View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4932-Insertion-4 (Length: 631)

Name: NF4932-Insertion-4
Description: NF4932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4932-Insertion-4
NF4932-Insertion-4
[»] chr7 (34 HSPs)
chr7 (8-351)||(47039460-47039825)
chr7 (8-205)||(47033176-47033373)
chr7 (8-215)||(44071725-44071932)
chr7 (372-532)||(47039821-47039987)
chr7 (40-215)||(47035261-47035436)
chr7 (566-631)||(763809-763877)
chr7 (566-631)||(35737060-35737128)
chr7 (567-631)||(41910999-41911066)
chr7 (567-631)||(46358632-46358699)
chr7 (567-631)||(47340259-47340326)
chr7 (567-631)||(30884109-30884176)
chr7 (567-631)||(31660181-31660248)
chr7 (25-154)||(37367515-37367644)
chr7 (569-631)||(16933132-16933197)
chr7 (569-631)||(16938515-16938580)
chr7 (573-631)||(48692032-48692093)
chr7 (566-631)||(46572568-46572636)
chr7 (567-631)||(32685839-32685906)
chr7 (568-631)||(15973856-15973922)
chr7 (567-618)||(34228600-34228654)
chr7 (566-601)||(33798748-33798783)
chr7 (531-566)||(47039971-47040006)
chr7 (567-601)||(48830614-48830648)
chr7 (566-601)||(11732036-11732071)
chr7 (566-601)||(12286734-12286769)
chr7 (568-613)||(46025060-46025108)
chr7 (573-601)||(7845112-7845140)
chr7 (573-601)||(26945729-26945757)
chr7 (573-601)||(31365272-31365300)
chr7 (573-601)||(34227677-34227705)
chr7 (573-601)||(38837744-38837772)
chr7 (573-601)||(43742250-43742278)
chr7 (573-601)||(44426599-44426627)
chr7 (573-601)||(46004550-46004578)
[»] chr6 (18 HSPs)
chr6 (566-631)||(7089194-7089262)
chr6 (567-631)||(6900915-6900982)
chr6 (567-631)||(15493286-15493353)
chr6 (567-631)||(34869950-34870017)
chr6 (566-631)||(878372-878440)
chr6 (567-631)||(1449654-1449721)
chr6 (566-631)||(31216774-31216842)
chr6 (567-601)||(7765419-7765453)
chr6 (567-601)||(18755658-18755692)
chr6 (569-615)||(30909437-30909486)
chr6 (571-601)||(20522863-20522893)
chr6 (144-192)||(5338617-5338665)
chr6 (573-601)||(10588968-10588996)
chr6 (573-601)||(14237779-14237807)
chr6 (573-601)||(19284372-19284400)
chr6 (573-601)||(21385004-21385032)
chr6 (573-601)||(22857489-22857517)
chr6 (573-601)||(25119485-25119513)
[»] chr4 (38 HSPs)
chr4 (566-631)||(11786086-11786154)
chr4 (566-631)||(11798253-11798321)
chr4 (566-631)||(49425943-49426011)
chr4 (565-631)||(45256877-45256946)
chr4 (569-631)||(50644652-50644717)
chr4 (570-631)||(13635615-13635679)
chr4 (567-631)||(15051023-15051090)
chr4 (571-631)||(30597811-30597874)
chr4 (567-631)||(49492399-49492466)
chr4 (575-631)||(638976-639035)
chr4 (567-631)||(27865624-27865691)
chr4 (567-631)||(53441432-53441499)
chr4 (566-631)||(46672550-46672618)
chr4 (567-631)||(10473630-10473697)
chr4 (568-631)||(26577257-26577323)
chr4 (573-631)||(51836328-51836389)
chr4 (581-631)||(51921166-51921219)
chr4 (566-615)||(30358835-30358887)
chr4 (583-631)||(35291451-35291502)
chr4 (567-615)||(22180201-22180252)
chr4 (566-601)||(25715637-25715672)
chr4 (601-631)||(1621988-1622018)
chr4 (571-601)||(54895598-54895628)
chr4 (573-601)||(1492673-1492701)
chr4 (573-601)||(2124345-2124373)
chr4 (573-601)||(6841822-6841850)
chr4 (573-601)||(8165763-8165791)
chr4 (573-601)||(12722738-12722766)
chr4 (573-601)||(17109933-17109961)
chr4 (573-601)||(21995671-21995699)
chr4 (573-601)||(30779344-30779372)
chr4 (573-601)||(31762930-31762958)
chr4 (573-601)||(31763123-31763151)
chr4 (573-601)||(33819692-33819720)
chr4 (573-601)||(33883295-33883323)
chr4 (573-601)||(36924242-36924270)
chr4 (573-601)||(37059712-37059740)
chr4 (573-601)||(53865258-53865286)
[»] chr3 (30 HSPs)
chr3 (566-631)||(6097570-6097638)
chr3 (566-631)||(26662424-26662492)
chr3 (566-631)||(30947797-30947865)
chr3 (567-631)||(3475294-3475361)
chr3 (567-631)||(9595867-9595934)
chr3 (567-631)||(19284783-19284850)
chr3 (567-631)||(54379274-54379341)
chr3 (566-631)||(9106379-9106447)
chr3 (566-631)||(10986464-10986532)
chr3 (566-628)||(46237644-46237709)
chr3 (566-627)||(2941812-2941876)
chr3 (574-631)||(50755174-50755234)
chr3 (567-631)||(19384376-19384443)
chr3 (567-631)||(26960738-26960805)
chr3 (567-631)||(33413899-33413967)
chr3 (567-631)||(51361518-51361585)
chr3 (566-617)||(8719133-8719187)
chr3 (566-617)||(9071020-9071074)
chr3 (565-631)||(47335144-47335218)
chr3 (567-601)||(34562394-34562428)
chr3 (570-601)||(17620734-17620765)
chr3 (601-631)||(31853168-31853198)
chr3 (573-601)||(8036801-8036829)
chr3 (573-601)||(12974013-12974041)
chr3 (573-601)||(12974205-12974233)
chr3 (573-601)||(27068533-27068561)
chr3 (573-601)||(36185727-36185755)
chr3 (573-601)||(36185920-36185948)
chr3 (573-601)||(50416481-50416509)
chr3 (573-601)||(50416579-50416607)
[»] chr1 (38 HSPs)
chr1 (566-631)||(48762217-48762285)
chr1 (567-631)||(23817422-23817489)
chr1 (567-631)||(24636038-24636105)
chr1 (566-631)||(16976067-16976135)
chr1 (566-631)||(19897646-19897714)
chr1 (570-631)||(49936827-49936891)
chr1 (567-631)||(43452654-43452721)
chr1 (567-631)||(6314228-6314295)
chr1 (567-631)||(11422552-11422619)
chr1 (567-631)||(20434609-20434676)
chr1 (567-631)||(23920966-23921033)
chr1 (566-631)||(21641588-21641656)
chr1 (567-631)||(18618947-18619013)
chr1 (567-631)||(25888916-25888982)
chr1 (573-631)||(23174403-23174464)
chr1 (567-631)||(180835-180902)
chr1 (567-631)||(4097105-4097171)
chr1 (566-600)||(31084418-31084452)
chr1 (563-601)||(32595298-32595336)
chr1 (567-615)||(21255835-21255886)
chr1 (566-601)||(17893066-17893101)
chr1 (601-631)||(50351915-50351945)
chr1 (567-615)||(18057807-18057858)
chr1 (573-601)||(1395366-1395394)
chr1 (573-601)||(9041066-9041094)
chr1 (573-601)||(9628614-9628642)
chr1 (573-601)||(10974634-10974662)
chr1 (573-601)||(14229173-14229201)
chr1 (573-601)||(17811298-17811326)
chr1 (573-601)||(17893288-17893316)
chr1 (567-595)||(23276984-23277012)
chr1 (573-601)||(29945431-29945459)
chr1 (573-601)||(31763988-31764016)
chr1 (573-601)||(32143784-32143812)
chr1 (573-601)||(33156993-33157021)
chr1 (573-601)||(42133945-42133973)
chr1 (573-601)||(42134148-42134176)
chr1 (573-601)||(49992519-49992547)
[»] scaffold0074 (2 HSPs)
scaffold0074 (567-631)||(24386-24453)
scaffold0074 (567-601)||(44777-44811)
[»] chr5 (24 HSPs)
chr5 (567-631)||(14394580-14394647)
chr5 (567-631)||(14940243-14940310)
chr5 (567-631)||(26637724-26637791)
chr5 (567-631)||(3883922-3883989)
chr5 (567-631)||(37456792-37456859)
chr5 (567-631)||(15416776-15416843)
chr5 (567-631)||(13553095-13553162)
chr5 (567-631)||(30783570-30783636)
chr5 (567-631)||(28069242-28069309)
chr5 (565-601)||(23948596-23948632)
chr5 (566-601)||(23155519-23155554)
chr5 (571-600)||(25671304-25671333)
chr5 (573-601)||(3340591-3340619)
chr5 (573-601)||(11660794-11660822)
chr5 (573-601)||(11660997-11661025)
chr5 (568-615)||(13363792-13363842)
chr5 (573-601)||(15559050-15559078)
chr5 (573-601)||(20134200-20134228)
chr5 (573-601)||(20134414-20134442)
chr5 (573-601)||(22672012-22672040)
chr5 (573-601)||(22695555-22695583)
chr5 (573-601)||(25545587-25545615)
chr5 (573-601)||(35662068-35662096)
chr5 (573-601)||(39861795-39861823)
[»] chr2 (20 HSPs)
chr2 (567-631)||(7487141-7487208)
chr2 (567-631)||(39355147-39355214)
chr2 (566-631)||(1292065-1292133)
chr2 (566-631)||(15016452-15016520)
chr2 (566-631)||(18297162-18297230)
chr2 (567-631)||(8149943-8150010)
chr2 (567-631)||(8154567-8154634)
chr2 (569-631)||(34464823-34464888)
chr2 (8-128)||(34615572-34615692)
chr2 (573-631)||(25193973-25194034)
chr2 (567-601)||(41345082-41345116)
chr2 (601-631)||(4578591-4578621)
chr2 (573-601)||(12449055-12449083)
chr2 (573-601)||(20661397-20661425)
chr2 (573-601)||(24183612-24183640)
chr2 (573-601)||(25575324-25575352)
chr2 (573-601)||(31783794-31783822)
chr2 (573-601)||(31784000-31784028)
chr2 (8-128)||(34622754-34622874)
chr2 (573-601)||(34726605-34726633)
[»] scaffold0571 (1 HSPs)
scaffold0571 (566-631)||(539-607)
[»] chr8 (28 HSPs)
chr8 (566-631)||(4835512-4835580)
chr8 (566-631)||(15227142-15227210)
chr8 (567-628)||(34633208-34633272)
chr8 (567-631)||(1149910-1149977)
chr8 (567-631)||(19784383-19784450)
chr8 (567-631)||(30414026-30414093)
chr8 (567-631)||(41451217-41451284)
chr8 (573-631)||(39657709-39657770)
chr8 (566-627)||(10237470-10237534)
chr8 (575-631)||(1209768-1209827)
chr8 (567-631)||(41099294-41099364)
chr8 (567-631)||(2751217-2751284)
chr8 (583-631)||(4840974-4841025)
chr8 (573-631)||(7059147-7059208)
chr8 (567-601)||(35301624-35301658)
chr8 (567-617)||(15259850-15259903)
chr8 (566-601)||(23397458-23397493)
chr8 (570-601)||(34647169-34647200)
chr8 (570-601)||(40022386-40022417)
chr8 (571-601)||(185880-185910)
chr8 (566-615)||(9853254-9853306)
chr8 (602-631)||(7857792-7857821)
chr8 (573-601)||(15809855-15809883)
chr8 (573-601)||(17656619-17656647)
chr8 (573-601)||(17792907-17792935)
chr8 (573-601)||(23567487-23567515)
chr8 (573-601)||(24473259-24473287)
chr8 (573-601)||(35448625-35448653)
[»] scaffold0045 (1 HSPs)
scaffold0045 (566-631)||(33796-33864)
[»] scaffold0338 (1 HSPs)
scaffold0338 (574-631)||(6495-6555)
[»] scaffold1450 (1 HSPs)
scaffold1450 (573-601)||(751-779)
[»] scaffold0516 (1 HSPs)
scaffold0516 (573-601)||(1263-1291)
[»] scaffold0249 (1 HSPs)
scaffold0249 (573-601)||(23545-23573)
[»] scaffold0129 (1 HSPs)
scaffold0129 (573-601)||(20135-20163)
[»] scaffold0102 (1 HSPs)
scaffold0102 (573-601)||(33617-33645)
[»] scaffold0050 (1 HSPs)
scaffold0050 (569-601)||(20974-21006)


Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 8 - 351
Target Start/End: Original strand, 47039460 - 47039825
Alignment:
Q  8 acaacaagaagaaccgtattgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatgg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47039460 acaacaagaagaaccgtattgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatgg 47039559  T
Q  108 tggtgttttgcccaatattcatcagactttgctccctaagaaggttggaaagggaaaaggagaaattggatctgcttctcaagaattctagggtttctgt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  47039560 tggtgttttgcccaatattcatcagactttgctccctaagaaggttggaaagggaaaaggagaaattggatctgcgtctcaagaattctagggtttctgg 47039659  T
Q  208 gttctgttctagcagaaatgaaatgtagcactctgatgaagtgaatggttttgtactgcacttagt----------------------tgaatatataca 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||    
T  47039660 gttctgttctagcagaaatgaaatgtagcactctgatgaagtgaatggttttgtactgcacttagttgaatatgaatggaaaacattatgaatatataca 47039759  T
Q  286 tgtagcttctattaagcttttattgttcattcgctttaatctggaatctgtggttgttgatacttg 351  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47039760 tgtagcttctattaagcttttattgttcattcgctttaatctgtaatctgtggttgttgatacttg 47039825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 47033176 - 47033373
Alignment:
Q  8 acaacaagaagaaccgtattgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatgg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  47033176 acaacaagaagaaccgtattgtaccaaggcacattcagcttgctgttagaaacgatgaagaactcagcaagcttttaggaactgtgaccattgctaatgg 47033275  T
Q  108 tggtgttttgcccaatattcatcagactttgctccctaagaaggttggaaagggaaaaggagaaattggatctgcttctcaagaattctagggtttct 205  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  47033276 tggtgttctgcccaatattcatcagactttgcttcctaagaaggttggaaagggcaaaggagaaattggatctgcttctcaagaattttagggtttct 47033373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 44071932 - 44071725
Alignment:
Q  8 acaacaagaagaaccgtattgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatgg 107  Q
    ||||||||||||| || ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  44071932 acaacaagaagaatcgaattgttccaaggcatattcagcttgctgtgaggaatgacgaagaactcagcaagcttttgggagctgtaaccattgctaatgg 44071833  T
Q  108 tggtgttttgcccaatattcatcagactttgctccctaagaaggttggaaagggaaaaggagaaattggatctgcttctcaagaattctagggtttctgt 207  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||||| || ||||| ||||||||||||||||||||||| || ||||||||||||    
T  44071832 tggtgttttgcccaatattcatcagacattgcttcctaagaaagttggaaaagggaaaggggaaattggatctgcttctcaagagttttagggtttctgt 44071733  T
Q  208 gttctgtt 215  Q
    || |||||    
T  44071732 gtgctgtt 44071725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 372 - 532
Target Start/End: Original strand, 47039821 - 47039987
Alignment:
Q  372 acttgaaatgagtctgagctttggaataaacaaaccataatttatctttagagttaatttttatgtaaaaagtgtatatgtcccttaa--ttgatctcga 469  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||  ||    
T  47039821 acttgaagtgagtctgagctttggaataaacaaaccataatttatctttagagttaatttttatgtaaaaagtgtatatgtcccttaatttttatcaaga 47039920  T
Q  470 agttaggatcatctgtgtgtgaatatttctttcttcacgtggttg----tgtacccttctgacaagt 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  47039921 agttaggatcatctgtgtgtgaatatttctttcttcacgtggttggttatgtacccttctgacaagt 47039987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 40 - 215
Target Start/End: Complemental strand, 47035436 - 47035261
Alignment:
Q  40 attcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatggtggtgttttgcccaatattcatcagactttgc 139  Q
    ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  47035436 attcaacttgctgttaggaacgatgaagaactaagcaagcttttgggagctgtaaccattgctaatggtggtgttttgcctaacattcatcagactttgc 47035337  T
Q  140 tccctaagaaggttggaaagggaaaaggagaaattggatctgcttctcaagaattctagggtttctgtgttctgtt 215  Q
    | || ||||||  ||| ||||||||||  |||||||||||||||||||||||||| |||||||| |||| ||||||    
T  47035336 tgccaaagaagtctgggaagggaaaagccgaaattggatctgcttctcaagaattttagggtttatgtgatctgtt 47035261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 763877 - 763809
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  763877 cgggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttccta 763809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 35737128 - 35737060
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  35737128 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 35737060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 41910999 - 41911066
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  41910999 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 41911066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 46358699 - 46358632
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  46358699 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 46358632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 47340326 - 47340259
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  47340326 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 47340259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 30884109 - 30884176
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||    
T  30884109 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttccta 30884176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 31660248 - 31660181
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  31660248 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttccta 31660181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 37367644 - 37367515
Alignment:
Q  25 attgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatggtggtgttttgcccaata 124  Q
    ||||||||||||||| |||| || || ||||||||||| || ||| | |||||  | ||||||  |||||| ||||||||||||||||||||||| || |    
T  37367644 attgtaccaaggcaccttcaactcgctgtgaggaacgatgaagaattgagcaaattgttgggacatgtgactattgctaatggtggtgttttgcctaaca 37367545  T
Q  125 ttcatcagactttgctccctaagaaggttg 154  Q
    |||| ||||||||| | || ||||||||||    
T  37367544 ttcaccagactttgttgccaaagaaggttg 37367515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 16933132 - 16933197
Alignment:
Q  569 gagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  16933132 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttccta 16933197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 16938515 - 16938580
Alignment:
Q  569 gagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  16938515 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttccta 16938580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 573 - 631
Target Start/End: Complemental strand, 48692093 - 48692032
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  48692093 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 48692032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 46572568 - 46572636
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||| ||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||    
T  46572568 cgggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttccta 46572636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 32685839 - 32685906
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttat---gcgtgcataaatcccaacataattgcttccta 631  Q
    ||||| |||||||||||||||||||||||||||    |||||||||||| ||||||||||||||||||    
T  32685839 gggagcggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttccta 32685906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 568 - 631
Target Start/End: Original strand, 15973856 - 15973922
Alignment:
Q  568 ggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||| ||||||||||||||||||||||||||||   | |||||||||||||||||| ||||||||||    
T  15973856 ggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttccta 15973922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 567 - 618
Target Start/End: Original strand, 34228600 - 34228654
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaaca 618  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||||||||    
T  34228600 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 601
Target Start/End: Complemental strand, 33798783 - 33798748
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||||||||||||||||||||||||||||||||    
T  33798783 cgggagtggttatggtgcataaggaaatccttatgc 33798748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 531 - 566
Target Start/End: Original strand, 47039971 - 47040006
Alignment:
Q  531 gtacccttctgacaagtcctttgtctgtttctctgc 566  Q
    ||||||||||||||||||||||||||||||||||||    
T  47039971 gtacccttctgacaagtcctttgtctgtttctctgc 47040006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 601
Target Start/End: Complemental strand, 48830648 - 48830614
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||||||    
T  48830648 gggagtggttatggtgcataaggaaatccttatgc 48830614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 601
Target Start/End: Original strand, 11732036 - 11732071
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||| |||||||||||||||||||||||||||||    
T  11732036 cgggagcggttatggtgcataaggaaatccttatgc 11732071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 601
Target Start/End: Complemental strand, 12286769 - 12286734
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12286769 cgggagtggttatggtgcataaggaaatctttatgc 12286734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 613
Target Start/End: Complemental strand, 46025108 - 46025060
Alignment:
Q  568 ggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcc 613  Q
    |||||||||||||||||||||||||||| ||||   |||||||||||||    
T  46025108 ggagtggttatggtgcataaggaaatccctatgcaccgtgcataaatcc 46025060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 7845140 - 7845112
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  7845140 ggttatggtgcataaggaaatccttatgc 7845112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 26945757 - 26945729
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  26945757 ggttatggtgcataaggaaatccttatgc 26945729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 31365272 - 31365300
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  31365272 ggttatggtgcataaggaaatccttatgc 31365300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 34227677 - 34227705
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  34227677 ggttatggtgcataaggaaatccttatgc 34227705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 38837772 - 38837744
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  38837772 ggttatggtgcataaggaaatccttatgc 38837744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 43742250 - 43742278
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  43742250 ggttatggtgcataaggaaatccttatgc 43742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 44426599 - 44426627
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  44426599 ggttatggtgcataaggaaatccttatgc 44426627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 46004578 - 46004550
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  46004578 ggttatggtgcataaggaaatccttatgc 46004550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 7089262 - 7089194
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  7089262 cgggagtggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttccta 7089194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 6900982 - 6900915
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  6900982 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 6900915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 15493353 - 15493286
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  15493353 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 15493286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 34869950 - 34870017
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||    
T  34869950 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttccta 34870017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 878440 - 878372
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||    
T  878440 cgggagcggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttccta 878372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 1449721 - 1449654
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| ||||||    
T  1449721 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttccta 1449654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 31216842 - 31216774
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||| |||||||||||||||||||||| ||||||   |||| |||||| |||||||||||||||||||    
T  31216842 cgggaatggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttccta 31216774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 601
Target Start/End: Complemental strand, 7765453 - 7765419
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||||||    
T  7765453 gggagtggttatggtgcataaggaaatccttatgc 7765419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 601
Target Start/End: Original strand, 18755658 - 18755692
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||||||    
T  18755658 gggagtggttatggtgcataaggaaatccttatgc 18755692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 615
Target Start/End: Complemental strand, 30909486 - 30909437
Alignment:
Q  569 gagtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 615  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  30909486 gagtggttatggtgcataaggaattccttatgcaccgtgcataaatccca 30909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 601
Target Start/End: Complemental strand, 20522893 - 20522863
Alignment:
Q  571 gtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||    
T  20522893 gtggttatggtgcataaggaaatccttatgc 20522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 5338665 - 5338617
Alignment:
Q  144 taagaaggttggaaagggaaaaggagaaattggatctgcttctcaagaa 192  Q
    |||||| |||||||| |||||| | |||||||||| |||||||||||||    
T  5338665 taagaacgttggaaaaggaaaaagcgaaattggatatgcttctcaagaa 5338617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 10588996 - 10588968
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  10588996 ggttatggtgcataaggaaatccttatgc 10588968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 14237779 - 14237807
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  14237779 ggttatggtgcataaggaaatccttatgc 14237807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 19284372 - 19284400
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  19284372 ggttatggtgcataaggaaatccttatgc 19284400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 21385032 - 21385004
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  21385032 ggttatggtgcataaggaaatccttatgc 21385004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 22857489 - 22857517
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  22857489 ggttatggtgcataaggaaatccttatgc 22857517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 25119513 - 25119485
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  25119513 ggttatggtgcataaggaaatccttatgc 25119485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 11786154 - 11786086
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  11786154 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 11786086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 11798321 - 11798253
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  11798321 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 11798253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 49425943 - 49426011
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  49425943 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 49426011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 565 - 631
Target Start/End: Complemental strand, 45256946 - 45256877
Alignment:
Q  565 gcgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  45256946 gcgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 45256877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 50644717 - 50644652
Alignment:
Q  569 gagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  50644717 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 50644652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 13635615 - 13635679
Alignment:
Q  570 agtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  13635615 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 13635679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 15051023 - 15051090
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||    
T  15051023 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttccta 15051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 631
Target Start/End: Complemental strand, 30597874 - 30597811
Alignment:
Q  571 gtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  30597874 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 30597811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 49492399 - 49492466
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  49492399 gggagtagttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 49492466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 575 - 631
Target Start/End: Complemental strand, 639035 - 638976
Alignment:
Q  575 ttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 638976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 27865624 - 27865691
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||| |||||||||||||||||   | |||||||||||||||||||||||||||||    
T  27865624 gggagtggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttccta 27865691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 53441499 - 53441432
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   || |||||||| |||||||||||||||||||    
T  53441499 gggagtggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttccta 53441432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 46672618 - 46672550
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||| ||||||||||||| ||||||   ||||||||||||||||||| |||||||||||    
T  46672618 cgggagtggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttccta 46672550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 10473697 - 10473630
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||||||||||||   ||||||||||| ||||| |||||||||||||    
T  10473697 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttccta 10473630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 568 - 631
Target Start/End: Original strand, 26577257 - 26577323
Alignment:
Q  568 ggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||  ||||||||||||||||||    
T  26577257 ggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttccta 26577323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 573 - 631
Target Start/End: Original strand, 51836328 - 51836389
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||  ||||||   ||||||||||||||||||||||||||||||    
T  51836328 ggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttccta 51836389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 631
Target Start/End: Original strand, 51921166 - 51921219
Alignment:
Q  581 tgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 51921219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 566 - 615
Target Start/End: Complemental strand, 30358887 - 30358835
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 615  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  30358887 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 30358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 583 - 631
Target Start/End: Original strand, 35291451 - 35291502
Alignment:
Q  583 cataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 35291502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 567 - 615
Target Start/End: Original strand, 22180201 - 22180252
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 615  Q
    ||||| ||||||||||||||||||||||||||||   |||||||||||||||    
T  22180201 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 22180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 601
Target Start/End: Original strand, 25715637 - 25715672
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||| |||||||||||||||||||||||||||||||    
T  25715637 cgggcgtggttatggtgcataaggaaatccttatgc 25715672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 631
Target Start/End: Complemental strand, 1622018 - 1621988
Alignment:
Q  601 cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||    
T  1622018 cgtgcataaatcccaacataattgcttccta 1621988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 601
Target Start/End: Complemental strand, 54895628 - 54895598
Alignment:
Q  571 gtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||    
T  54895628 gtggttatggtgcataaggaaatccttatgc 54895598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 1492673 - 1492701
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  1492673 ggttatggtgcataaggaaatccttatgc 1492701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 2124345 - 2124373
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  2124345 ggttatggtgcataaggaaatccttatgc 2124373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 6841822 - 6841850
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  6841822 ggttatggtgcataaggaaatccttatgc 6841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 8165763 - 8165791
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  8165763 ggttatggtgcataaggaaatccttatgc 8165791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 12722738 - 12722766
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  12722738 ggttatggtgcataaggaaatccttatgc 12722766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 17109961 - 17109933
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  17109961 ggttatggtgcataaggaaatccttatgc 17109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 21995671 - 21995699
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  21995671 ggttatggtgcataaggaaatccttatgc 21995699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 30779344 - 30779372
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  30779344 ggttatggtgcataaggaaatccttatgc 30779372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 31762930 - 31762958
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  31762930 ggttatggtgcataaggaaatccttatgc 31762958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 31763151 - 31763123
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  31763151 ggttatggtgcataaggaaatccttatgc 31763123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 33819692 - 33819720
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  33819692 ggttatggtgcataaggaaatccttatgc 33819720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 33883295 - 33883323
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  33883295 ggttatggtgcataaggaaatccttatgc 33883323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 36924242 - 36924270
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  36924242 ggttatggtgcataaggaaatccttatgc 36924270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 37059712 - 37059740
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  37059712 ggttatggtgcataaggaaatccttatgc 37059740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 53865286 - 53865258
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  53865286 ggttatggtgcataaggaaatccttatgc 53865258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 6097570 - 6097638
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  6097570 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 6097638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 26662424 - 26662492
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  26662424 cgggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttccta 26662492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 30947797 - 30947865
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  30947797 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 30947865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 3475294 - 3475361
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  3475294 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 3475361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 9595867 - 9595934
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  9595867 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 9595934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 19284850 - 19284783
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  19284850 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 19284783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 54379341 - 54379274
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  54379341 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 54379274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 9106447 - 9106379
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  9106447 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttccta 9106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 10986532 - 10986464
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  10986532 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttccta 10986464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 566 - 628
Target Start/End: Original strand, 46237644 - 46237709
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttat---gcgtgcataaatcccaacataattgcttc 628  Q
    ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||    
T  46237644 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttc 46237709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 627
Target Start/End: Original strand, 2941812 - 2941876
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgctt 627  Q
    |||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  2941812 cgggagtgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctt 2941876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 574 - 631
Target Start/End: Complemental strand, 50755234 - 50755174
Alignment:
Q  574 gttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  50755234 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 50755174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 19384376 - 19384443
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||    
T  19384376 gggagcggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttccta 19384443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 26960805 - 26960738
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||| |||||   |||||||||||||||| ||||||||||||||    
T  26960805 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttccta 26960738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 33413899 - 33413967
Alignment:
Q  567 gggagtggttatggtgcataaggaaat-ccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||||||||||||||    
T  33413899 gggagtggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttccta 33413967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 51361518 - 51361585
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||||||||||||   |||| |||||||| |||||||||||||||||    
T  51361518 gggagcggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttccta 51361585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 566 - 617
Target Start/End: Complemental strand, 8719187 - 8719133
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaac 617  Q
    |||||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  8719187 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 566 - 617
Target Start/End: Complemental strand, 9071074 - 9071020
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaac 617  Q
    |||||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  9071074 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 565 - 631
Target Start/End: Complemental strand, 47335218 - 47335144
Alignment:
Q  565 gcgggagtggttatggtgcataaggaaat-----ccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||     |||||||   |||||||||||||||||||||||| ||||||    
T  47335218 gcgggagtggttatggtgcataaggaaatcctttccttatgcaccgtgcataaatcccaacataattgtttccta 47335144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 601
Target Start/End: Original strand, 34562394 - 34562428
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||||||    
T  34562394 gggagtggttatggtgcataaggaaatccttatgc 34562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 601
Target Start/End: Original strand, 17620734 - 17620765
Alignment:
Q  570 agtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||||||||||||||||||||||||||||    
T  17620734 agtggttatggtgcataaggaaatccttatgc 17620765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 631
Target Start/End: Complemental strand, 31853198 - 31853168
Alignment:
Q  601 cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||    
T  31853198 cgtgcataaatcccaacataattgcttccta 31853168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 8036801 - 8036829
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  8036801 ggttatggtgcataaggaaatccttatgc 8036829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 12974013 - 12974041
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  12974013 ggttatggtgcataaggaaatccttatgc 12974041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 12974233 - 12974205
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  12974233 ggttatggtgcataaggaaatccttatgc 12974205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 27068533 - 27068561
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  27068533 ggttatggtgcataaggaaatccttatgc 27068561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 36185727 - 36185755
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  36185727 ggttatggtgcataaggaaatccttatgc 36185755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 36185948 - 36185920
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  36185948 ggttatggtgcataaggaaatccttatgc 36185920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 50416481 - 50416509
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  50416481 ggttatggtgcataaggaaatccttatgc 50416509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 50416607 - 50416579
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  50416607 ggttatggtgcataaggaaatccttatgc 50416579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 48762217 - 48762285
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  48762217 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 48762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 23817489 - 23817422
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  23817489 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 23817422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 24636105 - 24636038
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  24636105 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 24636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 16976135 - 16976067
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||    
T  16976135 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttccta 16976067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 19897646 - 19897714
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||    
T  19897646 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttccta 19897714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 570 - 631
Target Start/End: Original strand, 49936827 - 49936891
Alignment:
Q  570 agtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  49936827 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 49936891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 43452721 - 43452654
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||    
T  43452721 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttccta 43452654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 6314295 - 6314228
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||  ||||||||||||||||||||||||||    
T  6314295 gggagtggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttccta 6314228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 11422619 - 11422552
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||    
T  11422619 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttccta 11422552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 20434609 - 20434676
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||| |||||   | |||||||||||||||||||||||||||||    
T  20434609 gggagtggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttccta 20434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 23920966 - 23921033
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttccta 23921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 21641588 - 21641656
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||| ||||||| ||||||||||||||||||||   |||||| ||||||||||||||||||||||||    
T  21641588 cgggagcggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttccta 21641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 18619013 - 18618947
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||| |||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||    
T  18619013 gggagtagttatggtgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttccta 18618947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 25888916 - 25888982
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||| |||||||||   |||||||||||| |||||||||||||||||    
T  25888916 gggagtggttatggtgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttccta 25888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 573 - 631
Target Start/End: Original strand, 23174403 - 23174464
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||| |||| |||||||   ||||||||||||||||||||||||||||||    
T  23174403 ggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttccta 23174464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 180902 - 180835
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||| |||||||||| |||| |||||||||||||   ||| ||||||||||||||||||||||||||    
T  180902 gggagcggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttccta 180835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 4097105 - 4097171
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||| |||||||||   |||| |||||||||||||||||||||||||    
T  4097105 gggagcggttatggtgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttccta 4097171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 600
Target Start/End: Complemental strand, 31084452 - 31084418
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg 600  Q
    |||||||||||||||||||||||||||||||||||    
T  31084452 cgggagtggttatggtgcataaggaaatccttatg 31084418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 563 - 601
Target Start/End: Complemental strand, 32595336 - 32595298
Alignment:
Q  563 ctgcgggagtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  32595336 ctgcgggcgtggttatggtgcataaggaaatccttatgc 32595298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 567 - 615
Target Start/End: Original strand, 21255835 - 21255886
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttat---gcgtgcataaatccca 615  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||    
T  21255835 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 21255886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 601
Target Start/End: Original strand, 17893066 - 17893101
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||| |||||||||||||||||||||||||||||||    
T  17893066 cgggcgtggttatggtgcataaggaaatccttatgc 17893101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 631
Target Start/End: Complemental strand, 50351945 - 50351915
Alignment:
Q  601 cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||    
T  50351945 cgtgcataaatcccaacataattgcttccta 50351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 615
Target Start/End: Complemental strand, 18057858 - 18057807
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 615  Q
    ||||| |||||||||| |||||||||||||||||   |||||||||||||||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaatccca 18057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 1395394 - 1395366
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  1395394 ggttatggtgcataaggaaatccttatgc 1395366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 9041094 - 9041066
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  9041094 ggttatggtgcataaggaaatccttatgc 9041066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 9628642 - 9628614
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  9628642 ggttatggtgcataaggaaatccttatgc 9628614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 10974634 - 10974662
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  10974634 ggttatggtgcataaggaaatccttatgc 10974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 14229173 - 14229201
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  14229173 ggttatggtgcataaggaaatccttatgc 14229201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 17811326 - 17811298
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  17811326 ggttatggtgcataaggaaatccttatgc 17811298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 17893316 - 17893288
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  17893316 ggttatggtgcataaggaaatccttatgc 17893288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 595
Target Start/End: Original strand, 23276984 - 23277012
Alignment:
Q  567 gggagtggttatggtgcataaggaaatcc 595  Q
    |||||||||||||||||||||||||||||    
T  23276984 gggagtggttatggtgcataaggaaatcc 23277012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 29945459 - 29945431
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  29945459 ggttatggtgcataaggaaatccttatgc 29945431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 31764016 - 31763988
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  31764016 ggttatggtgcataaggaaatccttatgc 31763988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 32143812 - 32143784
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  32143812 ggttatggtgcataaggaaatccttatgc 32143784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 33156993 - 33157021
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  33156993 ggttatggtgcataaggaaatccttatgc 33157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 42133945 - 42133973
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  42133945 ggttatggtgcataaggaaatccttatgc 42133973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 42134176 - 42134148
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  42134176 ggttatggtgcataaggaaatccttatgc 42134148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 49992519 - 49992547
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  49992519 ggttatggtgcataaggaaatccttatgc 49992547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 24453 - 24386
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  24453 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 24386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 601
Target Start/End: Original strand, 44777 - 44811
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||||||||||||||||||||||| |||||||    
T  44777 gggagtggttatggtgcataaggaaattcttatgc 44811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 14394647 - 14394580
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  14394647 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 14394580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 14940243 - 14940310
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  14940243 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 14940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 26637724 - 26637791
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  26637724 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 26637791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 3883922 - 3883989
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  3883922 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttccta 3883989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 37456859 - 37456792
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||    
T  37456859 gggagtggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttccta 37456792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 15416843 - 15416776
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||| ||||||||||||||||||||   ||||||||||||||||||| |||||||||||    
T  15416843 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttccta 15416776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 13553162 - 13553095
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||| |||||||| || ||||||||||||||    
T  13553162 gggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttccta 13553095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 30783636 - 30783570
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||| ||||||||||||||||||||   ||||||||||| |||||||||||||||||||    
T  30783636 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaat-ccaacataattgcttccta 30783570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 28069242 - 28069309
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||| |||||||||| |||||||||||||||||   || |||||||| |||||||||||||||||||    
T  28069242 gggagcggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttccta 28069309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 601
Target Start/End: Complemental strand, 23948632 - 23948596
Alignment:
Q  565 gcgggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23948632 gcgggagtggttatggtgcataagaaaatccttatgc 23948596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 601
Target Start/End: Original strand, 23155519 - 23155554
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||| |||||||||||||||||||||||||||||||    
T  23155519 cgggtgtggttatggtgcataaggaaatccttatgc 23155554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 600
Target Start/End: Complemental strand, 25671333 - 25671304
Alignment:
Q  571 gtggttatggtgcataaggaaatccttatg 600  Q
    ||||||||||||||||||||||||||||||    
T  25671333 gtggttatggtgcataaggaaatccttatg 25671304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 3340591 - 3340619
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  3340591 ggttatggtgcataaggaaatccttatgc 3340619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 11660794 - 11660822
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  11660794 ggttatggtgcataaggaaatccttatgc 11660822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 11661025 - 11660997
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  11661025 ggttatggtgcataaggaaatccttatgc 11660997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 568 - 615
Target Start/End: Complemental strand, 13363842 - 13363792
Alignment:
Q  568 ggagtggttatggtgcataaggaaatccttatg---cgtgcataaatccca 615  Q
    |||| |||||||||||| |||||||||||||||   |||||||||||||||    
T  13363842 ggagcggttatggtgcacaaggaaatccttatgcaccgtgcataaatccca 13363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 15559050 - 15559078
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  15559050 ggttatggtgcataaggaaatccttatgc 15559078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 20134200 - 20134228
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  20134200 ggttatggtgcataaggaaatccttatgc 20134228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 20134442 - 20134414
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  20134442 ggttatggtgcataaggaaatccttatgc 20134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 22672040 - 22672012
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  22672040 ggttatggtgcataaggaaatccttatgc 22672012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 22695583 - 22695555
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  22695583 ggttatggtgcataaggaaatccttatgc 22695555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 25545615 - 25545587
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  25545615 ggttatggtgcataaggaaatccttatgc 25545587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 35662068 - 35662096
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  35662068 ggttatggtgcataaggaaatccttatgc 35662096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 39861823 - 39861795
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  39861823 ggttatggtgcataaggaaatccttatgc 39861795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 7487141 - 7487208
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  7487141 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 7487208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 39355214 - 39355147
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  39355214 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 39355147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 1292065 - 1292133
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||    
T  1292065 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttccta 1292133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 15016452 - 15016520
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||||| ||||||||||||||||||    
T  15016452 cgggagtggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttccta 15016520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 18297162 - 18297230
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||| |||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||    
T  18297162 cgggagcggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 18297230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 8150010 - 8149943
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||||||    
T  8150010 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttccta 8149943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 8154634 - 8154567
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||||||    
T  8154634 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttccta 8154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 34464888 - 34464823
Alignment:
Q  569 gagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||| ||||||||||||||||||   ||||||||||||| |||||||||||||||||    
T  34464888 gagtggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttccta 34464823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 34615572 - 34615692
Alignment:
Q  8 acaacaagaagaaccgtattgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatgg 107  Q
    ||||||||||||   | ||||| ||||| ||||||||  | || ||||||||||| || ||| | ||||||||| | ||   ||| ||||||||||||||    
T  34615572 acaacaagaagacaagaattgtgccaagacacattcaattggctgtgaggaacgatgaagaattgagcaagcttcttggtgatgttaccattgctaatgg 34615671  T
Q  108 tggtgttttgcccaatattca 128  Q
    ||||||| |||||||||||||    
T  34615672 tggtgttatgcccaatattca 34615692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 631
Target Start/End: Complemental strand, 25194034 - 25193973
Alignment:
Q  573 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||| ||||||||||||   |||||||||||||||| ||||||| ||||||    
T  25194034 ggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttccta 25193973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 601
Target Start/End: Original strand, 41345082 - 41345116
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||||||    
T  41345082 gggagtggttatggtgcataaggaaatccttatgc 41345116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 631
Target Start/End: Original strand, 4578591 - 4578621
Alignment:
Q  601 cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||    
T  4578591 cgtgcataaatcccaacataattgcttccta 4578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 12449055 - 12449083
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  12449055 ggttatggtgcataaggaaatccttatgc 12449083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 20661397 - 20661425
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  20661397 ggttatggtgcataaggaaatccttatgc 20661425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 24183640 - 24183612
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  24183640 ggttatggtgcataaggaaatccttatgc 24183612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 25575324 - 25575352
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  25575324 ggttatggtgcataaggaaatccttatgc 25575352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 31783794 - 31783822
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  31783794 ggttatggtgcataaggaaatccttatgc 31783822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 31784028 - 31784000
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  31784028 ggttatggtgcataaggaaatccttatgc 31784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 34622754 - 34622874
Alignment:
Q  8 acaacaagaagaaccgtattgtaccaaggcacattcagcttgcagtgaggaacgacgaggaactcagcaagcttttgggaactgtgaccattgctaatgg 107  Q
    ||||||||||||   | ||||| ||||| ||||||||  | || ||||||||||| || ||| | ||||||||| | ||   ||| || |||||||||||    
T  34622754 acaacaagaagacaagaattgtgccaagacacattcaattggctgtgaggaacgatgaagaattgagcaagcttcttggtgatgttactattgctaatgg 34622853  T
Q  108 tggtgttttgcccaatattca 128  Q
    ||||||| |||| ||||||||    
T  34622854 tggtgttatgccaaatattca 34622874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 34726605 - 34726633
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  34726605 ggttatggtgcataaggaaatccttatgc 34726633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 539 - 607
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  539 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttccta 607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 4835512 - 4835580
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  4835512 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 4835580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 15227210 - 15227142
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||    
T  15227210 cgggagtggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttccta 15227142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 567 - 628
Target Start/End: Original strand, 34633208 - 34633272
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttc 628  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  34633208 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttc 34633272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Original strand, 1149910 - 1149977
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||    
T  1149910 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttccta 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 19784450 - 19784383
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  19784450 gggagtggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttccta 19784383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 30414093 - 30414026
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  30414093 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttccta 30414026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 41451284 - 41451217
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  41451284 gggagtggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttccta 41451217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 573 - 631
Target Start/End: Original strand, 39657709 - 39657770
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  39657709 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 39657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 627
Target Start/End: Complemental strand, 10237534 - 10237470
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgctt 627  Q
    |||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||    
T  10237534 cgggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctt 10237470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 575 - 631
Target Start/End: Complemental strand, 1209827 - 1209768
Alignment:
Q  575 ttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 1209768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 41099364 - 41099294
Alignment:
Q  567 gggagtggttatggtgcataaggaaatc---cttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||   |||||||   ||||||||||||||||||||||||||||||    
T  41099364 gggagtggttatggtgcataaggaaatcatccttatgcaccgtgcataaatcccaacataattgcttccta 41099294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 631
Target Start/End: Complemental strand, 2751284 - 2751217
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||| |||||||||||||||| ||||||||||||   |||||| |||||||||||||||||||||||    
T  2751284 gggagcggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttccta 2751217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 583 - 631
Target Start/End: Original strand, 4840974 - 4841025
Alignment:
Q  583 cataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 4841025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 631
Target Start/End: Complemental strand, 7059208 - 7059147
Alignment:
Q  573 ggttatggtgcataaggaaatccttatg---cgtgcataaatcccaacataattgcttccta 631  Q
    |||||||||||||||||||||| |||||   ||||||||||| |||||||||||| ||||||    
T  7059208 ggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttccta 7059147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 601
Target Start/End: Original strand, 35301624 - 35301658
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||||||    
T  35301624 gggagtggttatggtgcataaggaaatccttatgc 35301658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 567 - 617
Target Start/End: Original strand, 15259850 - 15259903
Alignment:
Q  567 gggagtggttatggtgcataaggaaatccttatg---cgtgcataaatcccaac 617  Q
    ||||| |||||||| |||||||||||||||||||   |||||||||||||||||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

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Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 601
Target Start/End: Complemental strand, 23397493 - 23397458
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc 601  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23397493 cgggaatggttatggtgcataaggaaatccttatgc 23397458  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 601
Target Start/End: Original strand, 34647169 - 34647200
Alignment:
Q  570 agtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||||||||||||||||||||||||||||    
T  34647169 agtggttatggtgcataaggaaatccttatgc 34647200  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 601
Target Start/End: Original strand, 40022386 - 40022417
Alignment:
Q  570 agtggttatggtgcataaggaaatccttatgc 601  Q
    ||||||||||||||||||||||||||||||||    
T  40022386 agtggttatggtgcataaggaaatccttatgc 40022417  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 601
Target Start/End: Original strand, 185880 - 185910
Alignment:
Q  571 gtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||||    
T  185880 gtggttatggtgcataaggaaatccttatgc 185910  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 615
Target Start/End: Complemental strand, 9853306 - 9853254
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc---gtgcataaatccca 615  Q
    ||||||||||||||||||||||  ||||||||||||   ||||||||||||||    
T  9853306 cgggagtggttatggtgcataaaaaaatccttatgcactgtgcataaatccca 9853254  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 631
Target Start/End: Complemental strand, 7857821 - 7857792
Alignment:
Q  602 gtgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttccta 7857792  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 15809883 - 15809855
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  15809883 ggttatggtgcataaggaaatccttatgc 15809855  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 17656619 - 17656647
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  17656619 ggttatggtgcataaggaaatccttatgc 17656647  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 17792935 - 17792907
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  17792935 ggttatggtgcataaggaaatccttatgc 17792907  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 23567487 - 23567515
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  23567487 ggttatggtgcataaggaaatccttatgc 23567515  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 24473287 - 24473259
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  24473287 ggttatggtgcataaggaaatccttatgc 24473259  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 35448653 - 35448625
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  35448653 ggttatggtgcataaggaaatccttatgc 35448625  T

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Target: scaffold0045 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 33864 - 33796
Alignment:
Q  566 cgggagtggttatggtgcataaggaaatccttatgc---gtgcataaatcccaacataattgcttccta 631  Q
    ||||| ||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  33864 cgggattggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttccta 33796  T

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Target: scaffold0338 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 574 - 631
Target Start/End: Complemental strand, 6555 - 6495
Alignment:
Q  574 gttatggtgcataaggaaatccttatgcg---tgcataaatcccaacataattgcttccta 631  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttccta 6495  T

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Target: scaffold1450 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 751 - 779
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  751 ggttatggtgcataaggaaatccttatgc 779  T

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Target: scaffold0516 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 1291 - 1263
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  1291 ggttatggtgcataaggaaatccttatgc 1263  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 23545 - 23573
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  23545 ggttatggtgcataaggaaatccttatgc 23573  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Complemental strand, 20163 - 20135
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  20163 ggttatggtgcataaggaaatccttatgc 20135  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 601
Target Start/End: Original strand, 33617 - 33645
Alignment:
Q  573 ggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||||||||||||    
T  33617 ggttatggtgcataaggaaatccttatgc 33645  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 601
Target Start/End: Original strand, 20974 - 21006
Alignment:
Q  569 gagtggttatggtgcataaggaaatccttatgc 601  Q
    |||||||||||||||||||| ||||||||||||    
T  20974 gagtggttatggtgcataagaaaatccttatgc 21006  T

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