View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4932-Insertion-8 (Length: 277)
Name: NF4932-Insertion-8
Description: NF4932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4932-Insertion-8 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 4329315 - 4329085
Alignment:
| Q |
10 |
tggctcaacttgcaatgcttgagacagaaaaagttcgtcttacggattatttggatgaaagatctgaatatttgacacagtttggtgaagaagctaaagc |
109 |
Q |
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| T |
4329315 |
tggctcaacttgcaatgcttgagacagaaaaagttcgtcttacggattatttggatgaaagatctgaatatttgacacagtttggtgaagaagctaaagc |
4329216 |
T |
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| Q |
110 |
tgaaattgataagattggtgaagatgctcttaaaggattagatgaagctagtgatagagtatgtatgcacttttcactcactctttacttgttcaatttg |
209 |
Q |
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| T |
4329215 |
tgaaattgataagattggtgaagatgctcttaaaggattagatgaagctagtgatagagtatgtatgcacttttcactcactatttacttgttcaatttg |
4329116 |
T |
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| Q |
210 |
ttaaccatgcatagattctagttagctacag |
240 |
Q |
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| T |
4329115 |
ttaaccatgcatacattctagttagctacag |
4329085 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 24493345 - 24493236
Alignment:
| Q |
63 |
gatgaaagatctgaatatttgacacagtttggtgaagaagctaaagctgaaattgataagattggtgaagatgctcttaaaggattagatgaagctagtg |
162 |
Q |
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||||| ||||||| ||| || || || ||||||||| |||| || |||| |||| |||||||| |||||||| || |||| ||||||||||||||||| |
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| T |
24493345 |
gatgagagatctgcatacttaactcaatttggtgaaaaagcaaactctgagtttgaaaagattggagaagatgcactcaaagaattagatgaagctagtg |
24493246 |
T |
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| Q |
163 |
atagagtatg |
172 |
Q |
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|||||||| |
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| T |
24493245 |
ccagagtatg |
24493236 |
T |
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