View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4932_low_4 (Length: 320)
Name: NF4932_low_4
Description: NF4932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4932_low_4 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 133; Significance: 4e-69; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 36607544 - 36607719
Alignment:
| Q |
127 |
ggtgatgcagtctacgtgtggtgatcttcaaatctaaggtcatggtttatgatttgatggtgattttggtggttgttagtgataggtatcacgagtggtg |
226 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
36607544 |
ggtgatgcagtctacgtgtggtgatcttcaaatctaaggtcatggtttatgat-----------tttggtggttgttagtgatgggtatcacgagtggtg |
36607632 |
T |
 |
| Q |
227 |
gtgttttgatgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatgat |
313 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
36607633 |
gtgttttggtgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtgatagtgagttcgggggtgtggtgatgatgatgat |
36607719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 27631838 - 27631973
Alignment:
| Q |
68 |
gtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatcttcaaatctaaggtc |
167 |
Q |
| |
|
|||| ||||||||||| |||||| ||||||| ||| |||||| | |||| | ||| ||||||| ||||| | ||||||||||| || ||||||||| |
|
|
| T |
27631838 |
gttttgaatggaggtggtgcagggagtggtgatgccatcttgggtgatgtccacatggtggtgatgtagtctgcatgtggtgatct-cagatctaaggta |
27631936 |
T |
 |
| Q |
168 |
atggtttat-gatttgatggtgattttggtggttgtt |
203 |
Q |
| |
|
||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
27631937 |
atgatttattgagttgatggtgattttggtggttgtt |
27631973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 27631976 - 27632018
Alignment:
| Q |
236 |
tgttgagttgggaggcgaaatgttcaatgtctctttctcgtgt |
278 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
27631976 |
tgttgagttgggaggcgaaatgttcattgtctctttcttgtgt |
27632018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 36607505 - 36607553
Alignment:
| Q |
42 |
agtggtggtgctgttgtttttg-gtaagtttcgaatggaggtgatgcag |
89 |
Q |
| |
|
||||||||||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
36607505 |
agtggtggtgctgctgtttttttgtaagttttgaatggaggtgatgcag |
36607553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 49 - 314
Target Start/End: Complemental strand, 12888742 - 12888482
Alignment:
| Q |
49 |
gtgctgttgtttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtgg |
147 |
Q |
| |
|
|||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| | | |||| |||||| ||||||||||||| ||||||| |
|
|
| T |
12888742 |
gtgctgctgtttttggtgaagtttcaaatggaggtgatgcagggagtggtgttgctgtcttaggtgatgtccaagtggtggtgatgcagtctgcgtgtgg |
12888643 |
T |
 |
| Q |
148 |
tgatcttcaaatctaaggtcatggttta-tgatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgg |
246 |
Q |
| |
|
||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||| |||||||| |||||||| | ||| ||||||||||| |
|
|
| T |
12888642 |
tgatc-tcaaatctaaggtcatggtttattgagttgatggtaattttggtggttgttggtgatgggtatcacaggtggtggt-tgttggtgttgagttgg |
12888545 |
T |
 |
| Q |
247 |
gaggcgaaatgttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatgatg |
314 |
Q |
| |
|
|||||||| ||| | ||||||||||| ||||| ||||||||||| |||||| ||||||||||||| |
|
|
| T |
12888544 |
gaggcgaa--gtttactgtctctttcttgtgtg-tggtgagttca--agtgtggcgatgatgatgatg |
12888482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4329411 - 4329466
Alignment:
| Q |
1 |
cttcttcttgctgtgttgtggtgggggtgcagagtagaaaaagtggtggtgctgtt |
56 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4329411 |
cttcttcttgctgtgttgtggtgggggtgcagagtagaaaaagtggtggtgttgtt |
4329466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 58 - 310
Target Start/End: Complemental strand, 36934728 - 36934480
Alignment:
| Q |
58 |
tttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatcttca |
156 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||| ||||||| |||| |||||| | |||| |||||| |||||||||| || ||||||||||||||| |
|
|
| T |
36934728 |
tttttggtgaagtttcgaagggaggtgatgcagggagtggtgctgctatcttgggtgatgtccaagtggtggtgatgcagcctgagtgtggtgatcttca |
36934629 |
T |
 |
| Q |
157 |
aatctaaggtcatggtttatgatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcgaaat |
256 |
Q |
| |
|
||| ||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||| |||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
36934628 |
gatcgaaggtcatggtttat-tgttgatggtaattttggtggttgttggtgatgggtatcacaagtggtggtg-tttggtgttgagttgggaggcgaaat |
36934531 |
T |
 |
| Q |
257 |
gttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgat |
310 |
Q |
| |
|
|||| ||||||| || |||| |||||||||| | ||||||| ||||||||| |
|
|
| T |
36934530 |
attcactgtctct---tcttgtggtggtgagttcggaggtgtggcgatgatgat |
36934480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 5892663 - 5892772
Alignment:
| Q |
180 |
ttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtg |
279 |
Q |
| |
|
|||||||||||||||||| | ||||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
5892663 |
ttgatggtgattttggtgttcgttagtgatgggtatcacaagtggtggtg-tttggtgttaagttgggaggcgaaatgttcactgtctctttcttgtgtg |
5892761 |
T |
 |
| Q |
280 |
atggtgagttc |
290 |
Q |
| |
|
| |||||||| |
|
|
| T |
5892762 |
gttgtgagttc |
5892772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 5888807 - 5888932
Alignment:
| Q |
49 |
gtgctgttgtttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtgg |
147 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||| |||| |||||||||||| |||||| | |||| |||||| ||||||| ||||| | ||||| |
|
|
| T |
5888807 |
gtgctgctgtttttggtgaagtttcgaatggaggtgctgcatagagtggtgttgctatcttgggtgatgtccaagtggtggtgatgtagtctgcatgtgg |
5888906 |
T |
 |
| Q |
148 |
tgatcttcaaatctaaggtcatggtt |
173 |
Q |
| |
|
||||||||| |||||||||| ||||| |
|
|
| T |
5888907 |
tgatcttcatatctaaggtcgtggtt |
5888932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 314
Target Start/End: Complemental strand, 22697031 - 22696779
Alignment:
| Q |
56 |
tgtttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatctt |
154 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| ||| || ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
22697031 |
tgtttttggtgaagttttgaatggaggtgatgtagggagcagtgttgctgtcttgggtgatgtccaagtggcggtgatgcagtctacgtgtggtgatc-t |
22696933 |
T |
 |
| Q |
155 |
caaatctaaggtcatggttta-tgatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcga |
253 |
Q |
| |
|
|| |||||||||||||| ||| ||| |||||||||| |||||||| ||||| |||||||| ||||||||| | ||| |||| || |||||||||| |
|
|
| T |
22696932 |
cagatctaaggtcatggattattgagttgatggtga------tggttgttggtgatcggtatcacaagtggtggt-tgttggtgtttagctgggaggcga |
22696840 |
T |
 |
| Q |
254 |
aatgttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatgatg |
314 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||||||| ||||||||| |||||| |||||| |
|
|
| T |
22696839 |
aatgttcactgtctctttcttgtgtggtggtgagtttgggggtgtggcgatgatcatgatg |
22696779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 34501274 - 34501419
Alignment:
| Q |
58 |
tttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatcttca |
156 |
Q |
| |
|
|||||||| ||||||||||||||||||||| || ||||||||||||||||||| | |||| |||||| |||||||||||| ||||||||| |
|
|
| T |
34501274 |
tttttggtgaagtttcgaatggaggtgatgttgggagtggtgttgctgtcttgggtgatgtccaagtggtagtgatgcagtctgcgtgtggtg------- |
34501366 |
T |
 |
| Q |
157 |
aatctaaggtcatggttta-tgatttgatggtgattttggtggttgttagtgat |
209 |
Q |
| |
|
|| |||||||||||| || ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
34501367 |
-atataaggtcatggtatattgagttgatggtgattttagtggttgttggtgat |
34501419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 34502714 - 34502813
Alignment:
| Q |
212 |
gtatcacgagtggtggtgttttgatgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatg |
311 |
Q |
| |
|
||||||| ||||||||| | ||| ||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| |||||||| |||||||||| |
|
|
| T |
34502714 |
gtatcacaagtggtggt-tgttgctgttgagttgggaggcgaa--gtttactgtctctttcttctgtggtggtgagtttgagggtgtggagatgatgatg |
34502810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 53 - 314
Target Start/End: Complemental strand, 49359049 - 49358791
Alignment:
| Q |
53 |
tgttgtttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgat |
151 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||| ||| | |||| || ||||||||| | |||| |||||| ||||||||| | ||||||||||| |
|
|
| T |
49359049 |
tgttgtttttggtgaagtttcgaatgaaggtgatgtagggaatggtcttcctgtcttgggtgatgtccaagtgg---tgatgcagtttgcgtgtggtgat |
49358953 |
T |
 |
| Q |
152 |
cttcaaatctaaggtcatggtttatgat-ttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggagg |
250 |
Q |
| |
|
| || ||||||||| ||||||||| | || ||||||||||||||||||||| ||||| |||||||| ||||||||| ||||| ||||||| ||| ||| |
|
|
| T |
49358952 |
at-cagatctaaggttatggtttattaagttcatggtgattttggtggttgttggtgatgggtatcacaagtggtggt-ttttggtgttgaggtggaagg |
49358855 |
T |
 |
| Q |
251 |
cgaaatgttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatgatg |
314 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
49358854 |
cgaaatgttcactgtctctttcttgtgtggcggtgagttcaggggtgtggcgatgatgatgatg |
49358791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 66 - 314
Target Start/End: Complemental strand, 36593378 - 36593137
Alignment:
| Q |
66 |
aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatcttcaaatctaagg |
165 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||| | |||| |||||| ||||||| ||||| || |||||||| ||| |||||||| |
|
|
| T |
36593378 |
aagtttcgaatggaggtgatgcagggagtggtgttgctgttttggatgatgtccaagtggtggtgatgtagtctgtgtttggtgatc-tcagatctaagg |
36593280 |
T |
 |
| Q |
166 |
tcatggttta-tgatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcgaaatgttcaatg |
264 |
Q |
| |
|
|||||| ||| ||| |||||||| ||||||||||||||| ||||| |||||||| |||||||| ||| ||||||||||||||||||| ||| | || |
|
|
| T |
36593279 |
tcatggattattgagttgatggttattttggtggttgtttgtgatgggtatcacaagtggtgg----ttggtgttgagttgggaggcgaa--gtttactg |
36593186 |
T |
 |
| Q |
265 |
tctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatgatg |
314 |
Q |
| |
|
||||||||| ||| | ||| |||||| |||||| || ||||||||||||| |
|
|
| T |
36593185 |
tctctttcttgtg-ggtggggagttcgggggtggggcgatgatgatgatg |
36593137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 66 - 314
Target Start/End: Original strand, 38149108 - 38149351
Alignment:
| Q |
66 |
aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatcttcaaatctaagg |
165 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||| | |||| ||||| | ||| ||||| ||||||||||||| || |||||||| ||| |||||||| |
|
|
| T |
38149108 |
aagttttgaatggaggtgatgcagggagtggtgcttctgttttggatgatgtgacagtggtggtgatgcagtctgtgtttggtgatc-tcagatctaagg |
38149206 |
T |
 |
| Q |
166 |
tcatggttta-tgatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcgaaatgttcaatg |
264 |
Q |
| |
|
|||||||||| ||| |||||||| ||||||||||||||| ||||| ||||||| |||||||| ||| ||||||||||||||||||| ||| | || |
|
|
| T |
38149207 |
tcatggtttattgagttgatggttattttggtggttgttggtgatgagtatcacaagtggtgg----ttggtgttgagttgggaggcgaa--gtttattg |
38149300 |
T |
 |
| Q |
265 |
tctctttctcgtgtgatggtgagttc-aggggtgtggtgatgatgatgatg |
314 |
Q |
| |
|
||||||||| ||||| |||||||||| ||||||||| ||||||||||||| |
|
|
| T |
38149301 |
tctctttcttgtgtggtggtgagttcggggggtgtggcgatgatgatgatg |
38149351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 314
Target Start/End: Original strand, 32919104 - 32919344
Alignment:
| Q |
66 |
aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatcttcaaatctaagg |
165 |
Q |
| |
|
||||||||||||||||||||||| | |||| || |||||| ||||| | ||| |||||| ||||||||||||| || ||||||||| || |||||||| |
|
|
| T |
32919104 |
aagtttcgaatggaggtgatgcaaggagtg-tgctgctgttttggatgatgttcaagtggtggtgatgcagtctgtgtttggtgatct-catatctaagg |
32919201 |
T |
 |
| Q |
166 |
tcatggtttat-gatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcgaaatgttcaatg |
264 |
Q |
| |
|
|||| ||||| || |||||||| |||| |||||||||| ||||| |||||||| |||||||| ||| ||||||||||||||||||| ||||| | |
|
|
| T |
32919202 |
tcataatttattgagttgatggttattt-ggtggttgttggtgatgggtatcacaagtggtgg----ttggtgttgagttgggaggcgaa--gttcacta |
32919294 |
T |
 |
| Q |
265 |
tctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatgatg |
314 |
Q |
| |
|
||||||||| ||||| |||||||||| |||||||| |||||||||||| |
|
|
| T |
32919295 |
tctctttcttgtgtggtggtgagttcgtgggtgtggcaatgatgatgatg |
32919344 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 312
Target Start/End: Complemental strand, 20519489 - 20519238
Alignment:
| Q |
56 |
tgtttttggt-aagtttcgaatggaggtgatgcaggaagtggtgttgctgtcttggacggtgtctaagtggcggtgatgcagtctacgtgtggtgatctt |
154 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| ||| ||| |||||||||| || | | |||| |||||| |||||| ||||| ||| | ||||||| |
|
|
| T |
20519489 |
tgtttttggtgaagttttgaatggaggtgatgtagggagtagtgttgctgttttaggtgatgtccaagtggtggtgattgagtctgcgttttgtgatct- |
20519391 |
T |
 |
| Q |
155 |
caaatctaaggtcatggtttatgat-ttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcga |
253 |
Q |
| |
|
|| ||||||| |||||||| || | ||||||| |||||||||||||||| ||||| ||||||| ||||||||| || |||||||||||||||||| |
|
|
| T |
20519390 |
cagatctaagatcatggttgattgtgttgatggagattttggtggttgttggtgatgggtatcataagtggtggt----tggtgttgagttgggaggcga |
20519295 |
T |
 |
| Q |
254 |
aatgttcaatgtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgatga |
312 |
Q |
| |
|
| ||| | ||||||||||| ||||| |||||||||| ||||| ||| ||||||||||| |
|
|
| T |
20519294 |
a--gtttattgtctctttcttgtgtggtggtgagttcgggggtatggcgatgatgatga |
20519238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 32946613 - 32946756
Alignment:
| Q |
165 |
gtcatggtttat-gatttgatggtgattttggtggttgttagtgataggtatcacgagtggtggtgttttgatgttgagttgggaggcgaaatgttcaat |
263 |
Q |
| |
|
|||||||||||| || || ||||| ||||||||||||||| |||||| ||||||| ||||||||| | |||||||||| ||||||||||||||||||| |
|
|
| T |
32946613 |
gtcatggtttattgagttaatggtaattttggtggttgttggtgatatgtatcacaagtggtggt-tgttgatgttgatttgggaggcgaaatgttcacc |
32946711 |
T |
 |
| Q |
264 |
gtctctttctcgtgtgatggtgagttcaggggtgtggtgatgatgat |
310 |
Q |
| |
|
| ||||||| ||||| |||||||||| ||||||||||| |||||| |
|
|
| T |
32946712 |
g--tctttcttgtgtggtggtgagttcgtgggtgtggtgacgatgat |
32946756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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