacacataaatattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 22613097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 43802248 - 43802062
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||  ||||    
T  43802248 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatacctatgccttaagatc 43802149  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  ||||||||||| ||||||||| |||||||| |||||    
T  43802148 aataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgttagatcacttaacattcttgtcact 43802062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 9456542 - 9456720
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  9456542 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 9456641  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  9456642 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 9456720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 20779521 - 20779343
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  20779521 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 20779422  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  20779421 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 20779343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 42816865 - 42816687
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  42816865 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 42816766  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  42816765 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 42816687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 8728081 - 8728268
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| ||||||||||||||||||||||||||||||||  | || |||||||||||| ||||||||||||||||||||||| ||||||| |||| ||||    
T  8728081 aatatgagatattggacttattcgttattcagtatatttccggataaagaaatataaatattgatctatacaagggtgacaaaatctatgtcttgtgatc 8728180  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| ||||||    ||||  ||| |||||||   || | ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8728181 aatatagatattagaacaaaggagtaattgtatagatgaatattatcatggaaaatgtttcgtcagatcacttgacattcttttcact 8728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 22670133 - 22669955
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   |||| |||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  22670133 gatattggacttattcgttaaatagtacatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgagatcaatgaag 22670034  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  22670033 atattgagacaaaggagtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 22669955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 14482339 - 14482494
Alignment:
Q  48 agtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaagatatcgagacaacagagcaattg 147  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||  ||| ||||     
T  14482339 agtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgagatcaatgaagatattgagacaaaggagtaatta 14482438  T
Q  148 tacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  14482439 tacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 14482494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 51997687 - 51997767
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgaca 98  Q
    |||||| |||||| ||||||||| ||| | |||||||||  ||||||||||||||||| ||||| ||||||||| ||||||    
T  51997687 aatatgagatatttgacttattcattacttagtatatttcagaatcaagaaatataaatattgaactatacaagagtgaca 51997767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 9460771 - 9460816
Alignment:
Q  158 tattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  9460771 tattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 9460816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 29097148 - 29097198
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaa 75  Q
    |||||||  ||||||||||||||||||||||| || ||||| |||||||||    
T  29097148 gatattgagcttattcgttattcagtatatttcgggatcaataaatataaa 29097198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 602 - 788
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||  ||||||||| |||||    
T  602 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataattattgatctatacaagggtgacaatgcctatgcctttggatc 701  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||| |||| |||||||||||  ||| |||||||| ||| | ||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  702 aataaaaggtatcgagacaaaggagtaattgtacacatgaatattatcatg--aaaggtttcgtaagatcacttgacattcttgtcact 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 405 - 576
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  405 aatatgagatattggacttattcgttattcagtatatttcggaatcaagaaatataaatattgatctatacaagggtgacaatacctatgccttgggatc 504  T
Q  118 aat-aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcact 189  Q
    ||| |||| |||||||||||  ||| ||||| ||  || | ||||||||||| ||||||||||||||||||||    
T  505 aataaaaggtatcgagacaaaggagtaattgaacatatgagtattatcatgg-aaaggtttcgtcagatcact 576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 54182 - 54362
Alignment:
Q  19 atatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatca 118  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||| |||  |||||    
T  54182 atatgagatattggacttattcgttattcagtatatttcggaatcaagaaatatcaatattgatctatacaagggtgacaaaatctatgtcttaagatca 54281  T
Q  119 ataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattctt 199  Q
    ||| | ||||   |||||  ||| ||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  54282 atataaatattaggacaaaggagtaatcgtacacataaatattatcatggaaaaggtttcgtcagttcacttgacattctt 54362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 12833 - 12646
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||||||||||||||||||||| ||||||  ||||||||| |||||||| ||| ||||||||||| ||||||| |||||||||||| ||||    
T  12833 aatatgagatattggacttattcgttattcaatatattccggaatcaaggaatataaatattcatctatacaagagtgacaaaatctatgccttgagatc 12734  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||  |||||   |||||  ||| |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  12733 aatatcgatattaggacaaaggagtaattgtacacataaatattatcatagaaaaggtttcgtcagatcacttgacattcttgtcact 12646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 3551 - 3373
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  3551 gatattggacttattcgttaaatagtatatttcggaatcaagataaataaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 3452  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  ||| |||| ||| ||||  | ||||||||  |||||||||||||||||||||||||||||| |||||    
T  3451 atattgagacaaaggagtaattatacacatatgtgttatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 3373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 120156 - 120334
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    ||||||||||||||||||||   ||||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  120156 gatattggacttattcgttaaatagtatatttcggaatcaagataaatgaacattgatctatacaagggtgacactatctatgccttgggatcaatgaag 120255  T
Q  125 atatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||  | | |||| ||| ||||  ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  120256 atattgagacaaaggggtaattatacacatatgtattatcatg--aaaggtttcgtcagatcacttgacattcttgtcact 120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 67250 - 67146
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatcaataaag 124  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  67250 gatattggacttattcgttattcagtatatttcggaatcaagaaatataaacattgatctatacaagggtgacaatatatatgccttgggatcaataaat 67151  T
Q  125 atatc 129  Q
    |||||    
T  67150 atatc 67146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 67149 - 67105
Alignment:
Q  161 tatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||||| |||||||||  |||||||||||||||||||| |||||    
T  67149 tatcatgaaaaaggttttttcagatcacttgacattcttttcact 67105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 11409 - 11311
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggat 116  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  11409 aatatgagatattggacttattcgttattcagtatatttcggaatcaaaaaatataaacattgatctgtacaagggtgacaatatctatgcattgggat 11311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 26960 - 27115
Alignment:
Q  18 aatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggatc 117  Q
    |||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||| || |||||||||||| ||||    
T  26960 aatatgagatatttgacttattcgttattcagtatatttcgggatcaagaaatataaatattgatttatacaagggtgaaaaaatctatgccttgtgatc 27059  T
Q  118 aataaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaag 173  Q
    |||| ||||||  ||||||  ||| |||| ||| ||| | ||||||| | ||||||    
T  27060 aatatagatatgaagacaaaggagtaattatacacatgagtattatcctagaaaag 27115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 39873 - 39684
Alignment:
Q  17 aaatatgggatattggacttattcgttattcagtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgccttgggat 116  Q
    ||||||| |||||  | ||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| ||||||| |||| |||    
T  39873 aaatatgagatatccggcttgttcgttattcagtatatttcgggatcaagaaatataaatattgatctatacaaggatgacaaaatctatgacttgtgat 39774  T
Q  117 caataaagatatcgagacaacagagcaattgtacgcata--attattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    ||||| ||||||   |||||  ||| ||  |||| ||||  | ||||||||| ||||| ||||| |||||||||||||||||||| |||||    
T  39773 caatatagatatgaggacaaaggagtaacagtacacatatgaatattatcat-gaaaaagtttcatcagatcacttgacattcttgtcact 39684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 9558 - 9747
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaat-caagaa-atataaacattgatctatacaagggtgacaa-ta--tctatgccttgg-gatca 118  Q
    ||||||||||||||||||||   |||||||||  |||| |||||| | ||||||||||||||||||||||||||| | ||  |||||||||| | |||||    
T  9558 gatattggacttattcgttaaatagtatatttcagaatacaagaataaataaacattgatctatacaagggtgaccactacctctatgccttagagatca 9657  T
Q  119 ataaagatatcgagacaacag-agcaattgtacgcataat-tattatcatggaaaaggtttcgtcagatc-acttgacattcttctcact 205  Q
    || ||||||| ||||||| || || |||| ||| ||| || | ||||||| |||| | |||||||||||| ||||||||||||| |||||    
T  9658 atgaagatattgagacaaaaggagtaattatacacattatgtgttatcatagaaaggttttcgtcagatcaacttgacattcttgtcact 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 15342 - 15402
Alignment:
Q  48 agtatatttaggaatcaagaaatataaacattgatctatacaagggtgacaatatctatgc 108  Q
    |||||||||||| || |||||||||||| ||||| ||||||||||||||||  ||||||||    
T  15342 agtatatttagggattaagaaatataaatattgagctatacaagggtgacataatctatgc 15402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 108864 - 108826
Alignment:
Q  161 tatcatggaaaaggtttcgtcagatcacttgacattctt 199  Q
    |||||||||||||||||| || |||||||||||||||||    
T  108864 tatcatggaaaaggtttcctcggatcacttgacattctt 108826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 685 - 767
Alignment:
Q  121 aaagatatcgagacaacagagcaattgtacgcataattattatcatggaaaaggtttcgtcagatcacttgacattcttctcact 205  Q
    |||| |||||||||||  ||| |||||||| | |   ||||||||||  ||||| |||||||||||||||||||||||| |||||    
T  685 aaaggtatcgagacaaaggagtaattgtacacgtgcatattatcatg--aaaggattcgtcagatcacttgacattcttgtcact 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 81683 - 81611
Alignment:
Q  25 gatattggacttattcgttattcagtatatttaggaatcaagaaatataaaca-ttgatctatacaagggtga 96  Q
    |||||| ||||||| ||||| | |||||||||  | ||||||||||||||| | |||| ||||||||||||||    
T  81683 gatattagacttatccgttacttagtatatttcaggatcaagaaatataaatatttgagctatacaagggtga 81611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University