View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4930-Insertion-3 (Length: 649)

Name: NF4930-Insertion-3
Description: NF4930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4930-Insertion-3
NF4930-Insertion-3
[»] chr3 (14 HSPs)
chr3 (6-649)||(23224264-23224909)
chr3 (401-513)||(39558418-39558530)
chr3 (455-531)||(49857905-49857981)
chr3 (423-527)||(49971921-49972025)
chr3 (21-82)||(13499458-13499519)
chr3 (21-82)||(27010597-27010658)
chr3 (21-82)||(27334854-27334915)
chr3 (21-82)||(30213882-30213943)
chr3 (21-82)||(33415877-33415938)
chr3 (21-82)||(39866264-39866325)
chr3 (21-82)||(42490319-42490380)
chr3 (38-82)||(42761623-42761667)
chr3 (401-513)||(50814020-50814132)
chr3 (401-513)||(50861732-50861844)
[»] chr8 (5 HSPs)
chr8 (21-82)||(40716646-40716707)
chr8 (21-82)||(616861-616922)
chr8 (21-82)||(623254-623315)
chr8 (21-82)||(18035178-18035239)
chr8 (21-82)||(40494462-40494523)
[»] chr5 (6 HSPs)
chr5 (21-82)||(32400405-32400466)
chr5 (21-82)||(978155-978216)
chr5 (21-82)||(9502750-9502811)
chr5 (21-82)||(11761144-11761205)
chr5 (21-82)||(14634280-14634341)
chr5 (21-82)||(33387298-33387359)
[»] chr4 (9 HSPs)
chr4 (21-82)||(14144580-14144641)
chr4 (21-82)||(29830421-29830482)
chr4 (21-82)||(43967801-43967862)
chr4 (21-82)||(44232200-44232261)
chr4 (21-82)||(45291910-45291971)
chr4 (21-82)||(54330813-54330874)
chr4 (21-82)||(55209697-55209758)
chr4 (38-82)||(35381034-35381078)
chr4 (38-82)||(38416790-38416834)
[»] chr2 (5 HSPs)
chr2 (22-82)||(31610777-31610837)
chr2 (21-82)||(5405074-5405135)
chr2 (21-82)||(7608127-7608188)
chr2 (21-82)||(8042145-8042206)
chr2 (21-82)||(19141189-19141250)
[»] scaffold0225 (1 HSPs)
scaffold0225 (21-82)||(8956-9017)
[»] scaffold0029 (1 HSPs)
scaffold0029 (21-82)||(138153-138214)
[»] chr7 (7 HSPs)
chr7 (21-82)||(28061638-28061699)
chr7 (21-82)||(36623386-36623447)
chr7 (21-82)||(40090041-40090102)
chr7 (21-82)||(42890466-42890527)
chr7 (21-82)||(47156105-47156166)
chr7 (21-82)||(48602514-48602575)
chr7 (38-82)||(46103510-46103554)
[»] chr6 (4 HSPs)
chr6 (21-82)||(6563304-6563365)
chr6 (21-82)||(19088081-19088142)
chr6 (21-82)||(32414802-32414863)
chr6 (38-82)||(24624081-24624125)
[»] chr1 (3 HSPs)
chr1 (21-82)||(6402533-6402594)
chr1 (21-82)||(11641190-11641251)
chr1 (21-82)||(36757609-36757670)


Alignment Details
Target: chr3 (Bit Score: 483; Significance: 0; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 6 - 649
Target Start/End: Original strand, 23224264 - 23224909
Alignment:
Q  6 caaggacaatcgatgatatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagttnnnnnnntacagtcaaagtaaat 105  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||    
T  23224264 caaggacaactgatgatatttatcgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagttaaaaaagtatagtcaaagtaaat 23224363  T
Q  106 tttgtaaaaatgcaacatgtattgcaacattttgctatactcattgaacatattttaacactcatcaactatttttatgttaataactgaaaatgtggca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  23224364 tttgtaaaaatgcaacatgtattgcaacattttgctatactcattgaacatattttaacactcatcacc-atttttatgttaataactgaaaatgtggca 23224462  T
Q  206 tagattgatgctaaggttttgaactacaataaaaacaaatttggagatatcgtttttatagaagtagtgacatttgatgtggaatgagtatgggtagtgt 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23224463 tagattgatgctaaggttttgaactacattaaaaacaaatttggagatatcgtgtttatagaagtagtgacatttgatgtggaatgagtatgggtagtgt 23224562  T
Q  306 tttctcgcttggtcatggcccgttcgacaaaattagaaaaggttaaggcgtctcgaaaatgcttgcaatcgaagctgaggatgggttgtgcgagaaagag 405  Q
    | ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||| |||||||||    
T  23224563 tatctcgcttgatcatggcccgttcgacaaaattagaaaaggttaaagcgtctcgaaaatgcttgtaatcgaagcagaggatgagttgtgagagaaagag 23224662  T
Q  406 tggtttccatccctctgagagaatgcttgtgacagctgcgtctttggttggaagaaagaagagaatgtgatgaagaagtgaatctggaagattgctgatt 505  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  23224663 tggtttccatctctctgagagaatgcttgtgacggctgtgtctttggtgggaagacaggagagaatgtgatgaagaagtgaatctggaaaattgctgatt 23224762  T
Q  506 ctgtctttttcttcttgaattg-aaaggcgcagcggccatgacattgcggtggctgatgggcaaatgaaaaaagccaagttttttctgtgttttcttatc 604  Q
     |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  23224763 ttgtcttcttcttcttgaattgaaaaggcgcagcggccatgacattgcggtggccgatgggaaaatgaaaaaagccaagttttttctgtgttttcttatc 23224862  T
Q  605 tcattcc--aatatacacacagctcgggtgttatcttcgatgacttg 649  Q
     ||||||   |||||||||||||||  ||||||||||||||||||||    
T  23224863 ccattcccatatatacacacagctcaagtgttatcttcgatgacttg 23224909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 513
Target Start/End: Complemental strand, 39558530 - 39558418
Alignment:
Q  401 aagagtggtttccatccctctgagagaatgcttgtgacagctgcgtctttggttggaagaaagaagagaatgtgatgaagaagtgaatctggaagattgc 500  Q
    |||||||| ||||| | || |||||| ||| ||||| | || ||||||||||| ||||||||  |||| || |||||||||||||  || |||||||  |    
T  39558530 aagagtggcttccacctctttgagaggatggttgtggccgcagcgtctttggtaggaagaaaagagaggatttgatgaagaagtgcgtccggaagatcac 39558431  T
Q  501 tgattctgtcttt 513  Q
    |||||||||||||    
T  39558430 tgattctgtcttt 39558418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 455 - 531
Target Start/End: Original strand, 49857905 - 49857981
Alignment:
Q  455 ggaagaaagaagagaatgtgatgaagaagtgaatctggaagattgctgattctgtctttttcttcttgaattgaaag 531  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||    ||||||||||||| ||||||| ||||||||||    
T  49857905 ggaagaaaggagagaatatgatgaacaagtgagtctggaagcgcactgattctgtcttcttcttctggaattgaaag 49857981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 527
Target Start/End: Original strand, 49971921 - 49972025
Alignment:
Q  423 agagaatgcttgtgacagctgcgtctttggttggaagaaagaagagaatgtgatgaagaagtgaatctggaagattgctgattctgtctttttcttcttg 522  Q
    |||| ||| ||||||| || || | |||||| ||||||||  | |||||||||  ||||||||||||||| |||   ||||||||||||| |||||||||    
T  49971921 agaggatgattgtgacggcggcatttttggtaggaagaaaagaaagaatgtgaataagaagtgaatctgggagagcactgattctgtcttcttcttcttg 49972020  T
Q  523 aattg 527  Q
    |||||    
T  49972021 aattg 49972025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 13499458 - 13499519
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  13499458 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 13499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 27010597 - 27010658
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  27010597 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 27010658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 27334854 - 27334915
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  27334854 atatttttcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 27334915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 30213943 - 30213882
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  30213943 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 30213882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 33415938 - 33415877
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  33415938 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 33415877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 39866264 - 39866325
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  39866264 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 39866325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 42490319 - 42490380
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  42490319 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 42490380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 42761623 - 42761667
Alignment:
Q  38 tcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| || |||||||| |||||||||| |||||||||||||||    
T  42761623 tcaaacaacatcttacatgctaatatttgtatttatatattagtt 42761667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 513
Target Start/End: Complemental strand, 50814132 - 50814020
Alignment:
Q  401 aagagtggtttccatccctctgagagaatgcttgtgacagctgcgtctttggttggaagaaagaagagaatgtgatgaagaagtgaatctggaagattgc 500  Q
    |||||||| ||||| | || |||||||||| ||||| | ||||||||||| || ||||| ||  | ||||| | |||||||||||  || || ||||  |    
T  50814132 aagagtggattccacctctttgagagaatggttgtggccgctgcgtctttcgtcggaaggaatgacagaatttcatgaagaagtgtgtccggcagatcac 50814033  T
Q  501 tgattctgtcttt 513  Q
    |||||||||||||    
T  50814032 tgattctgtcttt 50814020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 513
Target Start/End: Original strand, 50861732 - 50861844
Alignment:
Q  401 aagagtggtttccatccctctgagagaatgcttgtgacagctgcgtctttggttggaagaaagaagagaatgtgatgaagaagtgaatctggaagattgc 500  Q
    |||||||| ||||| | || |||||||||| ||||| | ||||||||||| || ||||| ||  | ||||| | |||||||||||  || || ||||  |    
T  50861732 aagagtggattccacctctttgagagaatggttgtggccgctgcgtctttcgtcggaaggaatgacagaatttcatgaagaagtgtgtccggcagatcac 50861831  T
Q  501 tgattctgtcttt 513  Q
    |||||||||||||    
T  50861832 tgattctgtcttt 50861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000009; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 40716646 - 40716707
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||||||||||| || |||||| || |||||||| |||| ||||| |||||||||||||||    
T  40716646 atatttattgagacaaatcaaacaacatcttacatgctaaaatttgtatttatatattagtt 40716707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 616922 - 616861
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  616922 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 616861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 623315 - 623254
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  623315 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 623254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 18035239 - 18035178
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||| || |||| || |||||| || |||||||| |||| |||||||||||||||||||||    
T  18035239 atattaatcgagacaaatcaaacaacatcttacatgctaacatttgcatttatatattagtt 18035178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 40494523 - 40494462
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  40494523 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 40494462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 32400466 - 32400405
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||||||||||| || | |||| || |||||||| |||||||||| |||||||||||||||    
T  32400466 atatttattgagacaaattaaacaacatcttacatgctaatatttgtatttatatattagtt 32400405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 978216 - 978155
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  978216 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 978155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 9502750 - 9502811
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  9502750 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 9502811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 11761205 - 11761144
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||| ||||||| || |||||| || ||||||||  ||||||||| |||||||||||||||    
T  11761205 atattgattgagacaaatcaaacaacatcttacatgttaatatttgtatttatatattagtt 11761144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 14634280 - 14634341
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  14634280 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 14634341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 33387359 - 33387298
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  33387359 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 33387298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000009; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 14144580 - 14144641
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||| ||||||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  14144580 atattcattgagacaaatcaaacaacatcttacatactaatatttgtatttatatattagtt 14144641  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 29830482 - 29830421
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  29830482 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 29830421  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 43967862 - 43967801
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  43967862 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 43967801  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 44232200 - 44232261
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  44232200 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 44232261  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 45291971 - 45291910
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  45291971 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 45291910  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 54330813 - 54330874
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  54330813 atatttgtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 54330874  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 55209697 - 55209758
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  55209697 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 55209758  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 35381034 - 35381078
Alignment:
Q  38 tcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| || |||||||| |||||||||| |||||||||||||||    
T  35381034 tcaaacaacatcttacatgctaatatttgtatttatatattagtt 35381078  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 38416790 - 38416834
Alignment:
Q  38 tcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| || |||||||| |||||||||| |||||||||||||||    
T  38416790 tcaaacaacatcttacatgctaatatttgtatttatatattagtt 38416834  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000004; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 31610777 - 31610837
Alignment:
Q  22 tatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||| ||||||| || |||||| || ||||||||||||| ||||| |||||||||||||||    
T  31610777 tattcattgagacaaatcaaacaacgtcttacattctaacatttgtatttatatattagtt 31610837  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 5405135 - 5405074
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  5405135 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 5405074  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 7608188 - 7608127
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  7608188 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 7608127  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 8042145 - 8042206
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  8042145 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 8042206  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 19141189 - 19141250
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  19141189 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 19141250  T

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Target: scaffold0225 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 8956 - 9017
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||| ||||||| || |||||| || |||||||| |||| ||||| |||||||||||||||    
T  8956 atattgattgagacaaatcaaacaacatcttacatgctaacatttgtatttatatattagtt 9017  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 138153 - 138214
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    ||||| ||||||| || |||||| || |||||||| |||| ||||| |||||||||||||||    
T  138153 atattgattgagacaaatcaaacaacatcttacatgctaacatttgtatttatatattagtt 138214  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 28061638 - 28061699
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  28061638 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 28061699  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 36623447 - 36623386
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  36623447 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 36623386  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 40090041 - 40090102
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  40090041 atatttgtcgagataaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 40090102  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 42890466 - 42890527
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  42890466 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 42890527  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 47156166 - 47156105
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  47156166 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 47156105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 48602575 - 48602514
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  48602575 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 48602514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 46103510 - 46103554
Alignment:
Q  38 tcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| || |||||||| |||||||||| |||||||||||||||    
T  46103510 tcaaacaacatcttacatgctaatatttgtatttatatattagtt 46103554  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 6563365 - 6563304
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  6563365 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 6563304  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 19088081 - 19088142
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  19088081 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 19088142  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 32414802 - 32414863
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  32414802 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 32414863  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 24624081 - 24624125
Alignment:
Q  38 tcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| || |||||||| |||||||||| |||||||||||||||    
T  24624081 tcaaacaacatcttacatgctaatatttgtatttatatattagtt 24624125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 6402533 - 6402594
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  6402533 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 6402594  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 11641190 - 11641251
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  11641190 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 11641251  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 36757609 - 36757670
Alignment:
Q  21 atatttattgagaaaattcaaaccacttcttacattctaatatttgcatttatatattagtt 82  Q
    |||||| | |||| || |||||| || |||||||| |||||||||| |||||||||||||||    
T  36757609 atatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagtt 36757670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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