View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4928_low_10 (Length: 474)
Name: NF4928_low_10
Description: NF4928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4928_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 47 - 459
Target Start/End: Complemental strand, 32524443 - 32524029
Alignment:
| Q |
47 |
tccaaattcttaagctataaataccctcacaaccgttacaactcccaccccactaccttcttcaccacttctaccactccataatctttcaacttcttaa |
146 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32524443 |
tccaaattcttaagctataaataccctcacaaccgttacaactcccaccccactaccttcttcaccacttctaccactccataatctttcaacttcttaa |
32524344 |
T |
|
| Q |
147 |
tttcctctaacacattatttatacaactctcccaaattcttcattacaacatttcaccaaaatgtct-aaactaaacaatcttctttctttt-gtcttaa |
244 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||| | |||||||||||||||||| ||||| ||||||| |
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| T |
32524343 |
tttcctctaacacattatttatacaactcttccaaattcttcattacaatatttcaccagaatgtgttaaactaaacaatcttcttcctttttgtcttaa |
32524244 |
T |
|
| Q |
245 |
tcataatcacattatcttgttacttaaattcctcaaccgcgaaagcggcgtcgtcgtcgacgacatataatgtaataaactatggagccaaaccagatgg |
344 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
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| T |
32524243 |
tcataatcacattatcttgttacttaaattcctcaaccgcaaaagcggcgtcgtcgtcgtcgacatacaatgtaataaactatggagccaaaccagatgg |
32524144 |
T |
|
| Q |
345 |
taaaactgattccacaaaggcatttggaaatgtatgggctaaggcatgttcctcgccgtatccggcatcaatttacgtgccacaagggaaattcttactt |
444 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32524143 |
taaaactgattccacaaaggcatttggaaatgtatgggctaaggcatgttcctcgccgtatccggcatcaatttacgtgccacaagggaaattcttactt |
32524044 |
T |
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| Q |
445 |
ggaactgcaacattt |
459 |
Q |
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||||||||||||||| |
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| T |
32524043 |
ggaactgcaacattt |
32524029 |
T |
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